Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0005351

Physical Location & Seq

Genomic Coordinates Forward (+)

11951135 .. 11961392

Gene Structure 10258 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g19740.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2931 bp

ATGCCCGGATTATCCTGCACCAAGCTGACCCTCTTCACCGTCGCCGGAGTCGCAATCCAACTCGTCGGCCTCTCTCTCTTCGTCTTCGGCTTCTTCCCCGTCAAGCCTACCCTTCCTGGCCACAGTGGTCCGGAGAGTTTTGAAGAACCCACTTGCAATTCAAATCGAAATGAGAGCCAGAGTGATGTGCCTCCTCATCAGCTCAGGTCACTCTATAAGGAACTATCTGGAATCCCACCTGCATTTGACAGGCTTATACTGATGGTTATTGATGGTCTTCCGGCTGAGTTTGTTCTAGGCAAGGATGGTGAGCCTCCAAACAAGAACTTGATGGAGGCTATGCCGTATACTCAGTCACTGCTTGGAAATGGGATGGCAGTTGGGTACCATGCTAAAGCCGCACCTCCAACTGTTACAATGCCACGTTTGAAGGCTATGGTTTCTGGAGCAATTGGGGGATTCCTTGATGTGGCTTTGAATTTTAACACACAAGCTATGGTGGATGACAATCTTCTGGGCCAGTTTTTCAAGATTGGGTGGAAAATGGTGATGCTCGGTGATGAAACATGGCTCAAGTTGTTTCCAGGATTATTTATGAGGCATGATGGAGTCAGCAGTTTCTTTGTCAAAGATACAGTACAGGTGGATCAAAATGTTTCTCGACATCTCAGTCATGAGCTTAGCAGAGATGACTGGGATTTTCTGATTCTTCATTATCTGGGATTAGATCATGTTGGACATACTGGTGGCCGCAACAGTGCCTTGATGGCCCCAAAACTTACAGAGATGGATGATGTGGTCAAGATGATTCATATGACTAATATAGTGAATCAAAAGAATGGTCAAGGAAAGACACTCTTGGTCATAGTAAGTGACCATGGCATGACTGAGAGTGGTAATCATGGAGGGTCCTCATATGAAGAAACAGACTCCTTAGCACTATTTATTGGCCTGAAAAATGATGTCTCTGATTATTTGTCGTCTACCCATAACAATATTTACCAGGTTGACATTGCACCAACTTTAGCTCTACTATTAGGCGTGCCAATTCCAAAGAACAATGTTGGTGTCCTGATTCCAGAAATCTTTGGGTCTTTGAGTGAAGACCAACAGCTGAAGGCACTGGAGCTGAATTCCTGGCAATTACTTAGATTATTGCAAGCACAAATACCTGGTTTATCATGTCGAAATCATCCATATGATGGCTCAGGTGGTGATCAAGAGTCCAGAATAACCAAGTGTTATGGGAGTATTGAAAGGATATGCTGCTGCTTATATACAAATGCTGCTCTTCTCAAAAAGTCCTGGATGTCTAAGGAAGTCTCCAGGTATAATAGTAGGAAAGACTACACCAGCAGTGTTGCAGCATACTATGAGTTTCTGAGAACTGCAAGTGAGTGGCTATCACGCAGAGCAACTGATAAACCTGTAAGCCTGCTTACTTTTGGCATAGTGGCAATGCTCCTATCTTGTCTGATACTGTTAAGCCTTCTGTTTCGCATCTACAAAGAAGCCCACACTAGAGAGATGCAATGTCTTTTTGACTTGAAGAGCATCATGCAGACCTGGTGTCTAGAAGAGACTTTTGTATTGGGTGTTATAATGATTCTCATTGTATGTATGACATCAAGTTCTTTGGTAGAGGAAGAGCAGTATATTTGGCATTTCATGGCTTCCACATTGCAGTTGATATGTTTGCGTAAAGCAATGCAAAGTAGTGTACATAGTTATTCCAAGGGACAAAACAAGAGAAGTGGTCTTCAAATGAGTTCCGTCTTTGTGCTTCTCATTTCTGGGAGGATATTGAGAGGTTGGCACCAAGGCGGCGTGAATTGGATTAATCTTCCTGACATATCCAAGTGGCTTGAGCAGGCTGGGAACAATAATGTAAAATCAGTTCAGCTAGTCACATGCCTTCTAGTGATCGCCTTAAGCTTCTACGCTCTCTTTTTATATGGATCAAACAAAAATATAGTTCTGGTCATTGGATTTAGCTTTCTTATGTCTGGGTTGTTGGTTTTGCAACATATCCTCAAACATCAGGATGAGATGTTTGGGGCATCCAGTCACAGTTCTACTGCATTGGTACAAATGATTTATGCAGTCCTGAGTGTTTCCACAAGTGGGACAGTTATTTCCTTGCCATGGCTTGTACCAATTTCAATATCTGAGACCTACTTGAGTCATGATGCGTATATGTCGACATCTGCTCCCAGTGAAGTCCAGAATAAGTCACTGCTGGTGCAGTTGAGAGAATGTTTATATGTAATTGGGTGGGCATACATATCCTGCTGGTGTCTTCTGCAGCTTTTGCTCCAACAGACAGTTAACTCAATGCCTATACTCCTGCTACTTGTGCAAACTTTGGCCAGCATGATGTATTTTTCGTATAATGGGCGGCACCACAAGCAGTGGGTTGAGGTTTCTGCATTTTACTTTTTGGGAATGGCAGGCCATTATGCTTTAGGGAACAGCAATTCTCTAGCTACTATTGATGTTGCCGGAGCTTTTATTGGCATCTCAAGTCACTCGACAGTACTTTCTGGAATTTTAATGTTCATTATCACCTATGCTTCCCCAATGCTATTTATTCTTAGCATGGTGATGTATATCTCTTTGAAGGATACAAGCTATTTCATATCTCCGTCTGATGCAGATTCAAGACAACTACTCAAAATGATTATTGGCTTTCCTTGTCTAGTTCCACTGGGCTTGGACTCCATTCTATTGACAGTGTACACCATCGTATTGTTGGTTATGAGGAACCATCTTTACATTTGGAGCGTCTTTTCTCCAAAGTACATTTATGTTTGTACTACCACCGTATGTGTATACATTGGGGTCTCTGTTGTAGCTGCAACTGTGACATATGCATATTCGGTGCTGGGGTTGAGGATAAATAAGCAATTTAAGCTTAGCCATCAGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006497 GO:0006505 GO:0006506 GO:0006629 GO:0006643 GO:0006644 GO:0006650 GO:0006661 GO:0006664 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0016254 GO:0016740 GO:0016772 GO:0016780 GO:0019538 GO:0019637 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0034645 GO:0036211 GO:0042157 GO:0042158 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046467 GO:0046474 GO:0046486 GO:0046488 GO:0051267 GO:0051377 GO:0071704 GO:0090407 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00563 map00563

Pfam Domains

Protein Families

Phosphodiest

Protein Analysis

977

Amino Acids

108.46

Weight (kDa)

6.84

Isoelectric Point (pI)

47.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphodiest	PF01663	216 - 298	1.9e-08	Type I phosphodiesterase / nucleotide pyrophosphatase
PIGO_PIGG	PF19316	526 - 633	3.2e-07	GPI ethanolamine phosphate transferase membrane region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22530
fragaria_vesca	FvH4_1g19740 FvH4_1g19740 FvH4_1g19740 FvH4_1g19740 FvH4_1g19740 FvH4_1g19740
malus_domestica	MD15G1313700.v1.1
prunus_persica	Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1 Prupe.6G198700_v2.0.a1
pyrus_communis	pycom15g27700
rosa_chinensis	RchiOBHm_Chr2g0111321
rosa_laevigata	RLG00000017886
rosa_multiflora	Rmu_sc0001363.1_g000002 Rmu_sc0005033.1_g000002 Rmu_ssc0000075.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132500
rosa_rugosa	Rorug02G0172800
rosa_samantha	Rh2AG225900 Rh2BG237700 Rh2CG228900 Rh2DG233400
rosa_wichuraiana	Rw2G017440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1601
AarI	CACCTGC	1 cut(s)	247
AasI	GACNNNNNNGTC	1 cut(s)	669
Acc36I	ACCTGC	1 cut(s)	247
Acc65I	GGTACC	1 cut(s)	384
AccB1I	GGYRCC	3 cut(s)	384, 1815, 2400
AccB7I	CCANNNNNTGG	1 cut(s)	1202
AccI	GTMKAC	4 cut(s)	347, 983, 2201, 2832
AccIII	TCCGGA	1 cut(s)	130
AciI	CCGC	4 cut(s)	399, 751, 1824, 2398
AclWI	GGATC	2 cut(s)	654, 1966
AcoI	YGGCCR	3 cut(s)	118, 748, 2367
AcsI	RAATTY	3 cut(s)	478, 1132, 2547
AcuI	CTGAAG	1 cut(s)	1136
AfaI	GTAC	9 cut(s)	386, 639, 1722, 2088, 2154, 2538, 2738, 2801, 2815
AfiI	CCNNNNNNNGG	4 cut(s)	469, 1202, 2124, 2145
AflII	CTTAAG	1 cut(s)	1930
AhdI	GACNNNNNGTC	1 cut(s)	1569
AjnI	CCWGG	8 cut(s)	115, 583, 1002, 1136, 1171, 1304, 1325, 1565
Alw26I	GTCTC	5 cut(s)	970, 1327, 1574, 2165, 2848
AlwI	GGATC	2 cut(s)	654, 1966
AlwNI	CAGNNNCTG	1 cut(s)	358
Aor13HI	TCCGGA	1 cut(s)	130
AoxI	GGCC	8 cut(s)	67, 118, 517, 748, 768, 949, 2367, 2452
ApeKI	GCWGC	6 cut(s)	1266, 1269, 1286, 1364, 2305, 2855
ApoI	RAATTY	3 cut(s)	478, 1132, 2547
ArsI	GACNNNNNNTTYG	2 cut(s)	826, 858
AseI	ATTAAT	1 cut(s)	1839
Asp718I	GGTACC	1 cut(s)	384
AspS9I	GGNCC	4 cut(s)	128, 517, 769, 909
AsuC2I	CCSGG	1 cut(s)	6
AsuHPI	GGTGA	7 cut(s)	28, 320, 559, 569, 1226, 2557, 2614
AvaII	GGWCC	2 cut(s)	128, 909
BalI	TGGCCA	2 cut(s)	120, 2369
BanI	GGYRCC	3 cut(s)	384, 1815, 2400
BbsI	GAAGAC	5 cut(s)	76, 269, 1110, 1751, 2291
BbvI	GCAGC	6 cut(s)	1253, 1256, 1273, 1376, 2317, 2842
BceAI	ACGGC	1 cut(s)	328
BciT130I	CCWGG	8 cut(s)	117, 585, 1004, 1138, 1173, 1306, 1327, 1567
BciVI	GTATCC	1 cut(s)	2617
BclI	TGATCA	1 cut(s)	1216
BcnI	CCSGG	1 cut(s)	6
BcoDI	GTCTC	5 cut(s)	970, 1327, 1574, 2165, 2848
BfaI	CTAG	7 cut(s)	296, 1521, 1574, 1904, 1919, 2483, 2699
BfmI	CTRYAG	1 cut(s)	2303
BfrI	CTTAAG	1 cut(s)	1930
BfuAI	ACCTGC	1 cut(s)	247
BfuI	GTATCC	1 cut(s)	2617
BglI	GCCNNNNNGGC	1 cut(s)	767
BlpI	GCTNAGC	2 cut(s)	680, 2915
BmcAI	AGTACT	1 cut(s)	2538
Bme1390I	CCNGG	9 cut(s)	6, 117, 585, 1004, 1138, 1173, 1306, 1327, 1567
Bme18I	GGWCC	2 cut(s)	128, 909
BmeRI	GACNNNNNGTC	1 cut(s)	1569
BmgT120I	GGNCC	4 cut(s)	128, 517, 769, 909
BmiI	GGNNCC	6 cut(s)	386, 771, 910, 1817, 2402, 2765
BmrFI	CCNGG	9 cut(s)	6, 117, 585, 1004, 1138, 1173, 1306, 1327, 1567
BmrI	ACTGGG	3 cut(s)	703, 2208, 2717
BmsI	GCATC	8 cut(s)	540, 1509, 1518, 1563, 2069, 2179, 2526, 2641
BmuI	ACTGGG	3 cut(s)	703, 2208, 2717
BpiI	GAAGAC	5 cut(s)	76, 269, 1110, 1751, 2291
BpmI	CTGGAG	3 cut(s)	465, 1145, 1309
Bpu10I	CCTNAGC	3 cut(s)	203, 934, 1207
Bpu1102I	GCTNAGC	2 cut(s)	680, 2915
BpuEI	CTTGAG	4 cut(s)	557, 1886, 2200, 2506
BpuMI	CCSGG	1 cut(s)	6
BsaBI	GATNNNNATC	2 cut(s)	507, 2609
BsaI	GGTCTC	2 cut(s)	2165, 2848
BsaJI	CCNNGG	4 cut(s)	877, 1734, 1819, 2144
BsaWI	WCCGGW	1 cut(s)	130
BsaXI	ACNNNNNCTCC	2 cut(s)	2194, 2224
Bsc4I	CCNNNNNNNGG	4 cut(s)	469, 1202, 2124, 2145
Bse1I	ACTGG	7 cut(s)	520, 698, 748, 1128, 2064, 2214, 2712
Bse3DI	GCAATG	5 cut(s)	1011, 1464, 1538, 1679, 1713
Bse8I	GATNNNNATC	2 cut(s)	507, 2609
BseAI	TCCGGA	1 cut(s)	130
BseBI	CCWGG	8 cut(s)	117, 585, 1004, 1138, 1173, 1306, 1327, 1567
BseDI	CCNNGG	4 cut(s)	877, 1734, 1819, 2144
BseGI	GGATG	8 cut(s)	310, 378, 508, 796, 1192, 1314, 2050, 2060
BseJI	GATNNNNATC	2 cut(s)	507, 2609
BseLI	CCNNNNNNNGG	4 cut(s)	469, 1202, 2124, 2145
BseMI	GCAATG	5 cut(s)	1011, 1464, 1538, 1679, 1713
BseMII	CTCAG	9 cut(s)	217, 276, 365, 682, 879, 1221, 1373, 2099, 2160
BseNI	ACTGG	7 cut(s)	520, 698, 748, 1128, 2064, 2214, 2712
BseRI	GAGGAG	1 cut(s)	183
BseXI	GCAGC	6 cut(s)	1253, 1256, 1273, 1376, 2317, 2842
BseYI	CCCAGC	2 cut(s)	1874, 2884
BsgI	GTGCAG	1 cut(s)	2264
BshFI	GGCC	8 cut(s)	69, 120, 519, 750, 770, 951, 2369, 2454
BshNI	GGYRCC	3 cut(s)	384, 1815, 2400
BsiSI	CCGG	5 cut(s)	6, 45, 131, 281, 2502
BslFI	GGGAC	2 cut(s)	1752, 2140
BslI	CCNNNNNNNGG	4 cut(s)	469, 1202, 2124, 2145
BsmAI	GTCTC	5 cut(s)	970, 1327, 1574, 2165, 2848
BsmFI	GGGAC	2 cut(s)	1752, 2140
BsnI	GGCC	8 cut(s)	69, 120, 519, 750, 770, 951, 2369, 2454
Bso31I	GGTCTC	2 cut(s)	2165, 2848
Bsp13I	TCCGGA	1 cut(s)	130
Bsp1407I	TGTACA	2 cut(s)	1720, 2736
Bsp143I	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
Bsp1720I	GCTNAGC	2 cut(s)	680, 2915
Bsp19I	CCATGG	2 cut(s)	877, 2144
BspACI	CCGC	4 cut(s)	399, 751, 1824, 2398
BspANI	GGCC	8 cut(s)	69, 120, 519, 750, 770, 951, 2369, 2454
BspCNI	CTCAG	9 cut(s)	216, 277, 364, 681, 880, 1220, 1374, 2100, 2161
BspEI	TCCGGA	1 cut(s)	130
BspHI	TCATGA	2 cut(s)	673, 2185
BspLI	GGNNCC	6 cut(s)	386, 771, 910, 1817, 2402, 2765
BspMAI	CTGCAG	1 cut(s)	2307
BspMI	ACCTGC	1 cut(s)	247
BspPI	GGATC	2 cut(s)	654, 1966
BspQI	GCTCTTC	3 cut(s)	1296, 1544, 1641
BspT107I	GGYRCC	3 cut(s)	384, 1815, 2400
BspTI	CTTAAG	1 cut(s)	1930
BspTNI	GGTCTC	2 cut(s)	2165, 2848
BsrDI	GCAATG	5 cut(s)	1011, 1464, 1538, 1679, 1713
BsrGI	TGTACA	2 cut(s)	1720, 2736
BsrI	ACTGG	7 cut(s)	520, 698, 748, 1128, 2064, 2214, 2712
BssECI	CCNNGG	4 cut(s)	877, 1734, 1819, 2144
BssMI	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
BssNAI	GTATAC	2 cut(s)	348, 2833
BssT1I	CCWWGG	4 cut(s)	877, 1734, 1819, 2144
Bst1107I	GTATAC	2 cut(s)	348, 2833
Bst2UI	CCWGG	8 cut(s)	117, 585, 1004, 1138, 1173, 1306, 1327, 1567
Bst6I	CTCTTC	6 cut(s)	38, 83, 1296, 1544, 1572, 1641
BstAFI	CTTAAG	1 cut(s)	1930
BstAPI	GCANNNNNTGC	1 cut(s)	2311
BstAUI	TGTACA	2 cut(s)	1720, 2736
BstC8I	GCNNGC	6 cut(s)	1043, 1161, 1436, 1872, 2371, 2452
BstDSI	CCRYGG	2 cut(s)	877, 2144
BstF5I	GGATG	8 cut(s)	310, 378, 508, 796, 1192, 1314, 2050, 2060
BstKTI	GATC	5 cut(s)	649, 730, 1219, 1926, 1961
BstMAI	GTCTC	5 cut(s)	970, 1327, 1574, 2165, 2848
BstMBI	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
BstMWI	GCNNNNNNNGC	7 cut(s)	50, 398, 767, 2311, 2356, 2407, 2911
BstNI	CCWGG	8 cut(s)	117, 585, 1004, 1138, 1173, 1306, 1327, 1567
BstNSI	RCATGY	1 cut(s)	1914
BstSCI	CCNGG	9 cut(s)	4, 115, 583, 1002, 1136, 1171, 1304, 1325, 1565
BstSFI	CTRYAG	1 cut(s)	2303
BstV1I	GCAGC	6 cut(s)	1253, 1256, 1273, 1376, 2317, 2842
BstV2I	GAAGAC	5 cut(s)	76, 269, 1110, 1751, 2291
BstZ17I	GTATAC	2 cut(s)	348, 2833
BsuI	GTATCC	1 cut(s)	2617
BsuRI	GGCC	8 cut(s)	69, 120, 519, 750, 770, 951, 2369, 2454
BtgI	CCRYGG	2 cut(s)	877, 2144
BtsCI	GGATG	8 cut(s)	310, 378, 508, 796, 1192, 1314, 2050, 2060
BtsI	GCAGTG	4 cut(s)	356, 1363, 2234, 2417
BveI	ACCTGC	1 cut(s)	247
Cac8I	GCNNGC	6 cut(s)	1043, 1161, 1436, 1872, 2371, 2452
CaiI	CAGNNNCTG	1 cut(s)	358
CciI	TCATGA	2 cut(s)	673, 2185
Cfr13I	GGNCC	4 cut(s)	128, 517, 769, 909
CseI	GACGC	1 cut(s)	2773
CsiI	ACCWGGT	3 cut(s)	1002, 1171, 1565
Csp6I	GTAC	9 cut(s)	385, 638, 1721, 2087, 2153, 2537, 2737, 2800, 2814
CspCI	CAANNNNNGTGG	4 cut(s)	1735, 1770, 2694, 2729
CviQI	GTAC	9 cut(s)	385, 638, 1721, 2087, 2153, 2537, 2737, 2800, 2814
DpnI	GATC	5 cut(s)	648, 729, 1218, 1925, 1960
DpnII	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
DrdI	GACNNNNNNGTC	1 cut(s)	669
DriI	GACNNNNNGTC	1 cut(s)	1569
DseDI	GACNNNNNNGTC	1 cut(s)	669
EaeI	YGGCCR	3 cut(s)	118, 748, 2367
Eam1104I	CTCTTC	6 cut(s)	38, 83, 1296, 1544, 1572, 1641
Eam1105I	GACNNNNNGTC	1 cut(s)	1569
EarI	CTCTTC	6 cut(s)	38, 83, 1296, 1544, 1572, 1641
Eco130I	CCWWGG	4 cut(s)	877, 1734, 1819, 2144
Eco31I	GGTCTC	2 cut(s)	2165, 2848
Eco47I	GGWCC	2 cut(s)	128, 909
Eco57I	CTGAAG	1 cut(s)	1136
EcoO109I	RGGNCCY	1 cut(s)	909
EcoRI	GAATTC	1 cut(s)	1132
EcoRII	CCWGG	8 cut(s)	115, 583, 1002, 1136, 1171, 1304, 1325, 1565
EcoT14I	CCWWGG	4 cut(s)	877, 1734, 1819, 2144
EcoT22I	ATGCAT	1 cut(s)	2875
ErhI	CCWWGG	4 cut(s)	877, 1734, 1819, 2144
FalI	AAGNNNNNCTT	2 cut(s)	842, 874
FaqI	GGGAC	2 cut(s)	1752, 2140
FauNDI	CATATG	4 cut(s)	813, 916, 1198, 2869
FbaI	TGATCA	1 cut(s)	1216
FblI	GTMKAC	4 cut(s)	347, 983, 2201, 2832
FokI	GGATG	8 cut(s)	317, 385, 515, 803, 1179, 1321, 2047, 2057
FspBI	CTAG	7 cut(s)	296, 1521, 1574, 1904, 1919, 2483, 2699
GsaI	CCCAGC	2 cut(s)	1878, 2888
GsuI	CTGGAG	3 cut(s)	465, 1145, 1309
HaeIII	GGCC	8 cut(s)	69, 120, 519, 750, 770, 951, 2369, 2454
HapII	CCGG	5 cut(s)	6, 45, 131, 281, 2502
HgaI	GACGC	1 cut(s)	2773
HincII	GTYRAC	3 cut(s)	1009, 2202, 2329
HindII	GTYRAC	3 cut(s)	1009, 2202, 2329
HindIII	AAGCTT	2 cut(s)	1933, 2912
HpaI	GTTAAC	1 cut(s)	2329
HpaII	CCGG	5 cut(s)	6, 45, 131, 281, 2502
HphI	GGTGA	7 cut(s)	28, 320, 559, 569, 1226, 2557, 2614
Hpy166II	GTNNAC	9 cut(s)	348, 984, 1009, 1721, 2202, 2329, 2737, 2739, 2833
Hpy188I	TCNGA	6 cut(s)	705, 970, 1383, 1476, 2170, 2650
Hpy8I	GTNNAC	9 cut(s)	348, 984, 1009, 1721, 2202, 2329, 2737, 2739, 2833
Hpy99I	CGWCG	2 cut(s)	44, 68
HpyAV	CCTTC	6 cut(s)	122, 424, 1111, 1499, 1925, 2614
HpyCH4IV	ACGT	1 cut(s)	424
HpyF10VI	GCNNNNNNNGC	7 cut(s)	50, 398, 767, 2311, 2356, 2407, 2911
HpySE526I	ACGT	1 cut(s)	424
Kpn2I	TCCGGA	1 cut(s)	130
KpnI	GGTACC	1 cut(s)	388
Ksp22I	TGATCA	1 cut(s)	1216
KspAI	GTTAAC	1 cut(s)	2329
Kzo9I	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
LguI	GCTCTTC	3 cut(s)	1296, 1544, 1641
LmnI	GCTCC	7 cut(s)	446, 1126, 1467, 2215, 2319, 2504, 2781
Lsp1109I	GCAGC	6 cut(s)	1253, 1256, 1273, 1376, 2317, 2842
LweI	GCATC	8 cut(s)	540, 1509, 1518, 1563, 2069, 2179, 2526, 2641
MabI	ACCWGGT	3 cut(s)	1002, 1171, 1565
MaeI	CTAG	7 cut(s)	296, 1521, 1574, 1904, 1919, 2483, 2699
MaeII	ACGT	1 cut(s)	424
MaeIII	GTNAC	9 cut(s)	207, 354, 412, 872, 1906, 2066, 2232, 2525, 2863
MalI	GATC	5 cut(s)	648, 729, 1218, 1925, 1960
MboI	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
MfeI	CAATTG	1 cut(s)	450
MlsI	TGGCCA	2 cut(s)	120, 2369
MluNI	TGGCCA	2 cut(s)	120, 2369
MlyI	GAGTC	6 cut(s)	57, 618, 923, 1232, 2191, 2711
MmeI	TCCRAC	4 cut(s)	82, 431, 715, 2341
Mox20I	TGGCCA	2 cut(s)	120, 2369
Mph1103I	ATGCAT	1 cut(s)	2875
MroI	TCCGGA	1 cut(s)	130
MscI	TGGCCA	2 cut(s)	120, 2369
MseI	TTAA	7 cut(s)	483, 1484, 1839, 1931, 2328, 2552, 2910
MslI	CAYNNNNRTG	4 cut(s)	744, 1197, 2043, 2603
Msp20I	TGGCCA	2 cut(s)	120, 2369
MspA1I	CMGCKG	1 cut(s)	1114
MspCI	CTTAAG	1 cut(s)	1930
MspI	CCGG	5 cut(s)	6, 45, 131, 281, 2502
MspR9I	CCNGG	9 cut(s)	6, 117, 585, 1004, 1138, 1173, 1306, 1327, 1567
MunI	CAATTG	1 cut(s)	450
MvaI	CCWGG	8 cut(s)	117, 585, 1004, 1138, 1173, 1306, 1327, 1567
MwoI	GCNNNNNNNGC	7 cut(s)	50, 398, 767, 2311, 2356, 2407, 2911
NciI	CCSGG	1 cut(s)	6
NcoI	CCATGG	2 cut(s)	877, 2144
NdeI	CATATG	4 cut(s)	813, 916, 1198, 2869
NdeII	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
NlaIV	GGNNCC	6 cut(s)	386, 771, 910, 1817, 2402, 2765
NmuCI	GTSAC	8 cut(s)	207, 354, 872, 1906, 2066, 2232, 2525, 2863
NsiI	ATGCAT	1 cut(s)	2875
NspI	RCATGY	1 cut(s)	1914
PagI	TCATGA	2 cut(s)	673, 2185
PaqCI	CACCTGC	1 cut(s)	247
PciSI	GCTCTTC	3 cut(s)	1296, 1544, 1641
PfeI	GAWTC	8 cut(s)	231, 459, 706, 808, 829, 1075, 1606, 2657
PflMI	CCANNNNNTGG	1 cut(s)	1202
PfoI	TCCNGGA	2 cut(s)	583, 1304
PleI	GAGTC	6 cut(s)	56, 617, 923, 1231, 2190, 2711
PpsI	GAGTC	6 cut(s)	56, 617, 923, 1231, 2190, 2711
PpuMI	RGGWCCY	1 cut(s)	909
PshBI	ATTAAT	1 cut(s)	1839
PsiI	TTATAA	1 cut(s)	1601
Psp5II	RGGWCCY	1 cut(s)	909
Psp6I	CCWGG	8 cut(s)	115, 583, 1002, 1136, 1171, 1304, 1325, 1565
PspFI	CCCAGC	2 cut(s)	1874, 2884
PspGI	CCWGG	8 cut(s)	115, 583, 1002, 1136, 1171, 1304, 1325, 1565
PspN4I	GGNNCC	6 cut(s)	386, 771, 910, 1817, 2402, 2765
PspPI	GGNCC	4 cut(s)	128, 517, 769, 909
PspPPI	RGGWCCY	1 cut(s)	909
PsrI	GAACNNNNNNTAC	4 cut(s)	1881, 1913, 2756, 2788
PstI	CTGCAG	1 cut(s)	2307
PstNI	CAGNNNCTG	1 cut(s)	358
PvuII	CAGCTG	1 cut(s)	1114
RsaI	GTAC	9 cut(s)	386, 639, 1722, 2088, 2154, 2538, 2738, 2801, 2815
RsaNI	GTAC	9 cut(s)	385, 638, 1721, 2087, 2153, 2537, 2737, 2800, 2814
RseI	CAYNNNNRTG	4 cut(s)	744, 1197, 2043, 2603
SalI	GTCGAC	1 cut(s)	2200
SapI	GCTCTTC	3 cut(s)	1296, 1544, 1641
SaqAI	TTAA	7 cut(s)	483, 1484, 1839, 1931, 2328, 2552, 2910
Sau3AI	GATC	5 cut(s)	646, 727, 1216, 1923, 1958
Sau96I	GGNCC	4 cut(s)	128, 517, 769, 909
ScaI	AGTACT	1 cut(s)	2538
SchI	GAGTC	6 cut(s)	57, 618, 923, 1232, 2191, 2711
ScrFI	CCNGG	9 cut(s)	6, 117, 585, 1004, 1138, 1173, 1306, 1327, 1567
SexAI	ACCWGGT	3 cut(s)	1002, 1171, 1565
SfaNI	GCATC	8 cut(s)	540, 1509, 1518, 1563, 2069, 2179, 2526, 2641
SfcI	CTRYAG	1 cut(s)	2303
SinI	GGWCC	2 cut(s)	128, 909
SmiMI	CAYNNNNRTG	4 cut(s)	744, 1197, 2043, 2603
SmlI	CTYRAG	5 cut(s)	572, 1865, 1930, 2179, 2521
SmoI	CTYRAG	5 cut(s)	572, 1865, 1930, 2179, 2521
SsiI	CCGC	4 cut(s)	399, 751, 1824, 2398
SspI	AATATT	1 cut(s)	997
SspMI	CTAG	7 cut(s)	296, 1521, 1574, 1904, 1919, 2483, 2699
StyD4I	CCNGG	9 cut(s)	4, 115, 583, 1002, 1136, 1171, 1304, 1325, 1565
StyI	CCWWGG	4 cut(s)	877, 1734, 1819, 2144
TaiI	ACGT	1 cut(s)	427
TaqI	TCGA	5 cut(s)	166, 661, 1186, 2201, 2531
TatI	WGTACW	6 cut(s)	637, 1720, 2536, 2736, 2799, 2813
TauI	GCSGC	4 cut(s)	401, 753, 1827, 2401
TfiI	GAWTC	8 cut(s)	231, 459, 706, 808, 829, 1075, 1606, 2657
Tru1I	TTAA	7 cut(s)	483, 1484, 1839, 1931, 2328, 2552, 2910
Tru9I	TTAA	7 cut(s)	483, 1484, 1839, 1931, 2328, 2552, 2910
TseFI	GTSAC	8 cut(s)	207, 354, 872, 1906, 2066, 2232, 2525, 2863
TseI	GCWGC	6 cut(s)	1266, 1269, 1286, 1364, 2305, 2855
Tsp45I	GTSAC	8 cut(s)	207, 354, 872, 1906, 2066, 2232, 2525, 2863
TspDTI	ATGAA	7 cut(s)	576, 701, 800, 933, 1657, 2548, 2626
TspGWI	ACGGA	2 cut(s)	1762, 2634
Van91I	CCANNNNNTGG	1 cut(s)	1202
Vha464I	CTTAAG	1 cut(s)	1930
VpaK11BI	GGWCC	2 cut(s)	128, 909
VspI	ATTAAT	1 cut(s)	1839
XapI	RAATTY	3 cut(s)	478, 1132, 2547
XbaI	TCTAGA	1 cut(s)	1573
XceI	RCATGY	1 cut(s)	1914
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2749
XmiI	GTMKAC	4 cut(s)	347, 983, 2201, 2832
XspI	CTAG	7 cut(s)	296, 1521, 1574, 1904, 1919, 2483, 2699
ZrmI	AGTACT	1 cut(s)	2538
Zsp2I	ATGCAT	1 cut(s)	2875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.