FvH4_1g21450

Inositol-3-phosphate

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
13385153 .. 13388404
3252 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g21450.t2

Sequence Viewer

Length: 1533 bp
ATGTTCATTGAGAGCTTTAAGGTCGAGTCCCCTAACGTAGAGTACACTGAGAATGAGATTCATTCTGTGTACACCTACGAGACCACTGAGCTTGTTCATGAGAACAGGAAGGGTACTTATCAGTGGATTGTTAAGCCCAAGTCTGTGAAATACGAATTCAAGACTGATGTGCATGTCCCCAAATTAGGGGTAATGCTTGTGGGATGGGGTGGAAACAATGGCTCAACCCTCACTGCTGGTGTGATTGCTAACAGAGAAGGAATCTCTTGGGCAACCAAGGACAAGGTGCAACAGGCCAATTACTTTGGCTCACTCACACAAGCCTCGTCGATTCGTGTTGGGTCTTTCAATGGGGAAGAGATTTATGCTCCATTCAAGAGCCTTCTTCCCATGGTGAACCCTGATGACATTGTGTTTGGGGGTTGGGACATCAGTGACATGAACTTAGCTGATGCTATGGCCAGGGCTAGAGTCCTGGACATTGATCTGCAAAAGCAGCTCAGGCCTTACATGGAGTCGATGATCCCACTCCCTGGAATCTATGACCCTGATTTCATTGCTGCTAATCAAGGTTCGCGTGCAAACAACGTGATCAAGGGTACTAAGCAGGAACAAGTCCAACAGATCATCAAAGACATTAGAGAGTTCAAGGAGAAGAACAAAGTGGACAAGGTGGTCGTGCTTTGGACTGCCAACACTGAGAGGTACAGTAGTGTGATTGAGGGGCTAAACGACACCGTTGAGAACCTTTTGGGTTCAGTGGAGAAGAATGAAGCTGAGATATCCCCTTCCACCTTGTATGCCATAGCTTGTGTGATGGAAAATGTCCCTTTCATCAATGGAAGCCCACAAAACACATTTGTCCCAGGGCTCATTGATTTGGCTATTAGGAGGAATACTTTGATCGGTGGGGATGACTTTAAGAGTGGTCAGACCAAAATGAAATCTGTTCTGGTTGATTTCCTAGTTGGAGCTGGTATCAAGCCAACATCAATTGTGAGCTACAACCATCTTGGAAACAATGATGGTATGAACCTTTCAGCTCCGCAAACCTTCAGGTCCAAGGAAATTTCCAAGAGCAATGTTGTGGATGATATGGTGTCGAGCAATGGCATCCTCTTCGAGCCTGGTGAGCACCCTGATCACGTTGTGGTGATCAAGTATGTGCCCTATGTGGCTGATAGCAAGAGAGCTATGGATGAGTACACATCTGAGATATTCTTGGGTGGGAGGAACACCATTGTGATGCACAACACCTGTGAGGACTCCCTCTTGGCTGCTCCTATCATTCTGGATTTGGTTCTGCTTGCTGAGCTGAGCACTCGTATCCAGCTCAAATCTGAAGCTGAGGCAAAGTTCCACTCTTTCCACCCTGTGGCTACTATTCTAAGTTACCTCACCAAGGCACCTCTTGTTCCACCAGGTACACCAGTGGTGAATGCACTCTCAAAGCAGAGGGCAATGCTTGAGAACATACTCAGAGCTTGTGTTGGCTTGGCTCCAGAGAACAACATGATCTTGGAGTACAAATGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

511

Amino Acids

56.47

Weight (kDa)

5.38

Isoelectric Point (pI)

35.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_5 PF07994 1 - 344 6e-103 Myo-inositol-1-phosphate synthase
Inos-1-P_synth PF01658 180 - 293 3.8e-36 Myo-inositol-1-phosphate synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010908)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 674
AccB1I GGYRCC 1 cut(s) 1405
AccB7I CCANNNNNTGG 2 cut(s) 533, 1375
AccII CGCG 1 cut(s) 577
AciI CCGC 1 cut(s) 1046
AclWI GGATC 1 cut(s) 517
AcoI YGGCCR 1 cut(s) 459
AcsI RAATTY 2 cut(s) 155, 1068
AcuI CTGAAG 2 cut(s) 1039, 1362
AdeI CACNNNGTG 2 cut(s) 1150, 1375
AfaI GTAC 8 cut(s) 44, 71, 115, 601, 707, 1205, 1426, 1526
AfiI CCNNNNNNNGG 5 cut(s) 185, 186, 533, 1375, 1402
AgsI TTSAA 4 cut(s) 160, 349, 376, 649
AjnI CCWGG 6 cut(s) 461, 474, 532, 865, 1126, 1420
AleI CACNNNNGTG 1 cut(s) 1241
Alw21I GWGCWC 2 cut(s) 1137, 1322
Alw26I GTCTC 1 cut(s) 74
AlwI GGATC 1 cut(s) 517
AoxI GGCC 3 cut(s) 294, 459, 503
ApeKI GCWGC 3 cut(s) 496, 560, 1277
ApoI RAATTY 2 cut(s) 155, 1068
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
AspS9I GGNCC 1 cut(s) 1059
AsuHPI GGTGA 5 cut(s) 406, 1142, 1165, 1390, 1447
AvaII GGWCC 1 cut(s) 1059
BaeGI GKGCMC 1 cut(s) 1170
BaeI ACNNNNGTAYC 4 cut(s) 697, 730, 1416, 1449
BalI TGGCCA 1 cut(s) 461
BanI GGYRCC 1 cut(s) 1405
BanII GRGCYC 1 cut(s) 873
Bbv12I GWGCWC 2 cut(s) 1137, 1322
BbvCI CCTCAGC 1 cut(s) 1347
BbvI GCAGC 3 cut(s) 508, 547, 1264
BccI CCATC 4 cut(s) 198, 811, 1017, 1019
BcgI CGANNNNNNTGC 2 cut(s) 1102, 1136
BciT130I CCWGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
BciVI GTATCC 1 cut(s) 1337
BclI TGATCA 3 cut(s) 591, 1141, 1155
BcoDI GTCTC 1 cut(s) 74
BfaI CTAG 2 cut(s) 468, 965
BfuI GTATCC 1 cut(s) 1337
BisI GCNGC 3 cut(s) 497, 561, 1278
BlpI GCTNAGC 2 cut(s) 1311, 1316
BlsI GCNGC 3 cut(s) 498, 562, 1279
Bme1390I CCNGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
Bme18I GGWCC 1 cut(s) 1059
BmgT120I GGNCC 1 cut(s) 1059
BmiI GGNNCC 2 cut(s) 1407, 1500
BmrFI CCNGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
BmsI GCATC 3 cut(s) 442, 1122, 1236
BpmI CTGGAG 1 cut(s) 1485
Bpu10I CCTNAGC 2 cut(s) 500, 1347
Bpu1102I GCTNAGC 2 cut(s) 1311, 1316
BpuEI CTTGAG 1 cut(s) 1487
BsaI GGTCTC 1 cut(s) 74
BsaJI CCNNGG 8 cut(s) 276, 390, 462, 532, 865, 866, 1062, 1401
Bsc4I CCNNNNNNNGG 5 cut(s) 185, 186, 533, 1375, 1402
Bse1I ACTGG 1 cut(s) 1430
Bse3DI GCAATG 4 cut(s) 555, 1087, 1114, 1467
BseBI CCWGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
BseDI CCNNGG 8 cut(s) 276, 390, 462, 532, 865, 866, 1062, 1401
BseGI GGATG 5 cut(s) 209, 919, 1096, 1113, 1204
BseLI CCNNNNNNNGG 5 cut(s) 185, 186, 533, 1375, 1402
BseMI GCAATG 4 cut(s) 555, 1087, 1114, 1467
BseNI ACTGG 1 cut(s) 1430
BseSI GKGCMC 1 cut(s) 1170
BseXI GCAGC 3 cut(s) 508, 547, 1264
Bsh1236I CGCG 1 cut(s) 577
BshFI GGCC 3 cut(s) 296, 461, 505
BshNI GGYRCC 1 cut(s) 1405
BsiHKAI GWGCWC 2 cut(s) 1137, 1322
BslFI GGGAC 5 cut(s) 13, 161, 440, 812, 848
BslI CCNNNNNNNGG 5 cut(s) 185, 186, 533, 1375, 1402
BsmAI GTCTC 1 cut(s) 74
BsmFI GGGAC 5 cut(s) 13, 161, 440, 812, 848
BsmI GAATGC 1 cut(s) 1444
BsnI GGCC 3 cut(s) 296, 461, 505
Bso31I GGTCTC 1 cut(s) 74
Bsp1286I GDGCHC 4 cut(s) 873, 1137, 1170, 1322
Bsp1407I TGTACA 1 cut(s) 69
Bsp143I GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
Bsp1720I GCTNAGC 2 cut(s) 1311, 1316
Bsp19I CCATGG 1 cut(s) 390
BspACI CCGC 1 cut(s) 1046
BspANI GGCC 3 cut(s) 296, 461, 505
BspFNI CGCG 1 cut(s) 577
BspHI TCATGA 1 cut(s) 97
BspLI GGNNCC 2 cut(s) 1407, 1500
BspPI GGATC 1 cut(s) 517
BspT107I GGYRCC 1 cut(s) 1405
BspTNI GGTCTC 1 cut(s) 74
BsrDI GCAATG 4 cut(s) 555, 1087, 1114, 1467
BsrGI TGTACA 1 cut(s) 69
BsrI ACTGG 1 cut(s) 1430
BssECI CCNNGG 8 cut(s) 276, 390, 462, 532, 865, 866, 1062, 1401
BssMI GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
BssT1I CCWWGG 4 cut(s) 276, 390, 1062, 1401
Bst2UI CCWGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
Bst4CI ACNGT 2 cut(s) 710, 739
Bst6I CTCTTC 2 cut(s) 351, 1124
BstAUI TGTACA 1 cut(s) 69
BstC8I GCNNGC 2 cut(s) 579, 1308
BstDSI CCRYGG 1 cut(s) 390
BstENI CCTNNNNNAGG 1 cut(s) 1400
BstF5I GGATG 5 cut(s) 209, 919, 1096, 1113, 1204
BstFNI CGCG 1 cut(s) 577
BstKTI GATC 8 cut(s) 487, 525, 594, 627, 906, 1144, 1158, 1518
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
BstMWI GCNNNNNNNGC 4 cut(s) 496, 502, 1132, 1312
BstNI CCWGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
BstNSI RCATGY 1 cut(s) 176
BstSCI CCNGG 6 cut(s) 461, 474, 532, 865, 1126, 1420
BstSLI GKGCMC 1 cut(s) 1170
BstUI CGCG 1 cut(s) 577
BstV1I GCAGC 3 cut(s) 508, 547, 1264
BsuI GTATCC 1 cut(s) 1337
BsuRI GGCC 3 cut(s) 296, 461, 505
BtgI CCRYGG 1 cut(s) 390
BtsCI GGATG 5 cut(s) 209, 919, 1096, 1113, 1204
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 8 cut(s) 45, 84, 128, 231, 439, 696, 765, 1437
Cac8I GCNNGC 2 cut(s) 579, 1308
CciI TCATGA 1 cut(s) 97
Cfr13I GGNCC 1 cut(s) 1059
CsiI ACCWGGT 1 cut(s) 1420
Csp6I GTAC 8 cut(s) 43, 70, 114, 600, 706, 1204, 1425, 1525
CspCI CAANNNNNGTGG 2 cut(s) 73, 108
CviAII CATG 6 cut(s) 98, 173, 391, 439, 511, 1513
CviQI GTAC 8 cut(s) 43, 70, 114, 600, 706, 1204, 1425, 1525
DpnI GATC 8 cut(s) 486, 524, 593, 626, 905, 1143, 1157, 1517
DpnII GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
DraIII CACNNNGTG 2 cut(s) 1150, 1375
DrdI GACNNNNNNGTC 1 cut(s) 674
DseDI GACNNNNNNGTC 1 cut(s) 674
EaeI YGGCCR 1 cut(s) 459
Eam1104I CTCTTC 2 cut(s) 351, 1124
EarI CTCTTC 2 cut(s) 351, 1124
Eco130I CCWWGG 4 cut(s) 276, 390, 1062, 1401
Eco147I AGGCCT 1 cut(s) 505
Eco24I GRGCYC 1 cut(s) 873
Eco31I GGTCTC 1 cut(s) 74
Eco32I GATATC 1 cut(s) 783
Eco47I GGWCC 1 cut(s) 1059
Eco57I CTGAAG 2 cut(s) 1039, 1362
EcoNI CCTNNNNNAGG 1 cut(s) 1400
EcoRI GAATTC 1 cut(s) 155
EcoRII CCWGG 6 cut(s) 461, 474, 532, 865, 1126, 1420
EcoRV GATATC 1 cut(s) 783
EcoT14I CCWWGG 4 cut(s) 276, 390, 1062, 1401
EcoT38I GRGCYC 1 cut(s) 873
ErhI CCWWGG 4 cut(s) 276, 390, 1062, 1401
FaeI CATG 6 cut(s) 101, 176, 394, 442, 514, 1516
FaqI GGGAC 5 cut(s) 13, 161, 440, 812, 848
FatI CATG 6 cut(s) 97, 172, 390, 438, 510, 1512
FbaI TGATCA 3 cut(s) 591, 1141, 1155
Fnu4HI GCNGC 3 cut(s) 497, 561, 1278
FokI GGATG 5 cut(s) 216, 926, 1100, 1103, 1211
FriOI GRGCYC 1 cut(s) 873
Fsp4HI GCNGC 3 cut(s) 497, 561, 1278
FspBI CTAG 2 cut(s) 468, 965
GluI GCNGC 3 cut(s) 497, 561, 1278
GsuI CTGGAG 1 cut(s) 1485
HaeIII GGCC 3 cut(s) 296, 461, 505
Hin1II CATG 6 cut(s) 101, 176, 394, 442, 514, 1516
HinfI GANTC 8 cut(s) 26, 58, 261, 331, 471, 515, 537, 1265
HphI GGTGA 5 cut(s) 406, 1142, 1165, 1390, 1447
Hpy166II GTNNAC 7 cut(s) 45, 70, 72, 397, 667, 1206, 1427
Hpy188I TCNGA 4 cut(s) 933, 1213, 1342, 1481
Hpy188III TCNNGA 5 cut(s) 98, 160, 376, 1292, 1502
Hpy8I GTNNAC 7 cut(s) 45, 70, 72, 397, 667, 1206, 1427
Hpy99I CGWCG 1 cut(s) 331
HpyAV CCTTC 5 cut(s) 103, 251, 392, 798, 1063
HpyCH4III ACNGT 2 cut(s) 710, 739
HpyCH4IV ACGT 3 cut(s) 36, 588, 1146
HpyCH4V TGCA 6 cut(s) 172, 289, 490, 581, 1249, 1442
HpyF10VI GCNNNNNNNGC 4 cut(s) 496, 502, 1132, 1312
HpySE526I ACGT 3 cut(s) 36, 588, 1146
Hsp92II CATG 6 cut(s) 101, 176, 394, 442, 514, 1516
Ksp22I TGATCA 3 cut(s) 591, 1141, 1155
Kzo9I GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
LmnI GCTCC 5 cut(s) 373, 971, 1048, 1285, 1504
Lsp1109I GCAGC 3 cut(s) 508, 547, 1264
LweI GCATC 3 cut(s) 442, 1122, 1236
MabI ACCWGGT 1 cut(s) 1420
MaeI CTAG 2 cut(s) 468, 965
MaeII ACGT 3 cut(s) 36, 588, 1146
MaeIII GTNAC 2 cut(s) 434, 1391
MalI GATC 8 cut(s) 486, 524, 593, 626, 905, 1143, 1157, 1517
MboI GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
MboII GAAGA 5 cut(s) 368, 377, 667, 778, 1111
MfeI CAATTG 1 cut(s) 993
MhlI GDGCHC 4 cut(s) 873, 1137, 1170, 1322
MlsI TGGCCA 1 cut(s) 461
MluCI AATT 5 cut(s) 155, 182, 298, 993, 1068
MluNI TGGCCA 1 cut(s) 461
MlyI GAGTC 4 cut(s) 35, 480, 524, 1259
MmeI TCCRAC 2 cut(s) 643, 949
Mox20I TGGCCA 1 cut(s) 461
MscI TGGCCA 1 cut(s) 461
MseI TTAA 3 cut(s) 18, 132, 921
MslI CAYNNNNRTG 2 cut(s) 1241, 1244
Msp20I TGGCCA 1 cut(s) 461
MspR9I CCNGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
MunI CAATTG 1 cut(s) 993
Mva1269I GAATGC 1 cut(s) 1444
MvaI CCWGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
MvnI CGCG 1 cut(s) 577
MwoI GCNNNNNNNGC 4 cut(s) 496, 502, 1132, 1312
NcoI CCATGG 1 cut(s) 390
NdeII GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
NlaIII CATG 6 cut(s) 101, 176, 394, 442, 514, 1516
NlaIV GGNNCC 2 cut(s) 1407, 1500
NmuCI GTSAC 1 cut(s) 434
NspI RCATGY 1 cut(s) 176
OliI CACNNNNGTG 1 cut(s) 1241
PagI TCATGA 1 cut(s) 97
PasI CCCWGGG 1 cut(s) 866
PceI AGGCCT 1 cut(s) 505
PctI GAATGC 1 cut(s) 1444
PfeI GAWTC 4 cut(s) 58, 261, 331, 537
PflMI CCANNNNNTGG 2 cut(s) 533, 1375
PfoI TCCNGGA 1 cut(s) 474
PkrI GCNGC 3 cut(s) 498, 562, 1279
PleI GAGTC 4 cut(s) 34, 479, 523, 1259
PpsI GAGTC 4 cut(s) 34, 479, 523, 1259
Psp6I CCWGG 6 cut(s) 461, 474, 532, 865, 1126, 1420
PspGI CCWGG 6 cut(s) 461, 474, 532, 865, 1126, 1420
PspN4I GGNNCC 2 cut(s) 1407, 1500
PspPI GGNCC 1 cut(s) 1059
RsaI GTAC 8 cut(s) 44, 71, 115, 601, 707, 1205, 1426, 1526
RsaNI GTAC 8 cut(s) 43, 70, 114, 600, 706, 1204, 1425, 1525
RseI CAYNNNNRTG 2 cut(s) 1241, 1244
SaqAI TTAA 3 cut(s) 18, 132, 921
SatI GCNGC 3 cut(s) 497, 561, 1278
Sau3AI GATC 8 cut(s) 484, 522, 591, 624, 903, 1141, 1155, 1515
Sau96I GGNCC 1 cut(s) 1059
SchI GAGTC 4 cut(s) 35, 480, 524, 1259
ScrFI CCNGG 6 cut(s) 463, 476, 534, 867, 1128, 1422
SduI GDGCHC 4 cut(s) 873, 1137, 1170, 1322
SexAI ACCWGGT 1 cut(s) 1420
SfaNI GCATC 3 cut(s) 442, 1122, 1236
SinI GGWCC 1 cut(s) 1059
SmiMI CAYNNNNRTG 2 cut(s) 1241, 1244
SmlI CTYRAG 1 cut(s) 1466
SmoI CTYRAG 1 cut(s) 1466
Sse9I AATT 5 cut(s) 155, 182, 298, 993, 1068
SseBI AGGCCT 1 cut(s) 505
SsiI CCGC 1 cut(s) 1046
SspMI CTAG 2 cut(s) 468, 965
StuI AGGCCT 1 cut(s) 505
StyD4I CCNGG 6 cut(s) 461, 474, 532, 865, 1126, 1420
StyI CCWWGG 4 cut(s) 276, 390, 1062, 1401
TaaI ACNGT 2 cut(s) 710, 739
TaiI ACGT 3 cut(s) 39, 591, 1149
TaqI TCGA 5 cut(s) 24, 329, 518, 1103, 1122
TasI AATT 5 cut(s) 155, 182, 298, 993, 1068
TatI WGTACW 4 cut(s) 42, 69, 1203, 1524
TfiI GAWTC 4 cut(s) 58, 261, 331, 537
Tru1I TTAA 3 cut(s) 18, 132, 921
Tru9I TTAA 3 cut(s) 18, 132, 921
TscAI CASTG 8 cut(s) 52, 91, 128, 238, 439, 703, 765, 1437
TseFI GTSAC 1 cut(s) 434
TseI GCWGC 3 cut(s) 496, 560, 1277
Tsp45I GTSAC 1 cut(s) 434
TspDTI ATGAA 8 cut(s) 50, 86, 455, 544, 786, 823, 956, 1046
TspRI CASTG 8 cut(s) 52, 91, 128, 238, 439, 703, 765, 1437
Van91I CCANNNNNTGG 2 cut(s) 533, 1375
VpaK11BI GGWCC 1 cut(s) 1059
XagI CCTNNNNNAGG 1 cut(s) 1400
XapI RAATTY 2 cut(s) 155, 1068
XceI RCATGY 1 cut(s) 176
XspI CTAG 2 cut(s) 468, 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.