pycom01g05310

Inositol-3-phosphate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
4948196 .. 4950701
2506 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g05310.1

Sequence Viewer

Length: 1533 bp
ATGTTCATCGATAGCTTCAAGGTAGAGTCCCCAAACGTAGCGTACACAGAAAATGAGATTCATTCAGTGTACAACTACGAGACCACTGAGCTTGTCCATGAGAACAGAAATGGAACGTATCAGTGGATAGTGAAGCCCAAAACTATCAAATACGAATTCAAGACTGATGTCCATGTCCCCAAACTAGGGGTAATGCTTGTGGGGTGGGGTGGAAACAACGGCTCAACCCTCACTGCTGGTGTGATTGCAAACAGAGAAGGAATCTCCTGGGCAACCAAGGACAAGGTGCAGCAAGCCAATTACTTTGGCTCACTGACCCAAGCCTCATCCATCCGTGTTGGGTCTTTCAATGGAGAGGAGATTTATGCCCCATTCAAGAGCCTCCTCCCTATGGTGAACCCAGATGACATAGTGTTTGGGGGTTGGGACATTAGTGACATGAACTTAGCAGATGCAATGGCGAGGGCAAAGGTCCTTGACATTGATCGACAAAAGCAACTGAGGCCATACATGGAGTCTATGCTCCCACTCCCTGGAATCTACGACCCCGATTTCATCGCTGCCAACCAAGGTGCTCGTGCCAACAACGTCATCAAGGGCACCAAGAAGGAACAACTCCAACAAGTCATTAAAGACATTAGAGAATTCAAGGAGAAGAACAAGGTGGACAGGGTGGTTGTGCTGTGGACTGCCAACACTGAGAGGTATAGTAATGTTGTTGTGGGGCTAAACGACACTGTCGAGAACCTGTTGGGTTCAGTGGACAAGAATGAAGCTGAGATATCTCCTTCCACATTGTATGCCATAGCTTGTGTTCTTGAAAATATTCCGTTCATCAATGGAAGCCCACAAAACACTTTTGTCCCAGGGCTGATTGATTTGGCAATTAGGAGAAACAGTTTGATTGGTGGGGATGACTTTAAGAGTGGTCAGACCAAAATGAAGTCTGTGTTGGTTGATTTCCTTGTTGGGGCTGGAATCAAGCCAACAGCCATTGTGAGCTACAACCATCTTGGAAACAATGACGGCATGAATCTTTCTGCACCGCAAACCTTCCGGTCCAAGGAGATTTCAAAGAGCAATGTTGTGGATGACATGGTGTCCAGCAATGGCATACTTTACGGGCCAGGTGAGCACCCTGACCATGTTGTGGTGATCAAGTATGTCCCATATGTTGGGGACAGCAAGAGAGCTTTAGATGAGTACACCTCTGAGATTTTCATGGGTGGGCAAAACACCATTGTGTTGCACAACACCTGTGAGGATTCCCTCTTGGCTGCTCCTATCATCCTCGATTTGGTTCTCCTCGCCGAACTCAGCACCCGTATCCAGCTCAAATCCGAAGCAGAGGCCAAGTTCCACTCCTTCCACCCTGTGGCTACAATTCTCAGTTACCTCAGCAAGGCTCCTCTTGTTCCGCCAGGTACACCCGTGGTGAATGCACTGTCAAAGCAGAGGGCAATGCTGGAAAACATACTGAGGGCTTGTGTTGGTCTGGCTCCCGAGAACAACATGATATTGGAATACAAGTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

511

Amino Acids

56.26

Weight (kDa)

5.61

Isoelectric Point (pI)

31.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_5 PF07994 62 - 494 2.8e-143 Myo-inositol-1-phosphate synthase
Inos-1-P_synth PF01658 310 - 423 2.7e-36 Myo-inositol-1-phosphate synthase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010908)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 599
AccB7I CCANNNNNTGG 4 cut(s) 533, 1150, 1175, 1375
AciI CCGC 2 cut(s) 1046, 1418
AcsI RAATTY 2 cut(s) 155, 644
AdeI CACNNNGTG 1 cut(s) 1375
AfaI GTAC 4 cut(s) 44, 71, 1205, 1426
AgsI TTSAA 7 cut(s) 19, 160, 349, 376, 649, 821, 1074
AhdI GACNNNNNGTC 1 cut(s) 1099
AjnI CCWGG 5 cut(s) 266, 532, 865, 1126, 1420
AjuI GAANNNNNNNTTGG 2 cut(s) 935, 967
AleI CACNNNNGTG 1 cut(s) 1241
AluBI AGCT 7 cut(s) 15, 91, 776, 809, 1002, 1193, 1333
AluI AGCT 7 cut(s) 15, 91, 776, 809, 1002, 1193, 1333
Alw21I GWGCWC 2 cut(s) 577, 1137
Alw26I GTCTC 1 cut(s) 74
Ama87I CYCGRG 1 cut(s) 1502
AoxI GGCC 3 cut(s) 503, 1124, 1350
ApeKI GCWGC 3 cut(s) 289, 560, 1277
ApoI RAATTY 2 cut(s) 155, 644
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
Asp700I GAANNNNTTC 1 cut(s) 825
AspS9I GGNCC 3 cut(s) 472, 1059, 1124
AsuHPI GGTGA 4 cut(s) 406, 1142, 1165, 1447
AvaI CYCGRG 1 cut(s) 1502
AvaII GGWCC 2 cut(s) 472, 1059
BaeGI GKGCMC 1 cut(s) 602
BaeI ACNNNNGTAYC 2 cut(s) 1416, 1449
BanI GGYRCC 1 cut(s) 599
BauI CACGAG 1 cut(s) 576
Bbv12I GWGCWC 2 cut(s) 577, 1137
BbvCI CCTCAGC 1 cut(s) 1397
BbvI GCAGC 3 cut(s) 301, 547, 1264
BccI CCATC 2 cut(s) 338, 1017
BceAI ACGGC 2 cut(s) 235, 1042
BciT130I CCWGG 5 cut(s) 268, 534, 867, 1128, 1422
BciVI GTATCC 1 cut(s) 1337
BclI TGATCA 1 cut(s) 1155
BcoDI GTCTC 1 cut(s) 74
BfaI CTAG 1 cut(s) 185
BfuI GTATCC 1 cut(s) 1337
BisI GCNGC 3 cut(s) 290, 561, 1278
BlsI GCNGC 3 cut(s) 291, 562, 1279
Bme1390I CCNGG 5 cut(s) 268, 534, 867, 1128, 1422
Bme18I GGWCC 2 cut(s) 472, 1059
BmeRI GACNNNNNGTC 1 cut(s) 1099
BmeT110I CYCGRG 1 cut(s) 1502
BmgT120I GGNCC 3 cut(s) 472, 1059, 1124
BmiI GGNNCC 3 cut(s) 601, 1407, 1500
BmrFI CCNGG 5 cut(s) 268, 534, 867, 1128, 1422
BmsI GCATC 1 cut(s) 442
BoxI GACNNNNGTC 1 cut(s) 167
BplI GAGNNNNNCTC 2 cut(s) 1193, 1225
Bpu10I CCTNAGC 1 cut(s) 1397
Bsa29I ATCGAT 1 cut(s) 9
BsaI GGTCTC 1 cut(s) 74
BsaJI CCNNGG 8 cut(s) 267, 276, 532, 568, 865, 866, 1062, 1431
BsaWI WCCGGW 1 cut(s) 1056
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bse3DI GCAATG 4 cut(s) 462, 1087, 1114, 1467
BseBI CCWGG 5 cut(s) 268, 534, 867, 1128, 1422
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 8 cut(s) 267, 276, 532, 568, 865, 866, 1062, 1431
BseGI GGATG 5 cut(s) 326, 330, 919, 1096, 1287
BseMI GCAATG 4 cut(s) 462, 1087, 1114, 1467
BseMII CTCAG 9 cut(s) 78, 491, 690, 768, 1203, 1330, 1402, 1411, 1469
BseRI GAGGAG 4 cut(s) 371, 374, 1295, 1398
BseSI GKGCMC 1 cut(s) 602
BseXI GCAGC 3 cut(s) 301, 547, 1264
BsgI GTGCAG 2 cut(s) 308, 1026
BshFI GGCC 3 cut(s) 505, 1126, 1352
BshNI GGYRCC 1 cut(s) 599
BshVI ATCGAT 1 cut(s) 9
BsiHKAI GWGCWC 2 cut(s) 577, 1137
BsiHKCI CYCGRG 1 cut(s) 1502
BsiSI CCGG 1 cut(s) 1057
BslFI GGGAC 6 cut(s) 13, 161, 440, 848, 1151, 1193
BsmAI GTCTC 1 cut(s) 74
BsmFI GGGAC 6 cut(s) 13, 161, 440, 848, 1151, 1193
BsmI GAATGC 1 cut(s) 1444
BsnI GGCC 3 cut(s) 505, 1126, 1352
Bso31I GGTCTC 1 cut(s) 74
BsoBI CYCGRG 1 cut(s) 1502
Bsp1286I GDGCHC 3 cut(s) 577, 602, 1137
Bsp1407I TGTACA 1 cut(s) 69
Bsp143I GATC 2 cut(s) 484, 1155
BspACI CCGC 2 cut(s) 1046, 1418
BspANI GGCC 3 cut(s) 505, 1126, 1352
BspCNI CTCAG 9 cut(s) 79, 492, 691, 769, 1204, 1329, 1401, 1410, 1470
BspDI ATCGAT 1 cut(s) 9
BspLI GGNNCC 3 cut(s) 601, 1407, 1500
BspT107I GGYRCC 1 cut(s) 599
BspTNI GGTCTC 1 cut(s) 74
BsrDI GCAATG 4 cut(s) 462, 1087, 1114, 1467
BsrGI TGTACA 1 cut(s) 69
BssECI CCNNGG 8 cut(s) 267, 276, 532, 568, 865, 866, 1062, 1431
BssMI GATC 2 cut(s) 484, 1155
BssSI CACGAG 1 cut(s) 576
BssT1I CCWWGG 3 cut(s) 276, 568, 1062
Bst2BI CACGAG 1 cut(s) 576
Bst2UI CCWGG 5 cut(s) 268, 534, 867, 1128, 1422
Bst4CI ACNGT 3 cut(s) 739, 899, 1446
BstAUI TGTACA 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 294
BstDSI CCRYGG 1 cut(s) 1431
BstENI CCTNNNNNAGG 1 cut(s) 1400
BstF5I GGATG 5 cut(s) 326, 330, 919, 1096, 1287
BstKTI GATC 2 cut(s) 487, 1158
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 2 cut(s) 484, 1155
BstMWI GCNNNNNNNGC 2 cut(s) 502, 1132
BstNI CCWGG 5 cut(s) 268, 534, 867, 1128, 1422
BstPAI GACNNNNGTC 1 cut(s) 167
BstSCI CCNGG 5 cut(s) 266, 532, 865, 1126, 1420
BstSLI GKGCMC 1 cut(s) 602
BstV1I GCAGC 3 cut(s) 301, 547, 1264
Bsu15I ATCGAT 1 cut(s) 9
BsuI GTATCC 1 cut(s) 1337
BsuRI GGCC 3 cut(s) 505, 1126, 1352
BsuTUI ATCGAT 1 cut(s) 9
BtgI CCRYGG 1 cut(s) 1431
BtgZI GCGATG 1 cut(s) 541
BtsCI GGATG 5 cut(s) 326, 330, 919, 1096, 1287
BtsI GCAGTG 1 cut(s) 231
BtsIMutI CAGTG 9 cut(s) 72, 84, 128, 231, 311, 696, 735, 765, 1442
Cac8I GCNNGC 1 cut(s) 294
Cfr13I GGNCC 3 cut(s) 472, 1059, 1124
ClaI ATCGAT 1 cut(s) 9
Csp6I GTAC 4 cut(s) 43, 70, 1204, 1425
CspCI CAANNNNNGTGG 2 cut(s) 73, 108
CviAII CATG 9 cut(s) 98, 173, 439, 511, 1030, 1096, 1145, 1222, 1513
CviQI GTAC 4 cut(s) 43, 70, 1204, 1425
DpnI GATC 2 cut(s) 486, 1157
DpnII GATC 2 cut(s) 484, 1155
DraIII CACNNNGTG 1 cut(s) 1375
DriI GACNNNNNGTC 1 cut(s) 1099
Eam1105I GACNNNNNGTC 1 cut(s) 1099
EciI GGCGGA 1 cut(s) 1407
Eco130I CCWWGG 3 cut(s) 276, 568, 1062
Eco31I GGTCTC 1 cut(s) 74
Eco32I GATATC 1 cut(s) 783
Eco47I GGWCC 2 cut(s) 472, 1059
Eco88I CYCGRG 1 cut(s) 1502
EcoNI CCTNNNNNAGG 1 cut(s) 1400
EcoO109I RGGNCCY 1 cut(s) 472
EcoRI GAATTC 2 cut(s) 155, 644
EcoRII CCWGG 5 cut(s) 266, 532, 865, 1126, 1420
EcoRV GATATC 1 cut(s) 783
EcoT14I CCWWGG 3 cut(s) 276, 568, 1062
ErhI CCWWGG 3 cut(s) 276, 568, 1062
FaeI CATG 9 cut(s) 101, 176, 442, 514, 1033, 1099, 1148, 1225, 1516
FaqI GGGAC 6 cut(s) 13, 161, 440, 848, 1151, 1193
FatI CATG 9 cut(s) 97, 172, 438, 510, 1029, 1095, 1144, 1221, 1512
FauNDI CATATG 1 cut(s) 1171
FbaI TGATCA 1 cut(s) 1155
Fnu4HI GCNGC 3 cut(s) 290, 561, 1278
FokI GGATG 5 cut(s) 313, 317, 926, 1103, 1274
Fsp4HI GCNGC 3 cut(s) 290, 561, 1278
FspBI CTAG 1 cut(s) 185
GluI GCNGC 3 cut(s) 290, 561, 1278
HaeIII GGCC 3 cut(s) 505, 1126, 1352
HapII CCGG 1 cut(s) 1057
Hin1II CATG 9 cut(s) 101, 176, 442, 514, 1033, 1099, 1148, 1225, 1516
HinfI GANTC 8 cut(s) 26, 58, 261, 515, 537, 978, 1033, 1265
HpaII CCGG 1 cut(s) 1057
HphI GGTGA 4 cut(s) 406, 1142, 1165, 1447
Hpy166II GTNNAC 8 cut(s) 45, 70, 397, 667, 687, 763, 1206, 1427
Hpy188I TCNGA 3 cut(s) 933, 1213, 1342
Hpy188III TCNNGA 5 cut(s) 160, 376, 742, 818, 1502
Hpy8I GTNNAC 8 cut(s) 45, 70, 397, 667, 687, 763, 1206, 1427
HpyAV CCTTC 5 cut(s) 251, 601, 798, 1063, 1375
HpyCH4III ACNGT 3 cut(s) 739, 899, 1446
HpyCH4IV ACGT 3 cut(s) 36, 116, 588
HpyCH4V TGCA 6 cut(s) 248, 289, 455, 1043, 1249, 1442
HpyF10VI GCNNNNNNNGC 2 cut(s) 502, 1132
HpySE526I ACGT 3 cut(s) 36, 116, 588
Hsp92II CATG 9 cut(s) 101, 176, 442, 514, 1033, 1099, 1148, 1225, 1516
Ksp22I TGATCA 1 cut(s) 1155
Kzo9I GATC 2 cut(s) 484, 1155
LmnI GCTCC 4 cut(s) 528, 1285, 1411, 1504
Lsp1109I GCAGC 3 cut(s) 301, 547, 1264
LweI GCATC 1 cut(s) 442
MaeI CTAG 1 cut(s) 185
MaeII ACGT 3 cut(s) 36, 116, 588
MaeIII GTNAC 2 cut(s) 434, 1391
MalI GATC 2 cut(s) 486, 1157
MboI GATC 2 cut(s) 484, 1155
MboII GAAGA 1 cut(s) 667
MhlI GDGCHC 3 cut(s) 577, 602, 1137
MluCI AATT 5 cut(s) 155, 298, 644, 885, 1383
MlyI GAGTC 2 cut(s) 35, 524
MmeI TCCRAC 1 cut(s) 643
MroXI GAANNNNTTC 1 cut(s) 825
MseI TTAA 2 cut(s) 630, 921
MslI CAYNNNNRTG 1 cut(s) 1241
MspI CCGG 1 cut(s) 1057
MspR9I CCNGG 5 cut(s) 268, 534, 867, 1128, 1422
Mva1269I GAATGC 1 cut(s) 1444
MvaI CCWGG 5 cut(s) 268, 534, 867, 1128, 1422
MwoI GCNNNNNNNGC 2 cut(s) 502, 1132
NdeI CATATG 1 cut(s) 1171
NdeII GATC 2 cut(s) 484, 1155
NlaIII CATG 9 cut(s) 101, 176, 442, 514, 1033, 1099, 1148, 1225, 1516
NlaIV GGNNCC 3 cut(s) 601, 1407, 1500
NmuCI GTSAC 1 cut(s) 434
OliI CACNNNNGTG 1 cut(s) 1241
PasI CCCWGGG 1 cut(s) 866
PcsI WCGNNNNNNNCGW 1 cut(s) 738
PctI GAATGC 1 cut(s) 1444
PdmI GAANNNNTTC 1 cut(s) 825
PfeI GAWTC 6 cut(s) 58, 261, 537, 978, 1033, 1265
PflFI GACNNNGTC 1 cut(s) 737
PflMI CCANNNNNTGG 4 cut(s) 533, 1150, 1175, 1375
PkrI GCNGC 3 cut(s) 291, 562, 1279
PleI GAGTC 2 cut(s) 34, 523
PpsI GAGTC 2 cut(s) 34, 523
PpuMI RGGWCCY 1 cut(s) 472
PshAI GACNNNNGTC 1 cut(s) 167
Psp5II RGGWCCY 1 cut(s) 472
Psp6I CCWGG 5 cut(s) 266, 532, 865, 1126, 1420
PspGI CCWGG 5 cut(s) 266, 532, 865, 1126, 1420
PspN4I GGNNCC 3 cut(s) 601, 1407, 1500
PspPI GGNCC 3 cut(s) 472, 1059, 1124
PspPPI RGGWCCY 1 cut(s) 472
PsyI GACNNNGTC 1 cut(s) 737
RsaI GTAC 4 cut(s) 44, 71, 1205, 1426
RsaNI GTAC 4 cut(s) 43, 70, 1204, 1425
RseI CAYNNNNRTG 1 cut(s) 1241
SaqAI TTAA 2 cut(s) 630, 921
SatI GCNGC 3 cut(s) 290, 561, 1278
Sau3AI GATC 2 cut(s) 484, 1155
Sau96I GGNCC 3 cut(s) 472, 1059, 1124
SchI GAGTC 2 cut(s) 35, 524
ScrFI CCNGG 5 cut(s) 268, 534, 867, 1128, 1422
SduI GDGCHC 3 cut(s) 577, 602, 1137
SfaNI GCATC 1 cut(s) 442
SinI GGWCC 2 cut(s) 472, 1059
SmiMI CAYNNNNRTG 1 cut(s) 1241
Sse9I AATT 5 cut(s) 155, 298, 644, 885, 1383
SsiI CCGC 2 cut(s) 1046, 1418
SspI AATATT 1 cut(s) 826
SspMI CTAG 1 cut(s) 185
StyD4I CCNGG 5 cut(s) 266, 532, 865, 1126, 1420
StyI CCWWGG 3 cut(s) 276, 568, 1062
TaaI ACNGT 3 cut(s) 739, 899, 1446
TaiI ACGT 3 cut(s) 39, 119, 591
TaqI TCGA 4 cut(s) 9, 487, 741, 1293
TasI AATT 5 cut(s) 155, 298, 644, 885, 1383
TatI WGTACW 2 cut(s) 69, 1203
TfiI GAWTC 6 cut(s) 58, 261, 537, 978, 1033, 1265
Tru1I TTAA 2 cut(s) 630, 921
Tru9I TTAA 2 cut(s) 630, 921
TscAI CASTG 9 cut(s) 72, 91, 128, 238, 318, 703, 742, 765, 1449
TseFI GTSAC 1 cut(s) 434
TseI GCWGC 3 cut(s) 289, 560, 1277
Tsp45I GTSAC 1 cut(s) 434
TspDTI ATGAA 8 cut(s) 50, 455, 544, 786, 823, 956, 1046, 1210
TspGWI ACGGA 2 cut(s) 323, 819
TspRI CASTG 9 cut(s) 72, 91, 128, 238, 318, 703, 742, 765, 1449
Tth111I GACNNNGTC 1 cut(s) 737
Van91I CCANNNNNTGG 4 cut(s) 533, 1150, 1175, 1375
VpaK11BI GGWCC 2 cut(s) 472, 1059
XagI CCTNNNNNAGG 1 cut(s) 1400
XapI RAATTY 2 cut(s) 155, 644
XmnI GAANNNNTTC 1 cut(s) 825
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.