pycom15g29820

Inositol-3-phosphate

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0010908
Physical Location & Seq
Forward (+)
26879374 .. 26881298
1925 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g29820.2

Sequence Viewer

Length: 1203 bp
ATGTTCATCGATAGCTTTAAGGTAGAGTCCCCGAACGTGGTGTATACAGAGAACCAGATTCATTCGGTGTACAGCTACGAAACCACTGCGCTTGTGCATGAGAACAGAAATGGAAGGTATCAGTGGATTGTGAAGCCCAAAGCTGTCAAATACGAATTCAAGACTGATATCCATGTCCCCAAACTAGGGGTAATGCTGGTGGGTTGGGGTGGAAACAATGGCTCAACCCTCACTGCTGGTGTGATTGCAAACAGAGAAGGAATCTCCTGGGCAACCAAAGACAAGGTGCAACAAGCCAACTACTTCGGCTCACTGACCCAAGCCTCATCCATCCGGGTTGGGTCTTTCAACGGCGAGGAGATTTATGCCCCGTTCAAGAGCCTCCTGCCTATGGTGAAGCCCGATGACATTGTATTTGGGGGTTGGGACATTAGTGACTTGAACTTAGCAGATGCAATGGCAAGGGCAAAGGTCCTTGACATTGATCTGCAAAAGCAACTGAGGCCATACATGGAGCCCATGCTCCCACTCCCTGGAATCTACGACCCCGATTTCATCGCTGCCAACCAAGGTGCTCGTGCCAACAACGTCATCAAGGGCACCAAGAAGGAACAACTCCAACAAGTCATTGAAGACATTAGGGAGTTCAAGGAGAAGAGCAAGGTGGACAAGGTGGTTGTGCTGTGGACTGCCAACACTGAAAGGTATAGTAATGTGATTGTGGGGCTAAACGACACCGTTGAGAACCTGTTGGGTTCAGTAGACAAGAATGAAGCTGAGATCTCTCCTTCCACATTGTATGCCATAGCTTGTGTTCTTGAAAATGTTCCTTTCATCAATGGAAGCCCACAAAACACTTTTGTCCCAGGACTCATTGATTTGGCAATTAGGAGAAACAGTTTGATCGGTGGGGATGACTTTAAGAGTGGTCAGACCAAGATGAAGTCTGTGTTGGTTGATTTCCTTGTTGGGGCTGGAATCAAGCCAACATCCATAGTGAGCTACAACCATCTTGGGAACAATGACGGCATGAACCTTTCCGCACCGCAAACCTTCCGGTCGAAAGAGATTTCAAAGAGCAATGTTGTGGATGACATGGTGTCCAGCAATGGCGTCCTCTACGGGCCAGGCGAGCAGCCTGACCATGTGGTGATCGATCAAGTATGTGCCATATGTTGGGGACAGCAAGAGAGCCCTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0002252 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004512 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005975 GO:0006020 GO:0006021 GO:0006066 GO:0006575 GO:0006629 GO:0006644 GO:0006650 GO:0006658 GO:0006659 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009266 GO:0009267 GO:0009314 GO:0009408 GO:0009416 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009620 GO:0009628 GO:0009636 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010154 GO:0010264 GO:0016036 GO:0016051 GO:0016853 GO:0016872 GO:0017144 GO:0019637 GO:0019751 GO:0022414 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032958 GO:0033517 GO:0033554 GO:0034637 GO:0042221 GO:0042398 GO:0042493 GO:0042542 GO:0042594 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043647 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044262 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045017 GO:0046165 GO:0046173 GO:0046474 GO:0046486 GO:0046677 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0061458 GO:0071496 GO:0071704 GO:0090407 GO:0098542 GO:1901564 GO:1901566 GO:1901576 GO:1901615 GO:1901617 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00521 ko00562 ko01100 ko01130 map00521 map00562 map01100 map01130
Pfam Domains
Protein Families
Inos-1-P_synth NAD_binding_5

Protein Analysis

401

Amino Acids

44.01

Weight (kDa)

5.31

Isoelectric Point (pI)

28.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010908)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G22240 AT2G22240 AT2G22240 AT4G39800 AT5G10170
fragaria_vesca FvH4_1g21450 FvH4_1g21450
malus_domestica MD00G1040900.v1.1
prunus_persica Prupe.6G180500_v2.0.a1
pyrus_communis pycom01g05310 pycom15g29820
rosa_chinensis RchiOBHm_Chr2g0115271
rosa_laevigata RLG00000018172
rosa_multiflora Rmu_sc0001626.1_g000043
rosa_roxburghii Rroxscaffold_2G00130810
rosa_rugosa Rorug02G0195600
rosa_samantha Rh2AG253400 Rh2BG263800 Rh2DG261600
rosa_wichuraiana Rw2G019810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 599
AccB7I CCANNNNNTGG 2 cut(s) 533, 1176
AccI GTMKAC 2 cut(s) 44, 762
AciI CCGC 2 cut(s) 1041, 1046
AcsI RAATTY 1 cut(s) 155
AcyI GRCGYC 1 cut(s) 1113
AfaI GTAC 1 cut(s) 71
AfiI CCNNNNNNNGG 7 cut(s) 37, 185, 186, 391, 533, 970, 1176
AgsI TTSAA 8 cut(s) 160, 349, 376, 442, 632, 649, 821, 1074
AhdI GACNNNNNGTC 1 cut(s) 1099
AjnI CCWGG 5 cut(s) 266, 532, 865, 1126, 1195
AjuI GAANNNNNNNTTGG 2 cut(s) 935, 967
AluBI AGCT 6 cut(s) 15, 75, 143, 776, 809, 1002
AluI AGCT 6 cut(s) 15, 75, 143, 776, 809, 1002
Alw21I GWGCWC 1 cut(s) 577
AoxI GGCC 2 cut(s) 503, 1124
ApeKI GCWGC 2 cut(s) 560, 1135
ApoI RAATTY 1 cut(s) 155
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
Asp700I GAANNNNTTC 1 cut(s) 825
AspLEI GCGC 1 cut(s) 91
AspS9I GGNCC 2 cut(s) 472, 1124
AsuC2I CCSGG 1 cut(s) 335
AsuHPI GGTGA 2 cut(s) 406, 1162
AvaII GGWCC 1 cut(s) 472
BaeGI GKGCMC 1 cut(s) 602
BanI GGYRCC 1 cut(s) 599
BanII GRGCYC 2 cut(s) 519, 1196
BauI CACGAG 1 cut(s) 576
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 1 cut(s) 577
BbvI GCAGC 2 cut(s) 547, 1147
BccI CCATC 2 cut(s) 338, 1017
BceAI ACGGC 2 cut(s) 367, 1042
BcgI CGANNNNNNTGC 2 cut(s) 68, 102
BciT130I CCWGG 5 cut(s) 268, 534, 867, 1128, 1197
BcnI CCSGG 1 cut(s) 335
BfaI CTAG 1 cut(s) 185
BglII AGATCT 1 cut(s) 780
BisI GCNGC 2 cut(s) 561, 1136
BlsI GCNGC 2 cut(s) 562, 1137
Bme1390I CCNGG 6 cut(s) 268, 335, 534, 867, 1128, 1197
Bme18I GGWCC 1 cut(s) 472
BmeRI GACNNNNNGTC 1 cut(s) 1099
BmgT120I GGNCC 2 cut(s) 472, 1124
BmiI GGNNCC 2 cut(s) 516, 601
BmrFI CCNGG 6 cut(s) 268, 335, 534, 867, 1128, 1197
BmsI GCATC 1 cut(s) 442
BpiI GAAGAC 1 cut(s) 639
BpuMI CCSGG 1 cut(s) 335
Bsa29I ATCGAT 2 cut(s) 9, 1155
BsaHI GRCGYC 1 cut(s) 1113
BsaJI CCNNGG 5 cut(s) 267, 532, 568, 865, 1195
BsaWI WCCGGW 1 cut(s) 1056
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 7 cut(s) 37, 185, 186, 391, 533, 970, 1176
Bse3DI GCAATG 3 cut(s) 462, 1087, 1114
BseBI CCWGG 5 cut(s) 268, 534, 867, 1128, 1197
BseCI ATCGAT 2 cut(s) 9, 1155
BseDI CCNNGG 5 cut(s) 267, 532, 568, 865, 1195
BseGI GGATG 5 cut(s) 326, 330, 919, 989, 1096
BseLI CCNNNNNNNGG 7 cut(s) 37, 185, 186, 391, 533, 970, 1176
BseMI GCAATG 3 cut(s) 462, 1087, 1114
BseMII CTCAG 2 cut(s) 491, 768
BseRI GAGGAG 1 cut(s) 371
BseSI GKGCMC 1 cut(s) 602
BseXI GCAGC 2 cut(s) 547, 1147
Bsh1285I CGRYCG 1 cut(s) 1061
BshFI GGCC 2 cut(s) 505, 1126
BshNI GGYRCC 1 cut(s) 599
BshVI ATCGAT 2 cut(s) 9, 1155
BsiEI CGRYCG 1 cut(s) 1061
BsiHKAI GWGCWC 1 cut(s) 577
BsiSI CCGG 2 cut(s) 334, 1057
BslFI GGGAC 5 cut(s) 13, 161, 440, 848, 1194
BslI CCNNNNNNNGG 7 cut(s) 37, 185, 186, 391, 533, 970, 1176
BsmFI GGGAC 5 cut(s) 13, 161, 440, 848, 1194
BsnI GGCC 2 cut(s) 505, 1126
Bsp1286I GDGCHC 4 cut(s) 519, 577, 602, 1196
Bsp1407I TGTACA 1 cut(s) 69
Bsp143I GATC 5 cut(s) 484, 780, 903, 1152, 1156
BspACI CCGC 2 cut(s) 1041, 1046
BspANI GGCC 2 cut(s) 505, 1126
BspCNI CTCAG 2 cut(s) 492, 769
BspDI ATCGAT 2 cut(s) 9, 1155
BspLI GGNNCC 2 cut(s) 516, 601
BspQI GCTCTTC 1 cut(s) 650
BspT107I GGYRCC 1 cut(s) 599
BsrDI GCAATG 3 cut(s) 462, 1087, 1114
BsrGI TGTACA 1 cut(s) 69
BssECI CCNNGG 5 cut(s) 267, 532, 568, 865, 1195
BssMI GATC 5 cut(s) 484, 780, 903, 1152, 1156
BssNAI GTATAC 1 cut(s) 45
BssNI GRCGYC 1 cut(s) 1113
BssSI CACGAG 1 cut(s) 576
BssT1I CCWWGG 1 cut(s) 568
Bst1107I GTATAC 1 cut(s) 45
Bst2BI CACGAG 1 cut(s) 576
Bst2UI CCWGG 5 cut(s) 268, 534, 867, 1128, 1197
Bst4CI ACNGT 2 cut(s) 739, 899
Bst6I CTCTTC 1 cut(s) 650
BstACI GRCGYC 1 cut(s) 1113
BstAUI TGTACA 1 cut(s) 69
BstC8I GCNNGC 1 cut(s) 1133
BstDEI CTNAG 3 cut(s) 445, 500, 777
BstF5I GGATG 5 cut(s) 326, 330, 919, 989, 1096
BstHHI GCGC 1 cut(s) 91
BstKTI GATC 5 cut(s) 487, 783, 906, 1155, 1159
BstMBI GATC 5 cut(s) 484, 780, 903, 1152, 1156
BstMCI CGRYCG 1 cut(s) 1061
BstMWI GCNNNNNNNGC 2 cut(s) 502, 1132
BstNI CCWGG 5 cut(s) 268, 534, 867, 1128, 1197
BstSCI CCNGG 6 cut(s) 266, 333, 532, 865, 1126, 1195
BstSLI GKGCMC 1 cut(s) 602
BstV1I GCAGC 2 cut(s) 547, 1147
BstV2I GAAGAC 1 cut(s) 639
BstX2I RGATCY 1 cut(s) 780
BstYI RGATCY 1 cut(s) 780
BstZ17I GTATAC 1 cut(s) 45
Bsu15I ATCGAT 2 cut(s) 9, 1155
BsuRI GGCC 2 cut(s) 505, 1126
BsuTUI ATCGAT 2 cut(s) 9, 1155
BtgZI GCGATG 1 cut(s) 541
BtsCI GGATG 5 cut(s) 326, 330, 919, 989, 1096
BtsI GCAGTG 2 cut(s) 84, 231
BtsIMutI CAGTG 5 cut(s) 84, 128, 231, 311, 696
Cac8I GCNNGC 1 cut(s) 1133
CfoI GCGC 1 cut(s) 91
Cfr13I GGNCC 2 cut(s) 472, 1124
ClaI ATCGAT 2 cut(s) 9, 1155
CseI GACGC 1 cut(s) 1102
Csp6I GTAC 1 cut(s) 70
CspCI CAANNNNNGTGG 2 cut(s) 73, 108
CviAII CATG 7 cut(s) 98, 173, 511, 520, 1030, 1096, 1145
CviQI GTAC 1 cut(s) 70
DdeI CTNAG 3 cut(s) 445, 500, 777
DpnI GATC 5 cut(s) 486, 782, 905, 1154, 1158
DpnII GATC 5 cut(s) 484, 780, 903, 1152, 1156
DriI GACNNNNNGTC 1 cut(s) 1099
Eam1104I CTCTTC 1 cut(s) 650
Eam1105I GACNNNNNGTC 1 cut(s) 1099
EarI CTCTTC 1 cut(s) 650
Eco130I CCWWGG 1 cut(s) 568
Eco24I GRGCYC 2 cut(s) 519, 1196
Eco32I GATATC 1 cut(s) 169
Eco47I GGWCC 1 cut(s) 472
EcoO109I RGGNCCY 1 cut(s) 472
EcoRI GAATTC 1 cut(s) 155
EcoRII CCWGG 5 cut(s) 266, 532, 865, 1126, 1195
EcoRV GATATC 1 cut(s) 169
EcoT14I CCWWGG 1 cut(s) 568
EcoT38I GRGCYC 2 cut(s) 519, 1196
ErhI CCWWGG 1 cut(s) 568
FaeI CATG 7 cut(s) 101, 176, 514, 523, 1033, 1099, 1148
FaqI GGGAC 5 cut(s) 13, 161, 440, 848, 1194
FatI CATG 7 cut(s) 97, 172, 510, 519, 1029, 1095, 1144
FauNDI CATATG 1 cut(s) 1172
FblI GTMKAC 2 cut(s) 44, 762
Fnu4HI GCNGC 2 cut(s) 561, 1136
FokI GGATG 5 cut(s) 313, 317, 926, 976, 1103
FriOI GRGCYC 2 cut(s) 519, 1196
Fsp4HI GCNGC 2 cut(s) 561, 1136
FspBI CTAG 1 cut(s) 185
GlaI GCGC 1 cut(s) 90
GluI GCNGC 2 cut(s) 561, 1136
HaeIII GGCC 2 cut(s) 505, 1126
HapII CCGG 2 cut(s) 334, 1057
HgaI GACGC 1 cut(s) 1102
HhaI GCGC 1 cut(s) 91
Hin1I GRCGYC 1 cut(s) 1113
Hin1II CATG 7 cut(s) 101, 176, 514, 523, 1033, 1099, 1148
Hin6I GCGC 1 cut(s) 89
HinP1I GCGC 1 cut(s) 89
HinfI GANTC 6 cut(s) 26, 58, 261, 537, 870, 978
HpaII CCGG 2 cut(s) 334, 1057
HphI GGTGA 2 cut(s) 406, 1162
Hpy166II GTNNAC 5 cut(s) 45, 70, 667, 687, 763
Hpy188I TCNGA 1 cut(s) 933
Hpy188III TCNNGA 3 cut(s) 160, 376, 818
Hpy8I GTNNAC 5 cut(s) 45, 70, 667, 687, 763
HpyAV CCTTC 5 cut(s) 108, 251, 601, 798, 1063
HpyCH4III ACNGT 2 cut(s) 739, 899
HpyCH4IV ACGT 2 cut(s) 36, 588
HpyCH4V TGCA 5 cut(s) 97, 248, 289, 455, 490
HpyF10VI GCNNNNNNNGC 2 cut(s) 502, 1132
HpyF3I CTNAG 3 cut(s) 445, 500, 777
HpySE526I ACGT 2 cut(s) 36, 588
Hsp92I GRCGYC 1 cut(s) 1113
Hsp92II CATG 7 cut(s) 101, 176, 514, 523, 1033, 1099, 1148
HspAI GCGC 1 cut(s) 89
Kzo9I GATC 5 cut(s) 484, 780, 903, 1152, 1156
LguI GCTCTTC 1 cut(s) 650
LmnI GCTCC 2 cut(s) 514, 528
Lsp1109I GCAGC 2 cut(s) 547, 1147
LweI GCATC 1 cut(s) 442
MaeI CTAG 1 cut(s) 185
MaeII ACGT 2 cut(s) 36, 588
MaeIII GTNAC 1 cut(s) 434
MalI GATC 5 cut(s) 486, 782, 905, 1154, 1158
MboI GATC 5 cut(s) 484, 780, 903, 1152, 1156
MboII GAAGA 2 cut(s) 644, 667
MflI RGATCY 1 cut(s) 780
MhlI GDGCHC 4 cut(s) 519, 577, 602, 1196
MluCI AATT 2 cut(s) 155, 885
MlyI GAGTC 2 cut(s) 35, 864
MmeI TCCRAC 1 cut(s) 643
MnlI CCTC 6 cut(s) 239, 334, 349, 392, 495, 1127
MroXI GAANNNNTTC 1 cut(s) 825
MseI TTAA 2 cut(s) 18, 921
MspI CCGG 2 cut(s) 334, 1057
MspR9I CCNGG 6 cut(s) 268, 335, 534, 867, 1128, 1197
MvaI CCWGG 5 cut(s) 268, 534, 867, 1128, 1197
MwoI GCNNNNNNNGC 2 cut(s) 502, 1132
NciI CCSGG 1 cut(s) 335
NdeI CATATG 1 cut(s) 1172
NdeII GATC 5 cut(s) 484, 780, 903, 1152, 1156
NlaIII CATG 7 cut(s) 101, 176, 514, 523, 1033, 1099, 1148
NlaIV GGNNCC 2 cut(s) 516, 601
NmuCI GTSAC 1 cut(s) 434
PciSI GCTCTTC 1 cut(s) 650
PcsI WCGNNNNNNNCGW 1 cut(s) 1128
PdmI GAANNNNTTC 1 cut(s) 825
PfeI GAWTC 4 cut(s) 58, 261, 537, 978
PflMI CCANNNNNTGG 2 cut(s) 533, 1176
PkrI GCNGC 2 cut(s) 562, 1137
PleI GAGTC 2 cut(s) 34, 864
PpsI GAGTC 2 cut(s) 34, 864
PpuMI RGGWCCY 1 cut(s) 472
Psp5II RGGWCCY 1 cut(s) 472
Psp6I CCWGG 5 cut(s) 266, 532, 865, 1126, 1195
PspGI CCWGG 5 cut(s) 266, 532, 865, 1126, 1195
PspN4I GGNNCC 2 cut(s) 516, 601
PspPI GGNCC 2 cut(s) 472, 1124
PspPPI RGGWCCY 1 cut(s) 472
PsuI RGATCY 1 cut(s) 780
RsaI GTAC 1 cut(s) 71
RsaNI GTAC 1 cut(s) 70
SapI GCTCTTC 1 cut(s) 650
SaqAI TTAA 2 cut(s) 18, 921
SatI GCNGC 2 cut(s) 561, 1136
Sau3AI GATC 5 cut(s) 484, 780, 903, 1152, 1156
Sau96I GGNCC 2 cut(s) 472, 1124
SchI GAGTC 2 cut(s) 35, 864
ScrFI CCNGG 6 cut(s) 268, 335, 534, 867, 1128, 1197
SduI GDGCHC 4 cut(s) 519, 577, 602, 1196
SfaNI GCATC 1 cut(s) 442
SinI GGWCC 1 cut(s) 472
Sse9I AATT 2 cut(s) 155, 885
SsiI CCGC 2 cut(s) 1041, 1046
SspMI CTAG 1 cut(s) 185
StyD4I CCNGG 6 cut(s) 266, 333, 532, 865, 1126, 1195
StyI CCWWGG 1 cut(s) 568
TaaI ACNGT 2 cut(s) 739, 899
TaiI ACGT 2 cut(s) 39, 591
TaqI TCGA 3 cut(s) 9, 1061, 1155
TasI AATT 2 cut(s) 155, 885
TatI WGTACW 1 cut(s) 69
TfiI GAWTC 4 cut(s) 58, 261, 537, 978
Tru1I TTAA 2 cut(s) 18, 921
Tru9I TTAA 2 cut(s) 18, 921
TscAI CASTG 5 cut(s) 91, 128, 238, 318, 703
TseFI GTSAC 1 cut(s) 434
TseI GCWGC 2 cut(s) 560, 1135
Tsp45I GTSAC 1 cut(s) 434
TspDTI ATGAA 6 cut(s) 50, 544, 786, 823, 956, 1046
TspRI CASTG 5 cut(s) 91, 128, 238, 318, 703
Van91I CCANNNNNTGG 2 cut(s) 533, 1176
VpaK11BI GGWCC 1 cut(s) 472
XapI RAATTY 1 cut(s) 155
XmiI GTMKAC 2 cut(s) 44, 762
XmnI GAANNNNTTC 1 cut(s) 825
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.