Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0015213

Physical Location & Seq

Genomic Coordinates Forward (+)

4941823 .. 4945753

Gene Structure 3931 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g05960.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1749 bp

ATGTCGTCATTTGGGTTCCTATCTCCTCCTCCTATATCCTCCTCGGCTCCCACGAGGCAGCTCTCCGCAGCCACTACTCCGGCTGCGGCACCGATTGTCGCTCCGGACGTGGCTGCGGAGAGGCTGGAGCCGAGGGTGGAGGAGAGACAAGGGTATTGGGTGTTGAAGGAGAAGTTTCGACAAGGGATTAATGTTCAGGAGAAGGTCAAGATTCAGAGGGAGCCTATGAAGCTATATATGGAAGGCGGGATTGAAGAGCTTGCTAAGTTGCCTTTTGAGGAGCTTGACAAAGCTAAGGATACTAAGGATGATATTGATGTTAGGCTCAAGTGGCTTGGTCTCTTCCACAGAAGAAAGCATCACTATGGTAGATTTATGATGAGGCTGAAGCTTCCGAATGGGGTCACAACAAGTGCACAGACAAGATATCTAGCGAGTGTGATACGGAGATATGGCAAGGATGGTTGTGCAGATGTGACAACCAGGCAAAATTGGCAAATCCGCGGAATTGTGCTGGCAGATGTGCCTGATATTCTGAAGGGTCTTGCTGGAGTAGGATTGACTAGTCTGCAGAGTGGGATGGACAATGTGAGAAACCCAGTTGGGAATCCACTTGCAGGCATTGACCCGCATGAAATTGTTGACACAAGACCTTACACGAACTTGTTGTCCCAATACATTACTGGCAATTCACTCGGCAATCCAACTATAACAAACTTGCCAAGGAAGTGGAATGTGTGTGTGATAGGGTCTCATGATCTTTATGAGCATCCCCACATCAATGATCTTGCGTACATGCCTGCAACAAAGGATGGGAAATTTGGATTCAATTTACTCGTTGGAGGCTTCTTCAGTCCCAAAAGATGTGCAGAGGCAGTTCCTCTTGATGCATGGGTCTCAACTGAAGATATGATCCCAGTTTGCAAAGCTATTCTAGAGGCTTATAGAGACCTTGGATTCAGAGGCAACCGACAAAAGACAAGAATGATGTGGTTGATCGATGAACTAGGCATAGAAGGATTCAGATCAGAGGTTGTTAAGAGAATGCCCTTTAAGGAACTGGAAAGAGCATCTACTGAAGACTTGGTACAGAAGCAATGGGAAAGGAGAGACTATATAGGTGTCCATCCACAGAAACAAGAAGGTCTAAGCTTTGTGGGTCTTCACATTCCCGTAGGCAGGATCCAAGCAGATGACATGGATGAGCTAGCTCGTATAGCTGACGAGTATGGCACTGGGGAACTCCGTCTCACTGTGGAGCAAAACATTATTATCCCCAATGTTGAGAACACGAAACTCCAAGCATTGCTTCAAGAACCGCTTCTGAAAGAAAAATTTTCACCTGAACCTTCCATTCTCATGAAAGGACTAGTAGCTTGCACTGGCAACCAGTTTTGCGGCCAAGCCATCATCGAGACAAAGCAACGGGCCTTGAAGGTGACTGAGGAGGTGGAAAGGCATGTGTCAGTGACTCGGCCAGTGAGGATGCATTGGACGGGGTGCCCCAATACCTGCGGGCAGGTGCAAGTGGCAGATATAGGTTTCATGGGGTGTATGGCAAGGGATGAGAATGGAAAGCCTGTTGAAGGGGTTGATGTCTTCTTGGGAGGAAGAATAGGAAGTGACTCTCATTTGGGAGATATTTATAAGAAGAGTGTCCCTTGTAAGGACTTGGTGCCCTTAGTTATTGACATCTTGGTAAATCACTTTGGGGCTGTCCCAAGGGAGAGGGAAGAAGGGGAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0010035 GO:0010167 GO:0016020 GO:0016491 GO:0016661 GO:0016662 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0050421 GO:0050896 GO:0055114 GO:0098809 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

NIR_SIR NIR_SIR_ferr

Protein Analysis

583

Amino Acids

65.2

Weight (kDa)

6.54

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIR_SIR_ferr	PF03460	118 - 183	5.1e-17	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	194 - 351	1.9e-41	Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr	PF03460	376 - 440	2.9e-20	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	457 - 571	2.3e-11	Nitrite and sulphite reductase 4Fe-4S domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15620
fragaria_vesca	FvH4_2g05960
malus_domestica	MD05G1081500.v1.1
prunus_persica	Prupe.8G126000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0257431
rosa_laevigata	RLG00000014695
rosa_multiflora	Rmu_sc0000820.1_g000048 Rmu_sc0003301.1_g000002
rosa_roxburghii	Rroxscaffold_7G00208660 Rroxscaffold_7G00208680
rosa_rugosa	Rorug05G0572600
rosa_samantha	Rh6AG090100 Rh6BG081600 Rh6CG078100 Rh6DG073900
rosa_wichuraiana	Rw6G007870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1647
AarI	CACCTGC	1 cut(s)	1510
Acc36I	ACCTGC	2 cut(s)	1510, 1520
AccB1I	GGYRCC	3 cut(s)	88, 1500, 1675
AccII	CGCG	1 cut(s)	504
AccIII	TCCGGA	1 cut(s)	103
AclWI	GGATC	3 cut(s)	907, 1177, 1190
AcoI	YGGCCR	2 cut(s)	1399, 1475
AcsI	RAATTY	2 cut(s)	818, 1334
AcuI	CTGAAG	5 cut(s)	407, 557, 835, 924, 1098
AfaI	GTAC	2 cut(s)	794, 1089
AfiI	CCNNNNNNNGG	4 cut(s)	617, 1179, 1586, 1666
AgsI	TTSAA	6 cut(s)	166, 254, 829, 1313, 1435, 1586
AhlI	ACTAGT	2 cut(s)	563, 1369
AjiI	CACGTC	1 cut(s)	109
AjnI	CCWGG	1 cut(s)	482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1293, 1325
AloI	GAACNNNNNNTCC	2 cut(s)	653, 685
Alw21I	GWGCWC	1 cut(s)	418
Alw26I	GTCTC	8 cut(s)	139, 344, 756, 901, 942, 1104, 1253, 1409
Alw44I	GTGCAC	1 cut(s)	414
AlwI	GGATC	3 cut(s)	907, 1177, 1190
Aor13HI	TCCGGA	1 cut(s)	103
AoxI	GGCC	3 cut(s)	1399, 1428, 1475
ApaLI	GTGCAC	1 cut(s)	414
ApeKI	GCWGC	4 cut(s)	58, 68, 83, 113
ApoI	RAATTY	2 cut(s)	818, 1334
ArsI	GACNNNNNNTTYG	2 cut(s)	653, 685
AseI	ATTAAT	1 cut(s)	189
Asp700I	GAANNNNTTC	1 cut(s)	1320
AspS9I	GGNCC	1 cut(s)	1428
AsuHPI	GGTGA	2 cut(s)	1332, 1450
AsuNHI	GCTAGC	1 cut(s)	1207
BaeGI	GKGCMC	3 cut(s)	418, 1505, 1680
BamHI	GGATCC	1 cut(s)	1182
BanI	GGYRCC	3 cut(s)	88, 1500, 1675
BarI	GAAGNNNNNNTAC	2 cut(s)	1071, 1103
BauI	CACGAG	1 cut(s)	52
BbsI	GAAGAC	3 cut(s)	1086, 1154, 1591
Bbv12I	GWGCWC	1 cut(s)	418
BbvI	GCAGC	4 cut(s)	70, 70, 80, 100
BccI	CCATC	5 cut(s)	455, 574, 806, 1134, 1415
BcgI	CGANNNNNNTGC	2 cut(s)	676, 710
BciT130I	CCWGG	1 cut(s)	484
BciVI	GTATCC	1 cut(s)	292
BcoDI	GTCTC	8 cut(s)	139, 344, 756, 901, 942, 1104, 1253, 1409
BcuI	ACTAGT	2 cut(s)	563, 1369
BfaI	CTAG	6 cut(s)	431, 564, 935, 1007, 1208, 1370
BfmI	CTRYAG	1 cut(s)	569
BfuAI	ACCTGC	2 cut(s)	1510, 1520
BfuI	GTATCC	1 cut(s)	292
BisI	GCNGC	6 cut(s)	59, 69, 84, 87, 114, 1399
BlsI	GCNGC	6 cut(s)	60, 70, 85, 88, 115, 1400
Bme1390I	CCNGG	1 cut(s)	484
BmgBI	CACGTC	1 cut(s)	109
BmgT120I	GGNCC	1 cut(s)	1428
BmiI	GGNNCC	8 cut(s)	17, 48, 90, 129, 222, 1184, 1502, 1677
BmrFI	CCNGG	1 cut(s)	484
BmrI	ACTGGG	3 cut(s)	593, 911, 1245
BmsI	GCATC	5 cut(s)	367, 778, 877, 1079, 1476
BmtI	GCTAGC	1 cut(s)	1211
BmuI	ACTGGG	3 cut(s)	593, 911, 1245
BpiI	GAAGAC	3 cut(s)	1086, 1154, 1591
BpmI	CTGGAG	2 cut(s)	146, 570
Bpu10I	CCTNAGC	1 cut(s)	294
BpuEI	CTTGAG	1 cut(s)	311
Bsa29I	ATCGAT	1 cut(s)	999
BsaBI	GATNNNNATC	1 cut(s)	1024
BsaI	GGTCTC	4 cut(s)	344, 756, 901, 942
BsaJI	CCNNGG	6 cut(s)	42, 131, 502, 722, 952, 1721
BsaWI	WCCGGW	1 cut(s)	103
Bsc4I	CCNNNNNNNGG	4 cut(s)	617, 1179, 1586, 1666
Bse1I	ACTGG	8 cut(s)	599, 688, 917, 1065, 1240, 1387, 1390, 1478
Bse3DI	GCAATG	2 cut(s)	1103, 1304
Bse8I	GATNNNNATC	1 cut(s)	1024
BseAI	TCCGGA	1 cut(s)	103
BseBI	CCWGG	1 cut(s)	484
BseCI	ATCGAT	1 cut(s)	999
BseDI	CCNNGG	6 cut(s)	42, 131, 502, 722, 952, 1721
BseGI	GGATG	9 cut(s)	313, 466, 585, 769, 817, 1126, 1207, 1491, 1570
BseJI	GATNNNNATC	1 cut(s)	1024
BseLI	CCNNNNNNNGG	4 cut(s)	617, 1179, 1586, 1666
BseMI	GCAATG	2 cut(s)	1103, 1304
BseMII	CTCAG	1 cut(s)	1434
BseNI	ACTGG	8 cut(s)	599, 688, 917, 1065, 1240, 1387, 1390, 1478
BseRI	GAGGAG	6 cut(s)	15, 18, 31, 155, 293, 1460
BseSI	GKGCMC	3 cut(s)	418, 1505, 1680
BseXI	GCAGC	4 cut(s)	70, 70, 80, 100
BsgI	GTGCAG	2 cut(s)	489, 888
Bsh1236I	CGCG	1 cut(s)	504
BshFI	GGCC	3 cut(s)	1401, 1430, 1477
BshNI	GGYRCC	3 cut(s)	88, 1500, 1675
BshVI	ATCGAT	1 cut(s)	999
BsiHKAI	GWGCWC	1 cut(s)	418
BsiSI	CCGG	2 cut(s)	80, 104
BslFI	GGGAC	4 cut(s)	655, 840, 1643, 1703
BslI	CCNNNNNNNGG	4 cut(s)	617, 1179, 1586, 1666
BsmAI	GTCTC	8 cut(s)	139, 344, 756, 901, 942, 1104, 1253, 1409
BsmBI	CGTCTC	1 cut(s)	1253
BsmFI	GGGAC	4 cut(s)	655, 840, 1643, 1703
BsmI	GAATGC	1 cut(s)	1050
BsnI	GGCC	3 cut(s)	1401, 1430, 1477
Bso31I	GGTCTC	4 cut(s)	344, 756, 901, 942
Bsp1286I	GDGCHC	3 cut(s)	418, 1505, 1680
Bsp13I	TCCGGA	1 cut(s)	103
Bsp143I	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
BspANI	GGCC	3 cut(s)	1401, 1430, 1477
BspCNI	CTCAG	1 cut(s)	1435
BspDI	ATCGAT	1 cut(s)	999
BspEI	TCCGGA	1 cut(s)	103
BspFNI	CGCG	1 cut(s)	504
BspHI	TCATGA	2 cut(s)	754, 1359
BspLI	GGNNCC	8 cut(s)	17, 48, 90, 129, 222, 1184, 1502, 1677
BspMAI	CTGCAG	1 cut(s)	573
BspMI	ACCTGC	2 cut(s)	1510, 1520
BspOI	GCTAGC	1 cut(s)	1211
BspPI	GGATC	3 cut(s)	907, 1177, 1190
BspQI	GCTCTTC	1 cut(s)	249
BspT107I	GGYRCC	3 cut(s)	88, 1500, 1675
BspTNI	GGTCTC	4 cut(s)	344, 756, 901, 942
BsrDI	GCAATG	2 cut(s)	1103, 1304
BsrI	ACTGG	8 cut(s)	599, 688, 917, 1065, 1240, 1387, 1390, 1478
BssECI	CCNNGG	6 cut(s)	42, 131, 502, 722, 952, 1721
BssMI	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
BssSI	CACGAG	1 cut(s)	52
BssT1I	CCWWGG	3 cut(s)	722, 952, 1721
Bst2BI	CACGAG	1 cut(s)	52
Bst2UI	CCWGG	1 cut(s)	484
Bst4CI	ACNGT	1 cut(s)	1255
Bst6I	CTCTTC	4 cut(s)	249, 347, 1646, 1737
BstC8I	GCNNGC	7 cut(s)	261, 516, 619, 801, 1209, 1378, 1517
BstDEI	CTNAG	6 cut(s)	264, 294, 303, 1148, 1443, 1681
BstDSI	CCRYGG	1 cut(s)	502
BstENI	CCTNNNNNAGG	1 cut(s)	1584
BstF5I	GGATG	9 cut(s)	313, 466, 585, 769, 817, 1126, 1207, 1491, 1570
BstFNI	CGCG	1 cut(s)	504
BstKTI	GATC	6 cut(s)	760, 787, 915, 999, 1028, 1185
BstMAI	GTCTC	8 cut(s)	139, 344, 756, 901, 942, 1104, 1253, 1409
BstMBI	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
BstMWI	GCNNNNNNNGC	4 cut(s)	229, 331, 493, 1217
BstNI	CCWGG	1 cut(s)	484
BstNSI	RCATGY	2 cut(s)	799, 1463
BstSCI	CCNGG	1 cut(s)	482
BstSFI	CTRYAG	1 cut(s)	569
BstSLI	GKGCMC	3 cut(s)	418, 1505, 1680
BstUI	CGCG	1 cut(s)	504
BstV1I	GCAGC	4 cut(s)	70, 70, 80, 100
BstV2I	GAAGAC	3 cut(s)	1086, 1154, 1591
BstX2I	RGATCY	1 cut(s)	1182
BstXI	CCANNNNNNTGG	1 cut(s)	729
BstYI	RGATCY	1 cut(s)	1182
Bsu15I	ATCGAT	1 cut(s)	999
BsuI	GTATCC	1 cut(s)	292
BsuRI	GGCC	3 cut(s)	1401, 1430, 1477
BsuTUI	ATCGAT	1 cut(s)	999
BtgI	CCRYGG	1 cut(s)	502
BtrI	CACGTC	1 cut(s)	109
BtsCI	GGATG	9 cut(s)	313, 466, 585, 769, 817, 1126, 1207, 1491, 1570
BtsIMutI	CAGTG	5 cut(s)	1233, 1251, 1380, 1473, 1485
BveI	ACCTGC	2 cut(s)	1510, 1520
Cac8I	GCNNGC	7 cut(s)	261, 516, 619, 801, 1209, 1378, 1517
CciI	TCATGA	2 cut(s)	754, 1359
Cfr13I	GGNCC	1 cut(s)	1428
Cfr42I	CCGCGG	1 cut(s)	505
ClaI	ATCGAT	1 cut(s)	999
Csp6I	GTAC	2 cut(s)	793, 1088
CviAII	CATG	8 cut(s)	632, 755, 796, 891, 1198, 1360, 1460, 1546
CviQI	GTAC	2 cut(s)	793, 1088
DdeI	CTNAG	6 cut(s)	264, 294, 303, 1148, 1443, 1681
DpnI	GATC	6 cut(s)	759, 786, 914, 998, 1027, 1184
DpnII	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
EaeI	YGGCCR	2 cut(s)	1399, 1475
Eam1104I	CTCTTC	4 cut(s)	249, 347, 1646, 1737
EarI	CTCTTC	4 cut(s)	249, 347, 1646, 1737
Eco130I	CCWWGG	3 cut(s)	722, 952, 1721
Eco31I	GGTCTC	4 cut(s)	344, 756, 901, 942
Eco32I	GATATC	1 cut(s)	428
Eco57I	CTGAAG	5 cut(s)	407, 557, 835, 924, 1098
EcoNI	CCTNNNNNAGG	1 cut(s)	1584
EcoRII	CCWGG	1 cut(s)	482
EcoRV	GATATC	1 cut(s)	428
EcoT14I	CCWWGG	3 cut(s)	722, 952, 1721
EcoT22I	ATGCAT	2 cut(s)	892, 1491
ErhI	CCWWGG	3 cut(s)	722, 952, 1721
Esp3I	CGTCTC	1 cut(s)	1253
FaeI	CATG	8 cut(s)	635, 758, 799, 894, 1201, 1363, 1463, 1549
FalI	AAGNNNNNCTT	4 cut(s)	1293, 1325, 1305, 1337
FaqI	GGGAC	4 cut(s)	655, 840, 1643, 1703
FatI	CATG	8 cut(s)	631, 754, 795, 890, 1197, 1359, 1459, 1545
FauI	CCCGC	3 cut(s)	239, 636, 1508
Fnu4HI	GCNGC	6 cut(s)	59, 69, 84, 87, 114, 1399
FokI	GGATG	9 cut(s)	320, 473, 592, 756, 824, 1113, 1214, 1498, 1577
Fsp4HI	GCNGC	6 cut(s)	59, 69, 84, 87, 114, 1399
FspBI	CTAG	6 cut(s)	431, 564, 935, 1007, 1208, 1370
GluI	GCNGC	6 cut(s)	59, 69, 84, 87, 114, 1399
GsuI	CTGGAG	2 cut(s)	146, 570
HaeIII	GGCC	3 cut(s)	1401, 1430, 1477
HapII	CCGG	2 cut(s)	80, 104
Hin1II	CATG	8 cut(s)	635, 758, 799, 894, 1201, 1363, 1463, 1549
HincII	GTYRAC	1 cut(s)	643
HindII	GTYRAC	1 cut(s)	643
HindIII	AAGCTT	2 cut(s)	389, 1150
HinfI	GANTC	7 cut(s)	211, 607, 825, 957, 1020, 1471, 1625
HpaII	CCGG	2 cut(s)	80, 104
HphI	GGTGA	2 cut(s)	1332, 1450
Hpy166II	GTNNAC	2 cut(s)	416, 643
Hpy188I	TCNGA	7 cut(s)	216, 396, 537, 962, 1025, 1030, 1326
Hpy188III	TCNNGA	9 cut(s)	104, 197, 208, 755, 884, 935, 1313, 1360, 1414
Hpy8I	GTNNAC	2 cut(s)	416, 643
HpyCH4III	ACNGT	1 cut(s)	1255
HpyCH4IV	ACGT	1 cut(s)	108
HpyF10VI	GCNNNNNNNGC	4 cut(s)	229, 331, 493, 1217
HpyF3I	CTNAG	6 cut(s)	264, 294, 303, 1148, 1443, 1681
HpySE526I	ACGT	1 cut(s)	108
Hsp92II	CATG	8 cut(s)	635, 758, 799, 894, 1201, 1363, 1463, 1549
Kpn2I	TCCGGA	1 cut(s)	103
KspI	CCGCGG	1 cut(s)	505
Kzo9I	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
LguI	GCTCTTC	1 cut(s)	249
LmnI	GCTCC	6 cut(s)	52, 106, 127, 220, 280, 1258
Lsp1109I	GCAGC	4 cut(s)	70, 70, 80, 100
LweI	GCATC	5 cut(s)	367, 778, 877, 1079, 1476
MaeI	CTAG	6 cut(s)	431, 564, 935, 1007, 1208, 1370
MaeII	ACGT	1 cut(s)	108
MaeIII	GTNAC	5 cut(s)	403, 475, 1438, 1468, 1622
MalI	GATC	6 cut(s)	759, 786, 914, 998, 1027, 1184
MboI	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
MflI	RGATCY	1 cut(s)	1182
MhlI	GDGCHC	3 cut(s)	418, 1505, 1680
MluCI	AATT	7 cut(s)	490, 507, 636, 688, 818, 829, 1334
MlyI	GAGTC	2 cut(s)	1465, 1619
MmeI	TCCRAC	2 cut(s)	728, 820
Mph1103I	ATGCAT	2 cut(s)	892, 1491
MroI	TCCGGA	1 cut(s)	103
MroXI	GAANNNNTTC	1 cut(s)	1320
MseI	TTAA	3 cut(s)	189, 1038, 1053
MslI	CAYNNNNRTG	3 cut(s)	363, 780, 1358
MspA1I	CMGCKG	1 cut(s)	504
MspI	CCGG	2 cut(s)	80, 104
MspR9I	CCNGG	1 cut(s)	484
Mva1269I	GAATGC	1 cut(s)	1050
MvaI	CCWGG	1 cut(s)	484
MvnI	CGCG	1 cut(s)	504
MwoI	GCNNNNNNNGC	4 cut(s)	229, 331, 493, 1217
NdeII	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
NheI	GCTAGC	1 cut(s)	1207
NlaIII	CATG	8 cut(s)	635, 758, 799, 894, 1201, 1363, 1463, 1549
NlaIV	GGNNCC	8 cut(s)	17, 48, 90, 129, 222, 1184, 1502, 1677
NmeAIII	GCCGAG	4 cut(s)	23, 156, 675, 1453
NmuCI	GTSAC	5 cut(s)	403, 475, 1438, 1468, 1622
NsiI	ATGCAT	2 cut(s)	892, 1491
NspI	RCATGY	2 cut(s)	799, 1463
PagI	TCATGA	2 cut(s)	754, 1359
PaqCI	CACCTGC	1 cut(s)	1510
PciSI	GCTCTTC	1 cut(s)	249
PcsI	WCGNNNNNNNCGW	2 cut(s)	50, 105
PctI	GAATGC	1 cut(s)	1050
PdmI	GAANNNNTTC	1 cut(s)	1320
PfeI	GAWTC	5 cut(s)	211, 607, 825, 957, 1020
PkrI	GCNGC	6 cut(s)	60, 70, 85, 88, 115, 1400
PleI	GAGTC	2 cut(s)	1465, 1619
PpsI	GAGTC	2 cut(s)	1465, 1619
PshBI	ATTAAT	1 cut(s)	189
PsiI	TTATAA	1 cut(s)	1647
Psp6I	CCWGG	1 cut(s)	482
PspGI	CCWGG	1 cut(s)	482
PspN4I	GGNNCC	8 cut(s)	17, 48, 90, 129, 222, 1184, 1502, 1677
PspPI	GGNCC	1 cut(s)	1428
PstI	CTGCAG	1 cut(s)	573
PsuI	RGATCY	1 cut(s)	1182
RsaI	GTAC	2 cut(s)	794, 1089
RsaNI	GTAC	2 cut(s)	793, 1088
RseI	CAYNNNNRTG	3 cut(s)	363, 780, 1358
SacII	CCGCGG	1 cut(s)	505
SapI	GCTCTTC	1 cut(s)	249
SaqAI	TTAA	3 cut(s)	189, 1038, 1053
SatI	GCNGC	6 cut(s)	59, 69, 84, 87, 114, 1399
Sau3AI	GATC	6 cut(s)	757, 784, 912, 996, 1025, 1182
Sau96I	GGNCC	1 cut(s)	1428
SchI	GAGTC	2 cut(s)	1465, 1619
ScrFI	CCNGG	1 cut(s)	484
SduI	GDGCHC	3 cut(s)	418, 1505, 1680
SfaNI	GCATC	5 cut(s)	367, 778, 877, 1079, 1476
SfcI	CTRYAG	1 cut(s)	569
Sfr303I	CCGCGG	1 cut(s)	505
SgrBI	CCGCGG	1 cut(s)	505
SmiMI	CAYNNNNRTG	3 cut(s)	363, 780, 1358
SmlI	CTYRAG	1 cut(s)	326
SmoI	CTYRAG	1 cut(s)	326
SpeI	ACTAGT	2 cut(s)	563, 1369
Sse9I	AATT	7 cut(s)	490, 507, 636, 688, 818, 829, 1334
SspMI	CTAG	6 cut(s)	431, 564, 935, 1007, 1208, 1370
StyD4I	CCNGG	1 cut(s)	482
StyI	CCWWGG	3 cut(s)	722, 952, 1721
TaaI	ACNGT	1 cut(s)	1255
TaiI	ACGT	1 cut(s)	111
TaqI	TCGA	3 cut(s)	178, 999, 1413
TasI	AATT	7 cut(s)	490, 507, 636, 688, 818, 829, 1334
TauI	GCSGC	2 cut(s)	89, 1401
TfiI	GAWTC	5 cut(s)	211, 607, 825, 957, 1020
Tru1I	TTAA	3 cut(s)	189, 1038, 1053
Tru9I	TTAA	3 cut(s)	189, 1038, 1053
TscAI	CASTG	5 cut(s)	1240, 1258, 1387, 1473, 1485
TseFI	GTSAC	5 cut(s)	403, 475, 1438, 1468, 1622
TseI	GCWGC	4 cut(s)	58, 68, 83, 113
Tsp45I	GTSAC	5 cut(s)	403, 475, 1438, 1468, 1622
TspDTI	ATGAA	5 cut(s)	242, 648, 1017, 1376, 1534
TspGWI	ACGGA	2 cut(s)	460, 1235
TspRI	CASTG	5 cut(s)	1240, 1258, 1387, 1473, 1485
VneI	GTGCAC	1 cut(s)	414
VspI	ATTAAT	1 cut(s)	189
XagI	CCTNNNNNAGG	1 cut(s)	1584
XapI	RAATTY	2 cut(s)	818, 1334
XbaI	TCTAGA	1 cut(s)	934
XceI	RCATGY	2 cut(s)	799, 1463
XcmI	CCANNNNNNNNNTGG	1 cut(s)	680
XmnI	GAANNNNTTC	1 cut(s)	1320
XspI	CTAG	6 cut(s)	431, 564, 935, 1007, 1208, 1370
Zsp2I	ATGCAT	2 cut(s)	892, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.