Prupe.8G126000_v2.0.a1

Ferredoxin-nitrite reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0015213
Physical Location & Seq
Reverse (-)
15056933 .. 15060044
3112 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G126000.1

Sequence Viewer

Length: 1758 bp
ATGTCATCATCACTATCTGTTCAGTTTCTTTCTCCTCCCCTGTCTTCAGCTCTCCCCTGCTGCAAGCAGACGAGGCTAGCAGCCGCCACCACCCCCCTGGCGCCGGTTTCCAAGAATGTGGAGGCTGCCAGGTTGGAGCCTAGAGTGGAGGAGAGAGATGGGTATTGGGTTTTGAAAGAGAAGTTTAGAGGAGGGATTAATGTTCAGGAGAAGGTGAAGATTCAGAAGGAACCCATGAAGCTTTTCATGGAAAATGGGATTGAAGAGCTTGCCAAGACTTCTTTTGAGGAGCTTGAGAAGTCTAAGGATAGTAAGGATGATATTGATGGCAGGCTCAAGTGGCTTGGCCTTTTCCACAGGAGAAAGAATCATTATGGTAGATTTATGATGAGACTGAAGCTACCAAATGGAGTTACAACAAGTGCACAAACAAAATATCTAGCGAGCGTGATAAGAAAATATGGTGAGGATGGTTGTGCGGATGTTACAACCAGGCAAAATTGGCAAATCCGGGGAGTGGTACTGCCTGATGTGCCAGAAATTCTAAAAGGTCTCGCTAAGGTTGGCTTGACAAGTCTGCAGAGTGGCATGGACAATGTGAGAAACCCAGTTGGAAATCCTCTCGCCGGAATCGACCCCGAAGAGATTGTTGATACACGACCTTACACAAACTTGCTGTCCCAATATATCACTGCCAATTCACTTGGCAATCCTACTGTCACAAACTTGCCAAGAAAGTGGAATGTGTGTGTGGTGGGATCTCATGATCTTTTTGAGCATCCCCACATCAACGATCTCGCTTACATGCCTGCAACAAAGGACGGAAGATTTGGATTCAATTTGCTTGTGGGAGGCTTCTTTAGTCCTAAACGGTGTGCAGAGGCAGTTCCTCTTGATGCCTGGGTCTCCGCAGATGATGTGATCCCACTTTGCAAAGCAGTGCTAGAGGCCTATAGAGACCTTGGCACCAGAGGGAACCGACAGAAGACGAGAATGATGTGGTTGATTGATGAACTAGGCATAGAAGGATTCAGGGCAGAGGTTGCAAAAAGGATGCCTTTTCAAGAGCTGGAGAGAGCATCTTCTGAAGACCTGGTTCAGAAGCAATGGGAAAGGAGAGACTACGTAGGTGTCCATCCACAAAAACAAGAAGGTCTAAGCTACGTGGGACTTCACATTCCAGTCGGCCGGCTCCAAGCAGATGACATGGATGAGCTAGCTCACGTAGCTGACAAGTATGGCACAGGGGAACTCCGGCTCACTGTGGAGCAAAACATAATAATCCCAAATGTTGAGAACTCAAAACTTGAAGCATTGCTTAAAGAGCCTCTTCTGAAAAACAGATTTTCACCTGAACCTTCAATTCTCATGAGAGGATTGGTGGCCTGCACTGGCAACCAGTTCTGTGGACAAGCCATCATTGAGACCAAGGCCAGGGCCTTGAAGGTGACAGAGGAGGTGGAGAGACACGTGGCAGTGACCCGACCGGTGAGGATGCATTGGACCGGGTGCCCAAACACCTGCGCGCAGGTGCAAGTGGCGGATATTGGTTTCATGGGATGCATGGCAAGGGATGAGAATGGGAAGCCTTGTGAAGGGGCTGATGTTTTCTTGGGAGGGAGGATAGGAAGTGACTCACATTTGGGAGATGTTTATAAAAAGAGTGTCCCTTGCAAGGACTTGGTGCCTTTGGTTGTTGACATTTTGGTAAAGCACTTTGGAGCTGTCCCTAGAGAGAGGGAAGAAGGGGAAGATTAA

Protein Analysis

586

Amino Acids

65.26

Weight (kDa)

6.88

Isoelectric Point (pI)

36.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015213)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15620
fragaria_vesca FvH4_2g05960
malus_domestica MD05G1081500.v1.1
prunus_persica Prupe.8G126000_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0257431
rosa_laevigata RLG00000014695
rosa_multiflora Rmu_sc0000820.1_g000048 Rmu_sc0003301.1_g000002
rosa_roxburghii Rroxscaffold_7G00208660 Rroxscaffold_7G00208680
rosa_rugosa Rorug05G0572600
rosa_samantha Rh6AG090100 Rh6BG081600 Rh6CG078100 Rh6DG073900
rosa_wichuraiana Rw6G007870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1656
AarI CACCTGC 2 cut(s) 1519, 1529
Acc36I ACCTGC 2 cut(s) 1519, 1529
AccB1I GGYRCC 4 cut(s) 100, 965, 1509, 1684
AccII CGCG 1 cut(s) 1526
AciI CCGC 4 cut(s) 84, 479, 909, 1541
AclWI GGATC 2 cut(s) 766, 916
AcoI YGGCCR 1 cut(s) 1186
AcsI RAATTY 1 cut(s) 540
AcuI CTGAAG 3 cut(s) 30, 416, 1107
AcvI CACGTG 1 cut(s) 1471
AcyI GRCGYC 1 cut(s) 101
AfaI GTAC 1 cut(s) 522
AfiI CCNNNNNNNGG 6 cut(s) 103, 517, 626, 1434, 1595, 1675
AflIII ACRYGT 1 cut(s) 1468
AgeI ACCGGT 1 cut(s) 1486
AgsI TTSAA 7 cut(s) 175, 263, 838, 1064, 1310, 1362, 1444
AjnI CCWGG 6 cut(s) 96, 128, 491, 899, 1092, 1433
Alw21I GWGCWC 1 cut(s) 427
Alw26I GTCTC 7 cut(s) 385, 557, 910, 951, 1113, 1418, 1459
Alw44I GTGCAC 1 cut(s) 423
AlwI GGATC 2 cut(s) 766, 916
AoxI GGCC 6 cut(s) 346, 948, 1186, 1383, 1431, 1437
ApaLI GTGCAC 1 cut(s) 423
ApeKI GCWGC 3 cut(s) 60, 80, 125
ApoI RAATTY 1 cut(s) 540
ArsI GACNNNNNNTTYG 4 cut(s) 662, 694, 812, 844
AseI ATTAAT 1 cut(s) 198
AsiGI ACCGGT 1 cut(s) 1486
Asp700I GAANNNNTTC 1 cut(s) 242
AspLEI GCGC 3 cut(s) 103, 1526, 1528
AspS9I GGNCC 2 cut(s) 1437, 1503
AsuC2I CCSGG 2 cut(s) 512, 1507
AsuHPI GGTGA 5 cut(s) 226, 476, 1341, 1459, 1501
AsuNHI GCTAGC 2 cut(s) 76, 1216
AvaII GGWCC 1 cut(s) 1503
BaeGI GKGCMC 2 cut(s) 427, 1514
BanI GGYRCC 4 cut(s) 100, 965, 1509, 1684
BbrPI CACGTG 1 cut(s) 1471
BbsI GAAGAC 3 cut(s) 36, 992, 1095
Bbv12I GWGCWC 1 cut(s) 427
BbvI GCAGC 3 cut(s) 47, 92, 112
BccI CCATC 5 cut(s) 152, 320, 464, 1143, 1424
BciT130I CCWGG 6 cut(s) 98, 130, 493, 901, 1094, 1435
BcnI CCSGG 2 cut(s) 512, 1507
BcoDI GTCTC 7 cut(s) 385, 557, 910, 951, 1113, 1418, 1459
BfaI CTAG 7 cut(s) 77, 141, 440, 944, 1016, 1217, 1731
BfmI CTRYAG 2 cut(s) 578, 952
BfoI RGCGCY 1 cut(s) 104
BfuAI ACCTGC 2 cut(s) 1519, 1529
BisI GCNGC 4 cut(s) 61, 81, 84, 126
BlsI GCNGC 4 cut(s) 62, 82, 85, 127
Bme1390I CCNGG 8 cut(s) 98, 130, 493, 512, 901, 1094, 1435, 1507
Bme18I GGWCC 1 cut(s) 1503
BmgT120I GGNCC 2 cut(s) 1437, 1503
BmiI GGNNCC 8 cut(s) 102, 138, 231, 967, 977, 1193, 1511, 1686
BmrFI CCNGG 8 cut(s) 98, 130, 493, 512, 901, 1094, 1435, 1507
BmrI ACTGGG 1 cut(s) 602
BmsI GCATC 6 cut(s) 787, 886, 1044, 1088, 1485, 1550
BmtI GCTAGC 2 cut(s) 80, 1220
BmuI ACTGGG 1 cut(s) 602
BpiI GAAGAC 3 cut(s) 36, 992, 1095
BpmI CTGGAG 1 cut(s) 1091
Bpu10I CCTNAGC 1 cut(s) 558
BpuEI CTTGAG 2 cut(s) 314, 320
BpuMI CCSGG 2 cut(s) 512, 1507
BsaAI YACGTR 4 cut(s) 1126, 1165, 1225, 1471
BsaHI GRCGYC 1 cut(s) 101
BsaI GGTCTC 4 cut(s) 557, 910, 951, 1418
BsaJI CCNNGG 6 cut(s) 96, 511, 900, 961, 1428, 1434
BsaWI WCCGGW 1 cut(s) 1486
Bsc4I CCNNNNNNNGG 6 cut(s) 103, 517, 626, 1434, 1595, 1675
Bse118I RCCGGY 3 cut(s) 103, 1188, 1486
Bse1I ACTGG 4 cut(s) 608, 1181, 1396, 1399
Bse3DI GCAATG 2 cut(s) 1112, 1313
BseBI CCWGG 6 cut(s) 98, 130, 493, 901, 1094, 1435
BseDI CCNNGG 6 cut(s) 96, 511, 900, 961, 1428, 1434
BseLI CCNNNNNNNGG 6 cut(s) 103, 517, 626, 1434, 1595, 1675
BseMI GCAATG 2 cut(s) 1112, 1313
BseNI ACTGG 4 cut(s) 608, 1181, 1396, 1399
BsePI GCGCGC 1 cut(s) 1524
BseRI GAGGAG 5 cut(s) 24, 164, 204, 302, 1469
BseSI GKGCMC 2 cut(s) 427, 1514
BseX3I CGGCCG 1 cut(s) 1186
BseXI GCAGC 3 cut(s) 47, 92, 112
BsgI GTGCAG 2 cut(s) 897, 1372
Bsh1236I CGCG 1 cut(s) 1526
Bsh1285I CGRYCG 2 cut(s) 1189, 1487
BshFI GGCC 6 cut(s) 348, 950, 1188, 1385, 1433, 1439
BshNI GGYRCC 4 cut(s) 100, 965, 1509, 1684
BshTI ACCGGT 1 cut(s) 1486
BsiEI CGRYCG 2 cut(s) 1189, 1487
BsiHKAI GWGCWC 1 cut(s) 427
BsiSI CCGG 7 cut(s) 104, 511, 627, 1189, 1255, 1487, 1506
BslFI GGGAC 4 cut(s) 664, 1182, 1652, 1712
BslI CCNNNNNNNGG 6 cut(s) 103, 517, 626, 1434, 1595, 1675
BsmAI GTCTC 7 cut(s) 385, 557, 910, 951, 1113, 1418, 1459
BsmFI GGGAC 4 cut(s) 664, 1182, 1652, 1712
BsnI GGCC 6 cut(s) 348, 950, 1188, 1385, 1433, 1439
Bso31I GGTCTC 4 cut(s) 557, 910, 951, 1418
Bsp1286I GDGCHC 2 cut(s) 427, 1514
Bsp143I GATC 4 cut(s) 758, 766, 793, 921
BspACI CCGC 4 cut(s) 84, 479, 909, 1541
BspANI GGCC 6 cut(s) 348, 950, 1188, 1385, 1433, 1439
BspFNI CGCG 1 cut(s) 1526
BspHI TCATGA 2 cut(s) 763, 1368
BspLI GGNNCC 8 cut(s) 102, 138, 231, 967, 977, 1193, 1511, 1686
BspMAI CTGCAG 1 cut(s) 582
BspMI ACCTGC 2 cut(s) 1519, 1529
BspOI GCTAGC 2 cut(s) 80, 1220
BspPI GGATC 2 cut(s) 766, 916
BspQI GCTCTTC 1 cut(s) 258
BspT107I GGYRCC 4 cut(s) 100, 965, 1509, 1684
BspTNI GGTCTC 4 cut(s) 557, 910, 951, 1418
BsrDI GCAATG 2 cut(s) 1112, 1313
BsrFI RCCGGY 3 cut(s) 103, 1188, 1486
BsrI ACTGG 4 cut(s) 608, 1181, 1396, 1399
BssAI RCCGGY 3 cut(s) 103, 1188, 1486
BssECI CCNNGG 6 cut(s) 96, 511, 900, 961, 1428, 1434
BssHII GCGCGC 1 cut(s) 1524
BssMI GATC 4 cut(s) 758, 766, 793, 921
BssNI GRCGYC 1 cut(s) 101
BssT1I CCWWGG 2 cut(s) 961, 1428
Bst2UI CCWGG 6 cut(s) 98, 130, 493, 901, 1094, 1435
Bst4CI ACNGT 3 cut(s) 718, 873, 1264
Bst6I CTCTTC 3 cut(s) 258, 636, 1335
BstACI GRCGYC 1 cut(s) 101
BstAPI GCANNNNNTGC 1 cut(s) 1043
BstBAI YACGTR 4 cut(s) 1126, 1165, 1225, 1471
BstDEI CTNAG 3 cut(s) 303, 558, 1157
BstENI CCTNNNNNAGG 1 cut(s) 1593
BstFNI CGCG 1 cut(s) 1526
BstH2I RGCGCY 1 cut(s) 104
BstHHI GCGC 3 cut(s) 103, 1526, 1528
BstKTI GATC 4 cut(s) 761, 769, 796, 924
BstMAI GTCTC 7 cut(s) 385, 557, 910, 951, 1113, 1418, 1459
BstMBI GATC 4 cut(s) 758, 766, 793, 921
BstMCI CGRYCG 2 cut(s) 1189, 1487
BstMWI GCNNNNNNNGC 7 cut(s) 73, 340, 502, 532, 1043, 1226, 1324
BstNI CCWGG 6 cut(s) 98, 130, 493, 901, 1094, 1435
BstNSI RCATGY 1 cut(s) 808
BstSCI CCNGG 8 cut(s) 96, 128, 491, 510, 899, 1092, 1433, 1505
BstSFI CTRYAG 2 cut(s) 578, 952
BstSLI GKGCMC 2 cut(s) 427, 1514
BstSNI TACGTA 1 cut(s) 1126
BstUI CGCG 1 cut(s) 1526
BstV1I GCAGC 3 cut(s) 47, 92, 112
BstV2I GAAGAC 3 cut(s) 36, 992, 1095
BstX2I RGATCY 1 cut(s) 758
BstXI CCANNNNNNTGG 4 cut(s) 97, 118, 738, 1406
BstYI RGATCY 1 cut(s) 758
BstZI CGGCCG 1 cut(s) 1186
BsuRI GGCC 6 cut(s) 348, 950, 1188, 1385, 1433, 1439
BtsI GCAGTG 3 cut(s) 690, 945, 1482
BtsIMutI CAGTG 5 cut(s) 690, 945, 1260, 1389, 1482
BveI ACCTGC 2 cut(s) 1519, 1529
CciI TCATGA 2 cut(s) 763, 1368
CfoI GCGC 3 cut(s) 103, 1526, 1528
Cfr10I RCCGGY 3 cut(s) 103, 1188, 1486
Cfr13I GGNCC 2 cut(s) 1437, 1503
CsiI ACCWGGT 1 cut(s) 1092
Csp6I GTAC 1 cut(s) 521
CspAI ACCGGT 1 cut(s) 1486
CviAII CATG 9 cut(s) 235, 247, 589, 764, 805, 1207, 1369, 1555, 1564
CviQI GTAC 1 cut(s) 521
DdeI CTNAG 3 cut(s) 303, 558, 1157
DinI GGCGCC 1 cut(s) 102
DpnI GATC 4 cut(s) 760, 768, 795, 923
DpnII GATC 4 cut(s) 758, 766, 793, 921
EaeI YGGCCR 1 cut(s) 1186
EagI CGGCCG 1 cut(s) 1186
Eam1104I CTCTTC 3 cut(s) 258, 636, 1335
EarI CTCTTC 3 cut(s) 258, 636, 1335
EciI GGCGGA 1 cut(s) 1556
EclXI CGGCCG 1 cut(s) 1186
Eco105I TACGTA 1 cut(s) 1126
Eco130I CCWWGG 2 cut(s) 961, 1428
Eco147I AGGCCT 1 cut(s) 950
Eco31I GGTCTC 4 cut(s) 557, 910, 951, 1418
Eco47I GGWCC 1 cut(s) 1503
Eco52I CGGCCG 1 cut(s) 1186
Eco57I CTGAAG 3 cut(s) 30, 416, 1107
Eco72I CACGTG 1 cut(s) 1471
EcoNI CCTNNNNNAGG 1 cut(s) 1593
EcoO109I RGGNCCY 1 cut(s) 1437
EcoRII CCWGG 6 cut(s) 96, 128, 491, 899, 1092, 1433
EcoT14I CCWWGG 2 cut(s) 961, 1428
EcoT22I ATGCAT 2 cut(s) 1500, 1565
EgeI GGCGCC 1 cut(s) 102
EheI GGCGCC 1 cut(s) 102
ErhI CCWWGG 2 cut(s) 961, 1428
FaeI CATG 9 cut(s) 238, 250, 592, 767, 808, 1210, 1372, 1558, 1567
FalI AAGNNNNNCTT 8 cut(s) 551, 583, 1042, 1074, 1302, 1334, 1314, 1346
FaqI GGGAC 4 cut(s) 664, 1182, 1652, 1712
FatI CATG 9 cut(s) 234, 246, 588, 763, 804, 1206, 1368, 1554, 1563
Fnu4HI GCNGC 4 cut(s) 61, 81, 84, 126
Fsp4HI GCNGC 4 cut(s) 61, 81, 84, 126
FspBI CTAG 7 cut(s) 77, 141, 440, 944, 1016, 1217, 1731
GlaI GCGC 3 cut(s) 102, 1525, 1527
GluI GCNGC 4 cut(s) 61, 81, 84, 126
GsuI CTGGAG 1 cut(s) 1091
HaeII RGCGCY 1 cut(s) 104
HaeIII GGCC 6 cut(s) 348, 950, 1188, 1385, 1433, 1439
HapII CCGG 7 cut(s) 104, 511, 627, 1189, 1255, 1487, 1506
HhaI GCGC 3 cut(s) 103, 1526, 1528
Hin1I GRCGYC 1 cut(s) 101
Hin1II CATG 9 cut(s) 238, 250, 592, 767, 808, 1210, 1372, 1558, 1567
Hin6I GCGC 3 cut(s) 101, 1524, 1526
HinP1I GCGC 3 cut(s) 101, 1524, 1526
HincII GTYRAC 1 cut(s) 1699
HindII GTYRAC 1 cut(s) 1699
HindIII AAGCTT 1 cut(s) 239
HinfI GANTC 6 cut(s) 220, 367, 630, 834, 1029, 1634
HpaII CCGG 7 cut(s) 104, 511, 627, 1189, 1255, 1487, 1506
HphI GGTGA 5 cut(s) 226, 476, 1341, 1459, 1501
Hpy166II GTNNAC 3 cut(s) 425, 1409, 1699
Hpy188I TCNGA 4 cut(s) 225, 1087, 1101, 1335
Hpy188III TCNNGA 5 cut(s) 206, 764, 893, 1064, 1369
Hpy8I GTNNAC 3 cut(s) 425, 1409, 1699
HpyAV CCTTC 8 cut(s) 205, 220, 1019, 1145, 1368, 1438, 1589, 1739
HpyCH4III ACNGT 3 cut(s) 718, 873, 1264
HpyCH4IV ACGT 4 cut(s) 1125, 1164, 1224, 1470
HpyF10VI GCNNNNNNNGC 7 cut(s) 73, 340, 502, 532, 1043, 1226, 1324
HpyF3I CTNAG 3 cut(s) 303, 558, 1157
HpySE526I ACGT 4 cut(s) 1125, 1164, 1224, 1470
Hsp92I GRCGYC 1 cut(s) 101
Hsp92II CATG 9 cut(s) 238, 250, 592, 767, 808, 1210, 1372, 1558, 1567
HspAI GCGC 3 cut(s) 101, 1524, 1526
KasI GGCGCC 1 cut(s) 100
KroI GCCGGC 1 cut(s) 1188
KroNI GCCGGC 1 cut(s) 1190
Kzo9I GATC 4 cut(s) 758, 766, 793, 921
LguI GCTCTTC 1 cut(s) 258
LmnI GCTCC 5 cut(s) 136, 289, 1197, 1267, 1721
Lsp1109I GCAGC 3 cut(s) 47, 92, 112
LweI GCATC 6 cut(s) 787, 886, 1044, 1088, 1485, 1550
MabI ACCWGGT 1 cut(s) 1092
MaeI CTAG 7 cut(s) 77, 141, 440, 944, 1016, 1217, 1731
MaeII ACGT 4 cut(s) 1125, 1164, 1224, 1470
MaeIII GTNAC 6 cut(s) 412, 484, 718, 1447, 1477, 1631
MalI GATC 4 cut(s) 760, 768, 795, 923
MboI GATC 4 cut(s) 758, 766, 793, 921
MflI RGATCY 1 cut(s) 758
MhlI GDGCHC 2 cut(s) 427, 1514
MluCI AATT 5 cut(s) 499, 540, 697, 838, 1362
Mly113I GGCGCC 1 cut(s) 101
MlyI GAGTC 1 cut(s) 1628
MmeI TCCRAC 2 cut(s) 114, 592
Mph1103I ATGCAT 2 cut(s) 1500, 1565
MroNI GCCGGC 1 cut(s) 1188
MroXI GAANNNNTTC 1 cut(s) 242
MseI TTAA 3 cut(s) 198, 1320, 1756
MspI CCGG 7 cut(s) 104, 511, 627, 1189, 1255, 1487, 1506
MspR9I CCNGG 8 cut(s) 98, 130, 493, 512, 901, 1094, 1435, 1507
MvaI CCWGG 6 cut(s) 98, 130, 493, 901, 1094, 1435
MvnI CGCG 1 cut(s) 1526
MwoI GCNNNNNNNGC 7 cut(s) 73, 340, 502, 532, 1043, 1226, 1324
NaeI GCCGGC 1 cut(s) 1190
NarI GGCGCC 1 cut(s) 101
NciI CCSGG 2 cut(s) 512, 1507
NdeII GATC 4 cut(s) 758, 766, 793, 921
NgoMIV GCCGGC 1 cut(s) 1188
NheI GCTAGC 2 cut(s) 76, 1216
NlaIII CATG 9 cut(s) 238, 250, 592, 767, 808, 1210, 1372, 1558, 1567
NlaIV GGNNCC 8 cut(s) 102, 138, 231, 967, 977, 1193, 1511, 1686
NmuCI GTSAC 4 cut(s) 718, 1447, 1477, 1631
NsiI ATGCAT 2 cut(s) 1500, 1565
NspI RCATGY 1 cut(s) 808
PagI TCATGA 2 cut(s) 763, 1368
PaqCI CACCTGC 2 cut(s) 1519, 1529
PauI GCGCGC 1 cut(s) 1524
PceI AGGCCT 1 cut(s) 950
PciSI GCTCTTC 1 cut(s) 258
PcsI WCGNNNNNNNCGW 1 cut(s) 630
PdiI GCCGGC 1 cut(s) 1190
PdmI GAANNNNTTC 1 cut(s) 242
PfeI GAWTC 5 cut(s) 220, 367, 630, 834, 1029
PinAI ACCGGT 1 cut(s) 1486
PkrI GCNGC 4 cut(s) 62, 82, 85, 127
PleI GAGTC 1 cut(s) 1628
PluTI GGCGCC 1 cut(s) 104
PmaCI CACGTG 1 cut(s) 1471
PmlI CACGTG 1 cut(s) 1471
PpsI GAGTC 1 cut(s) 1628
Ppu21I YACGTR 4 cut(s) 1126, 1165, 1225, 1471
PshBI ATTAAT 1 cut(s) 198
PsiI TTATAA 1 cut(s) 1656
Psp6I CCWGG 6 cut(s) 96, 128, 491, 899, 1092, 1433
PspCI CACGTG 1 cut(s) 1471
PspGI CCWGG 6 cut(s) 96, 128, 491, 899, 1092, 1433
PspN4I GGNNCC 8 cut(s) 102, 138, 231, 967, 977, 1193, 1511, 1686
PspPI GGNCC 2 cut(s) 1437, 1503
PstI CTGCAG 1 cut(s) 582
PsuI RGATCY 1 cut(s) 758
PteI GCGCGC 1 cut(s) 1524
RsaI GTAC 1 cut(s) 522
RsaNI GTAC 1 cut(s) 521
SapI GCTCTTC 1 cut(s) 258
SaqAI TTAA 3 cut(s) 198, 1320, 1756
SatI GCNGC 4 cut(s) 61, 81, 84, 126
Sau3AI GATC 4 cut(s) 758, 766, 793, 921
Sau96I GGNCC 2 cut(s) 1437, 1503
SchI GAGTC 1 cut(s) 1628
ScrFI CCNGG 8 cut(s) 98, 130, 493, 512, 901, 1094, 1435, 1507
SduI GDGCHC 2 cut(s) 427, 1514
SexAI ACCWGGT 1 cut(s) 1092
SfaNI GCATC 6 cut(s) 787, 886, 1044, 1088, 1485, 1550
SfcI CTRYAG 2 cut(s) 578, 952
SfoI GGCGCC 1 cut(s) 102
SinI GGWCC 1 cut(s) 1503
SmlI CTYRAG 2 cut(s) 293, 335
SmoI CTYRAG 2 cut(s) 293, 335
SnaBI TACGTA 1 cut(s) 1126
Sse9I AATT 5 cut(s) 499, 540, 697, 838, 1362
SseBI AGGCCT 1 cut(s) 950
SsiI CCGC 4 cut(s) 84, 479, 909, 1541
SspDI GGCGCC 1 cut(s) 100
SspMI CTAG 7 cut(s) 77, 141, 440, 944, 1016, 1217, 1731
StuI AGGCCT 1 cut(s) 950
StyD4I CCNGG 8 cut(s) 96, 128, 491, 510, 899, 1092, 1433, 1505
StyI CCWWGG 2 cut(s) 961, 1428
TaaI ACNGT 3 cut(s) 718, 873, 1264
TaiI ACGT 4 cut(s) 1128, 1167, 1227, 1473
TaqI TCGA 1 cut(s) 633
TasI AATT 5 cut(s) 499, 540, 697, 838, 1362
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 5 cut(s) 220, 367, 630, 834, 1029
Tru1I TTAA 3 cut(s) 198, 1320, 1756
Tru9I TTAA 3 cut(s) 198, 1320, 1756
TscAI CASTG 5 cut(s) 697, 945, 1267, 1396, 1482
TseFI GTSAC 4 cut(s) 718, 1447, 1477, 1631
TseI GCWGC 3 cut(s) 60, 80, 125
Tsp45I GTSAC 4 cut(s) 718, 1447, 1477, 1631
TspDTI ATGAA 4 cut(s) 235, 251, 1026, 1543
TspGWI ACGGA 1 cut(s) 837
TspRI CASTG 5 cut(s) 697, 945, 1267, 1396, 1482
VneI GTGCAC 1 cut(s) 423
VpaK11BI GGWCC 1 cut(s) 1503
VspI ATTAAT 1 cut(s) 198
XagI CCTNNNNNAGG 1 cut(s) 1593
XapI RAATTY 1 cut(s) 540
XceI RCATGY 1 cut(s) 808
XcmI CCANNNNNNNNNTGG 1 cut(s) 94
XmnI GAANNNNTTC 1 cut(s) 242
XspI CTAG 7 cut(s) 77, 141, 440, 944, 1016, 1217, 1731
Zsp2I ATGCAT 2 cut(s) 1500, 1565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.