No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03170 |
| fragaria_vesca | FvH4_2g09740 |
| malus_domestica | MD05G1060500.v1.1 MD10G1068400.v1.1 |
| prunus_persica | Prupe.8G090300_v2.0.a1 |
| pyrus_communis | pycom10g05430 |
| rosa_chinensis | RchiOBHm_Chr6g0266031 |
| rosa_multiflora | Rmu_sc0000776.1_g000023 |
| rosa_roxburghii | Rroxscaffold_174G00435150 Rroxscaffold_7G00202050 |
| rosa_rugosa | Rorug06G0022900 |
| rosa_samantha | Rh6AG144000 Rh6BG144500 Rh6CG141000 Rh6DG128900 |
| rosa_wichuraiana | Rw6G012440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 247 |
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AdeI | CACNNNGTG | 1 cut(s) | 284 |
| AfaI | GTAC | 2 cut(s) | 92, 262 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 72, 287 |
| AluBI | AGCT | 1 cut(s) | 224 |
| AluI | AGCT | 1 cut(s) | 224 |
| Alw21I | GWGCWC | 1 cut(s) | 49 |
| Alw44I | GTGCAC | 1 cut(s) | 45 |
| AoxI | GGCC | 1 cut(s) | 126 |
| ApaLI | GTGCAC | 1 cut(s) | 45 |
| AsuHPI | GGTGA | 1 cut(s) | 29 |
| BaeGI | GKGCMC | 1 cut(s) | 49 |
| BbsI | GAAGAC | 1 cut(s) | 53 |
| Bbv12I | GWGCWC | 1 cut(s) | 49 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 26, 60 |
| BfaI | CTAG | 2 cut(s) | 143, 258 |
| BglII | AGATCT | 1 cut(s) | 148 |
| BmrI | ACTGGG | 1 cut(s) | 262 |
| BmsI | GCATC | 2 cut(s) | 128, 163 |
| BmuI | ACTGGG | 1 cut(s) | 262 |
| BpiI | GAAGAC | 1 cut(s) | 53 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BsaAI | YACGTR | 1 cut(s) | 120 |
| BsaWI | WCCGGW | 2 cut(s) | 72, 160 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 72, 287 |
| Bse1I | ACTGG | 1 cut(s) | 268 |
| BseGI | GGATG | 1 cut(s) | 166 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 72, 287 |
| BseNI | ACTGG | 1 cut(s) | 268 |
| BseRI | GAGGAG | 1 cut(s) | 225 |
| BseSI | GKGCMC | 1 cut(s) | 49 |
| BshFI | GGCC | 1 cut(s) | 128 |
| BsiHKAI | GWGCWC | 1 cut(s) | 49 |
| BsiSI | CCGG | 2 cut(s) | 73, 161 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 72, 287 |
| BsnI | GGCC | 1 cut(s) | 128 |
| Bsp1286I | GDGCHC | 1 cut(s) | 49 |
| Bsp143I | GATC | 2 cut(s) | 110, 148 |
| BspANI | GGCC | 1 cut(s) | 128 |
| BsrI | ACTGG | 1 cut(s) | 268 |
| BssMI | GATC | 2 cut(s) | 110, 148 |
| BstBAI | YACGTR | 1 cut(s) | 120 |
| BstDEI | CTNAG | 1 cut(s) | 50 |
| BstF5I | GGATG | 1 cut(s) | 166 |
| BstKTI | GATC | 2 cut(s) | 113, 151 |
| BstMBI | GATC | 2 cut(s) | 110, 148 |
| BstNSI | RCATGY | 1 cut(s) | 246 |
| BstSLI | GKGCMC | 1 cut(s) | 49 |
| BstV2I | GAAGAC | 1 cut(s) | 53 |
| BstX2I | RGATCY | 1 cut(s) | 148 |
| BstYI | RGATCY | 1 cut(s) | 148 |
| BsuRI | GGCC | 1 cut(s) | 128 |
| BtsCI | GGATG | 1 cut(s) | 166 |
| Csp6I | GTAC | 2 cut(s) | 91, 261 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 253, 288 |
| CviAII | CATG | 4 cut(s) | 10, 40, 124, 243 |
| CviJI | RGCY | 2 cut(s) | 128, 224 |
| CviKI_1 | RGCY | 2 cut(s) | 128, 224 |
| CviQI | GTAC | 2 cut(s) | 91, 261 |
| DdeI | CTNAG | 1 cut(s) | 50 |
| DpnI | GATC | 2 cut(s) | 112, 150 |
| DpnII | GATC | 2 cut(s) | 110, 148 |
| DraIII | CACNNNGTG | 1 cut(s) | 284 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| FaeI | CATG | 4 cut(s) | 13, 43, 127, 246 |
| FaiI | YATR | 6 cut(s) | 11, 41, 125, 195, 229, 244 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 194, 226 |
| FatI | CATG | 4 cut(s) | 9, 39, 123, 242 |
| FblI | GTMKAC | 1 cut(s) | 247 |
| FokI | GGATG | 1 cut(s) | 153 |
| FspBI | CTAG | 2 cut(s) | 143, 258 |
| HaeIII | GGCC | 1 cut(s) | 128 |
| HapII | CCGG | 2 cut(s) | 73, 161 |
| Hin1II | CATG | 4 cut(s) | 13, 43, 127, 246 |
| HincII | GTYRAC | 1 cut(s) | 248 |
| HindII | GTYRAC | 1 cut(s) | 248 |
| HpaII | CCGG | 2 cut(s) | 73, 161 |
| HphI | GGTGA | 1 cut(s) | 29 |
| Hpy166II | GTNNAC | 2 cut(s) | 47, 248 |
| Hpy188I | TCNGA | 1 cut(s) | 137 |
| Hpy188III | TCNNGA | 3 cut(s) | 99, 154, 170 |
| Hpy8I | GTNNAC | 2 cut(s) | 47, 248 |
| Hpy99I | CGWCG | 1 cut(s) | 252 |
| HpyAV | CCTTC | 1 cut(s) | 8 |
| HpyCH4IV | ACGT | 2 cut(s) | 24, 119 |
| HpyCH4V | TGCA | 3 cut(s) | 47, 123, 242 |
| HpyF3I | CTNAG | 1 cut(s) | 50 |
| HpySE526I | ACGT | 2 cut(s) | 24, 119 |
| Hsp92II | CATG | 4 cut(s) | 13, 43, 127, 246 |
| Kzo9I | GATC | 2 cut(s) | 110, 148 |
| LmnI | GCTCC | 1 cut(s) | 229 |
| LpnPI | CCDG | 6 cut(s) | 84, 86, 174, 228, 234, 281 |
| LweI | GCATC | 2 cut(s) | 128, 163 |
| MaeI | CTAG | 2 cut(s) | 143, 258 |
| MaeII | ACGT | 2 cut(s) | 24, 119 |
| MaeIII | GTNAC | 1 cut(s) | 17 |
| MalI | GATC | 2 cut(s) | 112, 150 |
| MboI | GATC | 2 cut(s) | 110, 148 |
| MboII | GAAGA | 5 cut(s) | 53, 158, 199, 214, 217 |
| MflI | RGATCY | 1 cut(s) | 148 |
| MhlI | GDGCHC | 1 cut(s) | 49 |
| MnlI | CCTC | 4 cut(s) | 71, 177, 243, 246 |
| MslI | CAYNNNNRTG | 2 cut(s) | 118, 171 |
| MspI | CCGG | 2 cut(s) | 73, 161 |
| NdeII | GATC | 2 cut(s) | 110, 148 |
| NlaIII | CATG | 4 cut(s) | 13, 43, 127, 246 |
| NmuCI | GTSAC | 1 cut(s) | 17 |
| NspI | RCATGY | 1 cut(s) | 246 |
| Ppu21I | YACGTR | 1 cut(s) | 120 |
| PsuI | RGATCY | 1 cut(s) | 148 |
| RsaI | GTAC | 2 cut(s) | 92, 262 |
| RsaNI | GTAC | 2 cut(s) | 91, 261 |
| RseI | CAYNNNNRTG | 2 cut(s) | 118, 171 |
| SalI | GTCGAC | 1 cut(s) | 246 |
| Sau3AI | GATC | 2 cut(s) | 110, 148 |
| SduI | GDGCHC | 1 cut(s) | 49 |
| SetI | ASST | 7 cut(s) | 9, 19, 27, 56, 92, 122, 226 |
| SfaNI | GCATC | 2 cut(s) | 128, 163 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 118, 171 |
| SmlI | CTYRAG | 1 cut(s) | 152 |
| SmoI | CTYRAG | 1 cut(s) | 152 |
| SspMI | CTAG | 2 cut(s) | 143, 258 |
| TaiI | ACGT | 2 cut(s) | 27, 122 |
| TaqI | TCGA | 2 cut(s) | 36, 247 |
| TseFI | GTSAC | 1 cut(s) | 17 |
| Tsp45I | GTSAC | 1 cut(s) | 17 |
| TspGWI | ACGGA | 1 cut(s) | 212 |
| VneI | GTGCAC | 1 cut(s) | 45 |
| XceI | RCATGY | 1 cut(s) | 246 |
| XmiI | GTMKAC | 1 cut(s) | 247 |
| XspI | CTAG | 2 cut(s) | 143, 258 |