Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22800 AT5G22800 |
| fragaria_vesca | FvH4_2g16070 |
| malus_domestica | MD10G1133000.v1.1 MD10G1133100.v1.1 |
| prunus_persica | Prupe.8G174300_v2.0.a1 Prupe.8G174300_v2.0.a1 Prupe.8G174300_v2.0.a1 |
| pyrus_communis | pycom10g11480 |
| rosa_chinensis | RchiOBHm_Chr6g0279751 |
| rosa_laevigata | RLG00000013124 |
| rosa_multiflora | Rmu_sc0001719.1_g000016 |
| rosa_roxburghii | Rroxscaffold_7G00188700 |
| rosa_rugosa | Rorug06G0127500 |
| rosa_samantha | Rh6AG235900 Rh6BG240100 Rh6CG242200 Rh6DG233800 |
| rosa_wichuraiana | Rw6G020560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 118 |
| AccI | GTMKAC | 2 cut(s) | 108, 2541 |
| AccIII | TCCGGA | 1 cut(s) | 1330 |
| AciI | CCGC | 7 cut(s) | 48, 72, 777, 1053, 1085, 2807, 2895 |
| AclWI | GGATC | 1 cut(s) | 2744 |
| AcsI | RAATTY | 4 cut(s) | 905, 1388, 1418, 1697 |
| AcuI | CTGAAG | 4 cut(s) | 32, 559, 980, 2541 |
| AcyI | GRCGYC | 1 cut(s) | 115 |
| AdeI | CACNNNGTG | 1 cut(s) | 1637 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 311, 836, 1000, 1888 |
| AflII | CTTAAG | 1 cut(s) | 2066 |
| AflIII | ACRYGT | 1 cut(s) | 2305 |
| AhlI | ACTAGT | 2 cut(s) | 277, 2674 |
| AjnI | CCWGG | 8 cut(s) | 191, 972, 1582, 1623, 1870, 2320, 2779, 2818 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 83, 115, 2783, 2815 |
| AleI | CACNNNNGTG | 1 cut(s) | 201 |
| Alw21I | GWGCWC | 1 cut(s) | 1319 |
| AlwI | GGATC | 1 cut(s) | 2744 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 198, 254, 1694, 2645 |
| Aor13HI | TCCGGA | 1 cut(s) | 1330 |
| AoxI | GGCC | 3 cut(s) | 291, 970, 2861 |
| ApoI | RAATTY | 4 cut(s) | 905, 1388, 1418, 1697 |
| AseI | ATTAAT | 1 cut(s) | 1326 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1419 |
| AspS9I | GGNCC | 4 cut(s) | 771, 788, 797, 2861 |
| AsuHPI | GGTGA | 3 cut(s) | 1886, 2456, 2795 |
| AvaII | GGWCC | 3 cut(s) | 771, 788, 797 |
| BaeGI | GKGCMC | 2 cut(s) | 58, 1952 |
| BanII | GRGCYC | 1 cut(s) | 2774 |
| BbsI | GAAGAC | 4 cut(s) | 687, 1055, 1884, 2905 |
| Bbv12I | GWGCWC | 1 cut(s) | 1319 |
| BccI | CCATC | 6 cut(s) | 834, 917, 1151, 1247, 1748, 2193 |
| BceAI | ACGGC | 3 cut(s) | 113, 312, 1217 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 67, 101 |
| BciT130I | CCWGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| BclI | TGATCA | 1 cut(s) | 1090 |
| BcuI | ACTAGT | 2 cut(s) | 277, 2674 |
| BfaI | CTAG | 6 cut(s) | 237, 278, 1082, 1970, 2586, 2675 |
| BfmI | CTRYAG | 6 cut(s) | 109, 199, 633, 1554, 2268, 2865 |
| BfrI | CTTAAG | 1 cut(s) | 2066 |
| BlpI | GCTNAGC | 1 cut(s) | 2871 |
| BmcAI | AGTACT | 1 cut(s) | 2673 |
| Bme1390I | CCNGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| Bme18I | GGWCC | 3 cut(s) | 771, 788, 797 |
| BmgT120I | GGNCC | 4 cut(s) | 771, 788, 797, 2861 |
| BmiI | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| BmrFI | CCNGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| BmrI | ACTGGG | 1 cut(s) | 972 |
| BmuI | ACTGGG | 1 cut(s) | 972 |
| BpiI | GAAGAC | 4 cut(s) | 687, 1055, 1884, 2905 |
| BpmI | CTGGAG | 4 cut(s) | 175, 995, 2436, 2802 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2025, 2913 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2871 |
| BpuEI | CTTGAG | 1 cut(s) | 2079 |
| BsaAI | YACGTR | 3 cut(s) | 506, 2306, 2378 |
| BsaBI | GATNNNNATC | 2 cut(s) | 825, 1758 |
| BsaHI | GRCGYC | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 7 cut(s) | 43, 294, 1623, 1653, 1870, 2634, 2819 |
| BsaWI | WCCGGW | 2 cut(s) | 1330, 1762 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 311, 836, 1000, 1888 |
| Bse1I | ACTGG | 6 cut(s) | 142, 610, 790, 967, 1231, 2112 |
| Bse3DI | GCAATG | 2 cut(s) | 40, 2280 |
| Bse8I | GATNNNNATC | 2 cut(s) | 825, 1758 |
| BseAI | TCCGGA | 1 cut(s) | 1330 |
| BseBI | CCWGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| BseDI | CCNNGG | 7 cut(s) | 43, 294, 1623, 1653, 1870, 2634, 2819 |
| BseGI | GGATG | 9 cut(s) | 536, 826, 1093, 1239, 1258, 1339, 1759, 2008, 2695 |
| BseJI | GATNNNNATC | 2 cut(s) | 825, 1758 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 311, 836, 1000, 1888 |
| BseMI | GCAATG | 2 cut(s) | 40, 2280 |
| BseMII | CTCAG | 7 cut(s) | 230, 819, 822, 2026, 2361, 2925, 2927 |
| BseNI | ACTGG | 6 cut(s) | 142, 610, 790, 967, 1231, 2112 |
| BseRI | GAGGAG | 2 cut(s) | 1425, 2570 |
| BseSI | GKGCMC | 2 cut(s) | 58, 1952 |
| BsgI | GTGCAG | 3 cut(s) | 1614, 1686, 2046 |
| BshFI | GGCC | 3 cut(s) | 293, 972, 2863 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1319 |
| BsiSI | CCGG | 3 cut(s) | 1331, 1763, 2753 |
| BslFI | GGGAC | 1 cut(s) | 2362 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 311, 836, 1000, 1888 |
| BsmFI | GGGAC | 1 cut(s) | 2362 |
| BsmI | GAATGC | 2 cut(s) | 432, 2810 |
| BsnI | GGCC | 3 cut(s) | 293, 972, 2863 |
| Bsp1286I | GDGCHC | 4 cut(s) | 58, 1319, 1952, 2774 |
| Bsp13I | TCCGGA | 1 cut(s) | 1330 |
| Bsp1407I | TGTACA | 3 cut(s) | 256, 1393, 1912 |
| Bsp143I | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2871 |
| Bsp19I | CCATGG | 2 cut(s) | 43, 1653 |
| BspACI | CCGC | 7 cut(s) | 48, 72, 777, 1053, 1085, 2807, 2895 |
| BspANI | GGCC | 3 cut(s) | 293, 972, 2863 |
| BspCNI | CTCAG | 7 cut(s) | 229, 818, 823, 2025, 2362, 2926, 2926 |
| BspEI | TCCGGA | 1 cut(s) | 1330 |
| BspLI | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| BspMAI | CTGCAG | 1 cut(s) | 203 |
| BspPI | GGATC | 1 cut(s) | 2744 |
| BspTI | CTTAAG | 1 cut(s) | 2066 |
| BsrDI | GCAATG | 2 cut(s) | 40, 2280 |
| BsrGI | TGTACA | 3 cut(s) | 256, 1393, 1912 |
| BsrI | ACTGG | 6 cut(s) | 142, 610, 790, 967, 1231, 2112 |
| BssECI | CCNNGG | 7 cut(s) | 43, 294, 1623, 1653, 1870, 2634, 2819 |
| BssMI | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| BssNI | GRCGYC | 1 cut(s) | 115 |
| BssT1I | CCWWGG | 4 cut(s) | 43, 294, 1653, 2634 |
| Bst2UI | CCWGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| Bst4CI | ACNGT | 6 cut(s) | 160, 261, 406, 634, 2123, 2165 |
| Bst6I | CTCTTC | 2 cut(s) | 1359, 2292 |
| BstACI | GRCGYC | 1 cut(s) | 115 |
| BstAFI | CTTAAG | 1 cut(s) | 2066 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1637, 2003 |
| BstAUI | TGTACA | 3 cut(s) | 256, 1393, 1912 |
| BstBAI | YACGTR | 3 cut(s) | 506, 2306, 2378 |
| BstC8I | GCNNGC | 4 cut(s) | 7, 1134, 2022, 3001 |
| BstDSI | CCRYGG | 2 cut(s) | 43, 1653 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 998 |
| BstF5I | GGATG | 9 cut(s) | 536, 826, 1093, 1239, 1258, 1339, 1759, 2008, 2695 |
| BstKTI | GATC | 6 cut(s) | 856, 1093, 1126, 1852, 2752, 2969 |
| BstMBI | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 39, 488, 1061, 1637, 2003, 2258, 2447, 2636 |
| BstNI | CCWGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| BstSCI | CCNGG | 8 cut(s) | 191, 972, 1582, 1623, 1870, 2320, 2779, 2818 |
| BstSFI | CTRYAG | 6 cut(s) | 109, 199, 633, 1554, 2268, 2865 |
| BstSLI | GKGCMC | 2 cut(s) | 58, 1952 |
| BstSNI | TACGTA | 1 cut(s) | 506 |
| BstV2I | GAAGAC | 4 cut(s) | 687, 1055, 1884, 2905 |
| BstX2I | RGATCY | 1 cut(s) | 2749 |
| BstYI | RGATCY | 1 cut(s) | 2749 |
| BsuRI | GGCC | 3 cut(s) | 293, 972, 2863 |
| BtgI | CCRYGG | 2 cut(s) | 43, 1653 |
| BtgZI | GCGATG | 1 cut(s) | 2202 |
| BtsCI | GGATG | 9 cut(s) | 536, 826, 1093, 1239, 1258, 1339, 1759, 2008, 2695 |
| BtsI | GCAGTG | 3 cut(s) | 196, 208, 2004 |
| Cac8I | GCNNGC | 4 cut(s) | 7, 1134, 2022, 3001 |
| CaiI | CAGNNNCTG | 4 cut(s) | 198, 254, 1694, 2645 |
| Cfr13I | GGNCC | 4 cut(s) | 771, 788, 797, 2861 |
| CseI | GACGC | 1 cut(s) | 1604 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 498, 533, 1447, 1482, 1530, 1565 |
| CviAII | CATG | 8 cut(s) | 44, 618, 710, 792, 801, 1654, 1853, 2354 |
| DpnI | GATC | 6 cut(s) | 855, 1092, 1125, 1851, 2751, 2968 |
| DpnII | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| DraIII | CACNNNGTG | 1 cut(s) | 1637 |
| Eam1104I | CTCTTC | 2 cut(s) | 1359, 2292 |
| EarI | CTCTTC | 2 cut(s) | 1359, 2292 |
| EciI | GGCGGA | 1 cut(s) | 2910 |
| Eco105I | TACGTA | 1 cut(s) | 506 |
| Eco130I | CCWWGG | 4 cut(s) | 43, 294, 1653, 2634 |
| Eco24I | GRGCYC | 1 cut(s) | 2774 |
| Eco47I | GGWCC | 3 cut(s) | 771, 788, 797 |
| Eco57I | CTGAAG | 4 cut(s) | 32, 559, 980, 2541 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 998 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2861 |
| EcoRI | GAATTC | 1 cut(s) | 905 |
| EcoRII | CCWGG | 8 cut(s) | 191, 972, 1582, 1623, 1870, 2320, 2779, 2818 |
| EcoT14I | CCWWGG | 4 cut(s) | 43, 294, 1653, 2634 |
| EcoT22I | ATGCAT | 1 cut(s) | 1501 |
| EcoT38I | GRGCYC | 1 cut(s) | 2774 |
| ErhI | CCWWGG | 4 cut(s) | 43, 294, 1653, 2634 |
| FaeI | CATG | 8 cut(s) | 47, 621, 713, 795, 804, 1657, 1856, 2357 |
| FaqI | GGGAC | 1 cut(s) | 2362 |
| FatI | CATG | 8 cut(s) | 43, 617, 709, 791, 800, 1653, 1852, 2353 |
| FauI | CCCGC | 2 cut(s) | 41, 79 |
| FauNDI | CATATG | 1 cut(s) | 1519 |
| FbaI | TGATCA | 1 cut(s) | 1090 |
| FblI | GTMKAC | 2 cut(s) | 108, 2541 |
| FokI | GGATG | 9 cut(s) | 523, 813, 1100, 1246, 1265, 1346, 1766, 2015, 2702 |
| FriOI | GRGCYC | 1 cut(s) | 2774 |
| FspBI | CTAG | 6 cut(s) | 237, 278, 1082, 1970, 2586, 2675 |
| GsuI | CTGGAG | 4 cut(s) | 175, 995, 2436, 2802 |
| HaeIII | GGCC | 3 cut(s) | 293, 972, 2863 |
| HapII | CCGG | 3 cut(s) | 1331, 1763, 2753 |
| HgaI | GACGC | 1 cut(s) | 1604 |
| Hin1I | GRCGYC | 1 cut(s) | 115 |
| Hin1II | CATG | 8 cut(s) | 47, 621, 713, 795, 804, 1657, 1856, 2357 |
| HincII | GTYRAC | 1 cut(s) | 96 |
| HindII | GTYRAC | 1 cut(s) | 96 |
| HindIII | AAGCTT | 1 cut(s) | 693 |
| HpaII | CCGG | 3 cut(s) | 1331, 1763, 2753 |
| HphI | GGTGA | 3 cut(s) | 1886, 2456, 2795 |
| Hpy166II | GTNNAC | 7 cut(s) | 96, 109, 929, 1942, 2105, 2542, 2611 |
| Hpy8I | GTNNAC | 7 cut(s) | 96, 109, 929, 1942, 2105, 2542, 2611 |
| Hpy99I | CGWCG | 2 cut(s) | 120, 333 |
| HpyAV | CCTTC | 9 cut(s) | 71, 315, 592, 994, 1004, 1206, 1265, 1775, 2785 |
| HpyCH4III | ACNGT | 6 cut(s) | 160, 261, 406, 634, 2123, 2165 |
| HpyCH4IV | ACGT | 6 cut(s) | 115, 355, 505, 1561, 2305, 2377 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 39, 488, 1061, 1637, 2003, 2258, 2447, 2636 |
| HpySE526I | ACGT | 6 cut(s) | 115, 355, 505, 1561, 2305, 2377 |
| Hsp92I | GRCGYC | 1 cut(s) | 115 |
| Hsp92II | CATG | 8 cut(s) | 47, 621, 713, 795, 804, 1657, 1856, 2357 |
| Kpn2I | TCCGGA | 1 cut(s) | 1330 |
| Ksp22I | TGATCA | 1 cut(s) | 1090 |
| Kzo9I | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| LmnI | GCTCC | 5 cut(s) | 21, 622, 779, 976, 1274 |
| MaeI | CTAG | 6 cut(s) | 237, 278, 1082, 1970, 2586, 2675 |
| MaeII | ACGT | 6 cut(s) | 115, 355, 505, 1561, 2305, 2377 |
| MaeIII | GTNAC | 3 cut(s) | 1928, 2527, 2559 |
| MalI | GATC | 6 cut(s) | 855, 1092, 1125, 1851, 2751, 2968 |
| MboI | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| MfeI | CAATTG | 1 cut(s) | 1137 |
| MflI | RGATCY | 1 cut(s) | 2749 |
| MhlI | GDGCHC | 4 cut(s) | 58, 1319, 1952, 2774 |
| MlyI | GAGTC | 3 cut(s) | 2004, 2344, 2427 |
| Mph1103I | ATGCAT | 1 cut(s) | 1501 |
| MroI | TCCGGA | 1 cut(s) | 1330 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1419 |
| MseI | TTAA | 7 cut(s) | 438, 941, 1326, 1370, 1644, 2067, 2193 |
| MslI | CAYNNNNRTG | 2 cut(s) | 201, 1131 |
| MspA1I | CMGCKG | 4 cut(s) | 653, 777, 2494, 2759 |
| MspCI | CTTAAG | 1 cut(s) | 2066 |
| MspI | CCGG | 3 cut(s) | 1331, 1763, 2753 |
| MspR9I | CCNGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| MunI | CAATTG | 1 cut(s) | 1137 |
| Mva1269I | GAATGC | 2 cut(s) | 432, 2810 |
| MvaI | CCWGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 39, 488, 1061, 1637, 2003, 2258, 2447, 2636 |
| NcoI | CCATGG | 2 cut(s) | 43, 1653 |
| NdeI | CATATG | 1 cut(s) | 1519 |
| NdeII | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| NlaIII | CATG | 8 cut(s) | 47, 621, 713, 795, 804, 1657, 1856, 2357 |
| NlaIV | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| NsiI | ATGCAT | 1 cut(s) | 1501 |
| OliI | CACNNNNGTG | 1 cut(s) | 201 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 538 |
| PctI | GAATGC | 2 cut(s) | 432, 2810 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1419 |
| PfeI | GAWTC | 7 cut(s) | 317, 990, 1105, 1829, 2681, 2705, 2938 |
| PleI | GAGTC | 3 cut(s) | 2004, 2344, 2426 |
| PpsI | GAGTC | 3 cut(s) | 2004, 2344, 2426 |
| Ppu21I | YACGTR | 3 cut(s) | 506, 2306, 2378 |
| PshBI | ATTAAT | 1 cut(s) | 1326 |
| Psp6I | CCWGG | 8 cut(s) | 191, 972, 1582, 1623, 1870, 2320, 2779, 2818 |
| PspGI | CCWGG | 8 cut(s) | 191, 972, 1582, 1623, 1870, 2320, 2779, 2818 |
| PspN4I | GGNNCC | 3 cut(s) | 462, 1005, 2319 |
| PspPI | GGNCC | 4 cut(s) | 771, 788, 797, 2861 |
| PstI | CTGCAG | 1 cut(s) | 203 |
| PstNI | CAGNNNCTG | 4 cut(s) | 198, 254, 1694, 2645 |
| PsuI | RGATCY | 1 cut(s) | 2749 |
| PvuII | CAGCTG | 3 cut(s) | 653, 2494, 2759 |
| RseI | CAYNNNNRTG | 2 cut(s) | 201, 1131 |
| SaqAI | TTAA | 7 cut(s) | 438, 941, 1326, 1370, 1644, 2067, 2193 |
| Sau3AI | GATC | 6 cut(s) | 853, 1090, 1123, 1849, 2749, 2966 |
| Sau96I | GGNCC | 4 cut(s) | 771, 788, 797, 2861 |
| ScaI | AGTACT | 1 cut(s) | 2673 |
| SchI | GAGTC | 3 cut(s) | 2004, 2344, 2427 |
| ScrFI | CCNGG | 8 cut(s) | 193, 974, 1584, 1625, 1872, 2322, 2781, 2820 |
| SduI | GDGCHC | 4 cut(s) | 58, 1319, 1952, 2774 |
| SfcI | CTRYAG | 6 cut(s) | 109, 199, 633, 1554, 2268, 2865 |
| SinI | GGWCC | 3 cut(s) | 771, 788, 797 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 201, 1131 |
| SmlI | CTYRAG | 2 cut(s) | 2066, 2094 |
| SmoI | CTYRAG | 2 cut(s) | 2066, 2094 |
| SnaBI | TACGTA | 1 cut(s) | 506 |
| SpeI | ACTAGT | 2 cut(s) | 277, 2674 |
| SsiI | CCGC | 7 cut(s) | 48, 72, 777, 1053, 1085, 2807, 2895 |
| SspI | AATATT | 1 cut(s) | 1177 |
| SspMI | CTAG | 6 cut(s) | 237, 278, 1082, 1970, 2586, 2675 |
| StyD4I | CCNGG | 8 cut(s) | 191, 972, 1582, 1623, 1870, 2320, 2779, 2818 |
| StyI | CCWWGG | 4 cut(s) | 43, 294, 1653, 2634 |
| TaaI | ACNGT | 6 cut(s) | 160, 261, 406, 634, 2123, 2165 |
| TaiI | ACGT | 6 cut(s) | 118, 358, 508, 1564, 2308, 2380 |
| TaqI | TCGA | 6 cut(s) | 77, 331, 532, 988, 1533, 2965 |
| TatI | WGTACW | 5 cut(s) | 242, 256, 1393, 1912, 2671 |
| TauI | GCSGC | 1 cut(s) | 2810 |
| TfiI | GAWTC | 7 cut(s) | 317, 990, 1105, 1829, 2681, 2705, 2938 |
| Tru1I | TTAA | 7 cut(s) | 438, 941, 1326, 1370, 1644, 2067, 2193 |
| Tru9I | TTAA | 7 cut(s) | 438, 941, 1326, 1370, 1644, 2067, 2193 |
| TspDTI | ATGAA | 6 cut(s) | 288, 705, 1032, 1725, 2501, 2592 |
| Vha464I | CTTAAG | 1 cut(s) | 2066 |
| VpaK11BI | GGWCC | 3 cut(s) | 771, 788, 797 |
| VspI | ATTAAT | 1 cut(s) | 1326 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 998 |
| XapI | RAATTY | 4 cut(s) | 905, 1388, 1418, 1697 |
| XbaI | TCTAGA | 1 cut(s) | 1969 |
| XmiI | GTMKAC | 2 cut(s) | 108, 2541 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1419 |
| XspI | CTAG | 6 cut(s) | 237, 278, 1082, 1970, 2586, 2675 |
| ZraI | GACGTC | 1 cut(s) | 116 |
| ZrmI | AGTACT | 1 cut(s) | 2673 |
| Zsp2I | ATGCAT | 1 cut(s) | 1501 |