FvH4_2g21020

Glutathione gamma-glutamylcysteinyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
17511115 .. 17514098
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g21020.t1

Sequence Viewer

Length: 1386 bp
ATGGAAGGGTTCTTCAAGCTCATCTCCTACTACCAGACCCAATCTGAGCCTGCCTATTGCGGCTTGGCCACTCTCGCCGTGGTTCTCAATGCGCTTGCTATTGATCCTGGCAGGAAATGGAAAGGGCCGTGGAGATGGTTTGATGACTCGATGCTTGATTGCTGTGAGCCTTTGGCCAAGATCAAAGCTGAAGGCATTACATTTGGGAAAGTTGCGTGCTTGGCGCATTGCAATGGAGCTGAAGTGGAAGCTTTTCGGACACATGAGAGCTCCGTTGATGATTTTCGCAAGCGTGTGATTTCGTGTACTTCTTCCGAGGATTGTCATGTCATCACTTCATACCACAGAGGTGTCTTTAAGCAGACTGGAACTGGTCATTTTTCACCAGTCGGGGGCTATCATGCTGCAAAAGATATGGTTCTCATTTTGGATGTTGCTCGATTCAAATATCCTCCCCATTGGGTTCCTCTTTCACTTCTTTGGGAGGCGATGGATACTGTTGATGGAGCAACTGGACATCGTCGGGGGTACATGATTATTTCAAGGCTTAACAGAACACCATCGATCCTATACACTGTGAGTTGTAGACATGAAGGTTGGAACAGTGTTGCGAAGTACTTGATAGAAGATGTTCCTCTACGTATGAAGTTAGAAGAAATAAAAGATGTTCAGGAAGTAATCTCTGTTGTATTCAAATTACCACCTGCCGACTTGAGAGAGTTCGTCAAATGGGTTGCTGAAGTTCGGAGACAAGAGGATGGGCATTTGATCTTAAGCAAAGAGGAGAAAGGAAGGCTAGCCATTAAGGAAGAAGTATTGAAACAAGTAAGGGAGACAGAACTCTACAAACATGTAACCAGATGGTTGGCTTCTGAAAGTGCACTTTGTAAAGAAACCACACCACCAATTGGTAAAGATTTGTTGCCTGAGATTGGTGCAAAGGTCTGCTGCCAAGGAGCAGAAATTTTGGGTGGGAAAGTTTGTTCATCAAATGGAACGTGCTGTACGCCAACTGATGTTAAACTCTTGAAGTCCAATGGTGATAATTCTGTAACAGTGGTGTCAGGAATTGTAACAACTGATGGCAATGAACAAGGAGTTGATTTGCTGGTTCCCTCTTGTAAAACAGATCCTACTAGCTTGTGTTATTTCTATCAAGGTGGCTGCATAGGGATGCATCCATCTACAGGTGATGTTCTCACAGTACTTCTATTGGCGCTGCCTCCACTCATATGGTCAGGCATTAAAGAAGCAAAGCTACTGGAGGATATTAATGGTCTTGTATCAACTGATTGTCTTACCTTCTTTGCTTCAAGGGGAGGTTCTGTTCTTGCGAGGCAAATTCACTTTCTCATGACAGATAGTGGAGCATCTTCTCACTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

462

Amino Acids

50.83

Weight (kDa)

6.29

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phytochelatin PF05023 1 - 177 3.6e-81 Phytochelatin synthase
Phytochelatin_C PF09328 195 - 433 5.1e-102 Domain of unknown function (DUF1984)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 712
Acc36I ACCTGC 1 cut(s) 712
AccB7I CCANNNNNTGG 1 cut(s) 908
AccI GTMKAC 1 cut(s) 586
AciI CCGC 1 cut(s) 60
AclWI GGATC 3 cut(s) 98, 559, 1124
AcoI YGGCCR 2 cut(s) 66, 174
AcsI RAATTY 2 cut(s) 963, 1341
AcuI CTGAAG 3 cut(s) 210, 261, 759
AfaI GTAC 5 cut(s) 307, 530, 617, 1006, 1206
AfiI CCNNNNNNNGG 4 cut(s) 392, 908, 932, 1187
AflII CTTAAG 1 cut(s) 772
AflIII ACRYGT 1 cut(s) 850
AgsI TTSAA 7 cut(s) 16, 445, 543, 694, 820, 1030, 1314
AjnI CCWGG 1 cut(s) 106
AleI CACNNNNGTG 1 cut(s) 348
AloI GAACNNNNNNTCC 4 cut(s) 967, 999, 1311, 1343
AluBI AGCT 7 cut(s) 19, 188, 239, 251, 270, 1140, 1258
AluI AGCT 7 cut(s) 19, 188, 239, 251, 270, 1140, 1258
Alw21I GWGCWC 2 cut(s) 272, 883
Alw26I GTCTC 2 cut(s) 742, 827
Alw44I GTGCAC 1 cut(s) 879
AlwI GGATC 3 cut(s) 98, 559, 1124
AoxI GGCC 3 cut(s) 66, 125, 174
ApaLI GTGCAC 1 cut(s) 879
ApeKI GCWGC 4 cut(s) 404, 948, 1164, 1219
ApoI RAATTY 2 cut(s) 963, 1341
AseI ATTAAT 1 cut(s) 1272
Asp700I GAANNNNTTC 2 cut(s) 252, 630
AspLEI GCGC 3 cut(s) 94, 226, 1219
AspS9I GGNCC 1 cut(s) 125
AsuHPI GGTGA 3 cut(s) 375, 1052, 1202
AsuNHI GCTAGC 1 cut(s) 796
BaeGI GKGCMC 1 cut(s) 883
BalI TGGCCA 2 cut(s) 68, 176
BanII GRGCYC 1 cut(s) 272
BarI GAAGNNNNNNTAC 2 cut(s) 1242, 1274
Bbv12I GWGCWC 2 cut(s) 272, 883
BbvI GCAGC 4 cut(s) 391, 935, 1151, 1206
BccI CCATC 8 cut(s) 129, 484, 497, 568, 752, 855, 1076, 1189
BceAI ACGGC 2 cut(s) 62, 112
BciT130I CCWGG 1 cut(s) 108
BciVI GTATCC 1 cut(s) 487
BcoDI GTCTC 2 cut(s) 742, 827
BfaI CTAG 2 cut(s) 797, 1137
BfmI CTRYAG 1 cut(s) 1185
BfoI RGCGCY 1 cut(s) 1220
BfrI CTTAAG 1 cut(s) 772
BfuAI ACCTGC 1 cut(s) 712
BfuI GTATCC 1 cut(s) 487
BisI GCNGC 5 cut(s) 61, 405, 949, 1165, 1220
BlsI GCNGC 5 cut(s) 62, 406, 950, 1166, 1221
BmcAI AGTACT 2 cut(s) 617, 1206
Bme1390I CCNGG 1 cut(s) 108
BmgT120I GGNCC 1 cut(s) 125
BmiI GGNNCC 2 cut(s) 465, 1113
BmrFI CCNGG 1 cut(s) 108
BmsI GCATC 4 cut(s) 141, 1164, 1186, 1379
BmtI GCTAGC 1 cut(s) 800
BpmI CTGGAG 1 cut(s) 1283
BpuEI CTTGAG 1 cut(s) 733
Bsa29I ATCGAT 1 cut(s) 563
BsaAI YACGTR 1 cut(s) 641
BsaJI CCNNGG 4 cut(s) 78, 128, 315, 952
BsaXI ACNNNNNCTCC 4 cut(s) 228, 258, 1311, 1341
Bsc4I CCNNNNNNNGG 4 cut(s) 392, 908, 932, 1187
Bse1I ACTGG 5 cut(s) 370, 376, 386, 517, 1266
Bse3DI GCAATG 3 cut(s) 226, 238, 1093
BseBI CCWGG 1 cut(s) 108
BseCI ATCGAT 1 cut(s) 563
BseDI CCNNGG 4 cut(s) 78, 128, 315, 952
BseGI GGATG 4 cut(s) 436, 763, 1177, 1179
BseLI CCNNNNNNNGG 4 cut(s) 392, 908, 932, 1187
BseMI GCAATG 3 cut(s) 226, 238, 1093
BseMII CTCAG 2 cut(s) 36, 918
BseNI ACTGG 5 cut(s) 370, 376, 386, 517, 1266
BseRI GAGGAG 1 cut(s) 797
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 4 cut(s) 391, 935, 1151, 1206
BshFI GGCC 3 cut(s) 68, 127, 176
BshVI ATCGAT 1 cut(s) 563
BsiHKAI GWGCWC 2 cut(s) 272, 883
BslI CCNNNNNNNGG 4 cut(s) 392, 908, 932, 1187
BsmAI GTCTC 2 cut(s) 742, 827
BsnI GGCC 3 cut(s) 68, 127, 176
Bsp1286I GDGCHC 2 cut(s) 272, 883
Bsp143I GATC 5 cut(s) 103, 180, 564, 768, 1129
BspACI CCGC 1 cut(s) 60
BspANI GGCC 3 cut(s) 68, 127, 176
BspCNI CTCAG 2 cut(s) 37, 919
BspDI ATCGAT 1 cut(s) 563
BspHI TCATGA 1 cut(s) 1353
BspLI GGNNCC 2 cut(s) 465, 1113
BspMI ACCTGC 1 cut(s) 712
BspOI GCTAGC 1 cut(s) 800
BspPI GGATC 3 cut(s) 98, 559, 1124
BspTI CTTAAG 1 cut(s) 772
BsrDI GCAATG 3 cut(s) 226, 238, 1093
BsrI ACTGG 5 cut(s) 370, 376, 386, 517, 1266
BssECI CCNNGG 4 cut(s) 78, 128, 315, 952
BssMI GATC 5 cut(s) 103, 180, 564, 768, 1129
BssT1I CCWWGG 1 cut(s) 952
Bst2UI CCWGG 1 cut(s) 108
Bst4CI ACNGT 5 cut(s) 499, 577, 605, 1057, 1204
BstAFI CTTAAG 1 cut(s) 772
BstBAI YACGTR 1 cut(s) 641
BstC8I GCNNGC 5 cut(s) 51, 96, 217, 290, 798
BstDEI CTNAG 2 cut(s) 45, 927
BstDSI CCRYGG 2 cut(s) 78, 128
BstF5I GGATG 4 cut(s) 436, 763, 1177, 1179
BstH2I RGCGCY 1 cut(s) 1220
BstHHI GCGC 3 cut(s) 94, 226, 1219
BstKTI GATC 5 cut(s) 106, 183, 567, 771, 1132
BstMAI GTCTC 2 cut(s) 742, 827
BstMBI GATC 5 cut(s) 103, 180, 564, 768, 1129
BstMWI GCNNNNNNNGC 2 cut(s) 74, 221
BstNI CCWGG 1 cut(s) 108
BstNSI RCATGY 1 cut(s) 854
BstSCI CCNGG 1 cut(s) 106
BstSFI CTRYAG 1 cut(s) 1185
BstSLI GKGCMC 1 cut(s) 883
BstSNI TACGTA 1 cut(s) 641
BstV1I GCAGC 4 cut(s) 391, 935, 1151, 1206
BstX2I RGATCY 1 cut(s) 1129
BstXI CCANNNNNNTGG 2 cut(s) 865, 1233
BstYI RGATCY 1 cut(s) 1129
Bsu15I ATCGAT 1 cut(s) 563
BsuI GTATCC 1 cut(s) 487
BsuRI GGCC 3 cut(s) 68, 127, 176
BsuTUI ATCGAT 1 cut(s) 563
BtgI CCRYGG 2 cut(s) 78, 128
BtgZI GCGATG 1 cut(s) 503
BtsCI GGATG 4 cut(s) 436, 763, 1177, 1179
BtsIMutI CAGTG 3 cut(s) 573, 610, 1062
BveI ACCTGC 1 cut(s) 712
Cac8I GCNNGC 5 cut(s) 51, 96, 217, 290, 798
CciI TCATGA 1 cut(s) 1353
CfoI GCGC 3 cut(s) 94, 226, 1219
Cfr13I GGNCC 1 cut(s) 125
ClaI ATCGAT 1 cut(s) 563
Csp6I GTAC 5 cut(s) 306, 529, 616, 1005, 1205
CviAII CATG 7 cut(s) 263, 326, 401, 532, 590, 851, 1354
CviQI GTAC 5 cut(s) 306, 529, 616, 1005, 1205
DdeI CTNAG 2 cut(s) 45, 927
DpnI GATC 5 cut(s) 105, 182, 566, 770, 1131
DpnII GATC 5 cut(s) 103, 180, 564, 768, 1129
EaeI YGGCCR 2 cut(s) 66, 174
Ecl136II GAGCTC 1 cut(s) 270
Eco105I TACGTA 1 cut(s) 641
Eco130I CCWWGG 1 cut(s) 952
Eco24I GRGCYC 1 cut(s) 272
Eco53kI GAGCTC 1 cut(s) 270
Eco57I CTGAAG 3 cut(s) 210, 261, 759
EcoICRI GAGCTC 1 cut(s) 270
EcoRII CCWGG 1 cut(s) 106
EcoT14I CCWWGG 1 cut(s) 952
EcoT22I ATGCAT 1 cut(s) 1179
EcoT38I GRGCYC 1 cut(s) 272
ErhI CCWWGG 1 cut(s) 952
FaeI CATG 7 cut(s) 266, 329, 404, 535, 593, 854, 1357
FatI CATG 7 cut(s) 262, 325, 400, 531, 589, 850, 1353
FauNDI CATATG 1 cut(s) 1232
FblI GTMKAC 1 cut(s) 586
Fnu4HI GCNGC 5 cut(s) 61, 405, 949, 1165, 1220
FokI GGATG 4 cut(s) 443, 770, 1164, 1186
FriOI GRGCYC 1 cut(s) 272
Fsp4HI GCNGC 5 cut(s) 61, 405, 949, 1165, 1220
FspBI CTAG 2 cut(s) 797, 1137
GlaI GCGC 3 cut(s) 93, 225, 1218
GluI GCNGC 5 cut(s) 61, 405, 949, 1165, 1220
GsuI CTGGAG 1 cut(s) 1283
HaeII RGCGCY 1 cut(s) 1220
HaeIII GGCC 3 cut(s) 68, 127, 176
HhaI GCGC 3 cut(s) 94, 226, 1219
Hin1II CATG 7 cut(s) 266, 329, 404, 535, 593, 854, 1357
Hin6I GCGC 3 cut(s) 92, 224, 1217
HinP1I GCGC 3 cut(s) 92, 224, 1217
HindIII AAGCTT 1 cut(s) 249
HinfI GANTC 2 cut(s) 146, 441
HphI GGTGA 3 cut(s) 375, 1052, 1202
Hpy166II GTNNAC 3 cut(s) 306, 587, 881
Hpy188I TCNGA 5 cut(s) 46, 258, 316, 747, 874
Hpy188III TCNNGA 4 cut(s) 671, 1027, 1065, 1354
Hpy8I GTNNAC 3 cut(s) 306, 587, 881
Hpy99I CGWCG 1 cut(s) 525
HpyAV CCTTC 4 cut(s) 185, 587, 786, 1312
HpyCH4III ACNGT 5 cut(s) 499, 577, 605, 1057, 1204
HpyCH4IV ACGT 2 cut(s) 640, 998
HpyCH4V TGCA 6 cut(s) 231, 407, 881, 938, 1167, 1177
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 221
HpyF3I CTNAG 2 cut(s) 45, 927
HpySE526I ACGT 2 cut(s) 640, 998
Hsp92II CATG 7 cut(s) 266, 329, 404, 535, 593, 854, 1357
HspAI GCGC 3 cut(s) 92, 224, 1217
Kzo9I GATC 5 cut(s) 103, 180, 564, 768, 1129
LmnI GCTCC 5 cut(s) 236, 275, 506, 956, 1367
Lsp1109I GCAGC 4 cut(s) 391, 935, 1151, 1206
LweI GCATC 4 cut(s) 141, 1164, 1186, 1379
MaeI CTAG 2 cut(s) 797, 1137
MaeII ACGT 2 cut(s) 640, 998
MaeIII GTNAC 3 cut(s) 853, 1051, 1072
MalI GATC 5 cut(s) 105, 182, 566, 770, 1131
MboI GATC 5 cut(s) 103, 180, 564, 768, 1129
MboII GAAGA 6 cut(s) 4, 303, 638, 665, 821, 1365
MfeI CAATTG 1 cut(s) 906
MflI RGATCY 1 cut(s) 1129
MhlI GDGCHC 2 cut(s) 272, 883
MlsI TGGCCA 2 cut(s) 68, 176
MluCI AATT 6 cut(s) 695, 906, 963, 1045, 1068, 1341
MluNI TGGCCA 2 cut(s) 68, 176
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 1 cut(s) 578
Mox20I TGGCCA 2 cut(s) 68, 176
Mph1103I ATGCAT 1 cut(s) 1179
MroXI GAANNNNTTC 2 cut(s) 252, 630
MscI TGGCCA 2 cut(s) 68, 176
MseI TTAA 7 cut(s) 357, 549, 773, 804, 1020, 1245, 1272
MslI CAYNNNNRTG 4 cut(s) 231, 348, 1172, 1231
Msp20I TGGCCA 2 cut(s) 68, 176
MspCI CTTAAG 1 cut(s) 772
MspR9I CCNGG 1 cut(s) 108
MunI CAATTG 1 cut(s) 906
MvaI CCWGG 1 cut(s) 108
MwoI GCNNNNNNNGC 2 cut(s) 74, 221
NdeI CATATG 1 cut(s) 1232
NdeII GATC 5 cut(s) 103, 180, 564, 768, 1129
NheI GCTAGC 1 cut(s) 796
NlaIII CATG 7 cut(s) 266, 329, 404, 535, 593, 854, 1357
NlaIV GGNNCC 2 cut(s) 465, 1113
NsiI ATGCAT 1 cut(s) 1179
NspI RCATGY 1 cut(s) 854
OliI CACNNNNGTG 1 cut(s) 348
PagI TCATGA 1 cut(s) 1353
PaqCI CACCTGC 1 cut(s) 712
PciI ACATGT 1 cut(s) 850
PdmI GAANNNNTTC 2 cut(s) 252, 630
PfeI GAWTC 1 cut(s) 441
PflFI GACNNNGTC 1 cut(s) 519
PflMI CCANNNNNTGG 1 cut(s) 908
PkrI GCNGC 5 cut(s) 62, 406, 950, 1166, 1221
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
Ppu21I YACGTR 1 cut(s) 641
PscI ACATGT 1 cut(s) 850
PshBI ATTAAT 1 cut(s) 1272
Psp124BI GAGCTC 1 cut(s) 272
Psp6I CCWGG 1 cut(s) 106
PspGI CCWGG 1 cut(s) 106
PspN4I GGNNCC 2 cut(s) 465, 1113
PspPI GGNCC 1 cut(s) 125
PsrI GAACNNNNNNTAC 2 cut(s) 988, 1020
PsuI RGATCY 1 cut(s) 1129
PsyI GACNNNGTC 1 cut(s) 519
RsaI GTAC 5 cut(s) 307, 530, 617, 1006, 1206
RsaNI GTAC 5 cut(s) 306, 529, 616, 1005, 1205
RseI CAYNNNNRTG 4 cut(s) 231, 348, 1172, 1231
SacI GAGCTC 1 cut(s) 272
SaqAI TTAA 7 cut(s) 357, 549, 773, 804, 1020, 1245, 1272
SatI GCNGC 5 cut(s) 61, 405, 949, 1165, 1220
Sau3AI GATC 5 cut(s) 103, 180, 564, 768, 1129
Sau96I GGNCC 1 cut(s) 125
ScaI AGTACT 2 cut(s) 617, 1206
SchI GAGTC 1 cut(s) 140
ScrFI CCNGG 1 cut(s) 108
SduI GDGCHC 2 cut(s) 272, 883
SfaNI GCATC 4 cut(s) 141, 1164, 1186, 1379
SfcI CTRYAG 1 cut(s) 1185
SmiMI CAYNNNNRTG 4 cut(s) 231, 348, 1172, 1231
SmlI CTYRAG 2 cut(s) 712, 772
SmoI CTYRAG 2 cut(s) 712, 772
SnaBI TACGTA 1 cut(s) 641
Sse9I AATT 6 cut(s) 695, 906, 963, 1045, 1068, 1341
SsiI CCGC 1 cut(s) 60
SspMI CTAG 2 cut(s) 797, 1137
SstI GAGCTC 1 cut(s) 272
StyD4I CCNGG 1 cut(s) 106
StyI CCWWGG 1 cut(s) 952
TaaI ACNGT 5 cut(s) 499, 577, 605, 1057, 1204
TaiI ACGT 2 cut(s) 643, 1001
TaqI TCGA 3 cut(s) 149, 439, 563
TasI AATT 6 cut(s) 695, 906, 963, 1045, 1068, 1341
TatI WGTACW 3 cut(s) 305, 615, 1204
TauI GCSGC 1 cut(s) 63
TfiI GAWTC 1 cut(s) 441
Tru1I TTAA 7 cut(s) 357, 549, 773, 804, 1020, 1245, 1272
Tru9I TTAA 7 cut(s) 357, 549, 773, 804, 1020, 1245, 1272
TscAI CASTG 3 cut(s) 580, 610, 1062
TseI GCWGC 4 cut(s) 404, 948, 1164, 1219
TspDTI ATGAA 5 cut(s) 327, 606, 659, 975, 1104
TspGWI ACGGA 1 cut(s) 262
TspRI CASTG 3 cut(s) 580, 610, 1062
Tth111I GACNNNGTC 1 cut(s) 519
Van91I CCANNNNNTGG 1 cut(s) 908
Vha464I CTTAAG 1 cut(s) 772
VneI GTGCAC 1 cut(s) 879
VspI ATTAAT 1 cut(s) 1272
XapI RAATTY 2 cut(s) 963, 1341
XceI RCATGY 1 cut(s) 854
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XmiI GTMKAC 1 cut(s) 586
XmnI GAANNNNTTC 2 cut(s) 252, 630
XspI CTAG 2 cut(s) 797, 1137
ZrmI AGTACT 2 cut(s) 617, 1206
Zsp2I ATGCAT 1 cut(s) 1179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.