FvH4_2g29930

Monooxygenase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
23187431 .. 23190108
2678 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29930.t2

Sequence Viewer

Length: 1224 bp
ATGGGTTCTTGCAAAGACCCGAAACCTAATTGTGAGTTCGTCGAAGGGCCTATAATCGTAGGTGCAGGACCATCTGGTCTCGCAGTAGCTGCTTGCTTATCCAACCATGGCGTCCCTTCTCTGATTCTTGAGAAAAGCAACTGCATAGCTTCTCTATGGCAGCACAAGACTTACGACCGACTCAAACTTCATCTACCTAAACAGTTTTGCCAGCTTCCTCTAATGGGGTTCCCTGAAGACTTCCCAAAATACCCAACAAAGCAACAGTTCATTAACTACATGGAGTCCTATGCTTCCCACTTCTCAATCAAGCCGAGCTTCAACCAGGCCGTCCAAAACGCTGCGTTTGATTCGGCTTCGGGGCATTGGAGGGTTCAGACCCAAGATTTTGAGTACATTTCCCGGTGGCTTATTGTGGCCACCGGAGAAAATGCCGAGCCGGTGATTCCCGATATTCATGGGATTGACAAGTTTAAAGGTCTAATTCGTCATACCAGTTTGTACAAAACTGGCAAAGATTTCAGAAATCAAAGGGTTTTGGTTATTGGGTGTGGGAATTCTGGTATGGAAGTCAGCTTAGACCTTTGCAGAAACAATGCAACCCCTCATATGGTTGTTAGGAACACTGTTCATGTTCTACCAAGGGAGATGTTTGGCTTCTCAACCTTTCAGATAGCAATGACACTTCTTAAATGGATTCCGGTAAAACTCGTGGACCGGATCCTTCTTCTGGTAGCTAGTTTGACTCTCGGCAACACAGATCAATTGGGCCTCCGCCGGCCTAAGACCGGTCCAATCGAGCTCAAAGCCGCCACCGGAAAGACCCCGGTGCTTGATGTTGGAGCATTGTCACTAATAAAATCCGGCAAAATAAAGGTGGTGGAAAATGTGAAGGAGATAACAATCAATGGAGCCAAATTTATGAATGGACAAGAAAAGGAGTTTGATTCTATAATCCTGGCAACTGGATACAAGAGCAATGTTCCTACTTGGCTCAAGGGTTGTGATTTTTTCACCAAAGAAGGAATGCCCCGAGCCCCTTGTCCTAGCTGTTGGAAAGGAAGTGATGGACTTTACACGGTCGGCTTCTCCAGAAAAGGCCTCTCCGGAACGGCATACGACGCCGTCGAGATAGCAAAAGACATTGCTGACCACTGGAAGACAAGCAAAGACTGCAAGGGTAGTGTTGCTTCTTGTGATTCTCATGTCATCCTACTCAAATGA

Protein Analysis

408

Amino Acids

44.87

Weight (kDa)

9.01

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_3 PF13738 18 - 209 3.8e-29 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 18 - 205 2.8e-10 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 19 - 330 2e-29 Flavin-binding monooxygenase-like
Lys_Orn_oxgnase PF13434 83 - 201 2.6e-12 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011898)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 75
AccIII TCCGGA 1 cut(s) 1106
AciI CCGC 2 cut(s) 775, 810
AclWI GGATC 2 cut(s) 715, 728
AcoI YGGCCR 1 cut(s) 417
AcsI RAATTY 2 cut(s) 556, 917
AcuI CTGAAG 1 cut(s) 255
AcyI GRCGYC 2 cut(s) 111, 1122
AfaI GTAC 2 cut(s) 395, 503
AfiI CCNNNNNNNGG 4 cut(s) 224, 610, 730, 788
AgeI ACCGGT 1 cut(s) 788
AgsI TTSAA 1 cut(s) 322
AjnI CCWGG 2 cut(s) 324, 957
AluBI AGCT 8 cut(s) 89, 149, 214, 318, 576, 737, 802, 1050
AluI AGCT 8 cut(s) 89, 149, 214, 318, 576, 737, 802, 1050
Alw21I GWGCWC 1 cut(s) 804
Alw26I GTCTC 1 cut(s) 83
AlwI GGATC 2 cut(s) 715, 728
AlwNI CAGNNNCTG 1 cut(s) 89
Ama87I CYCGRG 1 cut(s) 1032
Aor13HI TCCGGA 1 cut(s) 1106
AoxI GGCC 6 cut(s) 47, 327, 417, 769, 779, 1099
ApeKI GCWGC 3 cut(s) 89, 160, 341
ApoI RAATTY 2 cut(s) 556, 917
AsiGI ACCGGT 1 cut(s) 788
AspS9I GGNCC 5 cut(s) 47, 68, 715, 769, 791
AsuC2I CCSGG 2 cut(s) 403, 827
AsuHPI GGTGA 2 cut(s) 454, 1006
AvaI CYCGRG 1 cut(s) 1032
AvaII GGWCC 3 cut(s) 68, 715, 791
BalI TGGCCA 1 cut(s) 419
BamHI GGATCC 1 cut(s) 720
BanII GRGCYC 2 cut(s) 804, 1039
BarI GAAGNNNNNNTAC 2 cut(s) 1174, 1206
BauI CACGAG 1 cut(s) 710
BbsI GAAGAC 2 cut(s) 243, 1166
Bbv12I GWGCWC 1 cut(s) 804
BbvI GCAGC 3 cut(s) 76, 172, 328
BccI CCATC 2 cut(s) 79, 1061
BceAI ACGGC 3 cut(s) 314, 1109, 1128
BciT130I CCWGG 2 cut(s) 326, 959
BciVI GTATCC 1 cut(s) 962
BcnI CCSGG 2 cut(s) 403, 827
BcoDI GTCTC 1 cut(s) 83
BfaI CTAG 2 cut(s) 738, 1047
BfuI GTATCC 1 cut(s) 962
BisI GCNGC 4 cut(s) 90, 161, 342, 810
BlsI GCNGC 4 cut(s) 91, 162, 343, 811
Bme1390I CCNGG 4 cut(s) 326, 403, 827, 959
Bme18I GGWCC 3 cut(s) 68, 715, 791
BmeT110I CYCGRG 1 cut(s) 1032
BmgT120I GGNCC 5 cut(s) 47, 68, 715, 769, 791
BmiI GGNNCC 3 cut(s) 230, 722, 913
BmrFI CCNGG 4 cut(s) 326, 403, 827, 959
BpiI GAAGAC 2 cut(s) 243, 1166
BpmI CTGGAG 1 cut(s) 1075
BpuEI CTTGAG 2 cut(s) 149, 980
BpuMI CCSGG 2 cut(s) 403, 827
BsaBI GATNNNNATC 1 cut(s) 902
BsaHI GRCGYC 2 cut(s) 111, 1122
BsaI GGTCTC 1 cut(s) 83
BsaJI CCNNGG 3 cut(s) 106, 641, 825
BsaWI WCCGGW 6 cut(s) 422, 700, 717, 788, 815, 1106
Bsc4I CCNNNNNNNGG 4 cut(s) 224, 610, 730, 788
Bse118I RCCGGY 3 cut(s) 439, 777, 788
Bse1I ACTGG 4 cut(s) 495, 514, 970, 1160
Bse3DI GCAATG 3 cut(s) 684, 985, 1143
Bse8I GATNNNNATC 1 cut(s) 902
BseAI TCCGGA 1 cut(s) 1106
BseBI CCWGG 2 cut(s) 326, 959
BseDI CCNNGG 3 cut(s) 106, 641, 825
BseGI GGATG 1 cut(s) 1209
BseJI GATNNNNATC 1 cut(s) 902
BseLI CCNNNNNNNGG 4 cut(s) 224, 610, 730, 788
BseMI GCAATG 3 cut(s) 684, 985, 1143
BseNI ACTGG 4 cut(s) 495, 514, 970, 1160
BseXI GCAGC 3 cut(s) 76, 172, 328
BsgI GTGCAG 1 cut(s) 84
Bsh1285I CGRYCG 2 cut(s) 178, 1083
BshFI GGCC 6 cut(s) 49, 329, 419, 771, 781, 1101
BshTI ACCGGT 1 cut(s) 788
BsiEI CGRYCG 2 cut(s) 178, 1083
BsiHKAI GWGCWC 1 cut(s) 804
BsiHKCI CYCGRG 1 cut(s) 1032
BslFI GGGAC 1 cut(s) 98
BslI CCNNNNNNNGG 4 cut(s) 224, 610, 730, 788
BsmAI GTCTC 1 cut(s) 83
BsmFI GGGAC 1 cut(s) 98
BsmI GAATGC 1 cut(s) 1032
BsnI GGCC 6 cut(s) 49, 329, 419, 771, 781, 1101
Bso31I GGTCTC 1 cut(s) 83
BsoBI CYCGRG 1 cut(s) 1032
Bsp1286I GDGCHC 2 cut(s) 804, 1039
Bsp13I TCCGGA 1 cut(s) 1106
Bsp1407I TGTACA 1 cut(s) 501
Bsp143I GATC 2 cut(s) 720, 760
Bsp19I CCATGG 1 cut(s) 106
BspACI CCGC 2 cut(s) 775, 810
BspANI GGCC 6 cut(s) 49, 329, 419, 771, 781, 1101
BspEI TCCGGA 1 cut(s) 1106
BspLI GGNNCC 3 cut(s) 230, 722, 913
BspPI GGATC 2 cut(s) 715, 728
BspTNI GGTCTC 1 cut(s) 83
BsrDI GCAATG 3 cut(s) 684, 985, 1143
BsrFI RCCGGY 3 cut(s) 439, 777, 788
BsrGI TGTACA 1 cut(s) 501
BsrI ACTGG 4 cut(s) 495, 514, 970, 1160
BssAI RCCGGY 3 cut(s) 439, 777, 788
BssECI CCNNGG 3 cut(s) 106, 641, 825
BssMI GATC 2 cut(s) 720, 760
BssNI GRCGYC 2 cut(s) 111, 1122
BssSI CACGAG 1 cut(s) 710
BssT1I CCWWGG 2 cut(s) 106, 641
Bst2BI CACGAG 1 cut(s) 710
Bst2UI CCWGG 2 cut(s) 326, 959
Bst4CI ACNGT 4 cut(s) 204, 267, 628, 1081
BstACI GRCGYC 2 cut(s) 111, 1122
BstAPI GCANNNNNTGC 2 cut(s) 89, 1173
BstAUI TGTACA 1 cut(s) 501
BstC8I GCNNGC 3 cut(s) 94, 212, 779
BstDEI CTNAG 2 cut(s) 577, 783
BstDSI CCRYGG 1 cut(s) 106
BstF5I GGATG 1 cut(s) 1209
BstKTI GATC 2 cut(s) 723, 763
BstMAI GTCTC 1 cut(s) 83
BstMBI GATC 2 cut(s) 720, 760
BstMCI CGRYCG 2 cut(s) 178, 1083
BstMWI GCNNNNNNNGC 3 cut(s) 89, 1121, 1173
BstNI CCWGG 2 cut(s) 326, 959
BstSCI CCNGG 4 cut(s) 324, 401, 825, 957
BstV1I GCAGC 3 cut(s) 76, 172, 328
BstV2I GAAGAC 2 cut(s) 243, 1166
BstX2I RGATCY 1 cut(s) 720
BstYI RGATCY 1 cut(s) 720
BsuI GTATCC 1 cut(s) 962
BsuRI GGCC 6 cut(s) 49, 329, 419, 771, 781, 1101
BtgI CCRYGG 1 cut(s) 106
BtsCI GGATG 1 cut(s) 1209
BtsIMutI CAGTG 2 cut(s) 624, 1153
Cac8I GCNNGC 3 cut(s) 94, 212, 779
CaiI CAGNNNCTG 1 cut(s) 89
Cfr10I RCCGGY 3 cut(s) 439, 777, 788
Cfr13I GGNCC 5 cut(s) 47, 68, 715, 769, 791
CseI GACGC 2 cut(s) 100, 1130
Csp6I GTAC 2 cut(s) 394, 502
CspAI ACCGGT 1 cut(s) 788
CviAII CATG 5 cut(s) 107, 280, 458, 632, 1205
CviQI GTAC 2 cut(s) 394, 502
DdeI CTNAG 2 cut(s) 577, 783
DpnI GATC 2 cut(s) 722, 762
DpnII GATC 2 cut(s) 720, 760
DraI TTTAAA 1 cut(s) 475
DrdI GACNNNNNNGTC 1 cut(s) 75
DseDI GACNNNNNNGTC 1 cut(s) 75
EaeI YGGCCR 1 cut(s) 417
EciI GGCGGA 1 cut(s) 764
Ecl136II GAGCTC 1 cut(s) 802
Eco130I CCWWGG 2 cut(s) 106, 641
Eco147I AGGCCT 1 cut(s) 1101
Eco24I GRGCYC 2 cut(s) 804, 1039
Eco31I GGTCTC 1 cut(s) 83
Eco47I GGWCC 3 cut(s) 68, 715, 791
Eco53kI GAGCTC 1 cut(s) 802
Eco57I CTGAAG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 1032
EcoICRI GAGCTC 1 cut(s) 802
EcoO109I RGGNCCY 1 cut(s) 47
EcoRI GAATTC 1 cut(s) 556
EcoRII CCWGG 2 cut(s) 324, 957
EcoT14I CCWWGG 2 cut(s) 106, 641
EcoT38I GRGCYC 2 cut(s) 804, 1039
ErhI CCWWGG 2 cut(s) 106, 641
FaeI CATG 5 cut(s) 110, 283, 461, 635, 1208
FalI AAGNNNNNCTT 2 cut(s) 302, 334
FaqI GGGAC 1 cut(s) 98
FatI CATG 5 cut(s) 106, 279, 457, 631, 1204
FauNDI CATATG 1 cut(s) 609
Fnu4HI GCNGC 4 cut(s) 90, 161, 342, 810
FokI GGATG 1 cut(s) 1196
FriOI GRGCYC 2 cut(s) 804, 1039
Fsp4HI GCNGC 4 cut(s) 90, 161, 342, 810
FspBI CTAG 2 cut(s) 738, 1047
GluI GCNGC 4 cut(s) 90, 161, 342, 810
GsuI CTGGAG 1 cut(s) 1075
HaeIII GGCC 6 cut(s) 49, 329, 419, 771, 781, 1101
HgaI GACGC 2 cut(s) 100, 1130
Hin1I GRCGYC 2 cut(s) 111, 1122
Hin1II CATG 5 cut(s) 110, 283, 461, 635, 1208
HinfI GANTC 9 cut(s) 124, 180, 284, 350, 445, 697, 745, 947, 1199
HphI GGTGA 2 cut(s) 454, 1006
Hpy166II GTNNAC 1 cut(s) 715
Hpy188I TCNGA 4 cut(s) 123, 378, 524, 672
Hpy188III TCNNGA 5 cut(s) 128, 449, 1092, 1107, 1129
Hpy8I GTNNAC 1 cut(s) 715
Hpy99I CGWCG 3 cut(s) 44, 1124, 1130
HpyAV CCTTC 5 cut(s) 38, 126, 734, 886, 1016
HpyCH4III ACNGT 4 cut(s) 204, 267, 628, 1081
HpyCH4V TGCA 6 cut(s) 12, 65, 144, 588, 599, 1176
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 1121, 1173
HpyF3I CTNAG 2 cut(s) 577, 783
Hsp92I GRCGYC 2 cut(s) 111, 1122
Hsp92II CATG 5 cut(s) 110, 283, 461, 635, 1208
Kpn2I TCCGGA 1 cut(s) 1106
KroI GCCGGC 1 cut(s) 777
KroNI GCCGGC 1 cut(s) 779
Kzo9I GATC 2 cut(s) 720, 760
LmnI GCTCC 2 cut(s) 842, 911
Lsp1109I GCAGC 3 cut(s) 76, 172, 328
MaeI CTAG 2 cut(s) 738, 1047
MaeIII GTNAC 1 cut(s) 849
MalI GATC 2 cut(s) 722, 762
MboI GATC 2 cut(s) 720, 760
MboII GAAGA 3 cut(s) 248, 719, 1171
MfeI CAATTG 1 cut(s) 764
MflI RGATCY 1 cut(s) 720
MhlI GDGCHC 2 cut(s) 804, 1039
MlsI TGGCCA 1 cut(s) 419
MluCI AATT 5 cut(s) 28, 483, 556, 764, 917
MluNI TGGCCA 1 cut(s) 419
MlyI GAGTC 3 cut(s) 174, 293, 739
MmeI TCCRAC 3 cut(s) 126, 820, 1034
MnlI CCTC 5 cut(s) 228, 363, 615, 782, 1112
Mox20I TGGCCA 1 cut(s) 419
MroI TCCGGA 1 cut(s) 1106
MroNI GCCGGC 1 cut(s) 777
MscI TGGCCA 1 cut(s) 419
MseI TTAA 3 cut(s) 273, 474, 690
Msp20I TGGCCA 1 cut(s) 419
MspR9I CCNGG 4 cut(s) 326, 403, 827, 959
MunI CAATTG 1 cut(s) 764
Mva1269I GAATGC 1 cut(s) 1032
MvaI CCWGG 2 cut(s) 326, 959
MwoI GCNNNNNNNGC 3 cut(s) 89, 1121, 1173
NaeI GCCGGC 1 cut(s) 779
NciI CCSGG 2 cut(s) 403, 827
NcoI CCATGG 1 cut(s) 106
NdeI CATATG 1 cut(s) 609
NdeII GATC 2 cut(s) 720, 760
NgoMIV GCCGGC 1 cut(s) 777
NlaIII CATG 5 cut(s) 110, 283, 461, 635, 1208
NlaIV GGNNCC 3 cut(s) 230, 722, 913
NmeAIII GCCGAG 3 cut(s) 339, 460, 729
NmuCI GTSAC 1 cut(s) 849
PceI AGGCCT 1 cut(s) 1101
PcsI WCGNNNNNNNCGW 1 cut(s) 1125
PctI GAATGC 1 cut(s) 1032
PdiI GCCGGC 1 cut(s) 779
PfeI GAWTC 6 cut(s) 124, 350, 445, 697, 947, 1199
PflFI GACNNNGTC 1 cut(s) 1124
PinAI ACCGGT 1 cut(s) 788
PkrI GCNGC 4 cut(s) 91, 162, 343, 811
PleI GAGTC 3 cut(s) 174, 292, 739
PpsI GAGTC 3 cut(s) 174, 292, 739
Psp124BI GAGCTC 1 cut(s) 804
Psp6I CCWGG 2 cut(s) 324, 957
PspGI CCWGG 2 cut(s) 324, 957
PspN4I GGNNCC 3 cut(s) 230, 722, 913
PspPI GGNCC 5 cut(s) 47, 68, 715, 769, 791
PstNI CAGNNNCTG 1 cut(s) 89
PsuI RGATCY 1 cut(s) 720
PsyI GACNNNGTC 1 cut(s) 1124
RsaI GTAC 2 cut(s) 395, 503
RsaNI GTAC 2 cut(s) 394, 502
SacI GAGCTC 1 cut(s) 804
SaqAI TTAA 3 cut(s) 273, 474, 690
SatI GCNGC 4 cut(s) 90, 161, 342, 810
Sau3AI GATC 2 cut(s) 720, 760
Sau96I GGNCC 5 cut(s) 47, 68, 715, 769, 791
SchI GAGTC 3 cut(s) 174, 293, 739
ScrFI CCNGG 4 cut(s) 326, 403, 827, 959
SduI GDGCHC 2 cut(s) 804, 1039
SinI GGWCC 3 cut(s) 68, 715, 791
SmlI CTYRAG 2 cut(s) 128, 995
SmoI CTYRAG 2 cut(s) 128, 995
Sse9I AATT 5 cut(s) 28, 483, 556, 764, 917
SseBI AGGCCT 1 cut(s) 1101
SsiI CCGC 2 cut(s) 775, 810
SspMI CTAG 2 cut(s) 738, 1047
SstI GAGCTC 1 cut(s) 804
StuI AGGCCT 1 cut(s) 1101
StyD4I CCNGG 4 cut(s) 324, 401, 825, 957
StyI CCWWGG 2 cut(s) 106, 641
TaaI ACNGT 4 cut(s) 204, 267, 628, 1081
TaqI TCGA 3 cut(s) 42, 798, 1128
TaqII GACCGA 1 cut(s) 192
TasI AATT 5 cut(s) 28, 483, 556, 764, 917
TatI WGTACW 2 cut(s) 393, 501
TauI GCSGC 1 cut(s) 812
TfiI GAWTC 6 cut(s) 124, 350, 445, 697, 947, 1199
Tru1I TTAA 3 cut(s) 273, 474, 690
Tru9I TTAA 3 cut(s) 273, 474, 690
TscAI CASTG 2 cut(s) 631, 1160
TseFI GTSAC 1 cut(s) 849
TseI GCWGC 3 cut(s) 89, 160, 341
Tsp45I GTSAC 1 cut(s) 849
TspDTI ATGAA 5 cut(s) 179, 259, 446, 620, 938
TspRI CASTG 2 cut(s) 631, 1160
Tth111I GACNNNGTC 1 cut(s) 1124
VpaK11BI GGWCC 3 cut(s) 68, 715, 791
XapI RAATTY 2 cut(s) 556, 917
XspI CTAG 2 cut(s) 738, 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.