MD08G1139500.v1.1

Monooxygenase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
13470642 .. 13472655
2014 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1139500.v1.1.491

Sequence Viewer

Length: 1233 bp
ATGGGTTCGTCCAAAAAGCCCCAACAAGAAAACCAAGAATCCAATTCCGGGATTCTTCAAGGCTCTATCATTGTAGGCGCAGGACCATCTGGTCTCGCAGCAGCAGCTTGCCTCTCCAACAATGGCGTTCCTTCTCTGATTCTCGAGAAATCCGACTGCATAGCATCTCTATGGCAGCAGAAAACTTACGACCGTCTCAAACTTCACCTCCCCAAGCAATTCTGCGAGCTTCCTCTCATGGGGTTCCCTGAAGATTTCCCAAGGTACCCTACAAAATCCCAGTTCATTTCATACATGGAGTCCTACGCCTCCTACTTCTCAATCAAACCAAAGTTCAACCAGGCCGTCCAGACCGCAGAATTCAATTCCGTTTCTGGGTTTTGGAGAGTGAAGACTCAGGATTATGAGTACATTTCCAAGTGGCTGATTGTTGCCACAGGAGAGAATGCTGAGCCGGTCGTACCGGAGATTGTTGGGATGGAAAAGTTTCAAGGCCCTGTTCTTCACACCAGCCTGTACAAGTCTGGCTCTGATTTCAGAAACCAAAGGGTTTTGGTTGTTGGGTGTGGAAATTCTGGCATGGAAGTCAGCCTTGACCTCTGTAGATACAATGCCATCCCTCATATGGTTGTTAGAAACACTGTTCATGTTTTGCCAAGAGAGATGTTTGGGTTCTCAACATTTGGGATCGCAATGGCTCTTCTCAAATGCCTGCCATTGAAGCTTGTAGACAGTGTCCTATTGCTTGGGGCAAGTTTCATCCTAGGCAACACAGACCAATTAGGGCTTAAGAGGCCTAAAACTGGCCCAATTGAGCTAAAAAATGTCACTGGTAAAACCCCAGTTCTTGATGTTGGAGCATTGTCACAAATTAAATCTGACAAAATAAAGGTGATGGAAGGGGTGAAGGAGATAACAAGAAATGGAGCAAGATTTATAAATGGACAGGAGAAGGAGTTTGATTCTATAATCTTAGCAACTGGGTACAAAAGCAATGTGCCTACTTGGCTCAAGGGTTGTGACTTTTTCACCAAAGATGGGATGCCAAAAACACCCTTTCCCAACTGCTGGAAAGGAAATGATGGTCTCTACACAGTTGGCTTCACAAGAAGAGGGCTTCTTGGAACGGCTTATGATGCTGTTGCGATAGCCAAGGATATTACTCAGCTTTGGAAGACAAACAAAGATTGCAGGAATAATTCCTGTAATTCCCATGTCATCCTACTGAAATAA

Protein Analysis

411

Amino Acids

45.29

Weight (kDa)

9.06

Isoelectric Point (pI)

31.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_3 PF13738 23 - 214 9.2e-27 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 23 - 209 6.2e-10 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 24 - 334 1e-25 Flavin-binding monooxygenase-like
Lys_Orn_oxgnase PF13434 88 - 203 2.1e-10 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011898)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 938
AasI GACNNNNNNGTC 1 cut(s) 90
Acc65I GGTACC 1 cut(s) 264
AccB1I GGYRCC 1 cut(s) 264
AccB7I CCANNNNNTGG 1 cut(s) 1068
AccI GTMKAC 1 cut(s) 729
AciI CCGC 1 cut(s) 354
AclWI GGATC 1 cut(s) 695
AcsI RAATTY 2 cut(s) 359, 571
AcuI CTGAAG 1 cut(s) 270
AfaI GTAC 5 cut(s) 266, 410, 462, 518, 986
AfiI CCNNNNNNNGG 7 cut(s) 48, 239, 375, 625, 803, 1038, 1068
AflII CTTAAG 1 cut(s) 788
AgsI TTSAA 5 cut(s) 59, 337, 364, 491, 721
AjnI CCWGG 1 cut(s) 339
AluBI AGCT 5 cut(s) 107, 229, 724, 817, 1168
AluI AGCT 5 cut(s) 107, 229, 724, 817, 1168
Alw26I GTCTC 3 cut(s) 98, 200, 1091
AlwI GGATC 1 cut(s) 695
Ama87I CYCGRG 1 cut(s) 143
AoxI GGCC 4 cut(s) 342, 493, 794, 805
ApeKI GCWGC 4 cut(s) 98, 101, 104, 175
ApoI RAATTY 2 cut(s) 359, 571
Asp700I GAANNNNTTC 1 cut(s) 486
Asp718I GGTACC 1 cut(s) 264
AspA2I CCTAGG 1 cut(s) 763
AspLEI GCGC 1 cut(s) 80
AspS9I GGNCC 3 cut(s) 83, 494, 806
AsuC2I CCSGG 1 cut(s) 49
AsuHPI GGTGA 4 cut(s) 197, 904, 916, 1021
AvaI CYCGRG 1 cut(s) 143
AvaII GGWCC 1 cut(s) 83
AvrII CCTAGG 1 cut(s) 763
BanI GGYRCC 1 cut(s) 264
BbsI GAAGAC 2 cut(s) 398, 1181
BbvI GCAGC 4 cut(s) 110, 113, 116, 187
BccI CCATC 6 cut(s) 94, 472, 623, 889, 1031, 1076
BceAI ACGGC 2 cut(s) 329, 1143
BciT130I CCWGG 1 cut(s) 341
BcnI CCSGG 1 cut(s) 49
BcoDI GTCTC 3 cut(s) 98, 200, 1091
BfaI CTAG 1 cut(s) 764
BfmI CTRYAG 1 cut(s) 601
BfrI CTTAAG 1 cut(s) 788
BglI GCCNNNNNGGC 1 cut(s) 1006
BisI GCNGC 4 cut(s) 99, 102, 105, 176
BlnI CCTAGG 1 cut(s) 763
BlpI GCTNAGC 1 cut(s) 450
BlsI GCNGC 4 cut(s) 100, 103, 106, 177
Bme1390I CCNGG 2 cut(s) 49, 341
Bme18I GGWCC 1 cut(s) 83
BmeT110I CYCGRG 1 cut(s) 143
BmgT120I GGNCC 3 cut(s) 83, 494, 806
BmiI GGNNCC 2 cut(s) 245, 266
BmrFI CCNGG 2 cut(s) 49, 341
BmrI ACTGGG 3 cut(s) 274, 836, 990
BmsI GCATC 3 cut(s) 173, 1032, 1126
BmuI ACTGGG 3 cut(s) 274, 836, 990
BpiI GAAGAC 2 cut(s) 398, 1181
Bpu1102I GCTNAGC 1 cut(s) 450
BpuEI CTTGAG 1 cut(s) 995
BpuMI CCSGG 1 cut(s) 49
BsaI GGTCTC 2 cut(s) 98, 1091
BsaJI CCNNGG 3 cut(s) 260, 763, 1152
BsaWI WCCGGW 1 cut(s) 463
BsaXI ACNNNNNCTCC 4 cut(s) 192, 222, 941, 971
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 239, 375, 625, 803, 1038, 1068
Bse118I RCCGGY 1 cut(s) 454
Bse1I ACTGG 5 cut(s) 280, 808, 835, 842, 985
Bse3DI GCAATG 2 cut(s) 699, 1000
BseBI CCWGG 1 cut(s) 341
BseDI CCNNGG 3 cut(s) 260, 763, 1152
BseGI GGATG 5 cut(s) 483, 615, 759, 1047, 1218
BseLI CCNNNNNNNGG 7 cut(s) 48, 239, 375, 625, 803, 1038, 1068
BseMI GCAATG 2 cut(s) 699, 1000
BseMII CTCAG 3 cut(s) 410, 441, 1178
BseNI ACTGG 5 cut(s) 280, 808, 835, 842, 985
BseXI GCAGC 4 cut(s) 110, 113, 116, 187
Bsh1285I CGRYCG 2 cut(s) 193, 459
BshFI GGCC 4 cut(s) 344, 495, 796, 807
BshNI GGYRCC 1 cut(s) 264
BsiEI CGRYCG 2 cut(s) 193, 459
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 3 cut(s) 48, 455, 464
BslI CCNNNNNNNGG 7 cut(s) 48, 239, 375, 625, 803, 1038, 1068
BsmAI GTCTC 3 cut(s) 98, 200, 1091
BsmBI CGTCTC 1 cut(s) 200
BsmI GAATGC 1 cut(s) 451
BsnI GGCC 4 cut(s) 344, 495, 796, 807
Bso31I GGTCTC 2 cut(s) 98, 1091
BsoBI CYCGRG 1 cut(s) 143
Bsp1407I TGTACA 1 cut(s) 516
Bsp143I GATC 1 cut(s) 687
Bsp1720I GCTNAGC 1 cut(s) 450
BspACI CCGC 1 cut(s) 354
BspANI GGCC 4 cut(s) 344, 495, 796, 807
BspCNI CTCAG 3 cut(s) 409, 442, 1177
BspLI GGNNCC 2 cut(s) 245, 266
BspPI GGATC 1 cut(s) 695
BspQI GCTCTTC 1 cut(s) 705
BspT107I GGYRCC 1 cut(s) 264
BspTI CTTAAG 1 cut(s) 788
BspTNI GGTCTC 2 cut(s) 98, 1091
BsrDI GCAATG 2 cut(s) 699, 1000
BsrFI RCCGGY 1 cut(s) 454
BsrGI TGTACA 1 cut(s) 516
BsrI ACTGG 5 cut(s) 280, 808, 835, 842, 985
BssAI RCCGGY 1 cut(s) 454
BssECI CCNNGG 3 cut(s) 260, 763, 1152
BssMI GATC 1 cut(s) 687
BssT1I CCWWGG 3 cut(s) 260, 763, 1152
Bst2UI CCWGG 1 cut(s) 341
Bst4CI ACNGT 4 cut(s) 194, 643, 734, 1096
Bst6I CTCTTC 2 cut(s) 705, 1105
BstAFI CTTAAG 1 cut(s) 788
BstAUI TGTACA 1 cut(s) 516
BstC8I GCNNGC 3 cut(s) 109, 227, 713
BstDEI CTNAG 4 cut(s) 396, 450, 973, 1164
BstF5I GGATG 5 cut(s) 483, 615, 759, 1047, 1218
BstHHI GCGC 1 cut(s) 80
BstKTI GATC 1 cut(s) 690
BstMAI GTCTC 3 cut(s) 98, 200, 1091
BstMBI GATC 1 cut(s) 687
BstMCI CGRYCG 2 cut(s) 193, 459
BstMWI GCNNNNNNNGC 5 cut(s) 104, 721, 793, 1006, 1136
BstNI CCWGG 1 cut(s) 341
BstSCI CCNGG 2 cut(s) 47, 339
BstSFI CTRYAG 1 cut(s) 601
BstV1I GCAGC 4 cut(s) 110, 113, 116, 187
BstV2I GAAGAC 2 cut(s) 398, 1181
BsuRI GGCC 4 cut(s) 344, 495, 796, 807
BtsCI GGATG 5 cut(s) 483, 615, 759, 1047, 1218
BtsIMutI CAGTG 3 cut(s) 639, 739, 828
Cac8I GCNNGC 3 cut(s) 109, 227, 713
CfoI GCGC 1 cut(s) 80
Cfr10I RCCGGY 1 cut(s) 454
Cfr13I GGNCC 3 cut(s) 83, 494, 806
Csp6I GTAC 5 cut(s) 265, 409, 461, 517, 985
CviAII CATG 5 cut(s) 238, 295, 580, 647, 1214
CviQI GTAC 5 cut(s) 265, 409, 461, 517, 985
DdeI CTNAG 4 cut(s) 396, 450, 973, 1164
DpnI GATC 1 cut(s) 689
DpnII GATC 1 cut(s) 687
DrdI GACNNNNNNGTC 1 cut(s) 90
DseDI GACNNNNNNGTC 1 cut(s) 90
Eam1104I CTCTTC 2 cut(s) 705, 1105
EarI CTCTTC 2 cut(s) 705, 1105
Eco130I CCWWGG 3 cut(s) 260, 763, 1152
Eco147I AGGCCT 1 cut(s) 796
Eco31I GGTCTC 2 cut(s) 98, 1091
Eco47I GGWCC 1 cut(s) 83
Eco57I CTGAAG 1 cut(s) 270
Eco88I CYCGRG 1 cut(s) 143
EcoO109I RGGNCCY 1 cut(s) 494
EcoRI GAATTC 1 cut(s) 359
EcoRII CCWGG 1 cut(s) 339
EcoT14I CCWWGG 3 cut(s) 260, 763, 1152
ErhI CCWWGG 3 cut(s) 260, 763, 1152
Esp3I CGTCTC 1 cut(s) 200
FaeI CATG 5 cut(s) 241, 298, 583, 650, 1217
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FatI CATG 5 cut(s) 237, 294, 579, 646, 1213
FauNDI CATATG 1 cut(s) 624
FblI GTMKAC 1 cut(s) 729
Fnu4HI GCNGC 4 cut(s) 99, 102, 105, 176
FokI GGATG 5 cut(s) 490, 602, 746, 1054, 1205
Fsp4HI GCNGC 4 cut(s) 99, 102, 105, 176
FspBI CTAG 1 cut(s) 764
GlaI GCGC 1 cut(s) 79
GluI GCNGC 4 cut(s) 99, 102, 105, 176
HaeIII GGCC 4 cut(s) 344, 495, 796, 807
HapII CCGG 3 cut(s) 48, 455, 464
HhaI GCGC 1 cut(s) 80
Hin1II CATG 5 cut(s) 241, 298, 583, 650, 1217
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
HindIII AAGCTT 1 cut(s) 722
HinfI GANTC 6 cut(s) 38, 52, 139, 299, 394, 962
HpaII CCGG 3 cut(s) 48, 455, 464
HphI GGTGA 4 cut(s) 197, 904, 916, 1021
Hpy166II GTNNAC 1 cut(s) 730
Hpy188I TCNGA 5 cut(s) 138, 154, 532, 539, 880
Hpy188III TCNNGA 5 cut(s) 143, 145, 349, 398, 848
Hpy8I GTNNAC 1 cut(s) 730
HpyAV CCTTC 4 cut(s) 141, 893, 901, 946
HpyCH4III ACNGT 4 cut(s) 194, 643, 734, 1096
HpyCH4V TGCA 2 cut(s) 159, 1191
HpyF10VI GCNNNNNNNGC 5 cut(s) 104, 721, 793, 1006, 1136
HpyF3I CTNAG 4 cut(s) 396, 450, 973, 1164
Hsp92II CATG 5 cut(s) 241, 298, 583, 650, 1217
HspAI GCGC 1 cut(s) 78
KpnI GGTACC 1 cut(s) 268
Kzo9I GATC 1 cut(s) 687
LguI GCTCTTC 1 cut(s) 705
LmnI GCTCC 2 cut(s) 857, 926
Lsp1109I GCAGC 4 cut(s) 110, 113, 116, 187
LweI GCATC 3 cut(s) 173, 1032, 1126
MaeI CTAG 1 cut(s) 764
MaeIII GTNAC 3 cut(s) 826, 864, 1019
MalI GATC 1 cut(s) 689
MboI GATC 1 cut(s) 687
MboII GAAGA 7 cut(s) 47, 263, 403, 494, 692, 1122, 1186
MfeI CAATTG 1 cut(s) 810
MlyI GAGTC 2 cut(s) 308, 388
MmeI TCCRAC 3 cut(s) 141, 177, 835
MnlI CCTC 8 cut(s) 122, 218, 243, 319, 608, 630, 786, 1106
MroXI GAANNNNTTC 1 cut(s) 486
MseI TTAA 2 cut(s) 789, 873
MslI CAYNNNNRTG 1 cut(s) 169
MspCI CTTAAG 1 cut(s) 788
MspI CCGG 3 cut(s) 48, 455, 464
MspR9I CCNGG 2 cut(s) 49, 341
MunI CAATTG 1 cut(s) 810
Mva1269I GAATGC 1 cut(s) 451
MvaI CCWGG 1 cut(s) 341
MwoI GCNNNNNNNGC 5 cut(s) 104, 721, 793, 1006, 1136
NciI CCSGG 1 cut(s) 49
NdeI CATATG 1 cut(s) 624
NdeII GATC 1 cut(s) 687
NlaIII CATG 5 cut(s) 241, 298, 583, 650, 1217
NlaIV GGNNCC 2 cut(s) 245, 266
NmuCI GTSAC 3 cut(s) 826, 864, 1019
PaeR7I CTCGAG 1 cut(s) 143
PceI AGGCCT 1 cut(s) 796
PciSI GCTCTTC 1 cut(s) 705
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 1 cut(s) 451
PdmI GAANNNNTTC 1 cut(s) 486
PfeI GAWTC 4 cut(s) 38, 52, 139, 962
PflFI GACNNNGTC 1 cut(s) 734
PflMI CCANNNNNTGG 1 cut(s) 1068
PfoI TCCNGGA 1 cut(s) 47
PkrI GCNGC 4 cut(s) 100, 103, 106, 177
PleI GAGTC 2 cut(s) 307, 388
PpsI GAGTC 2 cut(s) 307, 388
PsiI TTATAA 1 cut(s) 938
Psp6I CCWGG 1 cut(s) 339
PspGI CCWGG 1 cut(s) 339
PspN4I GGNNCC 2 cut(s) 245, 266
PspPI GGNCC 3 cut(s) 83, 494, 806
PsyI GACNNNGTC 1 cut(s) 734
RsaI GTAC 5 cut(s) 266, 410, 462, 518, 986
RsaNI GTAC 5 cut(s) 265, 409, 461, 517, 985
RseI CAYNNNNRTG 1 cut(s) 169
SapI GCTCTTC 1 cut(s) 705
SaqAI TTAA 2 cut(s) 789, 873
SatI GCNGC 4 cut(s) 99, 102, 105, 176
Sau3AI GATC 1 cut(s) 687
Sau96I GGNCC 3 cut(s) 83, 494, 806
SchI GAGTC 2 cut(s) 308, 388
ScrFI CCNGG 2 cut(s) 49, 341
SetI ASST 9 cut(s) 109, 210, 231, 266, 600, 726, 819, 894, 1170
SfaNI GCATC 3 cut(s) 173, 1032, 1126
SfcI CTRYAG 1 cut(s) 601
Sfr274I CTCGAG 1 cut(s) 143
SinI GGWCC 1 cut(s) 83
SlaI CTCGAG 1 cut(s) 143
SmiMI CAYNNNNRTG 1 cut(s) 169
SmlI CTYRAG 3 cut(s) 143, 788, 1010
SmoI CTYRAG 3 cut(s) 143, 788, 1010
SseBI AGGCCT 1 cut(s) 796
SsiI CCGC 1 cut(s) 354
SspMI CTAG 1 cut(s) 764
StuI AGGCCT 1 cut(s) 796
StyD4I CCNGG 2 cut(s) 47, 339
StyI CCWWGG 3 cut(s) 260, 763, 1152
TaaI ACNGT 4 cut(s) 194, 643, 734, 1096
TaqI TCGA 1 cut(s) 144
TatI WGTACW 2 cut(s) 408, 516
TfiI GAWTC 4 cut(s) 38, 52, 139, 962
Tru1I TTAA 2 cut(s) 789, 873
Tru9I TTAA 2 cut(s) 789, 873
TscAI CASTG 3 cut(s) 646, 739, 835
TseFI GTSAC 3 cut(s) 826, 864, 1019
TseI GCWGC 4 cut(s) 98, 101, 104, 175
Tsp45I GTSAC 3 cut(s) 826, 864, 1019
TspDTI ATGAA 4 cut(s) 274, 279, 635, 748
TspGWI ACGGA 1 cut(s) 358
TspRI CASTG 3 cut(s) 646, 739, 835
Tth111I GACNNNGTC 1 cut(s) 734
Van91I CCANNNNNTGG 1 cut(s) 1068
Vha464I CTTAAG 1 cut(s) 788
VpaK11BI GGWCC 1 cut(s) 83
XapI RAATTY 2 cut(s) 359, 571
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XhoI CTCGAG 1 cut(s) 143
XmaJI CCTAGG 1 cut(s) 763
XmiI GTMKAC 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 486
XspI CTAG 1 cut(s) 764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.