FvH4_2g30820

G-protein coupled receptor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
23783620 .. 23787831
4212 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g30820.t2

Sequence Viewer

Length: 597 bp
ATGTTTCATTTGTATGTTTGGGGGACATCACTAGTTGTGACGGTTGTGCGATCTATTGGGAATAACCATAGCCACCTAGGTACATGGTGTTGGGCACAGACTGGGTTTACAGGAAAGGCTCTTCACTTTATAACCTTTTATATGCCACTCTGGGGTGCAATTCTTTACAATGGTTTTACATACTTTCAAGTCATACGAATGCTGAACAATGCAAGGCGTATGGCAGGCAGCATATCCGACCGCCCTTACCAATCAGATGGCAGAGCAGAAACAAAGGCTTTGAACAGGTGGGGGTACTATCCGCTCATCCTGATAGGATCATGGGCTTTTGGCACCATCAACCGCATTCATGACTTCATTGAACCGGATCATAAAATATTTTGGCTCTCGGTTCTTGATGTTGGGACATCTGGACTCATGGGACTCTTCAATTCAATAGCCTATGGCTTGAATTCCTCAGTTCGACGGGCAATACAAGAAAGATTAGACCTGTTCTGGCCAGACAGGCTTCGAAGATGGTTCCCCAACAGTTCAAGGCTTAGGAACCAACACGAAGAGAGTGAGCTAGTATCACTAAAGATTCAAGATCAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0001101 GO:0003006 GO:0003674 GO:0004888 GO:0004930 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005887 GO:0006082 GO:0006109 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0007049 GO:0007154 GO:0007165 GO:0007186 GO:0007202 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009738 GO:0009741 GO:0009742 GO:0009755 GO:0009785 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009889 GO:0009908 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010162 GO:0010231 GO:0010244 GO:0010431 GO:0010517 GO:0010518 GO:0010646 GO:0010647 GO:0010648 GO:0010675 GO:0010863 GO:0010919 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016053 GO:0017144 GO:0019220 GO:0019222 GO:0019438 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030522 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0032960 GO:0033993 GO:0038023 GO:0042221 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043401 GO:0043436 GO:0044093 GO:0044214 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046394 GO:0048316 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051174 GO:0051336 GO:0051345 GO:0051716 GO:0060089 GO:0060191 GO:0060193 GO:0061458 GO:0062012 GO:0065007 GO:0065009 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071478 GO:0071482 GO:0071483 GO:0071495 GO:0071695 GO:0071704 GO:0071944 GO:0080090 GO:0089717 GO:0090351 GO:0090567 GO:0097305 GO:0097306 GO:0097437 GO:0098588 GO:0098805 GO:0104004 GO:1900274 GO:1901360 GO:1901362 GO:1901419 GO:1901420 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700 GO:1901701 GO:1902221 GO:1902223 GO:1902930 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

199

Amino Acids

23.04

Weight (kDa)

9.71

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dicty_CAR PF05462 26 - 273 2.9e-14 Slime mold cyclic AMP receptor
7tm_2 PF00002 27 - 192 1.8e-07 7 transmembrane receptor (Secretin family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012013)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 131
AccB1I GGYRCC 1 cut(s) 332
AccBSI CCGCTC 1 cut(s) 304
AciI CCGC 3 cut(s) 241, 302, 343
AclWI GGATC 2 cut(s) 325, 375
AcoI YGGCCR 1 cut(s) 497
AcsI RAATTY 1 cut(s) 451
AfaI GTAC 2 cut(s) 82, 296
AfiI CCNNNNNNNGG 1 cut(s) 152
AgsI TTSAA 8 cut(s) 188, 283, 362, 430, 435, 451, 534, 584
AhlI ACTAGT 1 cut(s) 31
AluBI AGCT 1 cut(s) 565
AluI AGCT 1 cut(s) 565
AlwI GGATC 2 cut(s) 325, 375
AoxI GGCC 1 cut(s) 497
ApeKI GCWGC 1 cut(s) 228
ApoI RAATTY 1 cut(s) 451
AspA2I CCTAGG 1 cut(s) 76
AsuII TTCGAA 1 cut(s) 511
AvrII CCTAGG 1 cut(s) 76
BaeGI GKGCMC 1 cut(s) 97
BalI TGGCCA 1 cut(s) 499
BanI GGYRCC 1 cut(s) 332
BbvI GCAGC 1 cut(s) 240
BccI CCATC 3 cut(s) 251, 344, 510
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 4 cut(s) 32, 77, 566, 595
BglI GCCNNNNNGGC 1 cut(s) 505
BisI GCNGC 1 cut(s) 229
BlnI CCTAGG 1 cut(s) 76
BlsI GCNGC 1 cut(s) 230
BmiI GGNNCC 3 cut(s) 334, 521, 545
BmrI ACTGGG 1 cut(s) 111
BmuI ACTGGG 1 cut(s) 111
Bpu10I CCTNAGC 1 cut(s) 539
Bpu14I TTCGAA 1 cut(s) 511
BsaJI CCNNGG 1 cut(s) 76
BsaWI WCCGGW 1 cut(s) 364
Bsc4I CCNNNNNNNGG 1 cut(s) 152
Bse1I ACTGG 1 cut(s) 106
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 1 cut(s) 306
BseLI CCNNNNNNNGG 1 cut(s) 152
BseMII CTCAG 1 cut(s) 471
BseNI ACTGG 1 cut(s) 106
BseSI GKGCMC 1 cut(s) 97
BseXI GCAGC 1 cut(s) 240
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 1 cut(s) 499
BshNI GGYRCC 1 cut(s) 332
BsiEI CGRYCG 1 cut(s) 241
BsiSI CCGG 1 cut(s) 365
BslFI GGGAC 3 cut(s) 37, 418, 435
BslI CCNNNNNNNGG 1 cut(s) 152
BsmFI GGGAC 3 cut(s) 37, 418, 435
BsmI GAATGC 2 cut(s) 204, 345
BsnI GGCC 1 cut(s) 499
Bsp119I TTCGAA 1 cut(s) 511
Bsp1286I GDGCHC 1 cut(s) 97
Bsp143I GATC 4 cut(s) 50, 317, 367, 586
BspACI CCGC 3 cut(s) 241, 302, 343
BspANI GGCC 1 cut(s) 499
BspCNI CTCAG 1 cut(s) 470
BspHI TCATGA 1 cut(s) 349
BspLI GGNNCC 3 cut(s) 334, 521, 545
BspPI GGATC 2 cut(s) 325, 375
BspQI GCTCTTC 1 cut(s) 126
BspT104I TTCGAA 1 cut(s) 511
BspT107I GGYRCC 1 cut(s) 332
BsrBI CCGCTC 1 cut(s) 304
BsrI ACTGG 1 cut(s) 106
BssECI CCNNGG 1 cut(s) 76
BssMI GATC 4 cut(s) 50, 317, 367, 586
BssT1I CCWWGG 1 cut(s) 76
Bst4CI ACNGT 2 cut(s) 43, 530
Bst6I CTCTTC 3 cut(s) 126, 431, 549
BstBI TTCGAA 1 cut(s) 511
BstC8I GCNNGC 1 cut(s) 226
BstDEI CTNAG 2 cut(s) 457, 539
BstF5I GGATG 1 cut(s) 306
BstKTI GATC 4 cut(s) 53, 320, 370, 589
BstMBI GATC 4 cut(s) 50, 317, 367, 586
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 1 cut(s) 505
BstSLI GKGCMC 1 cut(s) 97
BstV1I GCAGC 1 cut(s) 240
BstXI CCANNNNNNTGG 1 cut(s) 257
BsuRI GGCC 1 cut(s) 499
BtsCI GGATG 1 cut(s) 306
Cac8I GCNNGC 1 cut(s) 226
CciI TCATGA 1 cut(s) 349
Csp6I GTAC 2 cut(s) 81, 295
CviAII CATG 4 cut(s) 84, 321, 350, 418
CviQI GTAC 2 cut(s) 81, 295
DdeI CTNAG 2 cut(s) 457, 539
DpnI GATC 4 cut(s) 52, 319, 369, 588
DpnII GATC 4 cut(s) 50, 317, 367, 586
EaeI YGGCCR 1 cut(s) 497
Eam1104I CTCTTC 3 cut(s) 126, 431, 549
EarI CTCTTC 3 cut(s) 126, 431, 549
Eco130I CCWWGG 1 cut(s) 76
EcoRI GAATTC 1 cut(s) 451
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
FaeI CATG 4 cut(s) 87, 324, 353, 421
FaqI GGGAC 3 cut(s) 37, 418, 435
FatI CATG 4 cut(s) 83, 320, 349, 417
Fnu4HI GCNGC 1 cut(s) 229
FokI GGATG 1 cut(s) 293
Fsp4HI GCNGC 1 cut(s) 229
FspBI CTAG 4 cut(s) 32, 77, 566, 595
GluI GCNGC 1 cut(s) 229
HaeIII GGCC 1 cut(s) 499
HapII CCGG 1 cut(s) 365
Hin1II CATG 4 cut(s) 87, 324, 353, 421
HinfI GANTC 3 cut(s) 414, 423, 580
HpaII CCGG 1 cut(s) 365
Hpy166II GTNNAC 1 cut(s) 108
Hpy188I TCNGA 2 cut(s) 238, 256
Hpy188III TCNNGA 5 cut(s) 310, 350, 395, 411, 584
Hpy8I GTNNAC 1 cut(s) 108
Hpy99I CGWCG 1 cut(s) 468
HpyCH4III ACNGT 2 cut(s) 43, 530
HpyCH4V TGCA 2 cut(s) 158, 212
HpyF10VI GCNNNNNNNGC 1 cut(s) 505
HpyF3I CTNAG 2 cut(s) 457, 539
Hsp92II CATG 4 cut(s) 87, 324, 353, 421
Kzo9I GATC 4 cut(s) 50, 317, 367, 586
LguI GCTCTTC 1 cut(s) 126
Lsp1109I GCAGC 1 cut(s) 240
MaeI CTAG 4 cut(s) 32, 77, 566, 595
MaeIII GTNAC 1 cut(s) 37
MalI GATC 4 cut(s) 52, 319, 369, 588
MbiI CCGCTC 1 cut(s) 304
MboI GATC 4 cut(s) 50, 317, 367, 586
MboII GAAGA 4 cut(s) 113, 418, 525, 566
MhlI GDGCHC 1 cut(s) 97
MlsI TGGCCA 1 cut(s) 499
MluCI AATT 3 cut(s) 159, 430, 451
MluNI TGGCCA 1 cut(s) 499
MlyI GAGTC 2 cut(s) 408, 417
MmeI TCCRAC 1 cut(s) 261
MnlI CCTC 1 cut(s) 466
Mox20I TGGCCA 1 cut(s) 499
MscI TGGCCA 1 cut(s) 499
MslI CAYNNNNRTG 2 cut(s) 12, 197
Msp20I TGGCCA 1 cut(s) 499
MspI CCGG 1 cut(s) 365
Mva1269I GAATGC 2 cut(s) 204, 345
MwoI GCNNNNNNNGC 1 cut(s) 505
NdeII GATC 4 cut(s) 50, 317, 367, 586
NlaIII CATG 4 cut(s) 87, 324, 353, 421
NlaIV GGNNCC 3 cut(s) 334, 521, 545
NmuCI GTSAC 1 cut(s) 37
NspV TTCGAA 1 cut(s) 511
PagI TCATGA 1 cut(s) 349
PciSI GCTCTTC 1 cut(s) 126
PctI GAATGC 2 cut(s) 204, 345
PfeI GAWTC 1 cut(s) 580
PkrI GCNGC 1 cut(s) 230
PleI GAGTC 2 cut(s) 408, 417
PpsI GAGTC 2 cut(s) 408, 417
PsiI TTATAA 1 cut(s) 131
PspN4I GGNNCC 3 cut(s) 334, 521, 545
RsaI GTAC 2 cut(s) 82, 296
RsaNI GTAC 2 cut(s) 81, 295
RseI CAYNNNNRTG 2 cut(s) 12, 197
SapI GCTCTTC 1 cut(s) 126
SatI GCNGC 1 cut(s) 229
Sau3AI GATC 4 cut(s) 50, 317, 367, 586
SchI GAGTC 2 cut(s) 408, 417
SduI GDGCHC 1 cut(s) 97
SetI ASST 6 cut(s) 78, 82, 137, 290, 492, 567
SfuI TTCGAA 1 cut(s) 511
SmiMI CAYNNNNRTG 2 cut(s) 12, 197
SpeI ACTAGT 1 cut(s) 31
Sse9I AATT 3 cut(s) 159, 430, 451
SsiI CCGC 3 cut(s) 241, 302, 343
SspI AATATT 1 cut(s) 378
SspMI CTAG 4 cut(s) 32, 77, 566, 595
StyI CCWWGG 1 cut(s) 76
TaaI ACNGT 2 cut(s) 43, 530
TaqI TCGA 2 cut(s) 463, 511
TasI AATT 3 cut(s) 159, 430, 451
TfiI GAWTC 1 cut(s) 580
TseFI GTSAC 1 cut(s) 37
TseI GCWGC 1 cut(s) 228
Tsp45I GTSAC 1 cut(s) 37
TspDTI ATGAA 2 cut(s) 338, 346
XapI RAATTY 1 cut(s) 451
XmaJI CCTAGG 1 cut(s) 76
XspI CTAG 4 cut(s) 32, 77, 566, 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.