Prupe.1G402500_v2.0.a1

G-protein coupled receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012013
Physical Location & Seq
Reverse (-)
35488637 .. 35492160
3524 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G402500.1

Sequence Viewer

Length: 960 bp
ATGGCGGCGACGGGGCAAGTCGCCGGAGGACTGACGGAGTACGATCGCCAAGTGTTGACCGCAGTCAACGCCGGAGCGGCGAGCCTCTCATTCGTCGGGTCGGGCTTCATAGTCCTCTGCTACGTTCTCTTCAAAGAGCTCCGCAAGTTCTCCTTCAAGCTCGTATTCTACCTCGCCCTCTCTGATATGCTTTGTAGCTTCTTCAGCATGGTTGGGGATCCATCCAGAGGATTTTTCTGTTACTCGCATGGCTATAGCACTCATTTCTTCTGTGTAGCATCTTTCCTATGGACTACCACGATTGCTTTTACCCTCCACCGCACGGTTGTTAGACACAAAACGGATGTTGAAGATATGGAGGCAATGTTTCATTTGTATGTTTGGGGGACTTCACTAGTTATGACGGTGGTGCGCTCTATTGGTAATAACCATAGCCACCTTGGTACATGGTGTTGGTCACAATCAGGGCGTACTGGAAAGGCAATTCACTTTATAACATTTTATATGCCACTCTGGGGTGCAATTCTTTACAACGGTTTTACGTACTTTCAAGTGATAAGCATGCTGAAGAATGCAAGACGTATGGCAGTCGGCATGTCAGACCGGGCTTATCAATCTGATGCCAGAGCAGAAATGAAGGCTTTAAACCGGTGGGGATACTATCCCCTCATCCTGATAGGAGCATGGGCTTTTGGCACAATCAACCGCATTCATGACTTTATTGAACCAGGTCATAAAATATTTTGGCTCTCACTTCTTGATGTTGGGACATCTGCACTTATGGGCCTGTTCAACTCAATAGCCTATGGCTTGAACTCCTCAGTGCGACGGGCAATATATGAAAGGTTGGATCTGTTTTGGCCAGACAGACTTCAAAGATGGTTCCCAAACAGTTCAAGGTTTAGAAACCAACAGCAAGAGAGTGAACTAGTGGCACTGAAAATTGAAGATCAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0001101 GO:0003006 GO:0003674 GO:0004888 GO:0004930 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005887 GO:0006082 GO:0006109 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0007049 GO:0007154 GO:0007165 GO:0007186 GO:0007202 GO:0007275 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009738 GO:0009741 GO:0009742 GO:0009755 GO:0009785 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009889 GO:0009908 GO:0009937 GO:0009939 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010162 GO:0010231 GO:0010244 GO:0010431 GO:0010517 GO:0010518 GO:0010646 GO:0010647 GO:0010648 GO:0010675 GO:0010863 GO:0010919 GO:0012505 GO:0014070 GO:0016020 GO:0016021 GO:0016053 GO:0017144 GO:0019220 GO:0019222 GO:0019438 GO:0019752 GO:0021700 GO:0022414 GO:0022611 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030522 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0032960 GO:0033993 GO:0038023 GO:0042221 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043401 GO:0043436 GO:0044093 GO:0044214 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046394 GO:0048316 GO:0048367 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048545 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051174 GO:0051336 GO:0051345 GO:0051716 GO:0060089 GO:0060191 GO:0060193 GO:0061458 GO:0062012 GO:0065007 GO:0065009 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071478 GO:0071482 GO:0071483 GO:0071495 GO:0071695 GO:0071704 GO:0071944 GO:0080090 GO:0089717 GO:0090351 GO:0090567 GO:0097305 GO:0097306 GO:0097437 GO:0098588 GO:0098805 GO:0104004 GO:1900274 GO:1901360 GO:1901362 GO:1901419 GO:1901420 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1901700 GO:1901701 GO:1902221 GO:1902223 GO:1902930 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Dicty_CAR

Protein Analysis

320

Amino Acids

36.49

Weight (kDa)

9.17

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012013)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48270 AT1G48270
fragaria_vesca FvH4_2g30820
malus_domestica MD08G1073200.v1.1 MD15G1048100.v1.1
prunus_persica Prupe.1G402500_v2.0.a1 Prupe.1G402500_v2.0.a1
pyrus_communis pycom08g06060 pycom15g04710
rosa_chinensis RchiOBHm_Chr6g0312021
rosa_laevigata RLG00000010360
rosa_multiflora Rmu_sc0005381.1_g000008
rosa_roxburghii Rroxscaffold_7G00157120
rosa_rugosa Rorug06G0392300
rosa_samantha Rh6AG508700 Rh6BG520000 Rh6CG525900 Rh6DG511400
rosa_wichuraiana Rw6G044300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 494
AccBSI CCGCTC 1 cut(s) 77
AciI CCGC 6 cut(s) 5, 60, 77, 142, 319, 706
AclWI GGATC 3 cut(s) 212, 225, 858
AcoI YGGCCR 1 cut(s) 860
AcuI CTGAAG 2 cut(s) 187, 587
AfaI GTAC 4 cut(s) 41, 445, 472, 545
AfiI CCNNNNNNNGG 3 cut(s) 227, 322, 515
AgeI ACCGGT 1 cut(s) 648
AhlI ACTAGT 2 cut(s) 394, 928
AjnI CCWGG 1 cut(s) 727
AluBI AGCT 3 cut(s) 139, 160, 198
AluI AGCT 3 cut(s) 139, 160, 198
Alw21I GWGCWC 1 cut(s) 141
AlwI GGATC 3 cut(s) 212, 225, 858
AoxI GGCC 2 cut(s) 784, 860
AsiGI ACCGGT 1 cut(s) 648
AspLEI GCGC 1 cut(s) 414
AspS9I GGNCC 1 cut(s) 784
AsuC2I CCSGG 1 cut(s) 605
BalI TGGCCA 1 cut(s) 862
BamHI GGATCC 1 cut(s) 217
BanII GRGCYC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 141
BccI CCATC 2 cut(s) 229, 873
BciT130I CCWGG 1 cut(s) 729
BciVI GTATCC 1 cut(s) 650
BcnI CCSGG 1 cut(s) 605
BcuI ACTAGT 2 cut(s) 394, 928
BfaI CTAG 3 cut(s) 395, 929, 958
BfmI CTRYAG 1 cut(s) 253
BfuI GTATCC 1 cut(s) 650
BglI GCCNNNNNGGC 1 cut(s) 77
BisI GCNGC 2 cut(s) 6, 78
BlsI GCNGC 2 cut(s) 7, 79
Bme1390I CCNGG 2 cut(s) 605, 729
BmgT120I GGNCC 1 cut(s) 784
BmiI GGNNCC 2 cut(s) 219, 884
BmrFI CCNGG 2 cut(s) 605, 729
BmsI GCATC 2 cut(s) 287, 610
BoxI GACNNNNGTC 1 cut(s) 62
BpuMI CCSGG 1 cut(s) 605
BsaAI YACGTR 1 cut(s) 543
BsaJI CCNNGG 1 cut(s) 439
BsaWI WCCGGW 1 cut(s) 648
BsaXI ACNNNNNCTCC 2 cut(s) 350, 380
Bsc4I CCNNNNNNNGG 3 cut(s) 227, 322, 515
Bse118I RCCGGY 1 cut(s) 648
Bse1I ACTGG 1 cut(s) 478
Bse3DI GCAATG 1 cut(s) 369
BseBI CCWGG 1 cut(s) 729
BseDI CCNNGG 1 cut(s) 439
BseGI GGATG 3 cut(s) 221, 349, 669
BseLI CCNNNNNNNGG 3 cut(s) 227, 322, 515
BseMI GCAATG 1 cut(s) 369
BseMII CTCAG 1 cut(s) 834
BseNI ACTGG 1 cut(s) 478
BseRI GAGGAG 1 cut(s) 808
BsgI GTGCAG 1 cut(s) 759
Bsh1285I CGRYCG 1 cut(s) 46
BshFI GGCC 2 cut(s) 786, 862
BshTI ACCGGT 1 cut(s) 648
BsiEI CGRYCG 1 cut(s) 46
BsiHKAI GWGCWC 1 cut(s) 141
BsiSI CCGG 4 cut(s) 24, 72, 604, 649
BslFI GGGAC 2 cut(s) 400, 781
BslI CCNNNNNNNGG 3 cut(s) 227, 322, 515
BsmFI GGGAC 2 cut(s) 400, 781
BsmI GAATGC 2 cut(s) 577, 708
BsnI GGCC 2 cut(s) 786, 862
Bsp1286I GDGCHC 1 cut(s) 141
Bsp143I GATC 4 cut(s) 43, 217, 850, 949
BspACI CCGC 6 cut(s) 5, 60, 77, 142, 319, 706
BspANI GGCC 2 cut(s) 786, 862
BspCNI CTCAG 1 cut(s) 833
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 2 cut(s) 219, 884
BspPI GGATC 3 cut(s) 212, 225, 858
BsrBI CCGCTC 1 cut(s) 77
BsrDI GCAATG 1 cut(s) 369
BsrFI RCCGGY 1 cut(s) 648
BsrI ACTGG 1 cut(s) 478
BssAI RCCGGY 1 cut(s) 648
BssECI CCNNGG 1 cut(s) 439
BssMI GATC 4 cut(s) 43, 217, 850, 949
BssT1I CCWWGG 1 cut(s) 439
Bst2UI CCWGG 1 cut(s) 729
Bst4CI ACNGT 4 cut(s) 325, 406, 536, 893
Bst6I CTCTTC 1 cut(s) 134
BstBAI YACGTR 1 cut(s) 543
BstC8I GCNNGC 2 cut(s) 82, 563
BstDEI CTNAG 1 cut(s) 820
BstF5I GGATG 3 cut(s) 221, 349, 669
BstHHI GCGC 1 cut(s) 414
BstKTI GATC 4 cut(s) 46, 220, 853, 952
BstMBI GATC 4 cut(s) 43, 217, 850, 949
BstMCI CGRYCG 1 cut(s) 46
BstMWI GCNNNNNNNGC 3 cut(s) 68, 77, 204
BstNI CCWGG 1 cut(s) 729
BstNSI RCATGY 2 cut(s) 565, 598
BstPAI GACNNNNGTC 1 cut(s) 62
BstSCI CCNGG 2 cut(s) 603, 727
BstSFI CTRYAG 1 cut(s) 253
BstSNI TACGTA 1 cut(s) 543
BstX2I RGATCY 2 cut(s) 217, 850
BstYI RGATCY 2 cut(s) 217, 850
BsuI GTATCC 1 cut(s) 650
BsuRI GGCC 2 cut(s) 786, 862
BtsCI GGATG 3 cut(s) 221, 349, 669
BtsIMutI CAGTG 2 cut(s) 828, 935
Cac8I GCNNGC 2 cut(s) 82, 563
CciI TCATGA 1 cut(s) 712
CfoI GCGC 1 cut(s) 414
Cfr10I RCCGGY 1 cut(s) 648
Cfr13I GGNCC 1 cut(s) 784
CsiI ACCWGGT 1 cut(s) 727
Csp6I GTAC 4 cut(s) 40, 444, 471, 544
CspAI ACCGGT 1 cut(s) 648
CviAII CATG 7 cut(s) 208, 248, 447, 562, 595, 684, 713
CviQI GTAC 4 cut(s) 40, 444, 471, 544
DdeI CTNAG 1 cut(s) 820
DpnI GATC 4 cut(s) 45, 219, 852, 951
DpnII GATC 4 cut(s) 43, 217, 850, 949
DraI TTTAAA 1 cut(s) 645
EaeI YGGCCR 1 cut(s) 860
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
Ecl136II GAGCTC 1 cut(s) 139
Eco105I TACGTA 1 cut(s) 543
Eco130I CCWWGG 1 cut(s) 439
Eco24I GRGCYC 1 cut(s) 141
Eco53kI GAGCTC 1 cut(s) 139
Eco57I CTGAAG 2 cut(s) 187, 587
EcoICRI GAGCTC 1 cut(s) 139
EcoRII CCWGG 1 cut(s) 727
EcoT14I CCWWGG 1 cut(s) 439
EcoT38I GRGCYC 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 439
FaeI CATG 7 cut(s) 211, 251, 450, 565, 598, 687, 716
FalI AAGNNNNNCTT 2 cut(s) 137, 169
FaqI GGGAC 2 cut(s) 400, 781
FatI CATG 7 cut(s) 207, 247, 446, 561, 594, 683, 712
Fnu4HI GCNGC 2 cut(s) 6, 78
FokI GGATG 3 cut(s) 208, 356, 656
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 2 cut(s) 6, 78
FspBI CTAG 3 cut(s) 395, 929, 958
GlaI GCGC 1 cut(s) 413
GluI GCNGC 2 cut(s) 6, 78
HaeIII GGCC 2 cut(s) 786, 862
HapII CCGG 4 cut(s) 24, 72, 604, 649
HhaI GCGC 1 cut(s) 414
Hin1II CATG 7 cut(s) 211, 251, 450, 565, 598, 687, 716
Hin6I GCGC 1 cut(s) 412
HinP1I GCGC 1 cut(s) 412
HincII GTYRAC 2 cut(s) 57, 67
HindII GTYRAC 2 cut(s) 57, 67
HpaII CCGG 4 cut(s) 24, 72, 604, 649
Hpy166II GTNNAC 3 cut(s) 57, 67, 926
Hpy188I TCNGA 3 cut(s) 184, 601, 619
Hpy188III TCNNGA 4 cut(s) 225, 673, 713, 758
Hpy8I GTNNAC 3 cut(s) 57, 67, 926
Hpy99I CGWCG 3 cut(s) 13, 98, 831
HpyAV CCTTC 2 cut(s) 163, 631
HpyCH4III ACNGT 4 cut(s) 325, 406, 536, 893
HpyCH4IV ACGT 3 cut(s) 123, 542, 580
HpyCH4V TGCA 3 cut(s) 521, 575, 776
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 77, 204
HpyF3I CTNAG 1 cut(s) 820
HpySE526I ACGT 3 cut(s) 123, 542, 580
Hsp92II CATG 7 cut(s) 211, 251, 450, 565, 598, 687, 716
HspAI GCGC 1 cut(s) 412
Kzo9I GATC 4 cut(s) 43, 217, 850, 949
LmnI GCTCC 3 cut(s) 74, 144, 680
LweI GCATC 2 cut(s) 287, 610
MabI ACCWGGT 1 cut(s) 727
MaeI CTAG 3 cut(s) 395, 929, 958
MaeII ACGT 3 cut(s) 123, 542, 580
MaeIII GTNAC 2 cut(s) 239, 456
MalI GATC 4 cut(s) 45, 219, 852, 951
MbiI CCGCTC 1 cut(s) 77
MboI GATC 4 cut(s) 43, 217, 850, 949
MboII GAAGA 6 cut(s) 121, 193, 259, 362, 580, 959
MflI RGATCY 2 cut(s) 217, 850
MhlI GDGCHC 1 cut(s) 141
MlsI TGGCCA 1 cut(s) 862
MluCI AATT 3 cut(s) 483, 522, 942
MluNI TGGCCA 1 cut(s) 862
MmeI TCCRAC 1 cut(s) 828
Mox20I TGGCCA 1 cut(s) 862
MscI TGGCCA 1 cut(s) 862
MseI TTAA 1 cut(s) 644
MslI CAYNNNNRTG 1 cut(s) 375
Msp20I TGGCCA 1 cut(s) 862
MspI CCGG 4 cut(s) 24, 72, 604, 649
MspR9I CCNGG 2 cut(s) 605, 729
Mva1269I GAATGC 2 cut(s) 577, 708
MvaI CCWGG 1 cut(s) 729
MwoI GCNNNNNNNGC 3 cut(s) 68, 77, 204
NciI CCSGG 1 cut(s) 605
NdeII GATC 4 cut(s) 43, 217, 850, 949
NlaIII CATG 7 cut(s) 211, 251, 450, 565, 598, 687, 716
NlaIV GGNNCC 2 cut(s) 219, 884
NmuCI GTSAC 1 cut(s) 456
NspI RCATGY 2 cut(s) 565, 598
PaeI GCATGC 1 cut(s) 565
PagI TCATGA 1 cut(s) 712
PctI GAATGC 2 cut(s) 577, 708
PinAI ACCGGT 1 cut(s) 648
PkrI GCNGC 2 cut(s) 7, 79
Ple19I CGATCG 1 cut(s) 46
Ppu21I YACGTR 1 cut(s) 543
PshAI GACNNNNGTC 1 cut(s) 62
PsiI TTATAA 1 cut(s) 494
Psp124BI GAGCTC 1 cut(s) 141
Psp6I CCWGG 1 cut(s) 727
PspGI CCWGG 1 cut(s) 727
PspN4I GGNNCC 2 cut(s) 219, 884
PspPI GGNCC 1 cut(s) 784
PsuI RGATCY 2 cut(s) 217, 850
PvuI CGATCG 1 cut(s) 46
RsaI GTAC 4 cut(s) 41, 445, 472, 545
RsaNI GTAC 4 cut(s) 40, 444, 471, 544
RseI CAYNNNNRTG 1 cut(s) 375
SacI GAGCTC 1 cut(s) 141
SaqAI TTAA 1 cut(s) 644
SatI GCNGC 2 cut(s) 6, 78
Sau3AI GATC 4 cut(s) 43, 217, 850, 949
Sau96I GGNCC 1 cut(s) 784
ScrFI CCNGG 2 cut(s) 605, 729
SduI GDGCHC 1 cut(s) 141
SexAI ACCWGGT 1 cut(s) 727
SfaNI GCATC 2 cut(s) 287, 610
SfcI CTRYAG 1 cut(s) 253
SmiMI CAYNNNNRTG 1 cut(s) 375
SnaBI TACGTA 1 cut(s) 543
SpeI ACTAGT 2 cut(s) 394, 928
SphI GCATGC 1 cut(s) 565
Sse9I AATT 3 cut(s) 483, 522, 942
SsiI CCGC 6 cut(s) 5, 60, 77, 142, 319, 706
SspI AATATT 1 cut(s) 741
SspMI CTAG 3 cut(s) 395, 929, 958
SstI GAGCTC 1 cut(s) 141
StyD4I CCNGG 2 cut(s) 603, 727
StyI CCWWGG 1 cut(s) 439
TaaI ACNGT 4 cut(s) 325, 406, 536, 893
TaiI ACGT 3 cut(s) 126, 545, 583
TasI AATT 3 cut(s) 483, 522, 942
TauI GCSGC 2 cut(s) 8, 80
Tru1I TTAA 1 cut(s) 644
Tru9I TTAA 1 cut(s) 644
TscAI CASTG 2 cut(s) 828, 942
TseFI GTSAC 1 cut(s) 456
Tsp45I GTSAC 1 cut(s) 456
TspDTI ATGAA 5 cut(s) 97, 359, 650, 701, 855
TspGWI ACGGA 2 cut(s) 50, 356
TspRI CASTG 2 cut(s) 828, 942
XceI RCATGY 2 cut(s) 565, 598
XcmI CCANNNNNNNNNTGG 1 cut(s) 437
XspI CTAG 3 cut(s) 395, 929, 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.