Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0010638

Physical Location & Seq

Genomic Coordinates Reverse (-)

24623368 .. 24627275

Gene Structure 3908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g32500.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGGTGGTGGATCAGTACCTGTTGGCCTGGATCTTCGCCTCCGTCATAGCTCTCATAGCGATGTACGGCACGGTGGCGACGAGGCGGAGAAATAACAACCGCCGAGCTTCGCTGGAGGAGGAGGAGAGAAGCCGCGGCTGCCTCATGGTCTCAGACGCGGAATGCAGATCGGCTGACGGCGACGTTGACGTCATCATCGTCGGCGCCGGTGTTGCCGGCTCTGCTCTGGCTCACACTCTCGGAAAGGATGGACGTCAAGTGCGTGTGATTGAACGAGATTTGACAGAGCCAGACCGTATTGTTGGTGAACTGTTACAACCTGGAGGCTACCTCAAATTAATTGAGCTGGGACTTGAAGATTGTGTGGAGGAAATTGATGCTCAGCGAGTGTTTGGTTATGCTCTATTCAAGGACGGGAAAAATACTCGGCTCTCTTACCCCTTGGAGAAATTTCACTCAGATGTGTCTGGGAGGAGCTTCCATAATGGCCGTTTCATACAGAGGATGCGAGATAAGGCGGCAACTCTTCCCAATGTGCAATTGGAGCAAGGAACAGTTACTTCTCTGCTTGAAGAAAAGGGAACAATTAAAGGTGTGCAATACAAGACTAAAACAGGTCAAGAGATGACAGCATATGCACCTCTTACCATTGTTTGTGATGGCTGTTTCTCTAACTTGAGGCGCTCTCTTTGCGATCCTAAGGTGGATGTGCCTTCTTGTTTTGTTGGTCTGATTCTGGAGAACTGTGATCTTCCACATGCAAATCACGGGCATGTTATCTTAGCAGACCCTTCCCCTATCTTGTTCTATCAGATCAGTAGTACAGAGGTTCGCTGTCTGGTTGATGTACCTGGACAAAAGGTTCCTTCCATTTCAAATGGTGAAATGGCCAAGTATTTGAAGACCGTGGTGGCTCCTCAGATTCCCCCTCAAATTTATGATGCCTTTGTAGCTGCAGTTGATAAAGGTAACATCAGGACAATGCCAAACAGAAGCATGCCTGCCGCTCCCTATCCTACTCCTGGAGCTTTATTGATGGGGGATGCATTCAACATGCGCCACCCTCTAACTGGGGGAGGAATGACTGTGGCATTGTCTGATATTGTTGTGCTCCGGGATCTTCTCAGGCCTTTGTGCACCCTAAATGATGCACCTACTCTATCCAAATATCTTGAATCCTTTTACACACTGCGGAAGCCAGTGGCATCCACCATAAATACATTGGCAGGGGCCCTTTATAAGGTCTTTTCATCTTCTCCTGATCAAGCAAGGAAGGAAATGCGCCAGGCTTGCTTTGATTATCTGAGTCTCGGAGGTGTATTCTCTATGGGACCAGTCTCTCTACTCTCAGGACTAAACCCTCGCCCCTTGAGTTTGGTTACCCATTTCTTTGCTGTCGCAGTATATGGTGTTGGTCGACTTTTGCTGCCATTCCCATCACCTAAACGCCTTTGGATTGGTGCCAGACTAATCTCTAGTGCCTCGGGAATCATTTTCCCCATAATTAAGGCAGAAGGGGTTAGGCAAATGTTTTTTCCTGCAACAGTTCCAGCGTATTACAGAACCCCCGTCTCAAGTGAAAAGATGAGAAAGAAGGATGATGGCAGAATTGCAGATGATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006629 GO:0006694 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0012505 GO:0016125 GO:0016126 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Protein Analysis

542

Amino Acids

59.3

Weight (kDa)

8.63

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	13 - 327	7e-20	FAD binding domain
SE	PF08491	165 - 437	5.3e-120	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58440
fragaria_vesca	FvH4_2g32500 FvH4_2g32500 FvH4_2g32500
malus_domestica	MD08G1076800.v1.1 MD15G1064100.v1.1
prunus_persica	Prupe.1G418100_v2.0.a1 Prupe.1G418100_v2.0.a1
pyrus_communis	pycom08g06360 pycom15g06080
rosa_chinensis	RchiOBHm_Chr6g0310151
rosa_laevigata	RLG00000010504
rosa_multiflora	Rmu_sc0008163.1_g000004
rosa_roxburghii	Rroxscaffold_7G00158810
rosa_rugosa	Rorug06G0377700 Rorug06G0377800
rosa_samantha	Rh6AG491900 Rh6BG501500 Rh6CG506600
rosa_wichuraiana	Rw6G042800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1239
AasI	GACNNNNNNGTC	1 cut(s)	188
AatII	GACGTC	2 cut(s)	192, 256
AccB1I	GGYRCC	2 cut(s)	203, 1460
AccBSI	CCGCTC	1 cut(s)	1007
AccI	GTMKAC	1 cut(s)	1417
AccII	CGCG	2 cut(s)	135, 158
AciI	CCGC	8 cut(s)	85, 100, 133, 135, 158, 518, 1005, 1192
AclWI	GGATC	4 cut(s)	18, 38, 689, 1125
AcoI	YGGCCR	2 cut(s)	487, 888
AcsI	RAATTY	2 cut(s)	449, 933
AcyI	GRCGYC	3 cut(s)	189, 204, 253
AfaI	GTAC	4 cut(s)	17, 65, 823, 849
AfiI	CCNNNNNNNGG	3 cut(s)	1022, 1070, 1240
AgsI	TTSAA	8 cut(s)	272, 356, 409, 572, 876, 901, 1051, 1175
AjnI	CCWGG	5 cut(s)	26, 319, 850, 1021, 1284
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
AluBI	AGCT	6 cut(s)	50, 107, 346, 477, 953, 1028
AluI	AGCT	6 cut(s)	50, 107, 346, 477, 953, 1028
Alw21I	GWGCWC	2 cut(s)	1113, 1139
Alw26I	GTCTC	4 cut(s)	154, 1313, 1342, 1576
Alw44I	GTGCAC	1 cut(s)	1135
AlwI	GGATC	4 cut(s)	18, 38, 689, 1125
AlwNI	CAGNNNCTG	1 cut(s)	19
Ama87I	CYCGRG	1 cut(s)	1483
AoxI	GGCC	5 cut(s)	24, 487, 888, 1127, 1230
ApaI	GGGCCC	1 cut(s)	1234
ApaLI	GTGCAC	1 cut(s)	1135
ApeKI	GCWGC	3 cut(s)	138, 953, 1426
ApoI	RAATTY	2 cut(s)	449, 933
AseI	ATTAAT	1 cut(s)	338
AspLEI	GCGC	4 cut(s)	206, 684, 1059, 1284
AspS9I	GGNCC	3 cut(s)	1230, 1231, 1331
AsuC2I	CCSGG	1 cut(s)	1115
AsuHPI	GGTGA	3 cut(s)	317, 893, 1431
AvaI	CYCGRG	1 cut(s)	1483
AvaII	GGWCC	1 cut(s)	1331
AxyI	CCTNAGG	1 cut(s)	699
BaeGI	GKGCMC	2 cut(s)	1139, 1234
BalI	TGGCCA	1 cut(s)	890
BanI	GGYRCC	2 cut(s)	203, 1460
BanII	GRGCYC	1 cut(s)	1234
BbsI	GAAGAC	1 cut(s)	908
Bbv12I	GWGCWC	2 cut(s)	1113, 1139
BbvI	GCAGC	3 cut(s)	125, 940, 1413
BccI	CCATC	5 cut(s)	242, 653, 1030, 1444, 1595
BceAI	ACGGC	3 cut(s)	82, 193, 474
BciT130I	CCWGG	5 cut(s)	28, 321, 852, 1023, 1286
BclI	TGATCA	1 cut(s)	1261
BcnI	CCSGG	1 cut(s)	1115
BcoDI	GTCTC	4 cut(s)	154, 1313, 1342, 1576
BfaI	CTAG	1 cut(s)	1476
BfmI	CTRYAG	1 cut(s)	954
BfoI	RGCGCY	2 cut(s)	207, 685
BisI	GCNGC	7 cut(s)	133, 136, 139, 519, 954, 1005, 1427
BlpI	GCTNAGC	1 cut(s)	381
BlsI	GCNGC	7 cut(s)	134, 137, 140, 520, 955, 1006, 1428
Bme1390I	CCNGG	6 cut(s)	28, 321, 852, 1023, 1115, 1286
Bme18I	GGWCC	1 cut(s)	1331
BmeT110I	CYCGRG	1 cut(s)	1483
BmgT120I	GGNCC	3 cut(s)	1230, 1231, 1331
BmiI	GGNNCC	7 cut(s)	205, 864, 915, 1231, 1232, 1332, 1462
BmrFI	CCNGG	6 cut(s)	28, 321, 852, 1023, 1115, 1286
BmrI	ACTGGG	1 cut(s)	1080
BmsI	GCATC	6 cut(s)	367, 495, 931, 1033, 1138, 1214
BmuI	ACTGGG	1 cut(s)	1080
BpiI	GAAGAC	1 cut(s)	908
BplI	GAGNNNNNCTC	4 cut(s)	315, 347, 670, 702
BpmI	CTGGAG	4 cut(s)	134, 342, 758, 1044
Bpu1102I	GCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	3 cut(s)	697, 1390, 1558
BpuMI	CCSGG	1 cut(s)	1115
BsaHI	GRCGYC	3 cut(s)	189, 204, 253
BsaI	GGTCTC	1 cut(s)	154
BsaJI	CCNNGG	4 cut(s)	133, 441, 906, 1482
Bsc4I	CCNNNNNNNGG	3 cut(s)	1022, 1070, 1240
Bse118I	RCCGGY	2 cut(s)	206, 215
Bse1I	ACTGG	3 cut(s)	1075, 1199, 1334
Bse21I	CCTNAGG	1 cut(s)	699
BseBI	CCWGG	5 cut(s)	28, 321, 852, 1023, 1286
BseDI	CCNNGG	4 cut(s)	133, 441, 906, 1482
BseGI	GGATG	6 cut(s)	253, 510, 712, 1048, 1205, 1603
BseLI	CCNNNNNNNGG	3 cut(s)	1022, 1070, 1240
BseMII	CTCAG	7 cut(s)	165, 395, 471, 932, 1138, 1295, 1362
BseNI	ACTGG	3 cut(s)	1075, 1199, 1334
BseRI	GAGGAG	5 cut(s)	131, 134, 137, 487, 906
BseSI	GKGCMC	2 cut(s)	1139, 1234
BseXI	GCAGC	3 cut(s)	125, 940, 1413
BseYI	CCCAGC	1 cut(s)	346
Bsh1236I	CGCG	2 cut(s)	135, 158
BshFI	GGCC	5 cut(s)	26, 489, 890, 1129, 1232
BshNI	GGYRCC	2 cut(s)	203, 1460
BsiHKAI	GWGCWC	2 cut(s)	1113, 1139
BsiHKCI	CYCGRG	1 cut(s)	1483
BsiSI	CCGG	3 cut(s)	207, 216, 1114
BslFI	GGGAC	2 cut(s)	363, 1344
BslI	CCNNNNNNNGG	3 cut(s)	1022, 1070, 1240
BsmAI	GTCTC	4 cut(s)	154, 1313, 1342, 1576
BsmBI	CGTCTC	1 cut(s)	1576
BsmFI	GGGAC	2 cut(s)	363, 1344
BsmI	GAATGC	2 cut(s)	167, 1046
BsnI	GGCC	5 cut(s)	26, 489, 890, 1129, 1232
Bso31I	GGTCTC	1 cut(s)	154
BsoBI	CYCGRG	1 cut(s)	1483
Bsp120I	GGGCCC	1 cut(s)	1230
Bsp1286I	GDGCHC	3 cut(s)	1113, 1139, 1234
Bsp143I	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
Bsp1720I	GCTNAGC	1 cut(s)	381
BspACI	CCGC	8 cut(s)	85, 100, 133, 135, 158, 518, 1005, 1192
BspANI	GGCC	5 cut(s)	26, 489, 890, 1129, 1232
BspCNI	CTCAG	7 cut(s)	164, 394, 470, 931, 1137, 1296, 1361
BspFNI	CGCG	2 cut(s)	135, 158
BspLI	GGNNCC	7 cut(s)	205, 864, 915, 1231, 1232, 1332, 1462
BspMAI	CTGCAG	1 cut(s)	958
BspPI	GGATC	4 cut(s)	18, 38, 689, 1125
BspT107I	GGYRCC	2 cut(s)	203, 1460
BspTNI	GGTCTC	1 cut(s)	154
BsrBI	CCGCTC	1 cut(s)	1007
BsrFI	RCCGGY	2 cut(s)	206, 215
BsrI	ACTGG	3 cut(s)	1075, 1199, 1334
BssAI	RCCGGY	2 cut(s)	206, 215
BssECI	CCNNGG	4 cut(s)	133, 441, 906, 1482
BssMI	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
BssNI	GRCGYC	3 cut(s)	189, 204, 253
BssT1I	CCWWGG	1 cut(s)	441
Bst2UI	CCWGG	5 cut(s)	28, 321, 852, 1023, 1286
Bst4CI	ACNGT	8 cut(s)	73, 296, 312, 556, 746, 907, 1087, 1546
Bst6I	CTCTTC	1 cut(s)	531
BstACI	GRCGYC	3 cut(s)	189, 204, 253
BstC8I	GCNNGC	4 cut(s)	217, 998, 1002, 1291
BstDEI	CTNAG	9 cut(s)	151, 381, 457, 699, 781, 918, 1124, 1304, 1348
BstDSI	CCRYGG	2 cut(s)	133, 906
BstEII	GGTNACC	1 cut(s)	1378
BstENI	CCTNNNNNAGG	1 cut(s)	1238
BstF5I	GGATG	6 cut(s)	253, 510, 712, 1048, 1205, 1603
BstFNI	CGCG	2 cut(s)	135, 158
BstH2I	RGCGCY	2 cut(s)	207, 685
BstHHI	GCGC	4 cut(s)	206, 684, 1059, 1284
BstKTI	GATC	8 cut(s)	13, 33, 170, 697, 751, 816, 1120, 1264
BstMAI	GTCTC	4 cut(s)	154, 1313, 1342, 1576
BstMBI	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
BstMWI	GCNNNNNNNGC	8 cut(s)	56, 138, 212, 221, 544, 690, 950, 1290
BstNI	CCWGG	5 cut(s)	28, 321, 852, 1023, 1286
BstNSI	RCATGY	4 cut(s)	761, 776, 1000, 1057
BstPI	GGTNACC	1 cut(s)	1378
BstSCI	CCNGG	6 cut(s)	26, 319, 850, 1021, 1113, 1284
BstSFI	CTRYAG	1 cut(s)	954
BstSLI	GKGCMC	2 cut(s)	1139, 1234
BstUI	CGCG	2 cut(s)	135, 158
BstV1I	GCAGC	3 cut(s)	125, 940, 1413
BstV2I	GAAGAC	1 cut(s)	908
BstX2I	RGATCY	2 cut(s)	30, 1117
BstYI	RGATCY	2 cut(s)	30, 1117
Bsu36I	CCTNAGG	1 cut(s)	699
BsuRI	GGCC	5 cut(s)	26, 489, 890, 1129, 1232
BtgI	CCRYGG	2 cut(s)	133, 906
BtgZI	GCGATG	1 cut(s)	74
BtsCI	GGATG	6 cut(s)	253, 510, 712, 1048, 1205, 1603
BtsI	GCAGTG	1 cut(s)	1187
BtsIMutI	CAGTG	2 cut(s)	1187, 1206
Cac8I	GCNNGC	4 cut(s)	217, 998, 1002, 1291
CaiI	CAGNNNCTG	1 cut(s)	19
CfoI	GCGC	4 cut(s)	206, 684, 1059, 1284
Cfr10I	RCCGGY	2 cut(s)	206, 215
Cfr13I	GGNCC	3 cut(s)	1230, 1231, 1331
Cfr42I	CCGCGG	1 cut(s)	136
CseI	GACGC	1 cut(s)	164
Csp6I	GTAC	4 cut(s)	16, 64, 822, 848
CviAII	CATG	5 cut(s)	145, 758, 773, 997, 1054
CviQI	GTAC	4 cut(s)	16, 64, 822, 848
DdeI	CTNAG	9 cut(s)	151, 381, 457, 699, 781, 918, 1124, 1304, 1348
DinI	GGCGCC	1 cut(s)	205
DpnI	GATC	8 cut(s)	12, 32, 169, 696, 750, 815, 1119, 1263
DpnII	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
DrdI	GACNNNNNNGTC	1 cut(s)	188
DseDI	GACNNNNNNGTC	1 cut(s)	188
EaeI	YGGCCR	2 cut(s)	487, 888
Eam1104I	CTCTTC	1 cut(s)	531
EarI	CTCTTC	1 cut(s)	531
EciI	GGCGGA	1 cut(s)	100
Eco130I	CCWWGG	1 cut(s)	441
Eco147I	AGGCCT	1 cut(s)	1129
Eco24I	GRGCYC	1 cut(s)	1234
Eco31I	GGTCTC	1 cut(s)	154
Eco47I	GGWCC	1 cut(s)	1331
Eco81I	CCTNAGG	1 cut(s)	699
Eco88I	CYCGRG	1 cut(s)	1483
Eco91I	GGTNACC	1 cut(s)	1378
EcoNI	CCTNNNNNAGG	1 cut(s)	1238
EcoO109I	RGGNCCY	2 cut(s)	1230, 1231
EcoO65I	GGTNACC	1 cut(s)	1378
EcoRII	CCWGG	5 cut(s)	26, 319, 850, 1021, 1284
EcoT14I	CCWWGG	1 cut(s)	441
EcoT22I	ATGCAT	1 cut(s)	1048
EcoT38I	GRGCYC	1 cut(s)	1234
EgeI	GGCGCC	1 cut(s)	205
EheI	GGCGCC	1 cut(s)	205
ErhI	CCWWGG	1 cut(s)	441
Esp3I	CGTCTC	1 cut(s)	1576
FaeI	CATG	5 cut(s)	148, 761, 776, 1000, 1057
FaqI	GGGAC	2 cut(s)	363, 1344
FatI	CATG	5 cut(s)	144, 757, 772, 996, 1053
FauNDI	CATATG	1 cut(s)	634
FbaI	TGATCA	1 cut(s)	1261
FblI	GTMKAC	1 cut(s)	1417
Fnu4HI	GCNGC	7 cut(s)	133, 136, 139, 519, 954, 1005, 1427
FokI	GGATG	6 cut(s)	260, 517, 719, 1055, 1192, 1610
FriOI	GRGCYC	1 cut(s)	1234
Fsp4HI	GCNGC	7 cut(s)	133, 136, 139, 519, 954, 1005, 1427
FspBI	CTAG	1 cut(s)	1476
GlaI	GCGC	4 cut(s)	205, 683, 1058, 1283
GluI	GCNGC	7 cut(s)	133, 136, 139, 519, 954, 1005, 1427
GsaI	CCCAGC	1 cut(s)	350
GsuI	CTGGAG	4 cut(s)	134, 342, 758, 1044
HaeII	RGCGCY	2 cut(s)	207, 685
HaeIII	GGCC	5 cut(s)	26, 489, 890, 1129, 1232
HapII	CCGG	3 cut(s)	207, 216, 1114
HgaI	GACGC	1 cut(s)	164
HhaI	GCGC	4 cut(s)	206, 684, 1059, 1284
Hin1I	GRCGYC	3 cut(s)	189, 204, 253
Hin1II	CATG	5 cut(s)	148, 761, 776, 1000, 1057
Hin6I	GCGC	4 cut(s)	204, 682, 1057, 1282
HinP1I	GCGC	4 cut(s)	204, 682, 1057, 1282
HincII	GTYRAC	2 cut(s)	187, 1418
HindII	GTYRAC	2 cut(s)	187, 1418
HinfI	GANTC	5 cut(s)	733, 922, 1175, 1306, 1488
HpaII	CCGG	3 cut(s)	207, 216, 1114
HphI	GGTGA	3 cut(s)	317, 893, 1431
Hpy166II	GTNNAC	4 cut(s)	187, 308, 1137, 1418
Hpy188I	TCNGA	9 cut(s)	154, 242, 460, 732, 813, 921, 1099, 1305, 1313
Hpy188III	TCNNGA	7 cut(s)	620, 737, 976, 1172, 1259, 1350, 1485
Hpy8I	GTNNAC	4 cut(s)	187, 308, 1137, 1418
Hpy99I	CGWCG	3 cut(s)	82, 185, 203
HpyAV	CCTTC	6 cut(s)	723, 801, 876, 1267, 1508, 1588
HpyCH4III	ACNGT	8 cut(s)	73, 296, 312, 556, 746, 907, 1087, 1546
HpyCH4IV	ACGT	3 cut(s)	183, 189, 253
HpyF10VI	GCNNNNNNNGC	8 cut(s)	56, 138, 212, 221, 544, 690, 950, 1290
HpyF3I	CTNAG	9 cut(s)	151, 381, 457, 699, 781, 918, 1124, 1304, 1348
HpySE526I	ACGT	3 cut(s)	183, 189, 253
Hsp92I	GRCGYC	3 cut(s)	189, 204, 253
Hsp92II	CATG	5 cut(s)	148, 761, 776, 1000, 1057
HspAI	GCGC	4 cut(s)	204, 682, 1057, 1282
KasI	GGCGCC	1 cut(s)	203
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Ksp22I	TGATCA	1 cut(s)	1261
KspI	CCGCGG	1 cut(s)	136
Kzo9I	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
LmnI	GCTCC	6 cut(s)	474, 544, 919, 1012, 1025, 1116
Lsp1109I	GCAGC	3 cut(s)	125, 940, 1413
LweI	GCATC	6 cut(s)	367, 495, 931, 1033, 1138, 1214
MaeI	CTAG	1 cut(s)	1476
MaeII	ACGT	3 cut(s)	183, 189, 253
MaeIII	GTNAC	4 cut(s)	312, 556, 968, 1378
MalI	GATC	8 cut(s)	12, 32, 169, 696, 750, 815, 1119, 1263
MbiI	CCGCTC	1 cut(s)	1007
MboI	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
MboII	GAAGA	8 cut(s)	25, 368, 518, 584, 743, 913, 1112, 1245
MfeI	CAATTG	1 cut(s)	539
MflI	RGATCY	2 cut(s)	30, 1117
MhlI	GDGCHC	3 cut(s)	1113, 1139, 1234
MlsI	TGGCCA	1 cut(s)	890
MluCI	AATT	9 cut(s)	335, 339, 372, 449, 539, 585, 933, 1503, 1608
MluNI	TGGCCA	1 cut(s)	890
Mly113I	GGCGCC	1 cut(s)	204
MlyI	GAGTC	1 cut(s)	1315
Mox20I	TGGCCA	1 cut(s)	890
Mph1103I	ATGCAT	1 cut(s)	1048
MroNI	GCCGGC	1 cut(s)	215
MscI	TGGCCA	1 cut(s)	890
MseI	TTAA	3 cut(s)	338, 588, 1506
MslI	CAYNNNNRTG	3 cut(s)	59, 459, 771
Msp20I	TGGCCA	1 cut(s)	890
MspA1I	CMGCKG	1 cut(s)	135
MspI	CCGG	3 cut(s)	207, 216, 1114
MspR9I	CCNGG	6 cut(s)	28, 321, 852, 1023, 1115, 1286
MunI	CAATTG	1 cut(s)	539
Mva1269I	GAATGC	2 cut(s)	167, 1046
MvaI	CCWGG	5 cut(s)	28, 321, 852, 1023, 1286
MvnI	CGCG	2 cut(s)	135, 158
MwoI	GCNNNNNNNGC	8 cut(s)	56, 138, 212, 221, 544, 690, 950, 1290
NaeI	GCCGGC	1 cut(s)	217
NarI	GGCGCC	1 cut(s)	204
NciI	CCSGG	1 cut(s)	1115
NdeI	CATATG	1 cut(s)	634
NdeII	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
NgoMIV	GCCGGC	1 cut(s)	215
NlaIII	CATG	5 cut(s)	148, 761, 776, 1000, 1057
NlaIV	GGNNCC	7 cut(s)	205, 864, 915, 1231, 1232, 1332, 1462
NmeAIII	GCCGAG	2 cut(s)	128, 406
NsiI	ATGCAT	1 cut(s)	1048
NspI	RCATGY	4 cut(s)	761, 776, 1000, 1057
PaeI	GCATGC	1 cut(s)	1000
PceI	AGGCCT	1 cut(s)	1129
PcsI	WCGNNNNNNNCGW	3 cut(s)	77, 195, 259
PctI	GAATGC	2 cut(s)	167, 1046
PdiI	GCCGGC	1 cut(s)	217
PfeI	GAWTC	4 cut(s)	733, 922, 1175, 1488
PfoI	TCCNGGA	2 cut(s)	1021, 1113
PkrI	GCNGC	7 cut(s)	134, 137, 140, 520, 955, 1006, 1428
PleI	GAGTC	1 cut(s)	1314
PluTI	GGCGCC	1 cut(s)	207
PpsI	GAGTC	1 cut(s)	1314
PshBI	ATTAAT	1 cut(s)	338
PsiI	TTATAA	1 cut(s)	1239
Psp6I	CCWGG	5 cut(s)	26, 319, 850, 1021, 1284
PspEI	GGTNACC	1 cut(s)	1378
PspFI	CCCAGC	1 cut(s)	346
PspGI	CCWGG	5 cut(s)	26, 319, 850, 1021, 1284
PspN4I	GGNNCC	7 cut(s)	205, 864, 915, 1231, 1232, 1332, 1462
PspOMI	GGGCCC	1 cut(s)	1230
PspPI	GGNCC	3 cut(s)	1230, 1231, 1331
PstI	CTGCAG	1 cut(s)	958
PstNI	CAGNNNCTG	1 cut(s)	19
PsuI	RGATCY	2 cut(s)	30, 1117
RsaI	GTAC	4 cut(s)	17, 65, 823, 849
RsaNI	GTAC	4 cut(s)	16, 64, 822, 848
RseI	CAYNNNNRTG	3 cut(s)	59, 459, 771
SacII	CCGCGG	1 cut(s)	136
SalI	GTCGAC	1 cut(s)	1416
SaqAI	TTAA	3 cut(s)	338, 588, 1506
SatI	GCNGC	7 cut(s)	133, 136, 139, 519, 954, 1005, 1427
Sau3AI	GATC	8 cut(s)	10, 30, 167, 694, 748, 813, 1117, 1261
Sau96I	GGNCC	3 cut(s)	1230, 1231, 1331
SchI	GAGTC	1 cut(s)	1315
ScrFI	CCNGG	6 cut(s)	28, 321, 852, 1023, 1115, 1286
SduI	GDGCHC	3 cut(s)	1113, 1139, 1234
SfaNI	GCATC	6 cut(s)	367, 495, 931, 1033, 1138, 1214
SfcI	CTRYAG	1 cut(s)	954
SfoI	GGCGCC	1 cut(s)	205
Sfr303I	CCGCGG	1 cut(s)	136
SgrAI	CRCCGGYG	1 cut(s)	206
SgrBI	CCGCGG	1 cut(s)	136
SinI	GGWCC	1 cut(s)	1331
SmiMI	CAYNNNNRTG	3 cut(s)	59, 459, 771
SmlI	CTYRAG	3 cut(s)	676, 1369, 1573
SmoI	CTYRAG	3 cut(s)	676, 1369, 1573
SphI	GCATGC	1 cut(s)	1000
Sse9I	AATT	9 cut(s)	335, 339, 372, 449, 539, 585, 933, 1503, 1608
SseBI	AGGCCT	1 cut(s)	1129
SsiI	CCGC	8 cut(s)	85, 100, 133, 135, 158, 518, 1005, 1192
SspDI	GGCGCC	1 cut(s)	203
SspMI	CTAG	1 cut(s)	1476
StuI	AGGCCT	1 cut(s)	1129
StyD4I	CCNGG	6 cut(s)	26, 319, 850, 1021, 1113, 1284
StyI	CCWWGG	1 cut(s)	441
TaaI	ACNGT	8 cut(s)	73, 296, 312, 556, 746, 907, 1087, 1546
TaiI	ACGT	3 cut(s)	186, 192, 256
TaqI	TCGA	1 cut(s)	1417
TasI	AATT	9 cut(s)	335, 339, 372, 449, 539, 585, 933, 1503, 1608
TatI	WGTACW	1 cut(s)	821
TauI	GCSGC	4 cut(s)	135, 138, 521, 1007
TfiI	GAWTC	4 cut(s)	733, 922, 1175, 1488
Tru1I	TTAA	3 cut(s)	338, 588, 1506
Tru9I	TTAA	3 cut(s)	338, 588, 1506
TscAI	CASTG	2 cut(s)	1194, 1206
TseI	GCWGC	3 cut(s)	138, 953, 1426
TspDTI	ATGAA	2 cut(s)	484, 1239
TspGWI	ACGGA	1 cut(s)	31
TspRI	CASTG	2 cut(s)	1194, 1206
VneI	GTGCAC	1 cut(s)	1135
VpaK11BI	GGWCC	1 cut(s)	1331
VspI	ATTAAT	1 cut(s)	338
XagI	CCTNNNNNAGG	1 cut(s)	1238
XapI	RAATTY	2 cut(s)	449, 933
XceI	RCATGY	4 cut(s)	761, 776, 1000, 1057
XcmI	CCANNNNNNNNNTGG	3 cut(s)	538, 1067, 1219
XmiI	GTMKAC	1 cut(s)	1417
XspI	CTAG	1 cut(s)	1476
ZraI	GACGTC	2 cut(s)	190, 254
Zsp2I	ATGCAT	1 cut(s)	1048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.