Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0010638

Physical Location & Seq

Genomic Coordinates Reverse (-)

4435407 .. 4440080

Gene Structure 4674 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1064100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGCGGATCAGTACTTGCTCGGATGGATCTTCGCCACCGTGCTGGGCGTCGTGTTTCTTTACAGAGCGCTGGCGAAGAGGAGCGACGAGAAAGGGAGAGGTTTGGTGGAGGAGGAGAATAGGAGCGAGTGCGTGAAGAGCGTGATGGTCTCCAACGGAGAATGCAGATCCACTGACGGCGACGTCGACGTCATCATCGTCGGTGCGGGTGTCGCCGGCGCCGCTCTCGCTCACACTCTCGGCAAGGATGGACGTCGGGTGCATGTGATTGAACGAGACTTGACAGAGCCAGACCGAATTGTTGGTGAATTACTACAACCTGGAGGCTACCTTAAATTAATTGAGCTGGGACTTGAAGATTGTGTGGAGCAAATTGATGCTCAGCGGGTTTTTGGATATGCTCTTTTCAAGGATGGGAAAAATACTAGATTGTCTTATCCCTTGGAGAAATTTCACTCAGATGTGTCTGGGAGGAGCTTTCACAATGGCCGTTTCATACAGAGAATGAGGGAGAAGGCTGCAACTCTTCCCAATGTGCGATTGGAGCAAGGAACGGTTACTTCACTGCTTGAAGAAAAGGGAACAATTAAAGGTGTGCAATACAAGACTAAAACTGGCGAAGAGATGACCGCATATGCACCTCTTACTGTTGTTTGTGATGGCTGTTTCTCCAACTTGCGTCGCACTCTTTGTGATCCTAAGGTGGATGTGCCTTCTTGTTTTGTTGGGTTGGTTCTGGAGAATTGCAATCTTCCACATGCTAATCACGGACATGTTATATTAGCAGACCCTTCTCCTATTTTGTTCTATAAAATCAGTAGCACAGAGGTTCGCTGTCTGGTTGATGTACCTGGACAAAAAGTTCCCTCCATTTCAAATGGTGAAATGGCAAAGTATTTGAAGACTGTGGTGGCTCCTCAGATTCCCCCTCAAATTTATGATTCCTTCGTAGCTGCAGTGGATAAGGGTACCATAAGGACAATGCCAAATAGAAGCATGCCCGCCGCTCCCTACCCAACTCCTGGAGCTCTATTGATGGGGGATGCATTCAACATGCGCCACCCTCTGACGGGCGGAGGAATGACTGTGGCCTTGTCTGATATTGTTGTGCTGCGGAATCTTCTTAAGCCTTTGGGCAACCTAAATGATCCATCTACACTGTCCAAATATCTGGAATCCTTCTACACTCTTCGCAAGCCAGTGGCATCCACAATAAATACATTGGCGGGTGCCCTTTACAAGGTCTTTTCTTCTTCACCTGATCAAGCAAGGAAGGAAATGCGCCAGGCTTGCTTTGACTATCTAAGTCTCGGAGGTGTATTCTCTACAGGACCAGTCTCTCTGCTTTCGGGGTTGAACCCTCGCCCCTTGAGTTTGGTTCTCCATTTCTTTGCCGTTGCAGTGTATGGTGTTGGTCGTCTGTTGCTGCCATTTCCATCACCTAAACGCGCCTGGATTGGAGCCAGATTAATTTCTAGTGCCTCAGGAATCATATTCCCCATAATCAAGGCGGAAGGAGTTAGACAAATGTTTTTCCCCGCAACTGTTCCGGCATATTACAGAGCACCCGTCTCAAGCGAGAAGCAGCTGAAAAAGACTGAAGGTTGCGTAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006629 GO:0006694 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0012505 GO:0016125 GO:0016126 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Protein Analysis

539

Amino Acids

58.65

Weight (kDa)

8.95

Isoelectric Point (pI)

41.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	61 - 390	5.4e-20	FAD binding domain
SE	PF08491	213 - 481	9.8e-120	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58440
fragaria_vesca	FvH4_2g32500 FvH4_2g32500 FvH4_2g32500
malus_domestica	MD08G1076800.v1.1 MD15G1064100.v1.1
prunus_persica	Prupe.1G418100_v2.0.a1 Prupe.1G418100_v2.0.a1
pyrus_communis	pycom08g06360 pycom15g06080
rosa_chinensis	RchiOBHm_Chr6g0310151
rosa_laevigata	RLG00000010504
rosa_multiflora	Rmu_sc0008163.1_g000004
rosa_roxburghii	Rroxscaffold_7G00158810
rosa_rugosa	Rorug06G0377700 Rorug06G0377800
rosa_samantha	Rh6AG491900 Rh6BG501500 Rh6CG506600
rosa_wichuraiana	Rw6G042800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	182, 188
AatII	GACGTC	3 cut(s)	186, 192, 256
Acc65I	GGTACC	1 cut(s)	968
AccB1I	GGYRCC	3 cut(s)	218, 968, 1229
AccB7I	CCANNNNNTGG	1 cut(s)	1022
AccBSI	CCGCTC	2 cut(s)	224, 1007
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	1 cut(s)	1449
AclWI	GGATC	5 cut(s)	15, 35, 162, 689, 1142
AcoI	YGGCCR	1 cut(s)	487
AcsI	RAATTY	2 cut(s)	449, 933
AcyI	GRCGYC	5 cut(s)	48, 183, 189, 219, 253
AfaI	GTAC	3 cut(s)	14, 849, 970
AfeI	AGCGCT	1 cut(s)	69
AfiI	CCNNNNNNNGG	4 cut(s)	1022, 1069, 1070, 1240
AflII	CTTAAG	1 cut(s)	1124
AflIII	ACRYGT	1 cut(s)	772
AgsI	TTSAA	8 cut(s)	272, 356, 409, 572, 876, 901, 1051, 1357
AjnI	CCWGG	5 cut(s)	319, 850, 1021, 1284, 1451
AloI	GAACNNNNNNTCC	2 cut(s)	846, 878
AluBI	AGCT	6 cut(s)	346, 477, 953, 1028, 1588, 1614
AluI	AGCT	6 cut(s)	346, 477, 953, 1028, 1588, 1614
Alw21I	GWGCWC	2 cut(s)	1030, 1567
Alw26I	GTCTC	5 cut(s)	154, 270, 1313, 1342, 1576
AlwI	GGATC	5 cut(s)	15, 35, 162, 689, 1142
Aor51HI	AGCGCT	1 cut(s)	69
AoxI	GGCC	2 cut(s)	487, 1089
ApeKI	GCWGC	5 cut(s)	518, 953, 1111, 1426, 1585
ApoI	RAATTY	2 cut(s)	449, 933
AseI	ATTAAT	2 cut(s)	338, 1469
Asp718I	GGTACC	1 cut(s)	968
AspLEI	GCGC	5 cut(s)	70, 221, 1059, 1284, 1451
AspS9I	GGNCC	1 cut(s)	1331
AsuHPI	GGTGA	4 cut(s)	317, 893, 1248, 1431
AvaII	GGWCC	1 cut(s)	1331
AxyI	CCTNAGG	2 cut(s)	699, 1483
BaeGI	GKGCMC	1 cut(s)	1234
BanI	GGYRCC	3 cut(s)	218, 968, 1229
BanII	GRGCYC	1 cut(s)	1030
BbsI	GAAGAC	1 cut(s)	908
Bbv12I	GWGCWC	2 cut(s)	1030, 1567
BbvI	GCAGC	5 cut(s)	505, 940, 1098, 1413, 1597
BccI	CCATC	8 cut(s)	18, 139, 242, 407, 653, 1030, 1159, 1444
BceAI	ACGGC	3 cut(s)	193, 474, 1379
BciT130I	CCWGG	5 cut(s)	321, 852, 1023, 1286, 1453
BclI	TGATCA	1 cut(s)	1261
BcoDI	GTCTC	5 cut(s)	154, 270, 1313, 1342, 1576
BfaI	CTAG	2 cut(s)	426, 1476
BfmI	CTRYAG	2 cut(s)	954, 1326
BfoI	RGCGCY	2 cut(s)	71, 222
BfrI	CTTAAG	1 cut(s)	1124
BisI	GCNGC	7 cut(s)	222, 519, 954, 1005, 1112, 1427, 1586
BlpI	GCTNAGC	1 cut(s)	381
BlsI	GCNGC	7 cut(s)	223, 520, 955, 1006, 1113, 1428, 1587
BmcAI	AGTACT	1 cut(s)	14
Bme1390I	CCNGG	5 cut(s)	321, 852, 1023, 1286, 1453
Bme18I	GGWCC	1 cut(s)	1331
BmgT120I	GGNCC	1 cut(s)	1331
BmiI	GGNNCC	5 cut(s)	220, 915, 970, 1231, 1462
BmrFI	CCNGG	5 cut(s)	321, 852, 1023, 1286, 1453
BmsI	GCATC	3 cut(s)	367, 1033, 1214
BpiI	GAAGAC	1 cut(s)	908
BpmI	CTGGAG	3 cut(s)	342, 758, 1044
Bpu1102I	GCTNAGC	1 cut(s)	381
BpuEI	CTTGAG	2 cut(s)	1390, 1558
BsaHI	GRCGYC	5 cut(s)	48, 183, 189, 219, 253
BsaI	GGTCTC	1 cut(s)	154
BsaJI	CCNNGG	1 cut(s)	441
Bsc4I	CCNNNNNNNGG	4 cut(s)	1022, 1069, 1070, 1240
Bse118I	RCCGGY	1 cut(s)	215
Bse1I	ACTGG	3 cut(s)	619, 1199, 1334
Bse21I	CCTNAGG	2 cut(s)	699, 1483
BseBI	CCWGG	5 cut(s)	321, 852, 1023, 1286, 1453
BseDI	CCNNGG	1 cut(s)	441
BseGI	GGATG	6 cut(s)	29, 253, 418, 712, 1048, 1205
BseLI	CCNNNNNNNGG	4 cut(s)	1022, 1069, 1070, 1240
BseMII	CTCAG	4 cut(s)	395, 471, 932, 1497
BseNI	ACTGG	3 cut(s)	619, 1199, 1334
BseRI	GAGGAG	5 cut(s)	94, 125, 128, 487, 906
BseSI	GKGCMC	1 cut(s)	1234
BseXI	GCAGC	5 cut(s)	505, 940, 1098, 1413, 1597
BseYI	CCCAGC	2 cut(s)	43, 346
Bsh1236I	CGCG	1 cut(s)	1449
BshFI	GGCC	2 cut(s)	489, 1091
BshNI	GGYRCC	3 cut(s)	218, 968, 1229
BsiHKAI	GWGCWC	2 cut(s)	1030, 1567
BsiSI	CCGG	2 cut(s)	216, 1550
BslFI	GGGAC	1 cut(s)	363
BslI	CCNNNNNNNGG	4 cut(s)	1022, 1069, 1070, 1240
BsmAI	GTCTC	5 cut(s)	154, 270, 1313, 1342, 1576
BsmBI	CGTCTC	1 cut(s)	1576
BsmFI	GGGAC	1 cut(s)	363
BsmI	GAATGC	2 cut(s)	167, 1046
BsnI	GGCC	2 cut(s)	489, 1091
Bso31I	GGTCTC	1 cut(s)	154
Bsp1286I	GDGCHC	3 cut(s)	1030, 1234, 1567
Bsp143I	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
Bsp1720I	GCTNAGC	1 cut(s)	381
BspANI	GGCC	2 cut(s)	489, 1091
BspCNI	CTCAG	4 cut(s)	394, 470, 931, 1496
BspFNI	CGCG	1 cut(s)	1449
BspLI	GGNNCC	5 cut(s)	220, 915, 970, 1231, 1462
BspMAI	CTGCAG	1 cut(s)	958
BspPI	GGATC	5 cut(s)	15, 35, 162, 689, 1142
BspQI	GCTCTTC	1 cut(s)	131
BspT107I	GGYRCC	3 cut(s)	218, 968, 1229
BspTI	CTTAAG	1 cut(s)	1124
BspTNI	GGTCTC	1 cut(s)	154
BsrBI	CCGCTC	2 cut(s)	224, 1007
BsrFI	RCCGGY	1 cut(s)	215
BsrI	ACTGG	3 cut(s)	619, 1199, 1334
BssAI	RCCGGY	1 cut(s)	215
BssECI	CCNNGG	1 cut(s)	441
BssMI	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
BssNI	GRCGYC	5 cut(s)	48, 183, 189, 219, 253
BssT1I	CCWWGG	1 cut(s)	441
Bst2UI	CCWGG	5 cut(s)	321, 852, 1023, 1286, 1453
Bst4CI	ACNGT	7 cut(s)	40, 556, 649, 907, 1087, 1161, 1546
Bst6I	CTCTTC	5 cut(s)	71, 131, 531, 615, 1194
BstACI	GRCGYC	5 cut(s)	48, 183, 189, 219, 253
BstAFI	CTTAAG	1 cut(s)	1124
BstC8I	GCNNGC	6 cut(s)	72, 217, 998, 1002, 1196, 1291
BstDEI	CTNAG	6 cut(s)	381, 457, 699, 918, 1304, 1483
BstENI	CCTNNNNNAGG	1 cut(s)	1238
BstF5I	GGATG	6 cut(s)	29, 253, 418, 712, 1048, 1205
BstFNI	CGCG	1 cut(s)	1449
BstH2I	RGCGCY	2 cut(s)	71, 222
BstHHI	GCGC	5 cut(s)	70, 221, 1059, 1284, 1451
BstKTI	GATC	6 cut(s)	10, 30, 170, 697, 1150, 1264
BstMAI	GTCTC	5 cut(s)	154, 270, 1313, 1342, 1576
BstMBI	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
BstMWI	GCNNNNNNNGC	6 cut(s)	138, 212, 221, 227, 544, 1290
BstNI	CCWGG	5 cut(s)	321, 852, 1023, 1286, 1453
BstNSI	RCATGY	5 cut(s)	266, 761, 776, 1000, 1057
BstSCI	CCNGG	5 cut(s)	319, 850, 1021, 1284, 1451
BstSFI	CTRYAG	2 cut(s)	954, 1326
BstSLI	GKGCMC	1 cut(s)	1234
BstUI	CGCG	1 cut(s)	1449
BstV1I	GCAGC	5 cut(s)	505, 940, 1098, 1413, 1597
BstV2I	GAAGAC	1 cut(s)	908
BstX2I	RGATCY	2 cut(s)	27, 167
BstXI	CCANNNNNNTGG	2 cut(s)	43, 1171
BstYI	RGATCY	2 cut(s)	27, 167
Bsu36I	CCTNAGG	2 cut(s)	699, 1483
BsuRI	GGCC	2 cut(s)	489, 1091
BtsCI	GGATG	6 cut(s)	29, 253, 418, 712, 1048, 1205
BtsI	GCAGTG	3 cut(s)	563, 963, 1407
BtsIMutI	CAGTG	6 cut(s)	171, 563, 963, 1157, 1206, 1407
Cac8I	GCNNGC	6 cut(s)	72, 217, 998, 1002, 1196, 1291
CfoI	GCGC	5 cut(s)	70, 221, 1059, 1284, 1451
Cfr10I	RCCGGY	1 cut(s)	215
Cfr13I	GGNCC	1 cut(s)	1331
CseI	GACGC	2 cut(s)	37, 668
Csp6I	GTAC	3 cut(s)	13, 848, 969
CviAII	CATG	5 cut(s)	263, 758, 773, 997, 1054
CviQI	GTAC	3 cut(s)	13, 848, 969
DdeI	CTNAG	6 cut(s)	381, 457, 699, 918, 1304, 1483
DinI	GGCGCC	1 cut(s)	220
DpnI	GATC	6 cut(s)	9, 29, 169, 696, 1149, 1263
DpnII	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
DrdI	GACNNNNNNGTC	2 cut(s)	182, 188
DseDI	GACNNNNNNGTC	2 cut(s)	182, 188
EaeI	YGGCCR	1 cut(s)	487
Eam1104I	CTCTTC	5 cut(s)	71, 131, 531, 615, 1194
EarI	CTCTTC	5 cut(s)	71, 131, 531, 615, 1194
EciI	GGCGGA	3 cut(s)	20, 1089, 1526
Ecl136II	GAGCTC	1 cut(s)	1028
Eco130I	CCWWGG	1 cut(s)	441
Eco24I	GRGCYC	1 cut(s)	1030
Eco31I	GGTCTC	1 cut(s)	154
Eco47I	GGWCC	1 cut(s)	1331
Eco47III	AGCGCT	1 cut(s)	69
Eco53kI	GAGCTC	1 cut(s)	1028
Eco81I	CCTNAGG	2 cut(s)	699, 1483
EcoICRI	GAGCTC	1 cut(s)	1028
EcoNI	CCTNNNNNAGG	1 cut(s)	1238
EcoRII	CCWGG	5 cut(s)	319, 850, 1021, 1284, 1451
EcoT14I	CCWWGG	1 cut(s)	441
EcoT22I	ATGCAT	1 cut(s)	1048
EcoT38I	GRGCYC	1 cut(s)	1030
EgeI	GGCGCC	1 cut(s)	220
EheI	GGCGCC	1 cut(s)	220
ErhI	CCWWGG	1 cut(s)	441
Esp3I	CGTCTC	1 cut(s)	1576
FaeI	CATG	5 cut(s)	266, 761, 776, 1000, 1057
FaqI	GGGAC	1 cut(s)	363
FatI	CATG	5 cut(s)	262, 757, 772, 996, 1053
FauI	CCCGC	5 cut(s)	199, 378, 1009, 1219, 1546
FauNDI	CATATG	1 cut(s)	634
FbaI	TGATCA	1 cut(s)	1261
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	7 cut(s)	222, 519, 954, 1005, 1112, 1427, 1586
FokI	GGATG	6 cut(s)	36, 260, 425, 719, 1055, 1192
FriOI	GRGCYC	1 cut(s)	1030
Fsp4HI	GCNGC	7 cut(s)	222, 519, 954, 1005, 1112, 1427, 1586
FspBI	CTAG	2 cut(s)	426, 1476
GlaI	GCGC	5 cut(s)	69, 220, 1058, 1283, 1450
GluI	GCNGC	7 cut(s)	222, 519, 954, 1005, 1112, 1427, 1586
GsaI	CCCAGC	2 cut(s)	47, 350
GsuI	CTGGAG	3 cut(s)	342, 758, 1044
HaeII	RGCGCY	2 cut(s)	71, 222
HaeIII	GGCC	2 cut(s)	489, 1091
HapII	CCGG	2 cut(s)	216, 1550
HgaI	GACGC	2 cut(s)	37, 668
HhaI	GCGC	5 cut(s)	70, 221, 1059, 1284, 1451
Hin1I	GRCGYC	5 cut(s)	48, 183, 189, 219, 253
Hin1II	CATG	5 cut(s)	266, 761, 776, 1000, 1057
Hin6I	GCGC	5 cut(s)	68, 219, 1057, 1282, 1449
HinP1I	GCGC	5 cut(s)	68, 219, 1057, 1282, 1449
HincII	GTYRAC	1 cut(s)	187
HindII	GTYRAC	1 cut(s)	187
HinfI	GANTC	5 cut(s)	922, 941, 1117, 1175, 1488
HpaII	CCGG	2 cut(s)	216, 1550
HphI	GGTGA	4 cut(s)	317, 893, 1248, 1431
Hpy166II	GTNNAC	1 cut(s)	187
Hpy188I	TCNGA	6 cut(s)	23, 460, 921, 1068, 1099, 1313
Hpy188III	TCNNGA	3 cut(s)	737, 1172, 1485
Hpy8I	GTNNAC	1 cut(s)	187
Hpy99I	CGWCG	8 cut(s)	53, 89, 185, 188, 191, 203, 258, 684
HpyAV	CCTTC	8 cut(s)	508, 723, 801, 955, 1189, 1267, 1508, 1595
HpyCH4III	ACNGT	7 cut(s)	40, 556, 649, 907, 1087, 1161, 1546
HpyCH4IV	ACGT	3 cut(s)	183, 189, 253
HpyCH4V	TGCA	9 cut(s)	165, 262, 521, 598, 638, 747, 956, 1046, 1400
HpyF10VI	GCNNNNNNNGC	6 cut(s)	138, 212, 221, 227, 544, 1290
HpyF3I	CTNAG	6 cut(s)	381, 457, 699, 918, 1304, 1483
HpySE526I	ACGT	3 cut(s)	183, 189, 253
Hsp92I	GRCGYC	5 cut(s)	48, 183, 189, 219, 253
Hsp92II	CATG	5 cut(s)	266, 761, 776, 1000, 1057
HspAI	GCGC	5 cut(s)	68, 219, 1057, 1282, 1449
KasI	GGCGCC	1 cut(s)	218
KpnI	GGTACC	1 cut(s)	972
KroI	GCCGGC	1 cut(s)	215
KroNI	GCCGGC	1 cut(s)	217
Ksp22I	TGATCA	1 cut(s)	1261
Kzo9I	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
LguI	GCTCTTC	1 cut(s)	131
LmnI	GCTCC	9 cut(s)	81, 123, 367, 474, 544, 919, 1012, 1025, 1460
Lsp1109I	GCAGC	5 cut(s)	505, 940, 1098, 1413, 1597
LweI	GCATC	3 cut(s)	367, 1033, 1214
MaeI	CTAG	2 cut(s)	426, 1476
MaeII	ACGT	3 cut(s)	183, 189, 253
MaeIII	GTNAC	1 cut(s)	556
MalI	GATC	6 cut(s)	9, 29, 169, 696, 1149, 1263
MbiI	CCGCTC	2 cut(s)	224, 1007
MboI	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
MflI	RGATCY	2 cut(s)	27, 167
MhlI	GDGCHC	3 cut(s)	1030, 1234, 1567
Mly113I	GGCGCC	1 cut(s)	219
MmeI	TCCRAC	2 cut(s)	177, 696
Mph1103I	ATGCAT	1 cut(s)	1048
MreI	CGCCGGCG	1 cut(s)	215
MroNI	GCCGGC	1 cut(s)	215
MseI	TTAA	5 cut(s)	333, 338, 588, 1125, 1469
MslI	CAYNNNNRTG	2 cut(s)	459, 771
MspA1I	CMGCKG	2 cut(s)	385, 1588
MspCI	CTTAAG	1 cut(s)	1124
MspI	CCGG	2 cut(s)	216, 1550
MspR9I	CCNGG	5 cut(s)	321, 852, 1023, 1286, 1453
Mva1269I	GAATGC	2 cut(s)	167, 1046
MvaI	CCWGG	5 cut(s)	321, 852, 1023, 1286, 1453
MvnI	CGCG	1 cut(s)	1449
MwoI	GCNNNNNNNGC	6 cut(s)	138, 212, 221, 227, 544, 1290
NaeI	GCCGGC	1 cut(s)	217
NarI	GGCGCC	1 cut(s)	219
NdeI	CATATG	1 cut(s)	634
NdeII	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
NgoMIV	GCCGGC	1 cut(s)	215
NlaIII	CATG	5 cut(s)	266, 761, 776, 1000, 1057
NlaIV	GGNNCC	5 cut(s)	220, 915, 970, 1231, 1462
NmeAIII	GCCGAG	1 cut(s)	219
NsiI	ATGCAT	1 cut(s)	1048
NspI	RCATGY	5 cut(s)	266, 761, 776, 1000, 1057
PaeI	GCATGC	1 cut(s)	1000
PciI	ACATGT	1 cut(s)	772
PciSI	GCTCTTC	1 cut(s)	131
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 195
PctI	GAATGC	2 cut(s)	167, 1046
PdiI	GCCGGC	1 cut(s)	217
PfeI	GAWTC	5 cut(s)	922, 941, 1117, 1175, 1488
PflMI	CCANNNNNTGG	1 cut(s)	1022
PfoI	TCCNGGA	1 cut(s)	1021
PkrI	GCNGC	7 cut(s)	223, 520, 955, 1006, 1113, 1428, 1587
PluTI	GGCGCC	1 cut(s)	222
PscI	ACATGT	1 cut(s)	772
PshBI	ATTAAT	2 cut(s)	338, 1469
Psp124BI	GAGCTC	1 cut(s)	1030
Psp6I	CCWGG	5 cut(s)	319, 850, 1021, 1284, 1451
PspFI	CCCAGC	2 cut(s)	43, 346
PspGI	CCWGG	5 cut(s)	319, 850, 1021, 1284, 1451
PspN4I	GGNNCC	5 cut(s)	220, 915, 970, 1231, 1462
PspPI	GGNCC	1 cut(s)	1331
PstI	CTGCAG	1 cut(s)	958
PsuI	RGATCY	2 cut(s)	27, 167
PvuII	CAGCTG	1 cut(s)	1588
RsaI	GTAC	3 cut(s)	14, 849, 970
RsaNI	GTAC	3 cut(s)	13, 848, 969
RseI	CAYNNNNRTG	2 cut(s)	459, 771
SacI	GAGCTC	1 cut(s)	1030
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	1 cut(s)	131
SaqAI	TTAA	5 cut(s)	333, 338, 588, 1125, 1469
SatI	GCNGC	7 cut(s)	222, 519, 954, 1005, 1112, 1427, 1586
Sau3AI	GATC	6 cut(s)	7, 27, 167, 694, 1147, 1261
Sau96I	GGNCC	1 cut(s)	1331
ScaI	AGTACT	1 cut(s)	14
ScrFI	CCNGG	5 cut(s)	321, 852, 1023, 1286, 1453
SduI	GDGCHC	3 cut(s)	1030, 1234, 1567
SfaNI	GCATC	3 cut(s)	367, 1033, 1214
SfcI	CTRYAG	2 cut(s)	954, 1326
SfoI	GGCGCC	1 cut(s)	220
SgrAI	CRCCGGYG	1 cut(s)	215
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	1 cut(s)	1331
SmiMI	CAYNNNNRTG	2 cut(s)	459, 771
SmlI	CTYRAG	3 cut(s)	1124, 1369, 1573
SmoI	CTYRAG	3 cut(s)	1124, 1369, 1573
SphI	GCATGC	1 cut(s)	1000
SspDI	GGCGCC	1 cut(s)	218
SspMI	CTAG	2 cut(s)	426, 1476
SstI	GAGCTC	1 cut(s)	1030
StyD4I	CCNGG	5 cut(s)	319, 850, 1021, 1284, 1451
StyI	CCWWGG	1 cut(s)	441
TaaI	ACNGT	7 cut(s)	40, 556, 649, 907, 1087, 1161, 1546
TaiI	ACGT	3 cut(s)	186, 192, 256
TaqI	TCGA	1 cut(s)	186
TaqII	GACCGA	1 cut(s)	309
TatI	WGTACW	1 cut(s)	12
TauI	GCSGC	2 cut(s)	224, 1007
TfiI	GAWTC	5 cut(s)	922, 941, 1117, 1175, 1488
Tru1I	TTAA	5 cut(s)	333, 338, 588, 1125, 1469
Tru9I	TTAA	5 cut(s)	333, 338, 588, 1125, 1469
TscAI	CASTG	6 cut(s)	178, 570, 963, 1164, 1206, 1407
TseI	GCWGC	5 cut(s)	518, 953, 1111, 1426, 1585
TspDTI	ATGAA	1 cut(s)	484
TspGWI	ACGGA	2 cut(s)	171, 783
TspRI	CASTG	6 cut(s)	178, 570, 963, 1164, 1206, 1407
Van91I	CCANNNNNTGG	1 cut(s)	1022
Vha464I	CTTAAG	1 cut(s)	1124
VpaK11BI	GGWCC	1 cut(s)	1331
VspI	ATTAAT	2 cut(s)	338, 1469
XagI	CCTNNNNNAGG	1 cut(s)	1238
XapI	RAATTY	2 cut(s)	449, 933
XceI	RCATGY	5 cut(s)	266, 761, 776, 1000, 1057
XcmI	CCANNNNNNNNNTGG	1 cut(s)	538
XmiI	GTMKAC	1 cut(s)	186
XspI	CTAG	2 cut(s)	426, 1476
ZraI	GACGTC	3 cut(s)	184, 190, 254
ZrmI	AGTACT	1 cut(s)	14
Zsp2I	ATGCAT	1 cut(s)	1048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.