Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0010638

Physical Location & Seq

Genomic Coordinates Forward (+)

66782389 .. 66786214

Gene Structure 3826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG506600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGGCGGTGGTGCAGTACCTGTTGGCCTGGATCTTCGCCTCCGTGTTAGGTCTCATAGCGGTGGTGAAGAGGCGGAGCAACAATCCCCGAGCTTCGCCGGAGGAGACAAGAAGCAGTGTCACCGTCTCAAACGCGGAATGCAGATCGGCTCACGACGACGTAGACGTCATCATCGTCGGAGCCGGTGTTGCCGGCTCTGCTCTGGCTCACACTCTCGGAAAGGATGGACGTCGAGTGCATGTGATTGAACGAGACTTGACAGAGCCAGACCGAATTGTTGGTGAACTATTACAACCTGGAGGCTACCTCAAATTAATTGAGCTGGGACTTGAAGGTAGTCTCATTCTCAACTTTCTAACCATGTGGCCGTATTGTGTGGAAAAAATTGATGCTCAGAGGGTGTTTGGTTATGCCCTTTTCAAGGATGGGAAAAATACTAGACTCTCTTACCCCTTGGAGAAATTTCACTCAGATGTGTCTGGGAGGAGCTTTCACAATGGCCGTTTCATACAGAGGATGCGAGAGAAAGCGGCAACTCTTCCCAATGTGCAATTGGAGCAAGGAACAGTTACTTCTCTGCTTGAAGAAAAGGGAACAATTAAAGGTGTGCAATACAAGACTAAAACAGGTCAAGAGATGACAGCATATGCACCTCTTACTATTGTTTGTGATGGCTGTTTCTCTAACTTGCGACGCTCTCTTTGCGATCCTAAGGTGGATGTGCCTTCTTGTTTTGTTGGGTTGGTTCTGGAGAACTGTGATCTTCCACATGCAAATCATGGGCATGTTATCTTAGCAGACCCTTCCCCTATTTTGTTCTATCAGATCAGTAGTACGGAGGTTCGTTGTCTGGTTGATGTACCTGGACAAAAGGTTCCTTCCATTTCAAATGGTGAAATGGCCAAGTATTTGAAGACTGTGGTGGCTTCTCAGATTCCCCCTCAAATTTATGATTCCTTCATAGCTGCAGTTGATAAAGGTAACATCAGGACAATGCCTAACAGAAGCATGCCTGCCGCTCCCTATCCTACTCCTGGAGCCTTATTGATGGGGGATGCATTCAATATGCGCCACCCTCTAACTGGGGGAGGAATGACTGTGGCATTGTCTGATATTGTTGTGCTCCGGGATCTTCTCAGGCCTTTGCGCACCCTAAATGATGCACCTACCCTGTCCAAATATCTTGAATCTTTTTACACTCTGCGGAAGCCAGTGGCATCCACCATAAATACATTGGCAGGGGCCCTTTATAAGGTCTTTTCTTCTTCTCCTGATCAAGCAAGGAAGGAAATGCGCCAGGCTTGCTTTGATTATCTAAGTCTCGGAGGTGTATTCTCTATGGGACCAATCTCTCTACTCTCAGGACTAAACCCTCGCCCCTTGAGTTTGGTTACCCATTTCTTTGCTGTTGCAGTATATGGTGTTGGTCGACTTTTGCTGCCATTCCCATCACCTAAACGCGTTTGGATTGGTGCCAGACTAATTTCTAGTGCCTCGGGAATCATTTACCCCATAATTAAGGCAGAAGGGGTTAGACAAATGTTTTTTCCTGCAACAGTTCCAGCGTATTACAGAACGCCCGTCTCAAGTGAAAAGATGACAAAGAAAGCTGATGGCAGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006629 GO:0006694 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0009414 GO:0009415 GO:0009628 GO:0010035 GO:0012505 GO:0016125 GO:0016126 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00100 ko00909 ko01100 ko01110 ko01130 map00100 map00909 map01100 map01110 map01130

Pfam Domains

Protein Families

Protein Analysis

541

Amino Acids

59.22

Weight (kDa)

9.27

Isoelectric Point (pI)

44.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_3	PF01494	171 - 379	2.4e-10	FAD binding domain
SE	PF08491	217 - 489	2.7e-119	Squalene epoxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58440
fragaria_vesca	FvH4_2g32500 FvH4_2g32500 FvH4_2g32500
malus_domestica	MD08G1076800.v1.1 MD15G1064100.v1.1
prunus_persica	Prupe.1G418100_v2.0.a1 Prupe.1G418100_v2.0.a1
pyrus_communis	pycom08g06360 pycom15g06080
rosa_chinensis	RchiOBHm_Chr6g0310151
rosa_laevigata	RLG00000010504
rosa_multiflora	Rmu_sc0008163.1_g000004
rosa_roxburghii	Rroxscaffold_7G00158810
rosa_rugosa	Rorug06G0377700 Rorug06G0377800
rosa_samantha	Rh6AG491900 Rh6BG501500 Rh6CG506600
rosa_wichuraiana	Rw6G042800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1251
AasI	GACNNNNNNGTC	1 cut(s)	164
AatII	GACGTC	2 cut(s)	168, 232
Acc16I	TGCGCA	1 cut(s)	1148
AccB1I	GGYRCC	1 cut(s)	1472
AccBSI	CCGCTC	1 cut(s)	1019
AccI	GTMKAC	2 cut(s)	162, 1429
AccII	CGCG	2 cut(s)	134, 1461
AciI	CCGC	7 cut(s)	5, 59, 73, 134, 530, 1017, 1204
AclWI	GGATC	3 cut(s)	38, 701, 1137
AcoI	YGGCCR	3 cut(s)	365, 499, 900
AcsI	RAATTY	2 cut(s)	461, 945
AcyI	GRCGYC	2 cut(s)	165, 229
AfaI	GTAC	3 cut(s)	17, 835, 861
AfiI	CCNNNNNNNGG	4 cut(s)	421, 1034, 1082, 1252
AflIII	ACRYGT	1 cut(s)	1459
AgsI	TTSAA	8 cut(s)	248, 332, 421, 584, 888, 913, 1063, 1187
AjnI	CCWGG	5 cut(s)	26, 295, 862, 1033, 1296
AloI	GAACNNNNNNTCC	2 cut(s)	858, 890
AluBI	AGCT	5 cut(s)	92, 322, 489, 965, 1610
AluI	AGCT	5 cut(s)	92, 322, 489, 965, 1610
Alw21I	GWGCWC	1 cut(s)	1125
Alw26I	GTCTC	7 cut(s)	56, 98, 130, 246, 344, 1325, 1588
AlwI	GGATC	3 cut(s)	38, 701, 1137
AlwNI	CAGNNNCTG	1 cut(s)	19
Ama87I	CYCGRG	2 cut(s)	87, 1495
AoxI	GGCC	6 cut(s)	24, 365, 499, 900, 1139, 1242
ApaI	GGGCCC	1 cut(s)	1246
ApeKI	GCWGC	2 cut(s)	965, 1438
ApoI	RAATTY	2 cut(s)	461, 945
ArsI	GACNNNNNNTTYG	2 cut(s)	684, 716
AseI	ATTAAT	1 cut(s)	314
AspLEI	GCGC	3 cut(s)	1071, 1149, 1296
AspS9I	GGNCC	3 cut(s)	1242, 1243, 1343
AsuC2I	CCSGG	1 cut(s)	1127
AsuHPI	GGTGA	5 cut(s)	76, 112, 293, 905, 1443
AvaI	CYCGRG	2 cut(s)	87, 1495
AvaII	GGWCC	1 cut(s)	1343
AxyI	CCTNAGG	1 cut(s)	711
BaeGI	GKGCMC	1 cut(s)	1246
BalI	TGGCCA	1 cut(s)	902
BanI	GGYRCC	1 cut(s)	1472
BanII	GRGCYC	1 cut(s)	1246
BbsI	GAAGAC	1 cut(s)	920
Bbv12I	GWGCWC	1 cut(s)	1125
BbvI	GCAGC	2 cut(s)	952, 1425
BccI	CCATC	6 cut(s)	218, 419, 665, 1042, 1456, 1607
BceAI	ACGGC	2 cut(s)	352, 486
BciT130I	CCWGG	5 cut(s)	28, 297, 864, 1035, 1298
BclI	TGATCA	1 cut(s)	1273
BcnI	CCSGG	1 cut(s)	1127
BcoDI	GTCTC	7 cut(s)	56, 98, 130, 246, 344, 1325, 1588
BfaI	CTAG	2 cut(s)	438, 1488
BfmI	CTRYAG	1 cut(s)	966
BisI	GCNGC	4 cut(s)	531, 966, 1017, 1439
BlsI	GCNGC	4 cut(s)	532, 967, 1018, 1440
Bme1390I	CCNGG	6 cut(s)	28, 297, 864, 1035, 1127, 1298
Bme18I	GGWCC	1 cut(s)	1343
BmeT110I	CYCGRG	2 cut(s)	87, 1495
BmgT120I	GGNCC	3 cut(s)	1242, 1243, 1343
BmiI	GGNNCC	7 cut(s)	181, 876, 1039, 1243, 1244, 1344, 1474
BmrFI	CCNGG	6 cut(s)	28, 297, 864, 1035, 1127, 1298
BmrI	ACTGGG	1 cut(s)	1092
BmsI	GCATC	5 cut(s)	379, 507, 1045, 1150, 1226
BmuI	ACTGGG	1 cut(s)	1092
BpiI	GAAGAC	1 cut(s)	920
BplI	GAGNNNNNCTC	2 cut(s)	291, 323
BpmI	CTGGAG	3 cut(s)	318, 770, 1056
BpuEI	CTTGAG	2 cut(s)	1402, 1570
BpuMI	CCSGG	1 cut(s)	1127
BsaHI	GRCGYC	2 cut(s)	165, 229
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	2 cut(s)	453, 1494
BsaXI	ACNNNNNCTCC	2 cut(s)	171, 201
Bsc4I	CCNNNNNNNGG	4 cut(s)	421, 1034, 1082, 1252
Bse118I	RCCGGY	2 cut(s)	182, 191
Bse1I	ACTGG	2 cut(s)	1087, 1211
Bse21I	CCTNAGG	1 cut(s)	711
BseBI	CCWGG	5 cut(s)	28, 297, 864, 1035, 1298
BseDI	CCNNGG	2 cut(s)	453, 1494
BseGI	GGATG	6 cut(s)	229, 430, 522, 724, 1060, 1217
BseLI	CCNNNNNNNGG	4 cut(s)	421, 1034, 1082, 1252
BseMII	CTCAG	5 cut(s)	407, 483, 944, 1150, 1374
BseNI	ACTGG	2 cut(s)	1087, 1211
BseRI	GAGGAG	2 cut(s)	116, 499
BseSI	GKGCMC	1 cut(s)	1246
BseXI	GCAGC	2 cut(s)	952, 1425
BseYI	CCCAGC	1 cut(s)	322
BsgI	GTGCAG	1 cut(s)	32
Bsh1236I	CGCG	2 cut(s)	134, 1461
BshFI	GGCC	6 cut(s)	26, 367, 501, 902, 1141, 1244
BshNI	GGYRCC	1 cut(s)	1472
BsiHKAI	GWGCWC	1 cut(s)	1125
BsiHKCI	CYCGRG	2 cut(s)	87, 1495
BsiSI	CCGG	4 cut(s)	98, 183, 192, 1126
BslFI	GGGAC	2 cut(s)	339, 1356
BslI	CCNNNNNNNGG	4 cut(s)	421, 1034, 1082, 1252
BsmAI	GTCTC	7 cut(s)	56, 98, 130, 246, 344, 1325, 1588
BsmBI	CGTCTC	2 cut(s)	130, 1588
BsmFI	GGGAC	2 cut(s)	339, 1356
BsmI	GAATGC	2 cut(s)	143, 1058
BsnI	GGCC	6 cut(s)	26, 367, 501, 902, 1141, 1244
Bso31I	GGTCTC	1 cut(s)	56
BsoBI	CYCGRG	2 cut(s)	87, 1495
Bsp120I	GGGCCC	1 cut(s)	1242
Bsp1286I	GDGCHC	2 cut(s)	1125, 1246
Bsp143I	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
BspACI	CCGC	7 cut(s)	5, 59, 73, 134, 530, 1017, 1204
BspANI	GGCC	6 cut(s)	26, 367, 501, 902, 1141, 1244
BspCNI	CTCAG	5 cut(s)	406, 482, 943, 1149, 1373
BspFNI	CGCG	2 cut(s)	134, 1461
BspLI	GGNNCC	7 cut(s)	181, 876, 1039, 1243, 1244, 1344, 1474
BspMAI	CTGCAG	1 cut(s)	970
BspPI	GGATC	3 cut(s)	38, 701, 1137
BspT107I	GGYRCC	1 cut(s)	1472
BspTNI	GGTCTC	1 cut(s)	56
BsrBI	CCGCTC	1 cut(s)	1019
BsrFI	RCCGGY	2 cut(s)	182, 191
BsrI	ACTGG	2 cut(s)	1087, 1211
BssAI	RCCGGY	2 cut(s)	182, 191
BssECI	CCNNGG	2 cut(s)	453, 1494
BssMI	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
BssNI	GRCGYC	2 cut(s)	165, 229
BssT1I	CCWWGG	1 cut(s)	453
Bst2UI	CCWGG	5 cut(s)	28, 297, 864, 1035, 1298
Bst4CI	ACNGT	6 cut(s)	124, 568, 758, 919, 1099, 1558
Bst6I	CTCTTC	2 cut(s)	62, 543
BstACI	GRCGYC	2 cut(s)	165, 229
BstC8I	GCNNGC	4 cut(s)	193, 1010, 1014, 1303
BstDEI	CTNAG	8 cut(s)	393, 469, 711, 793, 930, 1136, 1316, 1360
BstEII	GGTNACC	1 cut(s)	1390
BstENI	CCTNNNNNAGG	2 cut(s)	419, 1250
BstF5I	GGATG	6 cut(s)	229, 430, 522, 724, 1060, 1217
BstFNI	CGCG	2 cut(s)	134, 1461
BstHHI	GCGC	3 cut(s)	1071, 1149, 1296
BstKTI	GATC	7 cut(s)	33, 146, 709, 763, 828, 1132, 1276
BstMAI	GTCTC	7 cut(s)	56, 98, 130, 246, 344, 1325, 1588
BstMBI	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
BstMWI	GCNNNNNNNGC	5 cut(s)	188, 197, 556, 702, 1302
BstNI	CCWGG	5 cut(s)	28, 297, 864, 1035, 1298
BstNSI	RCATGY	4 cut(s)	242, 773, 788, 1012
BstPI	GGTNACC	1 cut(s)	1390
BstSCI	CCNGG	6 cut(s)	26, 295, 862, 1033, 1125, 1296
BstSFI	CTRYAG	1 cut(s)	966
BstSLI	GKGCMC	1 cut(s)	1246
BstUI	CGCG	2 cut(s)	134, 1461
BstV1I	GCAGC	2 cut(s)	952, 1425
BstV2I	GAAGAC	1 cut(s)	920
BstX2I	RGATCY	2 cut(s)	30, 1129
BstYI	RGATCY	2 cut(s)	30, 1129
Bsu36I	CCTNAGG	1 cut(s)	711
BsuRI	GGCC	6 cut(s)	26, 367, 501, 902, 1141, 1244
BtsCI	GGATG	6 cut(s)	229, 430, 522, 724, 1060, 1217
BtsI	GCAGTG	1 cut(s)	121
BtsIMutI	CAGTG	2 cut(s)	121, 1218
Cac8I	GCNNGC	4 cut(s)	193, 1010, 1014, 1303
CaiI	CAGNNNCTG	1 cut(s)	19
CfoI	GCGC	3 cut(s)	1071, 1149, 1296
Cfr10I	RCCGGY	2 cut(s)	182, 191
Cfr13I	GGNCC	3 cut(s)	1242, 1243, 1343
CseI	GACGC	1 cut(s)	702
Csp6I	GTAC	3 cut(s)	16, 834, 860
CviAII	CATG	6 cut(s)	239, 361, 770, 779, 785, 1009
CviQI	GTAC	3 cut(s)	16, 834, 860
DdeI	CTNAG	8 cut(s)	393, 469, 711, 793, 930, 1136, 1316, 1360
DpnI	GATC	7 cut(s)	32, 145, 708, 762, 827, 1131, 1275
DpnII	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
DrdI	GACNNNNNNGTC	1 cut(s)	164
DseDI	GACNNNNNNGTC	1 cut(s)	164
EaeI	YGGCCR	3 cut(s)	365, 499, 900
Eam1104I	CTCTTC	2 cut(s)	62, 543
EarI	CTCTTC	2 cut(s)	62, 543
EciI	GGCGGA	1 cut(s)	88
Eco130I	CCWWGG	1 cut(s)	453
Eco147I	AGGCCT	1 cut(s)	1141
Eco24I	GRGCYC	1 cut(s)	1246
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	1 cut(s)	1343
Eco81I	CCTNAGG	1 cut(s)	711
Eco88I	CYCGRG	2 cut(s)	87, 1495
Eco91I	GGTNACC	1 cut(s)	1390
EcoNI	CCTNNNNNAGG	2 cut(s)	419, 1250
EcoO109I	RGGNCCY	2 cut(s)	1242, 1243
EcoO65I	GGTNACC	1 cut(s)	1390
EcoRII	CCWGG	5 cut(s)	26, 295, 862, 1033, 1296
EcoT14I	CCWWGG	1 cut(s)	453
EcoT22I	ATGCAT	1 cut(s)	1060
EcoT38I	GRGCYC	1 cut(s)	1246
ErhI	CCWWGG	1 cut(s)	453
Esp3I	CGTCTC	2 cut(s)	130, 1588
FaeI	CATG	6 cut(s)	242, 364, 773, 782, 788, 1012
FaqI	GGGAC	2 cut(s)	339, 1356
FatI	CATG	6 cut(s)	238, 360, 769, 778, 784, 1008
FauNDI	CATATG	1 cut(s)	646
FbaI	TGATCA	1 cut(s)	1273
FblI	GTMKAC	2 cut(s)	162, 1429
Fnu4HI	GCNGC	4 cut(s)	531, 966, 1017, 1439
FokI	GGATG	6 cut(s)	236, 437, 529, 731, 1067, 1204
FriOI	GRGCYC	1 cut(s)	1246
Fsp4HI	GCNGC	4 cut(s)	531, 966, 1017, 1439
FspBI	CTAG	2 cut(s)	438, 1488
FspI	TGCGCA	1 cut(s)	1148
GlaI	GCGC	3 cut(s)	1070, 1148, 1295
GluI	GCNGC	4 cut(s)	531, 966, 1017, 1439
GsaI	CCCAGC	1 cut(s)	326
GsuI	CTGGAG	3 cut(s)	318, 770, 1056
HaeIII	GGCC	6 cut(s)	26, 367, 501, 902, 1141, 1244
HapII	CCGG	4 cut(s)	98, 183, 192, 1126
HgaI	GACGC	1 cut(s)	702
HhaI	GCGC	3 cut(s)	1071, 1149, 1296
Hin1I	GRCGYC	2 cut(s)	165, 229
Hin1II	CATG	6 cut(s)	242, 364, 773, 782, 788, 1012
Hin6I	GCGC	3 cut(s)	1069, 1147, 1294
HinP1I	GCGC	3 cut(s)	1069, 1147, 1294
HincII	GTYRAC	1 cut(s)	1430
HindII	GTYRAC	1 cut(s)	1430
HinfI	GANTC	5 cut(s)	441, 934, 953, 1187, 1500
HpaII	CCGG	4 cut(s)	98, 183, 192, 1126
HphI	GGTGA	5 cut(s)	76, 112, 293, 905, 1443
Hpy166II	GTNNAC	3 cut(s)	163, 284, 1430
Hpy188I	TCNGA	8 cut(s)	179, 218, 396, 472, 825, 933, 1111, 1325
Hpy188III	TCNNGA	8 cut(s)	152, 632, 749, 988, 1184, 1271, 1362, 1497
Hpy8I	GTNNAC	3 cut(s)	163, 284, 1430
Hpy99I	CGWCG	5 cut(s)	158, 161, 179, 234, 696
HpyAV	CCTTC	7 cut(s)	326, 735, 813, 888, 967, 1279, 1520
HpyCH4III	ACNGT	6 cut(s)	124, 568, 758, 919, 1099, 1558
HpyCH4IV	ACGT	3 cut(s)	159, 165, 229
HpyF10VI	GCNNNNNNNGC	5 cut(s)	188, 197, 556, 702, 1302
HpyF3I	CTNAG	8 cut(s)	393, 469, 711, 793, 930, 1136, 1316, 1360
HpySE526I	ACGT	3 cut(s)	159, 165, 229
Hsp92I	GRCGYC	2 cut(s)	165, 229
Hsp92II	CATG	6 cut(s)	242, 364, 773, 782, 788, 1012
HspAI	GCGC	3 cut(s)	1069, 1147, 1294
KroI	GCCGGC	1 cut(s)	191
KroNI	GCCGGC	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	1273
Kzo9I	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
LmnI	GCTCC	7 cut(s)	75, 179, 486, 556, 1024, 1037, 1128
Lsp1109I	GCAGC	2 cut(s)	952, 1425
LweI	GCATC	5 cut(s)	379, 507, 1045, 1150, 1226
MaeI	CTAG	2 cut(s)	438, 1488
MaeII	ACGT	3 cut(s)	159, 165, 229
MaeIII	GTNAC	4 cut(s)	118, 568, 980, 1390
MalI	GATC	7 cut(s)	32, 145, 708, 762, 827, 1131, 1275
MbiI	CCGCTC	1 cut(s)	1019
MboI	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
MboII	GAAGA	9 cut(s)	25, 79, 530, 596, 755, 925, 1124, 1254, 1257
MfeI	CAATTG	1 cut(s)	551
MflI	RGATCY	2 cut(s)	30, 1129
MhlI	GDGCHC	2 cut(s)	1125, 1246
MlsI	TGGCCA	1 cut(s)	902
MluI	ACGCGT	1 cut(s)	1459
MluNI	TGGCCA	1 cut(s)	902
MlyI	GAGTC	1 cut(s)	435
MmeI	TCCRAC	1 cut(s)	157
Mox20I	TGGCCA	1 cut(s)	902
Mph1103I	ATGCAT	1 cut(s)	1060
MroNI	GCCGGC	1 cut(s)	191
MscI	TGGCCA	1 cut(s)	902
MseI	TTAA	3 cut(s)	314, 600, 1518
MslI	CAYNNNNRTG	3 cut(s)	59, 471, 783
Msp20I	TGGCCA	1 cut(s)	902
MspI	CCGG	4 cut(s)	98, 183, 192, 1126
MspR9I	CCNGG	6 cut(s)	28, 297, 864, 1035, 1127, 1298
MunI	CAATTG	1 cut(s)	551
Mva1269I	GAATGC	2 cut(s)	143, 1058
MvaI	CCWGG	5 cut(s)	28, 297, 864, 1035, 1298
MvnI	CGCG	2 cut(s)	134, 1461
MwoI	GCNNNNNNNGC	5 cut(s)	188, 197, 556, 702, 1302
NaeI	GCCGGC	1 cut(s)	193
NciI	CCSGG	1 cut(s)	1127
NdeI	CATATG	1 cut(s)	646
NdeII	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
NgoMIV	GCCGGC	1 cut(s)	191
NlaIII	CATG	6 cut(s)	242, 364, 773, 782, 788, 1012
NlaIV	GGNNCC	7 cut(s)	181, 876, 1039, 1243, 1244, 1344, 1474
NmuCI	GTSAC	1 cut(s)	118
NsbI	TGCGCA	1 cut(s)	1148
NsiI	ATGCAT	1 cut(s)	1060
NspI	RCATGY	4 cut(s)	242, 773, 788, 1012
PaeI	GCATGC	1 cut(s)	1012
PceI	AGGCCT	1 cut(s)	1141
PcsI	WCGNNNNNNNCGW	2 cut(s)	162, 171
PctI	GAATGC	2 cut(s)	143, 1058
PdiI	GCCGGC	1 cut(s)	193
PfeI	GAWTC	4 cut(s)	934, 953, 1187, 1500
PfoI	TCCNGGA	2 cut(s)	1033, 1125
PkrI	GCNGC	4 cut(s)	532, 967, 1018, 1440
PleI	GAGTC	1 cut(s)	435
PpsI	GAGTC	1 cut(s)	435
PshBI	ATTAAT	1 cut(s)	314
PsiI	TTATAA	1 cut(s)	1251
Psp6I	CCWGG	5 cut(s)	26, 295, 862, 1033, 1296
PspEI	GGTNACC	1 cut(s)	1390
PspFI	CCCAGC	1 cut(s)	322
PspGI	CCWGG	5 cut(s)	26, 295, 862, 1033, 1296
PspN4I	GGNNCC	7 cut(s)	181, 876, 1039, 1243, 1244, 1344, 1474
PspOMI	GGGCCC	1 cut(s)	1242
PspPI	GGNCC	3 cut(s)	1242, 1243, 1343
PstI	CTGCAG	1 cut(s)	970
PstNI	CAGNNNCTG	1 cut(s)	19
PsuI	RGATCY	2 cut(s)	30, 1129
RsaI	GTAC	3 cut(s)	17, 835, 861
RsaNI	GTAC	3 cut(s)	16, 834, 860
RseI	CAYNNNNRTG	3 cut(s)	59, 471, 783
SalI	GTCGAC	1 cut(s)	1428
SaqAI	TTAA	3 cut(s)	314, 600, 1518
SatI	GCNGC	4 cut(s)	531, 966, 1017, 1439
Sau3AI	GATC	7 cut(s)	30, 143, 706, 760, 825, 1129, 1273
Sau96I	GGNCC	3 cut(s)	1242, 1243, 1343
SchI	GAGTC	1 cut(s)	435
ScrFI	CCNGG	6 cut(s)	28, 297, 864, 1035, 1127, 1298
SduI	GDGCHC	2 cut(s)	1125, 1246
SfaNI	GCATC	5 cut(s)	379, 507, 1045, 1150, 1226
SfcI	CTRYAG	1 cut(s)	966
SinI	GGWCC	1 cut(s)	1343
SmiMI	CAYNNNNRTG	3 cut(s)	59, 471, 783
SmlI	CTYRAG	2 cut(s)	1381, 1585
SmoI	CTYRAG	2 cut(s)	1381, 1585
SphI	GCATGC	1 cut(s)	1012
SseBI	AGGCCT	1 cut(s)	1141
SsiI	CCGC	7 cut(s)	5, 59, 73, 134, 530, 1017, 1204
SspMI	CTAG	2 cut(s)	438, 1488
StuI	AGGCCT	1 cut(s)	1141
StyD4I	CCNGG	6 cut(s)	26, 295, 862, 1033, 1125, 1296
StyI	CCWWGG	1 cut(s)	453
TaaI	ACNGT	6 cut(s)	124, 568, 758, 919, 1099, 1558
TaiI	ACGT	3 cut(s)	162, 168, 232
TaqI	TCGA	2 cut(s)	232, 1429
TaqII	GACCGA	1 cut(s)	285
TauI	GCSGC	2 cut(s)	533, 1019
TfiI	GAWTC	4 cut(s)	934, 953, 1187, 1500
Tru1I	TTAA	3 cut(s)	314, 600, 1518
Tru9I	TTAA	3 cut(s)	314, 600, 1518
TscAI	CASTG	2 cut(s)	121, 1218
TseFI	GTSAC	1 cut(s)	118
TseI	GCWGC	2 cut(s)	965, 1438
Tsp45I	GTSAC	1 cut(s)	118
TspDTI	ATGAA	2 cut(s)	496, 949
TspGWI	ACGGA	2 cut(s)	31, 851
TspRI	CASTG	2 cut(s)	121, 1218
VpaK11BI	GGWCC	1 cut(s)	1343
VspI	ATTAAT	1 cut(s)	314
XagI	CCTNNNNNAGG	2 cut(s)	419, 1250
XapI	RAATTY	2 cut(s)	461, 945
XceI	RCATGY	4 cut(s)	242, 773, 788, 1012
XcmI	CCANNNNNNNNNTGG	3 cut(s)	550, 1079, 1231
XmiI	GTMKAC	2 cut(s)	162, 1429
XspI	CTAG	2 cut(s)	438, 1488
ZraI	GACGTC	2 cut(s)	166, 230
Zsp2I	ATGCAT	1 cut(s)	1060

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.