Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0011338

Physical Location & Seq

Genomic Coordinates Forward (+)

25526674 .. 25532539

Gene Structure 5866 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g34320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGGAAGACGAGGAAATAGAGGAGGGGATGCTGGTGGAGGAAGAAGCTGCTCCGCCGCGGCCGGAGAAGTCGCCGTACGAAGTTTTGCGAGAGAGCAAATCTTCGGTGGAAGACGTAGTTGCCAGAATGCTCTCCATCAAAAAAGAAGGCAAACCTAAATCGGAGGTCCGTGAGCTCGTCACTCAGATGTTCCTCAACTTCGTCACTCTCCGCCAGGCGAACCGTTCGATCTTGCTTGAGGAGGACCGCGTGAAATCGGAGACGGAGAGCGCGAAGGCTCCGGTGGACATGACGACGTTGCAGCTCCACAATTTGATGTACGAGAAGAGTCACTACGTGAAGGCCATCAAAGCTTGCAAAGATTTCAAGTCCAAGTACCCGGACATCGACCTTGTGCCGGAAGAAGAGTTCTTCCGGGATGCTCCGGCGAGTATCAAAGAGCCAACATTGTCAAACGACGCGGCGCAGGACCTGATGCTCAAGAGGCTCAATTTCGAGCTACATCAGCGGAAGGAGCTGTGTAAGCTTAATGAGAAGCTGGAGATGCATAAGAAGGGGTTGCAGGAGACGATTGCGAGTCGGAAGAAGTTCTTGAACAGTCTTCCCTCGCACCTCAAGTCTCTGAAGAAGGCGTCACTGCCGGTGCAGAATCAGTTTGGAAATATGCACACGAAGAAGCTCAAACAGCATCACTCGGCCAAGTTGCTGCCGCCACCTCTCTATGTGGTTTACTCGCAGTTCTCGGCGCAGAAGGAAGCTTTTGAAGAACAGATTGATTTGGAGATTGTTGGAAGTGTGAAGGATGCTCAAGCTTTTGTGCACCAGCAAGCAAATAGAGACACAGGTGTTTCTACAAATGGAGAGGCTAGTAGGTTAGATGATGATGCACCAGATGAGGAAGATGATGGGCAGAGAAGGAGAAAGAGACCCAAGAGAGCTCCAACCAAGCAGAACCCTGATCAATCAGGAGTATATCAATTGCACCCGTTGAAAGTTATTCTTCATGTTTATGACAATGAGGCTTCTGATCCTAAGTCTGCAAAACTAGTAACCCTCAAGTTTGAGTATTTGTTGAAGTTGAATGTTGTCTGTGTTGGAGTTGAAGGATCTCATGAGGCAGCGGAGAATAACATCTTATGTAACCTATTCCCAGATGACACTGGCCTTGAGCTTCCCCATCAGTCAGCCAAGCTTATTGTTGATGGGACTCCTGCATTTGATGAAAAGAGAACATCCCGTCCATATAAGTGGGCCCAGCATTTGGCTGGAATTGATTTTTTGCCTGAGGTGTCACCTTTGCTTGCTGTCCATGATGCTCCAACCAGTGCCATAACTAAAACTGATGCTGTTATGTCTGGTCTGTCGCTTTATCGCCAGCAAAATCGAGTACAGACAGTTGTACGTAGAATTCGCTCTCGGAAGAAAGCTCAGATGGCTCTTGTGGAACAGCTTGAATCACTCATGAAGCTTAAATGGCCAGCTTTGTCTTGTAAAAGTGTTCCATGGGCTTTGCATGCTCCTCTGTGCAAATTACATGGTTGTTCACCTGTAGGACCTCCACCTACTCCGGCATCATCTTTGTCGGCCATAGATAAGGAGCAGGTTCAGGAACCTATAGATGCTGATTCAGTTGGGCGATCTGGTTCTTCAAAGGAAGAGCTGGAGAGTATGAGGGAAGATGGGGAACTTCCATCTTTGGTTCAAGTTGCATCAGTCAGTGATGATAAACTTGTTCAGCACAAAGGAGACTCTAGGAGGCTATCATTACTTTCGAAAAGACCTCCCGTCAGTACTGCAAAGCCACTAAGTTATAAAAGACATAATGAAGAATTAGATTTTTTGCTGGATACTGAAAGTGATGTGGATGAAGCTGCACATATTACGCCAGAAGAAGAAAATGGGGTGCCTATCCAATGCTTTGAGGTGGCTGGAAATTCATGGGTGGATTTCGGGACAAGGGAATTTCGTCTTGTTTTAACCAGGAGAATAGACTCAGAGAAGAGGAATGTGAAGTTAGAAGCCAAGATTAAGATCAGCATGGAGTATCCTTTGAGGCCTCCCTTTTTTACATTGAGTCTTTGCACTATGTCTGGAGAAAATCATTATGTGAGTGATGATTCTGAGTTGTACAATGAACTTCGTGCAATGGAAGCCGAGGTCAATCTTCACATTGTAAAGATGTTATCTCAAAATGAAGAAAATAATATCCTAGGTCATCAAGTTTGTTGTCTAGCAATGTTGTTCGACTATTACATGGACGAAGCATCCCCATCTTCTGAGAAGAGAAAGAGTACATCAGTGGTTGATGTTGGATTGTGTAAGCCTGTTAGTGGTCAGCTTATTGCCAGATCATTTAGAGGAAGGGATCGCAGGAAGATGATATCCTGGAAGGATATGGAATGCAATCCTGGCTATCCATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000346 GO:0000347 GO:0000445 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006355 GO:0006403 GO:0006405 GO:0006406 GO:0006611 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008150 GO:0008152 GO:0009889 GO:0009891 GO:0009893 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015031 GO:0015833 GO:0015931 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031974 GO:0031981 GO:0032784 GO:0032786 GO:0032991 GO:0033036 GO:0034613 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045184 GO:0045893 GO:0045935 GO:0046907 GO:0048518 GO:0048522 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0060255 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0080090 GO:0097159 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

FimP

Protein Analysis

808

Amino Acids

91.22

Weight (kDa)

6.09

Isoelectric Point (pI)

54.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FmiP_Thoc5	PF09766	69 - 426	1.3e-112	Fms-interacting protein/Thoc5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0011338)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45233 AT5G42920 AT5G42920
fragaria_vesca	FvH4_2g34320 FvH4_2g34320
malus_domestica	MD15G1081700.v1.1
prunus_persica	Prupe.1G434400_v2.0.a1
pyrus_communis	pycom08g08080 pycom15g07640
rosa_chinensis	RchiOBHm_Chr6g0308041
rosa_laevigata	RLG00000010673
rosa_multiflora	Rmu_co8496519.1_g000001 Rmu_sc0002624.1_g000002
rosa_roxburghii	Rroxscaffold_7G00160640
rosa_rugosa	Rorug06G0363300
rosa_samantha	Rh6AG472200 Rh6BG483200 Rh6CG488300 Rh6DG474600
rosa_wichuraiana	Rw6G041210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1812
Acc36I	ACCTGC	1 cut(s)	1591
AccB1I	GGYRCC	1 cut(s)	1903
AccB7I	CCANNNNNTGG	1 cut(s)	1261
AccII	CGCG	4 cut(s)	58, 249, 272, 461
AciI	CCGC	9 cut(s)	53, 56, 58, 211, 247, 461, 508, 710, 1121
AclWI	GGATC	3 cut(s)	1022, 1114, 2373
AcoI	YGGCCR	4 cut(s)	59, 696, 1475, 1584
AcsI	RAATTY	3 cut(s)	1407, 1933, 1961
AcuI	CTGAAG	1 cut(s)	644
AcyI	GRCGYC	1 cut(s)	632
AdeI	CACNNNGTG	1 cut(s)	337
AfaI	GTAC	8 cut(s)	77, 320, 377, 1389, 1401, 1792, 2129, 2293
AfiI	CCNNNNNNNGG	3 cut(s)	397, 1261, 2330
AhdI	GACNNNNNGTC	1 cut(s)	1784
AhlI	ACTAGT	1 cut(s)	1045
AjnI	CCWGG	4 cut(s)	213, 1979, 2384, 2407
AloI	GAACNNNNNNTCC	4 cut(s)	392, 424, 1222, 1254
Alw21I	GWGCWC	3 cut(s)	177, 822, 940
Alw26I	GTCTC	6 cut(s)	254, 560, 624, 831, 919, 1740
Alw44I	GTGCAC	1 cut(s)	818
AlwI	GGATC	3 cut(s)	1022, 1114, 2373
AlwNI	CAGNNNCTG	1 cut(s)	472
AoxI	GGCC	8 cut(s)	59, 342, 696, 1162, 1251, 1475, 1584, 2054
ApaI	GGGCCC	1 cut(s)	1255
ApaLI	GTGCAC	1 cut(s)	818
ApeKI	GCWGC	5 cut(s)	47, 301, 706, 1118, 1871
ApoI	RAATTY	3 cut(s)	1407, 1933, 1961
Asp700I	GAANNNNTTC	1 cut(s)	587
AspA2I	CCTAGG	1 cut(s)	2209
AspLEI	GCGC	3 cut(s)	272, 466, 748
AspS9I	GGNCC	6 cut(s)	166, 244, 469, 1251, 1252, 1553
AsuC2I	CCSGG	2 cut(s)	380, 416
AsuHPI	GGTGA	2 cut(s)	1284, 1536
AsuII	TTCGAA	1 cut(s)	1772
AvaII	GGWCC	4 cut(s)	166, 244, 469, 1553
AvrII	CCTAGG	1 cut(s)	2209
AxyI	CCTNAGG	1 cut(s)	1284
BaeGI	GKGCMC	2 cut(s)	822, 1255
BalI	TGGCCA	1 cut(s)	1477
BanI	GGYRCC	1 cut(s)	1903
BanII	GRGCYC	3 cut(s)	177, 940, 1255
BarI	GAAGNNNNNNTAC	4 cut(s)	59, 91, 317, 349
BbsI	GAAGAC	3 cut(s)	12, 117, 593
Bbv12I	GWGCWC	3 cut(s)	177, 822, 940
BbvI	GCAGC	5 cut(s)	34, 313, 693, 1130, 1858
BccI	CCATC	9 cut(s)	143, 353, 899, 1185, 1196, 1426, 1673, 1699, 2278
BceAI	ACGGC	1 cut(s)	58
BciT130I	CCWGG	4 cut(s)	215, 1981, 2386, 2409
BciVI	GTATCC	2 cut(s)	1840, 2055
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	2 cut(s)	380, 416
BcoDI	GTCTC	6 cut(s)	254, 560, 624, 831, 919, 1740
BcuI	ACTAGT	1 cut(s)	1045
BfaI	CTAG	6 cut(s)	867, 1046, 1752, 2210, 2231, 2422
BfmI	CTRYAG	2 cut(s)	1548, 1614
BfuAI	ACCTGC	1 cut(s)	1591
BfuI	GTATCC	2 cut(s)	1840, 2055
BisI	GCNGC	9 cut(s)	48, 56, 59, 302, 462, 707, 710, 1119, 1872
BlnI	CCTAGG	1 cut(s)	2209
BlsI	GCNGC	9 cut(s)	49, 57, 60, 303, 463, 708, 711, 1120, 1873
BmcAI	AGTACT	1 cut(s)	1792
Bme1390I	CCNGG	6 cut(s)	215, 380, 416, 1981, 2386, 2409
Bme18I	GGWCC	4 cut(s)	166, 244, 469, 1553
BmeRI	GACNNNNNGTC	1 cut(s)	1784
BmgT120I	GGNCC	6 cut(s)	166, 244, 469, 1251, 1252, 1553
BmiI	GGNNCC	4 cut(s)	279, 1253, 1611, 1905
BmrFI	CCNGG	6 cut(s)	215, 380, 416, 1981, 2386, 2409
BpiI	GAAGAC	3 cut(s)	12, 117, 593
BpmI	CTGGAG	3 cut(s)	560, 1682, 2112
Bpu14I	TTCGAA	1 cut(s)	1772
BpuEI	CTTGAG	6 cut(s)	257, 464, 599, 792, 1040, 1187
BpuMI	CCSGG	2 cut(s)	380, 416
BsaAI	YACGTR	2 cut(s)	337, 1403
BsaBI	GATNNNNATC	1 cut(s)	2030
BsaHI	GRCGYC	1 cut(s)	632
BsaI	GGTCTC	1 cut(s)	919
BsaJI	CCNNGG	4 cut(s)	56, 1502, 2154, 2209
BsaWI	WCCGGW	1 cut(s)	280
Bsc4I	CCNNNNNNNGG	3 cut(s)	397, 1261, 2330
Bse118I	RCCGGY	1 cut(s)	640
Bse1I	ACTGG	2 cut(s)	1165, 1323
Bse21I	CCTNAGG	1 cut(s)	1284
Bse3DI	GCAATG	2 cut(s)	2151, 2241
Bse8I	GATNNNNATC	1 cut(s)	2030
BseBI	CCWGG	4 cut(s)	215, 1981, 2386, 2409
BseDI	CCNNGG	4 cut(s)	56, 1502, 2154, 2209
BseGI	GGATG	6 cut(s)	33, 424, 808, 1232, 1870, 2264
BseJI	GATNNNNATC	1 cut(s)	2030
BseLI	CCNNNNNNNGG	3 cut(s)	397, 1261, 2330
BseMI	GCAATG	2 cut(s)	2151, 2241
BseMII	CTCAG	6 cut(s)	197, 1275, 1442, 2007, 2112, 2268
BseNI	ACTGG	2 cut(s)	1165, 1323
BseRI	GAGGAG	3 cut(s)	35, 254, 1509
BseSI	GKGCMC	2 cut(s)	822, 1255
BseX3I	CGGCCG	1 cut(s)	59
BseXI	GCAGC	5 cut(s)	34, 313, 693, 1130, 1858
BseYI	CCCAGC	1 cut(s)	1254
BsgI	GTGCAG	2 cut(s)	665, 1857
Bsh1236I	CGCG	4 cut(s)	58, 249, 272, 461
Bsh1285I	CGRYCG	1 cut(s)	62
BshFI	GGCC	8 cut(s)	61, 344, 698, 1164, 1253, 1477, 1586, 2056
BshNI	GGYRCC	1 cut(s)	1903
BsiEI	CGRYCG	1 cut(s)	62
BsiHKAI	GWGCWC	3 cut(s)	177, 822, 940
BsiSI	CCGG	8 cut(s)	62, 281, 380, 398, 415, 425, 641, 1568
BsiWI	CGTACG	1 cut(s)	75
BslFI	GGGAC	2 cut(s)	1219, 1966
BslI	CCNNNNNNNGG	3 cut(s)	397, 1261, 2330
BsmAI	GTCTC	6 cut(s)	254, 560, 624, 831, 919, 1740
BsmBI	CGTCTC	2 cut(s)	254, 560
BsmFI	GGGAC	2 cut(s)	1219, 1966
BsmI	GAATGC	2 cut(s)	132, 2405
BsnI	GGCC	8 cut(s)	61, 344, 698, 1164, 1253, 1477, 1586, 2056
Bso31I	GGTCTC	1 cut(s)	919
Bsp119I	TTCGAA	1 cut(s)	1772
Bsp120I	GGGCCC	1 cut(s)	1251
Bsp1286I	GDGCHC	4 cut(s)	177, 822, 940, 1255
Bsp1407I	TGTACA	1 cut(s)	2127
Bsp143I	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
Bsp19I	CCATGG	1 cut(s)	1502
BspACI	CCGC	9 cut(s)	53, 56, 58, 211, 247, 461, 508, 710, 1121
BspANI	GGCC	8 cut(s)	61, 344, 698, 1164, 1253, 1477, 1586, 2056
BspCNI	CTCAG	6 cut(s)	196, 1276, 1441, 2006, 2113, 2269
BspFNI	CGCG	4 cut(s)	58, 249, 272, 461
BspHI	TCATGA	2 cut(s)	1111, 1461
BspLI	GGNNCC	4 cut(s)	279, 1253, 1611, 1905
BspMI	ACCTGC	1 cut(s)	1591
BspPI	GGATC	3 cut(s)	1022, 1114, 2373
BspQI	GCTCTTC	1 cut(s)	1650
BspT104I	TTCGAA	1 cut(s)	1772
BspT107I	GGYRCC	1 cut(s)	1903
BspTNI	GGTCTC	1 cut(s)	919
BsrDI	GCAATG	2 cut(s)	2151, 2241
BsrFI	RCCGGY	1 cut(s)	640
BsrGI	TGTACA	1 cut(s)	2127
BsrI	ACTGG	2 cut(s)	1165, 1323
BssAI	RCCGGY	1 cut(s)	640
BssECI	CCNNGG	4 cut(s)	56, 1502, 2154, 2209
BssMI	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
BssNI	GRCGYC	1 cut(s)	632
BssT1I	CCWWGG	2 cut(s)	1502, 2209
Bst2UI	CCWGG	4 cut(s)	215, 1981, 2386, 2409
Bst4CI	ACNGT	3 cut(s)	224, 599, 1396
Bst6I	CTCTTC	5 cut(s)	320, 399, 1650, 1994, 2276
BstACI	GRCGYC	1 cut(s)	632
BstAUI	TGTACA	1 cut(s)	2127
BstBAI	YACGTR	2 cut(s)	337, 1403
BstBI	TTCGAA	1 cut(s)	1772
BstC8I	GCNNGC	6 cut(s)	355, 828, 1302, 1376, 1479, 1515
BstDEI	CTNAG	8 cut(s)	183, 1032, 1284, 1428, 1805, 1993, 2121, 2277
BstDSI	CCRYGG	2 cut(s)	56, 1502
BstF5I	GGATG	6 cut(s)	33, 424, 808, 1232, 1870, 2264
BstFNI	CGCG	4 cut(s)	58, 249, 272, 461
BstHHI	GCGC	3 cut(s)	272, 466, 748
BstKTI	GATC	8 cut(s)	231, 961, 1030, 1109, 1640, 2034, 2351, 2368
BstMAI	GTCTC	6 cut(s)	254, 560, 624, 831, 919, 1740
BstMBI	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
BstMCI	CGRYCG	1 cut(s)	62
BstNI	CCWGG	4 cut(s)	215, 1981, 2386, 2409
BstNSI	RCATGY	1 cut(s)	1517
BstSCI	CCNGG	6 cut(s)	213, 378, 414, 1979, 2384, 2407
BstSFI	CTRYAG	2 cut(s)	1548, 1614
BstSLI	GKGCMC	2 cut(s)	822, 1255
BstSNI	TACGTA	1 cut(s)	1403
BstUI	CGCG	4 cut(s)	58, 249, 272, 461
BstV1I	GCAGC	5 cut(s)	34, 313, 693, 1130, 1858
BstV2I	GAAGAC	3 cut(s)	12, 117, 593
BstX2I	RGATCY	1 cut(s)	1106
BstXI	CCANNNNNNTGG	1 cut(s)	1248
BstYI	RGATCY	1 cut(s)	1106
BstZI	CGGCCG	1 cut(s)	59
Bsu36I	CCTNAGG	1 cut(s)	1284
BsuI	GTATCC	2 cut(s)	1840, 2055
BsuRI	GGCC	8 cut(s)	61, 344, 698, 1164, 1253, 1477, 1586, 2056
BtgI	CCRYGG	2 cut(s)	56, 1502
BtsCI	GGATG	6 cut(s)	33, 424, 808, 1232, 1870, 2264
BtsI	GCAGTG	1 cut(s)	635
BtsIMutI	CAGTG	5 cut(s)	635, 1158, 1330, 1723, 2304
BveI	ACCTGC	1 cut(s)	1591
Cac8I	GCNNGC	6 cut(s)	355, 828, 1302, 1376, 1479, 1515
CaiI	CAGNNNCTG	1 cut(s)	472
CciI	TCATGA	2 cut(s)	1111, 1461
CfoI	GCGC	3 cut(s)	272, 466, 748
Cfr10I	RCCGGY	1 cut(s)	640
Cfr13I	GGNCC	6 cut(s)	166, 244, 469, 1251, 1252, 1553
Cfr42I	CCGCGG	1 cut(s)	59
CseI	GACGC	2 cut(s)	467, 621
Csp6I	GTAC	8 cut(s)	76, 319, 376, 1388, 1400, 1791, 2128, 2292
CviQI	GTAC	8 cut(s)	76, 319, 376, 1388, 1400, 1791, 2128, 2292
DdeI	CTNAG	8 cut(s)	183, 1032, 1284, 1428, 1805, 1993, 2121, 2277
DpnI	GATC	8 cut(s)	230, 960, 1029, 1108, 1639, 2033, 2350, 2367
DpnII	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
DraIII	CACNNNGTG	1 cut(s)	337
DriI	GACNNNNNGTC	1 cut(s)	1784
EaeI	YGGCCR	4 cut(s)	59, 696, 1475, 1584
EagI	CGGCCG	1 cut(s)	59
Eam1104I	CTCTTC	5 cut(s)	320, 399, 1650, 1994, 2276
Eam1105I	GACNNNNNGTC	1 cut(s)	1784
EarI	CTCTTC	5 cut(s)	320, 399, 1650, 1994, 2276
EciI	GGCGGA	2 cut(s)	42, 200
Ecl136II	GAGCTC	2 cut(s)	175, 938
EclXI	CGGCCG	1 cut(s)	59
Eco105I	TACGTA	1 cut(s)	1403
Eco130I	CCWWGG	2 cut(s)	1502, 2209
Eco147I	AGGCCT	1 cut(s)	2056
Eco24I	GRGCYC	3 cut(s)	177, 940, 1255
Eco31I	GGTCTC	1 cut(s)	919
Eco32I	GATATC	1 cut(s)	2382
Eco47I	GGWCC	4 cut(s)	166, 244, 469, 1553
Eco52I	CGGCCG	1 cut(s)	59
Eco53kI	GAGCTC	2 cut(s)	175, 938
Eco57I	CTGAAG	1 cut(s)	644
Eco81I	CCTNAGG	1 cut(s)	1284
EcoICRI	GAGCTC	2 cut(s)	175, 938
EcoO109I	RGGNCCY	2 cut(s)	469, 1553
EcoRI	GAATTC	1 cut(s)	1407
EcoRII	CCWGG	4 cut(s)	213, 1979, 2384, 2407
EcoRV	GATATC	1 cut(s)	2382
EcoT14I	CCWWGG	2 cut(s)	1502, 2209
EcoT22I	ATGCAT	1 cut(s)	549
EcoT38I	GRGCYC	3 cut(s)	177, 940, 1255
ErhI	CCWWGG	2 cut(s)	1502, 2209
Esp3I	CGTCTC	2 cut(s)	254, 560
FalI	AAGNNNNNCTT	4 cut(s)	575, 607, 984, 1016
FaqI	GGGAC	2 cut(s)	1219, 1966
FbaI	TGATCA	1 cut(s)	958
Fnu4HI	GCNGC	9 cut(s)	48, 56, 59, 302, 462, 707, 710, 1119, 1872
FokI	GGATG	6 cut(s)	40, 431, 815, 1219, 1877, 2251
FriOI	GRGCYC	3 cut(s)	177, 940, 1255
Fsp4HI	GCNGC	9 cut(s)	48, 56, 59, 302, 462, 707, 710, 1119, 1872
FspBI	CTAG	6 cut(s)	867, 1046, 1752, 2210, 2231, 2422
GlaI	GCGC	3 cut(s)	271, 465, 747
GluI	GCNGC	9 cut(s)	48, 56, 59, 302, 462, 707, 710, 1119, 1872
GsaI	CCCAGC	1 cut(s)	1258
GsuI	CTGGAG	3 cut(s)	560, 1682, 2112
HaeIII	GGCC	8 cut(s)	61, 344, 698, 1164, 1253, 1477, 1586, 2056
HapII	CCGG	8 cut(s)	62, 281, 380, 398, 415, 425, 641, 1568
HgaI	GACGC	2 cut(s)	467, 621
HhaI	GCGC	3 cut(s)	272, 466, 748
Hin1I	GRCGYC	1 cut(s)	632
Hin6I	GCGC	3 cut(s)	270, 464, 746
HinP1I	GCGC	3 cut(s)	270, 464, 746
HindIII	AAGCTT	6 cut(s)	351, 524, 756, 810, 1190, 1466
HpaII	CCGG	8 cut(s)	62, 281, 380, 398, 415, 425, 641, 1568
HphI	GGTGA	2 cut(s)	1284, 1536
Hpy166II	GTNNAC	4 cut(s)	286, 730, 820, 1544
Hpy188III	TCNNGA	8 cut(s)	481, 592, 966, 1112, 1462, 1607, 1951, 2091
Hpy8I	GTNNAC	4 cut(s)	286, 730, 820, 1544
Hpy99I	CGWCG	2 cut(s)	298, 461
HpyCH4III	ACNGT	3 cut(s)	224, 599, 1396
HpyCH4IV	ACGT	4 cut(s)	114, 296, 336, 1402
HpyF3I	CTNAG	8 cut(s)	183, 1032, 1284, 1428, 1805, 1993, 2121, 2277
HpySE526I	ACGT	4 cut(s)	114, 296, 336, 1402
Hsp92I	GRCGYC	1 cut(s)	632
HspAI	GCGC	3 cut(s)	270, 464, 746
Ksp22I	TGATCA	1 cut(s)	958
KspI	CCGCGG	1 cut(s)	59
Kzo9I	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
LguI	GCTCTTC	1 cut(s)	1650
LmnI	GCTCC	9 cut(s)	55, 283, 309, 427, 514, 943, 1321, 1522, 1597
Lsp1109I	GCAGC	5 cut(s)	34, 313, 693, 1130, 1858
MaeI	CTAG	6 cut(s)	867, 1046, 1752, 2210, 2231, 2422
MaeII	ACGT	4 cut(s)	114, 296, 336, 1402
MaeIII	GTNAC	7 cut(s)	178, 202, 329, 633, 1048, 1139, 1290
MalI	GATC	8 cut(s)	230, 960, 1029, 1108, 1639, 2033, 2350, 2367
MboI	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
MfeI	CAATTG	1 cut(s)	977
MflI	RGATCY	1 cut(s)	1106
MhlI	GDGCHC	4 cut(s)	177, 822, 940, 1255
MlsI	TGGCCA	1 cut(s)	1477
MluCI	AATT	9 cut(s)	310, 490, 977, 1269, 1407, 1529, 1829, 1933, 1961
MluNI	TGGCCA	1 cut(s)	1477
MlyI	GAGTC	6 cut(s)	337, 586, 1201, 1742, 1985, 2083
MmeI	TCCRAC	6 cut(s)	560, 769, 965, 1075, 1343, 2290
Mox20I	TGGCCA	1 cut(s)	1477
Mph1103I	ATGCAT	1 cut(s)	549
MroXI	GAANNNNTTC	1 cut(s)	587
MscI	TGGCCA	1 cut(s)	1477
MseI	TTAA	4 cut(s)	528, 1470, 1976, 2028
MslI	CAYNNNNRTG	3 cut(s)	185, 1008, 1246
Msp20I	TGGCCA	1 cut(s)	1477
MspA1I	CMGCKG	3 cut(s)	58, 508, 1121
MspI	CCGG	8 cut(s)	62, 281, 380, 398, 415, 425, 641, 1568
MspR9I	CCNGG	6 cut(s)	215, 380, 416, 1981, 2386, 2409
MunI	CAATTG	1 cut(s)	977
Mva1269I	GAATGC	2 cut(s)	132, 2405
MvaI	CCWGG	4 cut(s)	215, 1981, 2386, 2409
MvnI	CGCG	4 cut(s)	58, 249, 272, 461
NciI	CCSGG	2 cut(s)	380, 416
NcoI	CCATGG	1 cut(s)	1502
NdeII	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
NlaIV	GGNNCC	4 cut(s)	279, 1253, 1611, 1905
NmeAIII	GCCGAG	3 cut(s)	674, 722, 2179
NmuCI	GTSAC	5 cut(s)	178, 202, 329, 633, 1290
NsiI	ATGCAT	1 cut(s)	549
NspI	RCATGY	1 cut(s)	1517
NspV	TTCGAA	1 cut(s)	1772
PaeI	GCATGC	1 cut(s)	1517
PagI	TCATGA	2 cut(s)	1111, 1461
PceI	AGGCCT	1 cut(s)	2056
PciSI	GCTCTTC	1 cut(s)	1650
PcsI	WCGNNNNNNNCGW	1 cut(s)	269
PctI	GAATGC	2 cut(s)	132, 2405
PdmI	GAANNNNTTC	1 cut(s)	587
PfeI	GAWTC	4 cut(s)	649, 1454, 1625, 2117
Pfl23II	CGTACG	1 cut(s)	75
PflMI	CCANNNNNTGG	1 cut(s)	1261
PfoI	TCCNGGA	2 cut(s)	414, 2384
PkrI	GCNGC	9 cut(s)	49, 57, 60, 303, 463, 708, 711, 1120, 1873
PleI	GAGTC	6 cut(s)	336, 585, 1201, 1742, 1985, 2082
PpsI	GAGTC	6 cut(s)	336, 585, 1201, 1742, 1985, 2082
Ppu21I	YACGTR	2 cut(s)	337, 1403
PpuMI	RGGWCCY	2 cut(s)	469, 1553
PsiI	TTATAA	1 cut(s)	1812
Psp124BI	GAGCTC	2 cut(s)	177, 940
Psp5II	RGGWCCY	2 cut(s)	469, 1553
Psp6I	CCWGG	4 cut(s)	213, 1979, 2384, 2407
PspFI	CCCAGC	1 cut(s)	1254
PspGI	CCWGG	4 cut(s)	213, 1979, 2384, 2407
PspLI	CGTACG	1 cut(s)	75
PspN4I	GGNNCC	4 cut(s)	279, 1253, 1611, 1905
PspOMI	GGGCCC	1 cut(s)	1251
PspPI	GGNCC	6 cut(s)	166, 244, 469, 1251, 1252, 1553
PspPPI	RGGWCCY	2 cut(s)	469, 1553
PstNI	CAGNNNCTG	1 cut(s)	472
PsuI	RGATCY	1 cut(s)	1106
RsaI	GTAC	8 cut(s)	77, 320, 377, 1389, 1401, 1792, 2129, 2293
RsaNI	GTAC	8 cut(s)	76, 319, 376, 1388, 1400, 1791, 2128, 2292
RseI	CAYNNNNRTG	3 cut(s)	185, 1008, 1246
SacI	GAGCTC	2 cut(s)	177, 940
SacII	CCGCGG	1 cut(s)	59
SapI	GCTCTTC	1 cut(s)	1650
SaqAI	TTAA	4 cut(s)	528, 1470, 1976, 2028
SatI	GCNGC	9 cut(s)	48, 56, 59, 302, 462, 707, 710, 1119, 1872
Sau3AI	GATC	8 cut(s)	228, 958, 1027, 1106, 1637, 2031, 2348, 2365
Sau96I	GGNCC	6 cut(s)	166, 244, 469, 1251, 1252, 1553
ScaI	AGTACT	1 cut(s)	1792
SchI	GAGTC	6 cut(s)	337, 586, 1201, 1742, 1985, 2083
ScrFI	CCNGG	6 cut(s)	215, 380, 416, 1981, 2386, 2409
SduI	GDGCHC	4 cut(s)	177, 822, 940, 1255
SfcI	CTRYAG	2 cut(s)	1548, 1614
Sfr303I	CCGCGG	1 cut(s)	59
SfuI	TTCGAA	1 cut(s)	1772
SgrBI	CCGCGG	1 cut(s)	59
SinI	GGWCC	4 cut(s)	166, 244, 469, 1553
SmiMI	CAYNNNNRTG	3 cut(s)	185, 1008, 1246
SmlI	CTYRAG	6 cut(s)	236, 479, 614, 807, 1055, 1166
SmoI	CTYRAG	6 cut(s)	236, 479, 614, 807, 1055, 1166
SnaBI	TACGTA	1 cut(s)	1403
SpeI	ACTAGT	1 cut(s)	1045
SphI	GCATGC	1 cut(s)	1517
Sse9I	AATT	9 cut(s)	310, 490, 977, 1269, 1407, 1529, 1829, 1933, 1961
SseBI	AGGCCT	1 cut(s)	2056
SsiI	CCGC	9 cut(s)	53, 56, 58, 211, 247, 461, 508, 710, 1121
SspMI	CTAG	6 cut(s)	867, 1046, 1752, 2210, 2231, 2422
SstI	GAGCTC	2 cut(s)	177, 940
StuI	AGGCCT	1 cut(s)	2056
StyD4I	CCNGG	6 cut(s)	213, 378, 414, 1979, 2384, 2407
StyI	CCWWGG	2 cut(s)	1502, 2209
TaaI	ACNGT	3 cut(s)	224, 599, 1396
TaiI	ACGT	4 cut(s)	117, 299, 339, 1405
TaqI	TCGA	6 cut(s)	227, 387, 495, 1384, 1772, 2244
TasI	AATT	9 cut(s)	310, 490, 977, 1269, 1407, 1529, 1829, 1933, 1961
TatI	WGTACW	4 cut(s)	1387, 1790, 2127, 2291
TauI	GCSGC	4 cut(s)	58, 61, 464, 712
TfiI	GAWTC	4 cut(s)	649, 1454, 1625, 2117
Tru1I	TTAA	4 cut(s)	528, 1470, 1976, 2028
Tru9I	TTAA	4 cut(s)	528, 1470, 1976, 2028
TscAI	CASTG	5 cut(s)	642, 1165, 1330, 1723, 2304
TseFI	GTSAC	5 cut(s)	178, 202, 329, 633, 1290
TseI	GCWGC	5 cut(s)	47, 301, 706, 1118, 1871
Tsp45I	GTSAC	5 cut(s)	178, 202, 329, 633, 1290
TspDTI	ATGAA	8 cut(s)	992, 1236, 1478, 1839, 1881, 1926, 2148, 2208
TspGWI	ACGGA	2 cut(s)	158, 278
TspRI	CASTG	5 cut(s)	642, 1165, 1330, 1723, 2304
Van91I	CCANNNNNTGG	1 cut(s)	1261
VneI	GTGCAC	1 cut(s)	818
VpaK11BI	GGWCC	4 cut(s)	166, 244, 469, 1553
XapI	RAATTY	3 cut(s)	1407, 1933, 1961
XceI	RCATGY	1 cut(s)	1517
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1262
XmaJI	CCTAGG	1 cut(s)	2209
XmnI	GAANNNNTTC	1 cut(s)	587
XspI	CTAG	6 cut(s)	867, 1046, 1752, 2210, 2231, 2422
ZrmI	AGTACT	1 cut(s)	1792
Zsp2I	ATGCAT	1 cut(s)	549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.