Rorug06G0363300
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
51134542 .. 51136857
2316 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0363300.1

Sequence Viewer

Length: 330 bp
ATGCCCTATTCAACTCAAACCCTTGTTTTCTCCCATAGACCCTCTTTCTCTTTCTCTTTCTCTTTGATCTCGATGTCACCCACCAGATTGAGTTTTGAAGTTGGCGGCCACTGGGTTGACCCGGATTTAGGGATTATTTTGTTTTGGGTATCTCAATTCAGTCTCCTCTCTTATCGAACCCGATTCAACAGTCGAGCTGGTGTCCGCCTCGTTGGACAGCGTGCGAAGCACTTAATTGAAGCAGCAGTAGCAACATATTCCCCTCCACCTCTGTCGCTCAATCTGATGAATATGATTGCAGGTTCTCAAAATATGGTGGGGAGGTGGTAA

Protein Analysis

109

Amino Acids

12.27

Weight (kDa)

10.83

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 290
AciI CCGC 2 cut(s) 105, 205
AcoI YGGCCR 1 cut(s) 106
AfiI CCNNNNNNNGG 1 cut(s) 128
AgsI TTSAA 4 cut(s) 12, 98, 187, 239
AluBI AGCT 1 cut(s) 197
AluI AGCT 1 cut(s) 197
Alw26I GTCTC 1 cut(s) 167
AoxI GGCC 1 cut(s) 106
ApeKI GCWGC 1 cut(s) 242
AsuC2I CCSGG 1 cut(s) 122
AsuHPI GGTGA 1 cut(s) 69
BbvI GCAGC 1 cut(s) 254
BcnI CCSGG 1 cut(s) 122
BcoDI GTCTC 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 290
BisI GCNGC 2 cut(s) 106, 243
BlsI GCNGC 2 cut(s) 107, 244
Bme1390I CCNGG 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 122
BmrI ACTGGG 1 cut(s) 121
BmuI ACTGGG 1 cut(s) 121
BpuMI CCSGG 1 cut(s) 122
Bsc4I CCNNNNNNNGG 1 cut(s) 128
Bse1I ACTGG 1 cut(s) 116
BseLI CCNNNNNNNGG 1 cut(s) 128
BseNI ACTGG 1 cut(s) 116
BseRI GAGGAG 1 cut(s) 155
BseXI GCAGC 1 cut(s) 254
BshFI GGCC 1 cut(s) 108
BsiSI CCGG 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 128
BsmAI GTCTC 1 cut(s) 167
BsnI GGCC 1 cut(s) 108
Bsp143I GATC 1 cut(s) 66
BspACI CCGC 2 cut(s) 105, 205
BspANI GGCC 1 cut(s) 108
BspMI ACCTGC 1 cut(s) 290
BsrI ACTGG 1 cut(s) 116
BssMI GATC 1 cut(s) 66
Bst4CI ACNGT 1 cut(s) 191
BstC8I GCNNGC 1 cut(s) 222
BstKTI GATC 1 cut(s) 69
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 1 cut(s) 66
BstMWI GCNNNNNNNGC 2 cut(s) 226, 248
BstSCI CCNGG 1 cut(s) 120
BstV1I GCAGC 1 cut(s) 254
BsuRI GGCC 1 cut(s) 108
BtsIMutI CAGTG 1 cut(s) 109
BveI ACCTGC 1 cut(s) 290
Cac8I GCNNGC 1 cut(s) 222
CviJI RGCY 2 cut(s) 108, 197
CviKI_1 RGCY 2 cut(s) 108, 197
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
EaeI YGGCCR 1 cut(s) 106
EciI GGCGGA 1 cut(s) 194
FaiI YATR 4 cut(s) 36, 256, 293, 314
Fnu4HI GCNGC 2 cut(s) 106, 243
Fsp4HI GCNGC 2 cut(s) 106, 243
GluI GCNGC 2 cut(s) 106, 243
HaeIII GGCC 1 cut(s) 108
HapII CCGG 1 cut(s) 122
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HinfI GANTC 1 cut(s) 183
HpaII CCGG 1 cut(s) 122
HphI GGTGA 1 cut(s) 69
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 1 cut(s) 285
Hpy188III TCNNGA 1 cut(s) 70
Hpy8I GTNNAC 1 cut(s) 118
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4V TGCA 1 cut(s) 299
HpyF10VI GCNNNNNNNGC 2 cut(s) 226, 248
Kzo9I GATC 1 cut(s) 66
LpnPI CCDG 5 cut(s) 97, 97, 135, 183, 285
Lsp1109I GCAGC 1 cut(s) 254
MaeIII GTNAC 1 cut(s) 75
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MluCI AATT 2 cut(s) 155, 234
MmeI TCCRAC 1 cut(s) 193
MnlI CCTC 6 cut(s) 52, 176, 218, 273, 279, 315
MseI TTAA 1 cut(s) 233
MspI CCGG 1 cut(s) 122
MspR9I CCNGG 1 cut(s) 122
MwoI GCNNNNNNNGC 2 cut(s) 226, 248
NciI CCSGG 1 cut(s) 122
NdeII GATC 1 cut(s) 66
NmuCI GTSAC 1 cut(s) 75
PfeI GAWTC 1 cut(s) 183
PkrI GCNGC 2 cut(s) 107, 244
SaqAI TTAA 1 cut(s) 233
SatI GCNGC 2 cut(s) 106, 243
Sau3AI GATC 1 cut(s) 66
ScrFI CCNGG 1 cut(s) 122
SetI ASST 4 cut(s) 199, 271, 304, 326
Sse9I AATT 2 cut(s) 155, 234
SsiI CCGC 2 cut(s) 105, 205
StyD4I CCNGG 1 cut(s) 120
TaaI ACNGT 1 cut(s) 191
TaqI TCGA 3 cut(s) 71, 175, 193
TasI AATT 2 cut(s) 155, 234
TauI GCSGC 1 cut(s) 108
TfiI GAWTC 1 cut(s) 183
Tru1I TTAA 1 cut(s) 233
Tru9I TTAA 1 cut(s) 233
TscAI CASTG 1 cut(s) 116
TseFI GTSAC 1 cut(s) 75
TseI GCWGC 1 cut(s) 242
Tsp45I GTSAC 1 cut(s) 75
TspDTI ATGAA 1 cut(s) 302
TspRI CASTG 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.