Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004279

Physical Location & Seq

Genomic Coordinates Reverse (-)

51124924 .. 51127616

Gene Structure 2693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0363200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGGGTCCTCGGAACAGTACCGGCCGCTACTCCTCGGACTCGACTCACATTCCCGGATTCCTGACTTGTCATCCGTCGCGATTGAAGAATTTCTGGAGCAAAGGCCTATAGCATTGAGGTGGTGGCCTAGGCTAGTGGCATGGGAGTCGAGACTGCTATGGATTTTATCCGGTGCGTCTATTCTAGTTTCGGTTTTCAATTACATGCTCAGCTTTGTCACGCTTATGTTCTGTGGCCATCTGAGTTCATTGGAGCTTGCTGGAGCCTCTATTGCAAGTGTGGGAATCCAAGGTCTTGCTTATGGGATTATGTTGGGCATGGCGAGTGCTGTACAAACTGTTTGTGGGCAAGCCTATGGAGCCAAACACTTGGGAGCAATGGGGATCATATGCCAAAGAGCAATCGTCTTGCACTTGGGAGCAGCAGTCCTCCTTACATTTTTGTACTGGTGGTCAGGTCCATTACTTGTAGCCATGGGCCAATCAGAAAGCATAGCAGAACAGGGTCAAATCTTTGCGCGTGGTTTAATCCCTCAACTCTATGCATTTGCCATAAACTGCCCACAACAGAGGTTCCTCCAGGCACAGAACATAGTGAACCCTTTGGCATACATGTCCATTGGAGTTTTCCTCCTTCACACTCTTCTCACTTGGGTGGTGGTTTATGTAGTGGACTATGGACTAATAGGTGCTGCTCTTACACTGAGCTTTTCTTGGTATTTGCTTGTGATTACAAATGGGATTTACATTCTCGTAAGCCCCAACTGCAAGGAAACTTGGACTGGTTTCTCATGGAAAGCGTTTTCTGGAATGTGGCCTTATTTTAAGCTAACTATTGCTTCTGCTGTCATGTTGTGTTTGGAAATTTGGTACTCTCAAGGGTTAGTGCTTATCTCAGGGCTCCTACCCGACCCTACAATCTCACTGGACTCCATTTCTATCTGCATGAACTACTTGAACTGGGACATGCAATTTATGCTAGGTCTTGCTGCTGCAGCAAGTGTTCGAGTGAGTAATGAACTAGGTGCTGGTAATCCAAAGGTGGCCAAATTTTCGGTGTTTGTAGTGAACGGGACCAGCATCCTGATTAGCATAGTGTTCAGTGCTATTGTGCTGATATTCAAAGTTGGATTGAGCAAGCTATTTACAAGTGACGACGATGTTATTGAAGCAGTGTCTAATTTGACCCCCTTGCTAGCCATCTCTGTTTTCTTGAATGGCATTCAACCTATACTCTCAGGTGTGGCAATTGGAAGTGGATGGCAAGCTGTTGTAGCTTATGTGAACCTGTCTTGTTACTACGTTATCGGTCTTCCAATTGCGTGTGTTCTTGGCTTTAAAACTAGTATGGGAGTAGAAGGTATTTGGTGGGGGATGGTTATTGGAGTATTTTTACAGACAGTAACTCTAATTGTTCTCACTGCCAGAACCAATTGGGATGCTGAGGTTGTAAACGCGGCTGAGAGATTGAGGACATCTGCAAATGTAGAACAGTTGCTCTTGGTGGATGACGACGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023056 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0097306 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1903506 GO:1905957 GO:1905959 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

506

Amino Acids

55.07

Weight (kDa)

5.27

Isoelectric Point (pI)

24.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	60 - 219	4.4e-28	MatE
MatE	PF01554	281 - 441	4.6e-28	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004279)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45249 AT1G45249 AT1G45249 AT1G45249 AT1G45249 AT1G45249 AT1G45249 AT1G45249 AT1G45249 AT1G45249
fragaria_vesca	FvH4_2g34330 FvH4_2g34330 FvH4_2g34330 FvH4_2g34330 FvH4_2g34330
malus_domestica	MD08G1099600.v1.1 MD15G1081800.v1.1
prunus_persica	Prupe.1G434500_v2.0.a1
pyrus_communis	pycom08g08090
rosa_chinensis	RchiOBHm_Chr6g0308031
rosa_laevigata	RLG00000010674
rosa_multiflora	Rmu_co8058166.1_g000001 Rmu_ssc0000005.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160660
rosa_rugosa	Rorug06G0363200 Rorug06G0363300 Rorug06G0363300
rosa_samantha	Rh6AG472100 Rh6BG483000 Rh6CG488200 Rh6DG474400
rosa_wichuraiana	Rw6G041200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	80, 520, 1457
AciI	CCGC	2 cut(s)	26, 1457
AclWI	GGATC	1 cut(s)	392
AcoI	YGGCCR	3 cut(s)	23, 235, 1044
AcsI	RAATTY	3 cut(s)	89, 864, 1049
AfaI	GTAC	4 cut(s)	20, 333, 446, 872
AflIII	ACRYGT	1 cut(s)	612
AgsI	TTSAA	7 cut(s)	86, 199, 958, 1123, 1169, 1216, 1226
AhlI	ACTAGT	1 cut(s)	1343
AjnI	CCWGG	1 cut(s)	579
AleI	CACNNNNGTG	1 cut(s)	653
AluBI	AGCT	7 cut(s)	213, 256, 708, 829, 1141, 1268, 1277
AluI	AGCT	7 cut(s)	213, 256, 708, 829, 1141, 1268, 1277
Alw26I	GTCTC	1 cut(s)	145
AlwI	GGATC	1 cut(s)	392
AoxI	GGCC	7 cut(s)	23, 104, 125, 235, 478, 815, 1044
ApeKI	GCWGC	5 cut(s)	422, 692, 989, 992, 995
ApoI	RAATTY	3 cut(s)	89, 864, 1049
Asp700I	GAANNNNTTC	1 cut(s)	90
AspA2I	CCTAGG	1 cut(s)	128
AspLEI	GCGC	1 cut(s)	520
AspS9I	GGNCC	4 cut(s)	6, 458, 478, 1074
AsuC2I	CCSGG	1 cut(s)	55
AsuNHI	GCTAGC	1 cut(s)	1195
AvaII	GGWCC	3 cut(s)	6, 458, 1074
AvrII	CCTAGG	1 cut(s)	128
BalI	TGGCCA	2 cut(s)	237, 1046
BanII	GRGCYC	1 cut(s)	903
BbsI	GAAGAC	1 cut(s)	1304
BbvCI	CCTCAGC	1 cut(s)	1443
BbvI	GCAGC	5 cut(s)	434, 679, 976, 979, 1007
BccI	CCATC	4 cut(s)	246, 1208, 1254, 1369
BcgI	CGANNNNNNTGC	2 cut(s)	129, 163
BciT130I	CCWGG	1 cut(s)	581
BcnI	CCSGG	1 cut(s)	55
BcoDI	GTCTC	1 cut(s)	145
BcuI	ACTAGT	1 cut(s)	1343
BfaI	CTAG	7 cut(s)	129, 134, 185, 980, 1022, 1196, 1344
BfmI	CTRYAG	2 cut(s)	108, 993
BisI	GCNGC	7 cut(s)	26, 423, 693, 990, 993, 996, 1458
BlnI	CCTAGG	1 cut(s)	128
BlpI	GCTNAGC	1 cut(s)	209
BlsI	GCNGC	7 cut(s)	27, 424, 694, 991, 994, 997, 1459
Bme1390I	CCNGG	2 cut(s)	55, 581
Bme18I	GGWCC	3 cut(s)	6, 458, 1074
BmgT120I	GGNCC	4 cut(s)	6, 458, 478, 1074
BmiI	GGNNCC	6 cut(s)	7, 265, 361, 575, 902, 1075
BmrFI	CCNGG	2 cut(s)	55, 581
BmrI	ACTGGG	1 cut(s)	970
BmsI	GCATC	2 cut(s)	1089, 1429
BmtI	GCTAGC	1 cut(s)	1199
BmuI	ACTGGG	1 cut(s)	970
BpiI	GAAGAC	1 cut(s)	1304
BplI	GAGNNNNNCTC	2 cut(s)	615, 647
BpmI	CTGGAG	3 cut(s)	116, 282, 563
Bpu10I	CCTNAGC	1 cut(s)	1443
Bpu1102I	GCTNAGC	1 cut(s)	209
BpuEI	CTTGAG	1 cut(s)	861
BpuMI	CCSGG	1 cut(s)	55
BsaJI	CCNNGG	5 cut(s)	9, 34, 128, 289, 474
BsaWI	WCCGGW	1 cut(s)	170
BsaXI	ACNNNNNCTCC	2 cut(s)	411, 441
Bse118I	RCCGGY	1 cut(s)	21
Bse1I	ACTGG	4 cut(s)	452, 787, 930, 965
Bse3DI	GCAATG	1 cut(s)	384
BseBI	CCWGG	1 cut(s)	581
BseDI	CCNNGG	5 cut(s)	9, 34, 128, 289, 474
BseGI	GGATG	6 cut(s)	71, 1080, 1265, 1380, 1444, 1513
BseMI	GCAATG	1 cut(s)	384
BseMII	CTCAG	7 cut(s)	223, 233, 695, 909, 1251, 1434, 1452
BseNI	ACTGG	4 cut(s)	452, 787, 930, 965
BseRI	GAGGAG	1 cut(s)	23
BseX3I	CGGCCG	1 cut(s)	23
BseXI	GCAGC	5 cut(s)	434, 679, 976, 979, 1007
Bsh1236I	CGCG	3 cut(s)	80, 520, 1457
Bsh1285I	CGRYCG	1 cut(s)	26
BshFI	GGCC	7 cut(s)	25, 106, 127, 237, 480, 817, 1046
BsiEI	CGRYCG	1 cut(s)	26
BsiSI	CCGG	3 cut(s)	22, 55, 171
BslFI	GGGAC	2 cut(s)	977, 1087
BsmAI	GTCTC	1 cut(s)	145
BsmFI	GGGAC	2 cut(s)	977, 1087
BsmI	GAATGC	1 cut(s)	1221
BsnI	GGCC	7 cut(s)	25, 106, 127, 237, 480, 817, 1046
Bsp1286I	GDGCHC	1 cut(s)	903
Bsp1407I	TGTACA	1 cut(s)	331
Bsp143I	GATC	1 cut(s)	384
Bsp1720I	GCTNAGC	1 cut(s)	209
Bsp19I	CCATGG	1 cut(s)	474
Bsp68I	TCGCGA	1 cut(s)	80
BspACI	CCGC	2 cut(s)	26, 1457
BspANI	GGCC	7 cut(s)	25, 106, 127, 237, 480, 817, 1046
BspCNI	CTCAG	7 cut(s)	222, 234, 696, 908, 1250, 1435, 1453
BspFNI	CGCG	3 cut(s)	80, 520, 1457
BspLI	GGNNCC	6 cut(s)	7, 265, 361, 575, 902, 1075
BspMAI	CTGCAG	1 cut(s)	997
BspOI	GCTAGC	1 cut(s)	1199
BspPI	GGATC	1 cut(s)	392
BsrDI	GCAATG	1 cut(s)	384
BsrFI	RCCGGY	1 cut(s)	21
BsrGI	TGTACA	1 cut(s)	331
BsrI	ACTGG	4 cut(s)	452, 787, 930, 965
BssAI	RCCGGY	1 cut(s)	21
BssECI	CCNNGG	5 cut(s)	9, 34, 128, 289, 474
BssMI	GATC	1 cut(s)	384
BssT1I	CCWWGG	3 cut(s)	128, 289, 474
Bst2UI	CCWGG	1 cut(s)	581
Bst4CI	ACNGT	4 cut(s)	18, 340, 1402, 1494
Bst6I	CTCTTC	1 cut(s)	648
BstAPI	GCANNNNNTGC	1 cut(s)	976
BstAUI	TGTACA	1 cut(s)	331
BstC8I	GCNNGC	5 cut(s)	258, 351, 1139, 1197, 1266
BstDEI	CTNAG	7 cut(s)	209, 242, 704, 895, 1237, 1443, 1461
BstDSI	CCRYGG	1 cut(s)	474
BstF5I	GGATG	6 cut(s)	71, 1080, 1265, 1380, 1444, 1513
BstFNI	CGCG	3 cut(s)	80, 520, 1457
BstHHI	GCGC	1 cut(s)	520
BstKTI	GATC	1 cut(s)	387
BstMAI	GTCTC	1 cut(s)	145
BstMBI	GATC	1 cut(s)	384
BstMCI	CGRYCG	1 cut(s)	26
BstMWI	GCNNNNNNNGC	6 cut(s)	272, 359, 765, 976, 995, 1274
BstNI	CCWGG	1 cut(s)	581
BstNSI	RCATGY	3 cut(s)	208, 616, 970
BstSCI	CCNGG	2 cut(s)	53, 579
BstSFI	CTRYAG	2 cut(s)	108, 993
BstUI	CGCG	3 cut(s)	80, 520, 1457
BstV1I	GCAGC	5 cut(s)	434, 679, 976, 979, 1007
BstV2I	GAAGAC	1 cut(s)	1304
BstXI	CCANNNNNNTGG	1 cut(s)	370
BstZI	CGGCCG	1 cut(s)	23
BsuRI	GGCC	7 cut(s)	25, 106, 127, 237, 480, 817, 1046
BtgI	CCRYGG	1 cut(s)	474
BtsCI	GGATG	6 cut(s)	71, 1080, 1265, 1380, 1444, 1513
BtsI	GCAGTG	2 cut(s)	1179, 1419
BtsIMutI	CAGTG	5 cut(s)	701, 923, 1108, 1179, 1419
BtuMI	TCGCGA	1 cut(s)	80
Cac8I	GCNNGC	5 cut(s)	258, 351, 1139, 1197, 1266
CfoI	GCGC	1 cut(s)	520
Cfr10I	RCCGGY	1 cut(s)	21
Cfr13I	GGNCC	4 cut(s)	6, 458, 478, 1074
CseI	GACGC	1 cut(s)	165
Csp6I	GTAC	4 cut(s)	19, 332, 445, 871
CviAII	CATG	9 cut(s)	141, 205, 319, 475, 613, 792, 850, 946, 967
CviQI	GTAC	4 cut(s)	19, 332, 445, 871
DdeI	CTNAG	7 cut(s)	209, 242, 704, 895, 1237, 1443, 1461
DpnI	GATC	1 cut(s)	386
DpnII	GATC	1 cut(s)	384
DraI	TTTAAA	1 cut(s)	1339
EaeI	YGGCCR	3 cut(s)	23, 235, 1044
EagI	CGGCCG	1 cut(s)	23
Eam1104I	CTCTTC	1 cut(s)	648
EarI	CTCTTC	1 cut(s)	648
EclXI	CGGCCG	1 cut(s)	23
Eco130I	CCWWGG	3 cut(s)	128, 289, 474
Eco147I	AGGCCT	1 cut(s)	106
Eco24I	GRGCYC	1 cut(s)	903
Eco47I	GGWCC	3 cut(s)	6, 458, 1074
Eco52I	CGGCCG	1 cut(s)	23
EcoO109I	RGGNCCY	1 cut(s)	6
EcoRII	CCWGG	1 cut(s)	579
EcoT14I	CCWWGG	3 cut(s)	128, 289, 474
EcoT22I	ATGCAT	1 cut(s)	547
EcoT38I	GRGCYC	1 cut(s)	903
ErhI	CCWWGG	3 cut(s)	128, 289, 474
FaeI	CATG	9 cut(s)	144, 208, 322, 478, 616, 795, 853, 949, 970
FaqI	GGGAC	2 cut(s)	977, 1087
FatI	CATG	9 cut(s)	140, 204, 318, 474, 612, 791, 849, 945, 966
FauNDI	CATATG	1 cut(s)	389
Fnu4HI	GCNGC	7 cut(s)	26, 423, 693, 990, 993, 996, 1458
FokI	GGATG	5 cut(s)	58, 1067, 1272, 1387, 1451
FriOI	GRGCYC	1 cut(s)	903
Fsp4HI	GCNGC	7 cut(s)	26, 423, 693, 990, 993, 996, 1458
FspBI	CTAG	7 cut(s)	129, 134, 185, 980, 1022, 1196, 1344
GlaI	GCGC	1 cut(s)	519
GluI	GCNGC	7 cut(s)	26, 423, 693, 990, 993, 996, 1458
GsuI	CTGGAG	3 cut(s)	116, 282, 563
HaeIII	GGCC	7 cut(s)	25, 106, 127, 237, 480, 817, 1046
HapII	CCGG	3 cut(s)	22, 55, 171
HgaI	GACGC	1 cut(s)	165
HhaI	GCGC	1 cut(s)	520
Hin1II	CATG	9 cut(s)	144, 208, 322, 478, 616, 795, 853, 949, 970
Hin6I	GCGC	1 cut(s)	518
HinP1I	GCGC	1 cut(s)	518
HinfI	GANTC	6 cut(s)	39, 44, 58, 146, 285, 929
HpaII	CCGG	3 cut(s)	22, 55, 171
Hpy166II	GTNNAC	5 cut(s)	598, 673, 1069, 1285, 1453
Hpy188I	TCNGA	4 cut(s)	13, 38, 243, 487
Hpy188III	TCNNGA	7 cut(s)	62, 79, 95, 150, 807, 1084, 1213
Hpy8I	GTNNAC	5 cut(s)	598, 673, 1069, 1285, 1453
Hpy99I	CGWCG	3 cut(s)	80, 1160, 1517
HpyAV	CCTTC	2 cut(s)	644, 1352
HpyCH4III	ACNGT	4 cut(s)	18, 340, 1402, 1494
HpyCH4IV	ACGT	2 cut(s)	1302, 1515
HpyCH4V	TGCA	8 cut(s)	275, 412, 545, 768, 945, 970, 995, 1481
HpyF10VI	GCNNNNNNNGC	6 cut(s)	272, 359, 765, 976, 995, 1274
HpyF3I	CTNAG	7 cut(s)	209, 242, 704, 895, 1237, 1443, 1461
HpySE526I	ACGT	2 cut(s)	1302, 1515
Hsp92II	CATG	9 cut(s)	144, 208, 322, 478, 616, 795, 853, 949, 970
HspAI	GCGC	1 cut(s)	518
Kzo9I	GATC	1 cut(s)	384
LmnI	GCTCC	7 cut(s)	97, 253, 263, 359, 374, 419, 906
Lsp1109I	GCAGC	5 cut(s)	434, 679, 976, 979, 1007
LweI	GCATC	2 cut(s)	1089, 1429
MaeI	CTAG	7 cut(s)	129, 134, 185, 980, 1022, 1196, 1344
MaeII	ACGT	2 cut(s)	1302, 1515
MaeIII	GTNAC	4 cut(s)	217, 1151, 1295, 1402
MalI	GATC	1 cut(s)	386
MboI	GATC	1 cut(s)	384
MboII	GAAGA	3 cut(s)	98, 635, 1304
MfeI	CAATTG	3 cut(s)	1248, 1317, 1432
MhlI	GDGCHC	1 cut(s)	903
MlsI	TGGCCA	2 cut(s)	237, 1046
MluNI	TGGCCA	2 cut(s)	237, 1046
MlyI	GAGTC	4 cut(s)	33, 38, 155, 923
MmeI	TCCRAC	1 cut(s)	1108
Mox20I	TGGCCA	2 cut(s)	237, 1046
Mph1103I	ATGCAT	1 cut(s)	547
MroXI	GAANNNNTTC	1 cut(s)	90
MscI	TGGCCA	2 cut(s)	237, 1046
MseI	TTAA	3 cut(s)	527, 825, 1338
MslI	CAYNNNNRTG	3 cut(s)	118, 224, 653
Msp20I	TGGCCA	2 cut(s)	237, 1046
MspI	CCGG	3 cut(s)	22, 55, 171
MspR9I	CCNGG	2 cut(s)	55, 581
MunI	CAATTG	3 cut(s)	1248, 1317, 1432
Mva1269I	GAATGC	1 cut(s)	1221
MvaI	CCWGG	1 cut(s)	581
MvnI	CGCG	3 cut(s)	80, 520, 1457
MwoI	GCNNNNNNNGC	6 cut(s)	272, 359, 765, 976, 995, 1274
NciI	CCSGG	1 cut(s)	55
NcoI	CCATGG	1 cut(s)	474
NdeI	CATATG	1 cut(s)	389
NdeII	GATC	1 cut(s)	384
NheI	GCTAGC	1 cut(s)	1195
NlaIII	CATG	9 cut(s)	144, 208, 322, 478, 616, 795, 853, 949, 970
NlaIV	GGNNCC	6 cut(s)	7, 265, 361, 575, 902, 1075
NmuCI	GTSAC	2 cut(s)	217, 1151
NruI	TCGCGA	1 cut(s)	80
NsiI	ATGCAT	1 cut(s)	547
NspI	RCATGY	3 cut(s)	208, 616, 970
OliI	CACNNNNGTG	1 cut(s)	653
PceI	AGGCCT	1 cut(s)	106
PciI	ACATGT	1 cut(s)	612
PctI	GAATGC	1 cut(s)	1221
PdmI	GAANNNNTTC	1 cut(s)	90
PfeI	GAWTC	2 cut(s)	58, 285
PfoI	TCCNGGA	1 cut(s)	53
PkrI	GCNGC	7 cut(s)	27, 424, 694, 991, 994, 997, 1459
PleI	GAGTC	4 cut(s)	33, 38, 154, 923
PpsI	GAGTC	4 cut(s)	33, 38, 154, 923
PpuMI	RGGWCCY	1 cut(s)	6
PscI	ACATGT	1 cut(s)	612
Psp5II	RGGWCCY	1 cut(s)	6
Psp6I	CCWGG	1 cut(s)	579
PspGI	CCWGG	1 cut(s)	579
PspN4I	GGNNCC	6 cut(s)	7, 265, 361, 575, 902, 1075
PspPI	GGNCC	4 cut(s)	6, 458, 478, 1074
PspPPI	RGGWCCY	1 cut(s)	6
PstI	CTGCAG	1 cut(s)	997
RruI	TCGCGA	1 cut(s)	80
RsaI	GTAC	4 cut(s)	20, 333, 446, 872
RsaNI	GTAC	4 cut(s)	19, 332, 445, 871
RseI	CAYNNNNRTG	3 cut(s)	118, 224, 653
SaqAI	TTAA	3 cut(s)	527, 825, 1338
SatI	GCNGC	7 cut(s)	26, 423, 693, 990, 993, 996, 1458
Sau3AI	GATC	1 cut(s)	384
Sau96I	GGNCC	4 cut(s)	6, 458, 478, 1074
SchI	GAGTC	4 cut(s)	33, 38, 155, 923
ScrFI	CCNGG	2 cut(s)	55, 581
SduI	GDGCHC	1 cut(s)	903
SfaNI	GCATC	2 cut(s)	1089, 1429
SfcI	CTRYAG	2 cut(s)	108, 993
SinI	GGWCC	3 cut(s)	6, 458, 1074
SmiMI	CAYNNNNRTG	3 cut(s)	118, 224, 653
SmlI	CTYRAG	1 cut(s)	876
SmoI	CTYRAG	1 cut(s)	876
SpeI	ACTAGT	1 cut(s)	1343
SseBI	AGGCCT	1 cut(s)	106
SsiI	CCGC	2 cut(s)	26, 1457
SspMI	CTAG	7 cut(s)	129, 134, 185, 980, 1022, 1196, 1344
StuI	AGGCCT	1 cut(s)	106
StyD4I	CCNGG	2 cut(s)	53, 579
StyI	CCWWGG	3 cut(s)	128, 289, 474
TaaI	ACNGT	4 cut(s)	18, 340, 1402, 1494
TaiI	ACGT	2 cut(s)	1305, 1518
TaqI	TCGA	3 cut(s)	42, 149, 1006
TaqII	GACCGA	1 cut(s)	1298
TatI	WGTACW	2 cut(s)	331, 444
TauI	GCSGC	2 cut(s)	28, 1460
TfiI	GAWTC	2 cut(s)	58, 285
Tru1I	TTAA	3 cut(s)	527, 825, 1338
Tru9I	TTAA	3 cut(s)	527, 825, 1338
TscAI	CASTG	5 cut(s)	708, 930, 1108, 1179, 1426
TseFI	GTSAC	2 cut(s)	217, 1151
TseI	GCWGC	5 cut(s)	422, 692, 989, 992, 995
Tsp45I	GTSAC	2 cut(s)	217, 1151
TspDTI	ATGAA	3 cut(s)	237, 962, 1032
TspGWI	ACGGA	1 cut(s)	64
TspRI	CASTG	5 cut(s)	708, 930, 1108, 1179, 1426
VpaK11BI	GGWCC	3 cut(s)	6, 458, 1074
XapI	RAATTY	3 cut(s)	89, 864, 1049
XceI	RCATGY	3 cut(s)	208, 616, 970
XmaJI	CCTAGG	1 cut(s)	128
XmnI	GAANNNNTTC	1 cut(s)	90
XspI	CTAG	7 cut(s)	129, 134, 185, 980, 1022, 1196, 1344
Zsp2I	ATGCAT	1 cut(s)	547

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.