Rh6BG483000
BZIP Family

ABSCISIC ACID-INSENSITIVE 5-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
68822743 .. 68826766
4024 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG483000.1

Sequence Viewer

Length: 1176 bp
ATGGGTGCCAATATGAATTTCAAGGGGTTCATGACCGATCTACAAGGCGACGGCGGAGGTCGGCCACTGGTAAACAACAGCAACAACAACAACGCCTTGGCGCGGCAGTCGTCGATCTATTCCCTCACGTTTGACGAGTTACAGAACACCATGGGAGGCCCAGGTAAGGACTTTGGGTCCATGAACATGGATGAGCTCTTGAAGAGTATCTGGACGGCGGAGGAGACGCAGACTGTGGTCCCTACTGGTGGTGGTGTGGTGGTGACCGGTCAAGATGGGTTTAATCAGGGCCTGCCTCTGCAGAGACAGGGGTCGTTGACGCTGCCTCGGACGCTGAGCCAGAAGACGGTGGATGAGGTGTGGAGGAATTTGTCGTCCAAGGAAGGAAATGGTGGGTCGAATGTGGTGCAGAGGCAGCAGACTTTGGGGGAAATGACGTTGGAGGAGTTTTTGGTCAGAGCTGGGGTTGTGAGAGAAGATGGTCCAAATGGTTCAAAGCCGCCGGGTAATAATGGGAGTGGGTTTTTCGGAGAGTTGGCTCGGTTTGGGAACACTGGTGGTTTAGGATTCGGGTTTCAGCAGCCGGATCGTAGTATGGGGAGTAGTAGGATTTCGGAGAATGGTAATCAGGTTCCGAATCAGAGTTCCAATCTGCCACTGAATGCTAATGGGGTTAGAAGTCAGCAACAACAGCAGCAGCAGCAGCAGCAGATCCAAATATTTCCCAAGCAGCAACCTGTGACTTACAGCACTTCACAGATGGGTATGGGGCCGAATTCGCAGCTTGGTAGTCCTGGAATGAGGGGTGGGATTTTGGGGATTGGTGAGCAGGGTATGAGTAATGCTCTGGTTCAGAGTCCAGTGCTGCAAGGAGGAGGAGGAGGAGGAGGGATGGGAATGGTTGGATTAGGAGGTGGGAATGGTCGAGTGGCTGCAGTGTCTCCCGCGAATCAGCTGTCATCGGATGGGATTGGGAAGAGTAATGGTACTGATACGTCGTCCGTGTCACCAATGCCATATGTGTTTAACAATGGTTTTAGGGGAAGGAAAGGCGGGCCTGTGGAGAAAGTTGTTGAGAGGAGACAGAGGAGGATGATCAAGAACAGAGAGTCAGCTGCCAGATCAAGAGCTCGCAAACAGGTGAATATGTCTTTCTTTGTTTTACTGCTTTTTTAA

Protein Analysis

391

Amino Acids

41.41

Weight (kDa)

10.03

Isoelectric Point (pI)

49.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 5
AccII CGCG 2 cut(s) 103, 947
AciI CCGC 6 cut(s) 54, 103, 218, 500, 945, 1053
AclWI GGATC 2 cut(s) 594, 706
AcoI YGGCCR 1 cut(s) 62
AcsI RAATTY 3 cut(s) 16, 367, 775
AfaI GTAC 1 cut(s) 988
AfiI CCNNNNNNNGG 4 cut(s) 102, 166, 248, 346
AgeI ACCGGT 1 cut(s) 266
AgsI TTSAA 3 cut(s) 22, 202, 495
AhdI GACNNNNNGTC 1 cut(s) 175
AjnI CCWGG 2 cut(s) 160, 793
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 6 cut(s) 196, 461, 784, 955, 1115, 1130
AluI AGCT 6 cut(s) 196, 461, 784, 955, 1115, 1130
Alw21I GWGCWC 2 cut(s) 198, 1132
Alw26I GTCTC 4 cut(s) 218, 298, 945, 1075
AlwI GGATC 2 cut(s) 594, 706
AlwNI CAGNNNCTG 1 cut(s) 292
AoxI GGCC 5 cut(s) 62, 157, 289, 770, 1055
ApoI RAATTY 3 cut(s) 16, 367, 775
ArsI GACNNNNNNTTYG 2 cut(s) 941, 973
AsiGI ACCGGT 1 cut(s) 266
AspLEI GCGC 1 cut(s) 103
AspS9I GGNCC 7 cut(s) 158, 177, 238, 289, 482, 770, 1055
AsuC2I CCSGG 1 cut(s) 504
AsuHPI GGTGA 4 cut(s) 274, 836, 999, 1153
AvaII GGWCC 3 cut(s) 177, 238, 482
BanI GGYRCC 1 cut(s) 5
BanII GRGCYC 2 cut(s) 198, 1132
BbsI GAAGAC 1 cut(s) 350
Bbv12I GWGCWC 2 cut(s) 198, 1132
BccI CCATC 5 cut(s) 269, 473, 754, 886, 959
BceAI ACGGC 2 cut(s) 67, 231
BcgI CGANNNNNNTGC 4 cut(s) 388, 422, 569, 603
BciT130I CCWGG 2 cut(s) 162, 795
BclI TGATCA 1 cut(s) 1095
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 4 cut(s) 218, 298, 945, 1075
BfmI CTRYAG 2 cut(s) 299, 933
BlpI GCTNAGC 1 cut(s) 335
Bme1390I CCNGG 3 cut(s) 162, 504, 795
Bme18I GGWCC 3 cut(s) 177, 238, 482
BmeRI GACNNNNNGTC 1 cut(s) 175
BmgT120I GGNCC 7 cut(s) 158, 177, 238, 289, 482, 770, 1055
BmiI GGNNCC 5 cut(s) 7, 178, 240, 633, 771
BmrFI CCNGG 3 cut(s) 162, 504, 795
BoxI GACNNNNGTC 2 cut(s) 236, 310
BpiI GAAGAC 1 cut(s) 350
BplI GAGNNNNNCTC 2 cut(s) 829, 861
Bpu1102I GCTNAGC 1 cut(s) 335
BpuMI CCSGG 1 cut(s) 504
BsaJI CCNNGG 5 cut(s) 96, 150, 160, 326, 378
BsaWI WCCGGW 1 cut(s) 266
Bsc4I CCNNNNNNNGG 4 cut(s) 102, 166, 248, 346
Bse118I RCCGGY 1 cut(s) 266
Bse1I ACTGG 4 cut(s) 72, 250, 559, 860
BseBI CCWGG 2 cut(s) 162, 795
BseDI CCNNGG 5 cut(s) 96, 150, 160, 326, 378
BseGI GGATG 5 cut(s) 196, 358, 897, 970, 1098
BseLI CCNNNNNNNGG 4 cut(s) 102, 166, 248, 346
BseMII CTCAG 1 cut(s) 326
BseNI ACTGG 4 cut(s) 72, 250, 559, 860
BseRI GAGGAG 9 cut(s) 236, 458, 888, 891, 894, 897, 900, 1093, 1102
BseYI CCCAGC 1 cut(s) 461
BsgI GTGCAG 1 cut(s) 428
Bsh1236I CGCG 2 cut(s) 103, 947
BshFI GGCC 5 cut(s) 64, 159, 291, 772, 1057
BshNI GGYRCC 1 cut(s) 5
BshTI ACCGGT 1 cut(s) 266
BsiHKAI GWGCWC 2 cut(s) 198, 1132
BsiSI CCGG 3 cut(s) 267, 503, 584
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 4 cut(s) 102, 166, 248, 346
BsmAI GTCTC 4 cut(s) 218, 298, 945, 1075
BsmBI CGTCTC 1 cut(s) 218
BsmFI GGGAC 1 cut(s) 224
BsmI GAATGC 1 cut(s) 667
BsnI GGCC 5 cut(s) 64, 159, 291, 772, 1057
Bsp1286I GDGCHC 2 cut(s) 198, 1132
Bsp143I GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
Bsp1720I GCTNAGC 1 cut(s) 335
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 6 cut(s) 54, 103, 218, 500, 945, 1053
BspANI GGCC 5 cut(s) 64, 159, 291, 772, 1057
BspCNI CTCAG 1 cut(s) 327
BspFNI CGCG 2 cut(s) 103, 947
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 5 cut(s) 7, 178, 240, 633, 771
BspMAI CTGCAG 2 cut(s) 303, 937
BspPI GGATC 2 cut(s) 594, 706
BspT107I GGYRCC 1 cut(s) 5
BsrFI RCCGGY 1 cut(s) 266
BsrI ACTGG 4 cut(s) 72, 250, 559, 860
BssAI RCCGGY 1 cut(s) 266
BssECI CCNNGG 5 cut(s) 96, 150, 160, 326, 378
BssMI GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
BssT1I CCWWGG 3 cut(s) 96, 150, 378
Bst2UI CCWGG 2 cut(s) 162, 795
Bst4CI ACNGT 2 cut(s) 235, 349
Bst6I CTCTTC 2 cut(s) 197, 971
BstC8I GCNNGC 3 cut(s) 293, 1055, 1132
BstDEI CTNAG 1 cut(s) 335
BstDSI CCRYGG 1 cut(s) 150
BstEII GGTNACC 1 cut(s) 262
BstF5I GGATG 5 cut(s) 196, 358, 897, 970, 1098
BstFNI CGCG 2 cut(s) 103, 947
BstHHI GCGC 1 cut(s) 103
BstKTI GATC 6 cut(s) 40, 117, 589, 714, 1098, 1124
BstMAI GTCTC 4 cut(s) 218, 298, 945, 1075
BstMBI GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
BstMWI GCNNNNNNNGC 7 cut(s) 331, 415, 691, 700, 703, 706, 778
BstNI CCWGG 2 cut(s) 162, 795
BstPAI GACNNNNGTC 2 cut(s) 236, 310
BstPI GGTNACC 1 cut(s) 262
BstSCI CCNGG 3 cut(s) 160, 502, 793
BstSFI CTRYAG 2 cut(s) 299, 933
BstUI CGCG 2 cut(s) 103, 947
BstV2I GAAGAC 1 cut(s) 350
BstX2I RGATCY 1 cut(s) 711
BstXI CCANNNNNNTGG 1 cut(s) 187
BstYI RGATCY 1 cut(s) 711
BsuRI GGCC 5 cut(s) 64, 159, 291, 772, 1057
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 5 cut(s) 196, 358, 897, 970, 1098
BtsI GCAGTG 1 cut(s) 942
BtsIMutI CAGTG 5 cut(s) 65, 552, 656, 867, 942
Cac8I GCNNGC 3 cut(s) 293, 1055, 1132
CaiI CAGNNNCTG 1 cut(s) 292
CciI TCATGA 1 cut(s) 30
CfoI GCGC 1 cut(s) 103
Cfr10I RCCGGY 1 cut(s) 266
Cfr13I GGNCC 7 cut(s) 158, 177, 238, 289, 482, 770, 1055
CseI GACGC 3 cut(s) 235, 328, 340
Csp6I GTAC 1 cut(s) 987
CspAI ACCGGT 1 cut(s) 266
CviAII CATG 4 cut(s) 31, 151, 181, 187
CviQI GTAC 1 cut(s) 987
DdeI CTNAG 1 cut(s) 335
DpnI GATC 6 cut(s) 39, 116, 588, 713, 1097, 1123
DpnII GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
DriI GACNNNNNGTC 1 cut(s) 175
EaeI YGGCCR 1 cut(s) 62
Eam1104I CTCTTC 2 cut(s) 197, 971
Eam1105I GACNNNNNGTC 1 cut(s) 175
EarI CTCTTC 2 cut(s) 197, 971
EciI GGCGGA 2 cut(s) 69, 233
Ecl136II GAGCTC 2 cut(s) 196, 1130
Eco130I CCWWGG 3 cut(s) 96, 150, 378
Eco24I GRGCYC 2 cut(s) 198, 1132
Eco47I GGWCC 3 cut(s) 177, 238, 482
Eco53kI GAGCTC 2 cut(s) 196, 1130
Eco91I GGTNACC 1 cut(s) 262
EcoICRI GAGCTC 2 cut(s) 196, 1130
EcoO109I RGGNCCY 1 cut(s) 289
EcoO65I GGTNACC 1 cut(s) 262
EcoRI GAATTC 1 cut(s) 775
EcoRII CCWGG 2 cut(s) 160, 793
EcoT14I CCWWGG 3 cut(s) 96, 150, 378
EcoT38I GRGCYC 2 cut(s) 198, 1132
ErhI CCWWGG 3 cut(s) 96, 150, 378
Esp3I CGTCTC 1 cut(s) 218
FaeI CATG 4 cut(s) 34, 154, 184, 190
FaqI GGGAC 1 cut(s) 224
FatI CATG 4 cut(s) 30, 150, 180, 186
FauI CCCGC 2 cut(s) 952, 1046
FauNDI CATATG 1 cut(s) 1018
FbaI TGATCA 1 cut(s) 1095
FokI GGATG 5 cut(s) 203, 365, 904, 977, 1105
FriOI GRGCYC 2 cut(s) 198, 1132
GlaI GCGC 1 cut(s) 102
GsaI CCCAGC 1 cut(s) 465
HaeIII GGCC 5 cut(s) 64, 159, 291, 772, 1057
HapII CCGG 3 cut(s) 267, 503, 584
HgaI GACGC 3 cut(s) 235, 328, 340
HhaI GCGC 1 cut(s) 103
Hin1II CATG 4 cut(s) 34, 154, 184, 190
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HincII GTYRAC 1 cut(s) 318
HindII GTYRAC 1 cut(s) 318
HinfI GANTC 5 cut(s) 567, 637, 856, 949, 1109
HpaII CCGG 3 cut(s) 267, 503, 584
HphI GGTGA 4 cut(s) 274, 836, 999, 1153
Hpy166II GTNNAC 2 cut(s) 73, 318
Hpy188I TCNGA 8 cut(s) 330, 458, 530, 616, 636, 642, 855, 964
Hpy188III TCNNGA 6 cut(s) 31, 199, 211, 272, 1099, 1125
Hpy8I GTNNAC 2 cut(s) 73, 318
Hpy99I CGWCG 3 cut(s) 53, 115, 1000
HpyAV CCTTC 2 cut(s) 377, 1038
HpyCH4III ACNGT 2 cut(s) 235, 349
HpyCH4IV ACGT 3 cut(s) 128, 437, 995
HpyCH4V TGCA 4 cut(s) 301, 409, 868, 935
HpyF10VI GCNNNNNNNGC 7 cut(s) 331, 415, 691, 700, 703, 706, 778
HpyF3I CTNAG 1 cut(s) 335
HpySE526I ACGT 3 cut(s) 128, 437, 995
Hsp92II CATG 4 cut(s) 34, 154, 184, 190
HspAI GCGC 1 cut(s) 101
Ksp22I TGATCA 1 cut(s) 1095
Kzo9I GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
MaeII ACGT 3 cut(s) 128, 437, 995
MaeIII GTNAC 4 cut(s) 138, 262, 739, 1005
MalI GATC 6 cut(s) 39, 116, 588, 713, 1097, 1123
MboI GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
MboII GAAGA 4 cut(s) 214, 355, 488, 988
MflI RGATCY 1 cut(s) 711
MhlI GDGCHC 2 cut(s) 198, 1132
MluCI AATT 3 cut(s) 16, 367, 775
MlyI GAGTC 2 cut(s) 865, 1118
MmeI TCCRAC 2 cut(s) 420, 883
MseI TTAA 3 cut(s) 282, 1026, 1174
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 2 cut(s) 955, 1115
MspI CCGG 3 cut(s) 267, 503, 584
MspR9I CCNGG 3 cut(s) 162, 504, 795
Mva1269I GAATGC 1 cut(s) 667
MvaI CCWGG 2 cut(s) 162, 795
MvnI CGCG 2 cut(s) 103, 947
MwoI GCNNNNNNNGC 7 cut(s) 331, 415, 691, 700, 703, 706, 778
NciI CCSGG 1 cut(s) 504
NcoI CCATGG 1 cut(s) 150
NdeI CATATG 1 cut(s) 1018
NdeII GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
NlaIII CATG 4 cut(s) 34, 154, 184, 190
NlaIV GGNNCC 5 cut(s) 7, 178, 240, 633, 771
NmuCI GTSAC 3 cut(s) 262, 739, 1005
PagI TCATGA 1 cut(s) 30
PctI GAATGC 1 cut(s) 667
PfeI GAWTC 3 cut(s) 567, 637, 949
PfoI TCCNGGA 1 cut(s) 793
PinAI ACCGGT 1 cut(s) 266
PleI GAGTC 2 cut(s) 864, 1117
PpsI GAGTC 2 cut(s) 864, 1117
PshAI GACNNNNGTC 2 cut(s) 236, 310
Psp124BI GAGCTC 2 cut(s) 198, 1132
Psp6I CCWGG 2 cut(s) 160, 793
PspEI GGTNACC 1 cut(s) 262
PspFI CCCAGC 1 cut(s) 461
PspGI CCWGG 2 cut(s) 160, 793
PspN4I GGNNCC 5 cut(s) 7, 178, 240, 633, 771
PspPI GGNCC 7 cut(s) 158, 177, 238, 289, 482, 770, 1055
PstI CTGCAG 2 cut(s) 303, 937
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 1 cut(s) 711
PvuII CAGCTG 2 cut(s) 955, 1115
RsaI GTAC 1 cut(s) 988
RsaNI GTAC 1 cut(s) 987
RseI CAYNNNNRTG 1 cut(s) 185
SacI GAGCTC 2 cut(s) 198, 1132
SaqAI TTAA 3 cut(s) 282, 1026, 1174
Sau3AI GATC 6 cut(s) 37, 114, 586, 711, 1095, 1121
Sau96I GGNCC 7 cut(s) 158, 177, 238, 289, 482, 770, 1055
SchI GAGTC 2 cut(s) 865, 1118
ScrFI CCNGG 3 cut(s) 162, 504, 795
SduI GDGCHC 2 cut(s) 198, 1132
SfcI CTRYAG 2 cut(s) 299, 933
SinI GGWCC 3 cut(s) 177, 238, 482
SmiMI CAYNNNNRTG 1 cut(s) 185
Sse9I AATT 3 cut(s) 16, 367, 775
SsiI CCGC 6 cut(s) 54, 103, 218, 500, 945, 1053
SspI AATATT 1 cut(s) 720
SstI GAGCTC 2 cut(s) 198, 1132
StyD4I CCNGG 3 cut(s) 160, 502, 793
StyI CCWWGG 3 cut(s) 96, 150, 378
TaaI ACNGT 2 cut(s) 235, 349
TaiI ACGT 3 cut(s) 131, 440, 998
TaqI TCGA 3 cut(s) 113, 398, 925
TaqII GACCGA 1 cut(s) 50
TasI AATT 3 cut(s) 16, 367, 775
TauI GCSGC 2 cut(s) 106, 502
TfiI GAWTC 3 cut(s) 567, 637, 949
Tru1I TTAA 3 cut(s) 282, 1026, 1174
Tru9I TTAA 3 cut(s) 282, 1026, 1174
TscAI CASTG 5 cut(s) 72, 559, 663, 867, 942
TseFI GTSAC 3 cut(s) 262, 739, 1005
Tsp45I GTSAC 3 cut(s) 262, 739, 1005
TspDTI ATGAA 3 cut(s) 19, 29, 197
TspGWI ACGGA 1 cut(s) 991
TspRI CASTG 5 cut(s) 72, 559, 663, 867, 942
VpaK11BI GGWCC 3 cut(s) 177, 238, 482
XapI RAATTY 3 cut(s) 16, 367, 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.