FvH4_2g35050

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
25912837 .. 25914532
1696 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g35050.t1

Sequence Viewer

Length: 1128 bp
ATGCTTCCTATTCTTCTTTCATCATCATCAAAGCTTCATGCTCGACAAACCAAACGAGGTCCCTGCCCTATTGACTCTTCTTTTCTGCAGCGGCAAACACATGTTCCCAGTGGTTTCATTTGGCCAGAAGCCGACTTAGTGGCGGCTCACGAAGAGCTCAATGAACATCTGATTGATCTCAAGGGTTTCTTCAAGGGTGACGATGTAGCAACCGAGAATGCTGCCAAGCTCATTAGGGCTTCTTGCTTGAACCATGGCTTTTTTCAAGTCACCAACCACGGTATAGACTCCAGCCTCATTCAACTCGTTGAGGATCATTTTGATAAGTTCTTTCACCTCCCCATTAGCGAGAAGCTGAGGGTCAAGAGAGTCCCCGGTAGCCCTTGGGGTTATTCCGGCTCCCATGCCGACCGATTCTCCACAAAACTTCCCTGGAAGGAAACACTGTCTTTCGGCTTCCATGAGAATGGACCAGAGAAAGTCGTGGTGGATTTCTTTAAATCCAAATTAGGGAATGGTTTTGAAGATACTGGGAAGGTGTACCAAAAATACTGTGAAGCAATGACGAGTTTGGCTCTTTCAATAATGGAGCTACTGGCGATCAGCCTAGGAGTGAAGCGGTCGCAGTACAGAGAATTCTTTAAGGATGCTCATTCTATCATGAGGTGCAACTACTATCCGACTTGCCAAGAGCCAAAGCTTTCTCTTGGGACTGGTCCTCATTGTGATCCAACATCCCTAACCATTCTTCACCAAGACCAAGTTAGGGGGCTTGAAGTTTTTGTCGACAACAAATGGCAATGTGTGAAACCCATCCGTGGTGCTCTGGTCATCAACATTGGTGATACCTTCACGGCGCTATCGAATGGATTGTACAAGAGCTGCCTGCATCGGGCGAGTGTGAACGCCGTCACCGAGAGGAGATCTTTGGCATTCTTTTTGTGCCCTAAGGATGACAATGTGGTGAAACCTCCAGAGGAACTTGTTACTGAAGTAGGAACAAGGAAGTACCCAGATTTCACTTGGTCCGAGTTGCTTGGATTCACTCAGAACCATTACAGATGTGATGAGTTTACCCTCCATCAGTTCTTCAAGTTCATCAAGTCTGAATCCAAATCAGTCAATTGA

Protein Analysis

376

Amino Acids

42.53

Weight (kDa)

7.63

Isoelectric Point (pI)

28.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 57 - 155 3.1e-22 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 218 - 316 6.9e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017250)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g35050
malus_domestica MD15G1088200.v1.1
prunus_persica Prupe.1G442200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0306941
rosa_laevigata RLG00000010753
rosa_multiflora Rmu_sc0007920.1_g000031
rosa_roxburghii Rroxscaffold_7G00161340
rosa_rugosa Rorug06G0354600.1
rosa_samantha Rh6AG466300 Rh6BG434800 Rh6CG481000 Rh6DG467500
rosa_wichuraiana Rw6G040620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 786
AciI CCGC 3 cut(s) 91, 143, 619
AclWI GGATC 2 cut(s) 321, 722
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 1 cut(s) 635
AcuI CTGAAG 1 cut(s) 1011
AfaI GTAC 4 cut(s) 542, 629, 875, 1010
AfiI CCNNNNNNNGG 4 cut(s) 510, 766, 818, 892
AflIII ACRYGT 1 cut(s) 100
AgsI TTSAA 8 cut(s) 193, 250, 266, 302, 524, 582, 776, 1093
AjnI CCWGG 1 cut(s) 431
AluBI AGCT 7 cut(s) 34, 157, 229, 355, 592, 700, 882
AluI AGCT 7 cut(s) 34, 157, 229, 355, 592, 700, 882
Alw21I GWGCWC 2 cut(s) 159, 826
AlwI GGATC 2 cut(s) 321, 722
AoxI GGCC 1 cut(s) 122
ApeKI GCWGC 3 cut(s) 88, 221, 882
ApoI RAATTY 1 cut(s) 635
AspA2I CCTAGG 1 cut(s) 607
AspLEI GCGC 1 cut(s) 859
AspS9I GGNCC 4 cut(s) 59, 470, 716, 1026
AsuC2I CCSGG 1 cut(s) 375
AsuHPI GGTGA 7 cut(s) 209, 262, 326, 743, 854, 904, 976
AvaII GGWCC 4 cut(s) 59, 470, 716, 1026
AvrII CCTAGG 1 cut(s) 607
AxyI CCTNAGG 1 cut(s) 948
BaeGI GKGCMC 1 cut(s) 947
BalI TGGCCA 1 cut(s) 124
BanII GRGCYC 1 cut(s) 159
Bbv12I GWGCWC 2 cut(s) 159, 826
BbvCI CCTCAGC 1 cut(s) 356
BbvI GCAGC 3 cut(s) 100, 208, 869
BccI CCATC 2 cut(s) 821, 1089
BceAI ACGGC 2 cut(s) 870, 893
BcgI CGANNNNNNTGC 4 cut(s) 45, 79, 203, 237
BciT130I CCWGG 1 cut(s) 433
BcnI CCSGG 1 cut(s) 375
BfaI CTAG 1 cut(s) 608
BfmI CTRYAG 1 cut(s) 86
BfoI RGCGCY 1 cut(s) 860
BglII AGATCT 1 cut(s) 923
BisI GCNGC 5 cut(s) 89, 92, 144, 222, 883
BlnI CCTAGG 1 cut(s) 607
BlsI GCNGC 5 cut(s) 90, 93, 145, 223, 884
Bme1390I CCNGG 2 cut(s) 375, 433
Bme18I GGWCC 4 cut(s) 59, 470, 716, 1026
BmgT120I GGNCC 4 cut(s) 59, 470, 716, 1026
BmiI GGNNCC 2 cut(s) 61, 400
BmrFI CCNGG 2 cut(s) 375, 433
BmrI ACTGGG 2 cut(s) 102, 540
BmsI GCATC 2 cut(s) 637, 898
BmuI ACTGGG 2 cut(s) 102, 540
BplI GAGNNNNNCTC 2 cut(s) 559, 591
BpmI CTGGAG 2 cut(s) 274, 957
Bpu10I CCTNAGC 1 cut(s) 356
BpuEI CTTGAG 1 cut(s) 164
BpuMI CCSGG 1 cut(s) 375
BsaJI CCNNGG 7 cut(s) 253, 277, 373, 383, 431, 607, 817
BsaXI ACNNNNNCTCC 2 cut(s) 401, 431
Bsc4I CCNNNNNNNGG 4 cut(s) 510, 766, 818, 892
Bse1I ACTGG 4 cut(s) 108, 535, 600, 718
Bse21I CCTNAGG 1 cut(s) 948
Bse3DI GCAATG 2 cut(s) 567, 806
BseBI CCWGG 1 cut(s) 433
BseDI CCNNGG 7 cut(s) 253, 277, 373, 383, 431, 607, 817
BseGI GGATG 4 cut(s) 652, 734, 813, 958
BseLI CCNNNNNNNGG 4 cut(s) 510, 766, 818, 892
BseMI GCAATG 2 cut(s) 567, 806
BseMII CTCAG 2 cut(s) 347, 1061
BseNI ACTGG 4 cut(s) 108, 535, 600, 718
BseRI GAGGAG 1 cut(s) 934
BseSI GKGCMC 1 cut(s) 947
BseXI GCAGC 3 cut(s) 100, 208, 869
Bsh1285I CGRYCG 2 cut(s) 412, 623
BshFI GGCC 1 cut(s) 124
BsiEI CGRYCG 2 cut(s) 412, 623
BsiHKAI GWGCWC 2 cut(s) 159, 826
BsiSI CCGG 2 cut(s) 375, 396
BslFI GGGAC 3 cut(s) 45, 356, 724
BslI CCNNNNNNNGG 4 cut(s) 510, 766, 818, 892
BsmFI GGGAC 3 cut(s) 45, 356, 724
BsmI GAATGC 2 cut(s) 223, 932
BsnI GGCC 1 cut(s) 124
Bsp1286I GDGCHC 3 cut(s) 159, 826, 947
Bsp1407I TGTACA 1 cut(s) 873
Bsp143I GATC 5 cut(s) 175, 313, 600, 727, 923
Bsp19I CCATGG 1 cut(s) 253
BspACI CCGC 3 cut(s) 91, 143, 619
BspANI GGCC 1 cut(s) 124
BspCNI CTCAG 2 cut(s) 348, 1060
BspHI TCATGA 1 cut(s) 660
BspLI GGNNCC 2 cut(s) 61, 400
BspMAI CTGCAG 1 cut(s) 90
BspPI GGATC 2 cut(s) 321, 722
BspQI GCTCTTC 1 cut(s) 147
BsrDI GCAATG 2 cut(s) 567, 806
BsrGI TGTACA 1 cut(s) 873
BsrI ACTGG 4 cut(s) 108, 535, 600, 718
BssECI CCNNGG 7 cut(s) 253, 277, 373, 383, 431, 607, 817
BssMI GATC 5 cut(s) 175, 313, 600, 727, 923
BssT1I CCWWGG 3 cut(s) 253, 383, 607
Bst2UI CCWGG 1 cut(s) 433
Bst4CI ACNGT 3 cut(s) 281, 447, 554
Bst6I CTCTTC 2 cut(s) 82, 147
BstAUI TGTACA 1 cut(s) 873
BstC8I GCNNGC 1 cut(s) 887
BstDEI CTNAG 4 cut(s) 136, 356, 948, 1047
BstDSI CCRYGG 3 cut(s) 253, 277, 817
BstF5I GGATG 4 cut(s) 652, 734, 813, 958
BstH2I RGCGCY 1 cut(s) 860
BstHHI GCGC 1 cut(s) 859
BstKTI GATC 5 cut(s) 178, 316, 603, 730, 926
BstMBI GATC 5 cut(s) 175, 313, 600, 727, 923
BstMCI CGRYCG 2 cut(s) 412, 623
BstNI CCWGG 1 cut(s) 433
BstNSI RCATGY 1 cut(s) 104
BstSCI CCNGG 2 cut(s) 373, 431
BstSFI CTRYAG 1 cut(s) 86
BstSLI GKGCMC 1 cut(s) 947
BstV1I GCAGC 3 cut(s) 100, 208, 869
BstX2I RGATCY 1 cut(s) 923
BstXI CCANNNNNNTGG 1 cut(s) 467
BstYI RGATCY 1 cut(s) 923
Bsu36I CCTNAGG 1 cut(s) 948
BsuRI GGCC 1 cut(s) 124
BtgI CCRYGG 3 cut(s) 253, 277, 817
BtsCI GGATG 4 cut(s) 652, 734, 813, 958
BtsIMutI CAGTG 2 cut(s) 115, 443
Cac8I GCNNGC 1 cut(s) 887
CciI TCATGA 1 cut(s) 660
CfoI GCGC 1 cut(s) 859
Cfr13I GGNCC 4 cut(s) 59, 470, 716, 1026
Csp6I GTAC 4 cut(s) 541, 628, 874, 1009
CviAII CATG 6 cut(s) 38, 101, 254, 404, 461, 661
CviQI GTAC 4 cut(s) 541, 628, 874, 1009
DdeI CTNAG 4 cut(s) 136, 356, 948, 1047
DpnI GATC 5 cut(s) 177, 315, 602, 729, 925
DpnII GATC 5 cut(s) 175, 313, 600, 727, 923
DraI TTTAAA 1 cut(s) 499
EaeI YGGCCR 1 cut(s) 122
Eam1104I CTCTTC 2 cut(s) 82, 147
EarI CTCTTC 2 cut(s) 82, 147
Ecl136II GAGCTC 1 cut(s) 157
Eco130I CCWWGG 3 cut(s) 253, 383, 607
Eco24I GRGCYC 1 cut(s) 159
Eco47I GGWCC 4 cut(s) 59, 470, 716, 1026
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 1011
Eco81I CCTNAGG 1 cut(s) 948
EcoICRI GAGCTC 1 cut(s) 157
EcoO109I RGGNCCY 1 cut(s) 59
EcoRI GAATTC 1 cut(s) 635
EcoRII CCWGG 1 cut(s) 431
EcoT14I CCWWGG 3 cut(s) 253, 383, 607
EcoT38I GRGCYC 1 cut(s) 159
ErhI CCWWGG 3 cut(s) 253, 383, 607
FaeI CATG 6 cut(s) 41, 104, 257, 407, 464, 664
FaiI YATR 7 cut(s) 39, 102, 255, 284, 405, 462, 662
FalI AAGNNNNNCTT 2 cut(s) 173, 205
FaqI GGGAC 3 cut(s) 45, 356, 724
FatI CATG 6 cut(s) 37, 100, 253, 403, 460, 660
FblI GTMKAC 1 cut(s) 786
Fnu4HI GCNGC 5 cut(s) 89, 92, 144, 222, 883
FokI GGATG 4 cut(s) 659, 721, 800, 965
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 5 cut(s) 89, 92, 144, 222, 883
FspBI CTAG 1 cut(s) 608
GlaI GCGC 1 cut(s) 858
GluI GCNGC 5 cut(s) 89, 92, 144, 222, 883
GsuI CTGGAG 2 cut(s) 274, 957
HaeII RGCGCY 1 cut(s) 860
HaeIII GGCC 1 cut(s) 124
HapII CCGG 2 cut(s) 375, 396
HhaI GCGC 1 cut(s) 859
Hin1II CATG 6 cut(s) 41, 104, 257, 407, 464, 664
Hin6I GCGC 1 cut(s) 857
HinP1I GCGC 1 cut(s) 857
HincII GTYRAC 1 cut(s) 787
HindII GTYRAC 1 cut(s) 787
HindIII AAGCTT 2 cut(s) 32, 698
HinfI GANTC 6 cut(s) 74, 287, 369, 414, 1041, 1109
HpaII CCGG 2 cut(s) 375, 396
HphI GGTGA 7 cut(s) 209, 262, 326, 743, 854, 904, 976
Hpy166II GTNNAC 4 cut(s) 541, 787, 904, 1074
Hpy188I TCNGA 5 cut(s) 171, 681, 1030, 1050, 1108
Hpy188III TCNNGA 4 cut(s) 149, 364, 661, 974
Hpy8I GTNNAC 4 cut(s) 541, 787, 904, 1074
HpyAV CCTTC 3 cut(s) 430, 529, 859
HpyCH4III ACNGT 3 cut(s) 281, 447, 554
HpyCH4V TGCA 3 cut(s) 88, 669, 889
HpyF3I CTNAG 4 cut(s) 136, 356, 948, 1047
Hsp92II CATG 6 cut(s) 41, 104, 257, 407, 464, 664
HspAI GCGC 1 cut(s) 857
Kzo9I GATC 5 cut(s) 175, 313, 600, 727, 923
LguI GCTCTTC 1 cut(s) 147
LmnI GCTCC 2 cut(s) 404, 589
Lsp1109I GCAGC 3 cut(s) 100, 208, 869
LweI GCATC 2 cut(s) 637, 898
MaeI CTAG 1 cut(s) 608
MaeIII GTNAC 4 cut(s) 197, 268, 910, 985
MalI GATC 5 cut(s) 177, 315, 602, 729, 925
MboI GATC 5 cut(s) 175, 313, 600, 727, 923
MboII GAAGA 7 cut(s) 5, 69, 164, 181, 536, 740, 1081
MfeI CAATTG 1 cut(s) 1123
MflI RGATCY 1 cut(s) 923
MhlI GDGCHC 3 cut(s) 159, 826, 947
MlsI TGGCCA 1 cut(s) 124
MluCI AATT 3 cut(s) 506, 635, 1123
MluNI TGGCCA 1 cut(s) 124
MlyI GAGTC 3 cut(s) 68, 281, 378
MmeI TCCRAC 2 cut(s) 704, 755
Mox20I TGGCCA 1 cut(s) 124
MscI TGGCCA 1 cut(s) 124
MseI TTAA 2 cut(s) 498, 642
MslI CAYNNNNRTG 1 cut(s) 465
Msp20I TGGCCA 1 cut(s) 124
MspA1I CMGCKG 1 cut(s) 91
MspI CCGG 2 cut(s) 375, 396
MspR9I CCNGG 2 cut(s) 375, 433
MunI CAATTG 1 cut(s) 1123
Mva1269I GAATGC 2 cut(s) 223, 932
MvaI CCWGG 1 cut(s) 433
NciI CCSGG 1 cut(s) 375
NcoI CCATGG 1 cut(s) 253
NdeII GATC 5 cut(s) 175, 313, 600, 727, 923
NlaIII CATG 6 cut(s) 41, 104, 257, 407, 464, 664
NlaIV GGNNCC 2 cut(s) 61, 400
NmuCI GTSAC 3 cut(s) 197, 268, 910
NspI RCATGY 1 cut(s) 104
PagI TCATGA 1 cut(s) 660
PciI ACATGT 1 cut(s) 100
PciSI GCTCTTC 1 cut(s) 147
PcsI WCGNNNNNNNCGW 2 cut(s) 860, 912
PctI GAATGC 2 cut(s) 223, 932
PfeI GAWTC 3 cut(s) 414, 1041, 1109
PkrI GCNGC 5 cut(s) 90, 93, 145, 223, 884
PleI GAGTC 3 cut(s) 68, 281, 377
PpsI GAGTC 3 cut(s) 68, 281, 377
PpuMI RGGWCCY 1 cut(s) 59
PscI ACATGT 1 cut(s) 100
Psp124BI GAGCTC 1 cut(s) 159
Psp5II RGGWCCY 1 cut(s) 59
Psp6I CCWGG 1 cut(s) 431
PspGI CCWGG 1 cut(s) 431
PspN4I GGNNCC 2 cut(s) 61, 400
PspPI GGNCC 4 cut(s) 59, 470, 716, 1026
PspPPI RGGWCCY 1 cut(s) 59
PstI CTGCAG 1 cut(s) 90
PsuI RGATCY 1 cut(s) 923
RsaI GTAC 4 cut(s) 542, 629, 875, 1010
RsaNI GTAC 4 cut(s) 541, 628, 874, 1009
RseI CAYNNNNRTG 1 cut(s) 465
SacI GAGCTC 1 cut(s) 159
SalI GTCGAC 1 cut(s) 785
SapI GCTCTTC 1 cut(s) 147
SaqAI TTAA 2 cut(s) 498, 642
SatI GCNGC 5 cut(s) 89, 92, 144, 222, 883
Sau3AI GATC 5 cut(s) 175, 313, 600, 727, 923
Sau96I GGNCC 4 cut(s) 59, 470, 716, 1026
SchI GAGTC 3 cut(s) 68, 281, 378
ScrFI CCNGG 2 cut(s) 375, 433
SduI GDGCHC 3 cut(s) 159, 826, 947
SfaNI GCATC 2 cut(s) 637, 898
SfcI CTRYAG 1 cut(s) 86
SinI GGWCC 4 cut(s) 59, 470, 716, 1026
SmiMI CAYNNNNRTG 1 cut(s) 465
SmlI CTYRAG 1 cut(s) 179
SmoI CTYRAG 1 cut(s) 179
Sse9I AATT 3 cut(s) 506, 635, 1123
SsiI CCGC 3 cut(s) 91, 143, 619
SspMI CTAG 1 cut(s) 608
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 2 cut(s) 373, 431
StyI CCWWGG 3 cut(s) 253, 383, 607
TaaI ACNGT 3 cut(s) 281, 447, 554
TaqI TCGA 3 cut(s) 43, 786, 863
TaqII GACCGA 1 cut(s) 426
TasI AATT 3 cut(s) 506, 635, 1123
TatI WGTACW 2 cut(s) 627, 873
TauI GCSGC 2 cut(s) 94, 146
TfiI GAWTC 3 cut(s) 414, 1041, 1109
Tru1I TTAA 2 cut(s) 498, 642
Tru9I TTAA 2 cut(s) 498, 642
TscAI CASTG 2 cut(s) 115, 450
TseFI GTSAC 3 cut(s) 197, 268, 910
TseI GCWGC 3 cut(s) 88, 221, 882
Tsp45I GTSAC 3 cut(s) 197, 268, 910
TspDTI ATGAA 5 cut(s) 9, 26, 106, 177, 1087
TspGWI ACGGA 1 cut(s) 806
TspRI CASTG 2 cut(s) 115, 450
VpaK11BI GGWCC 4 cut(s) 59, 470, 716, 1026
XapI RAATTY 1 cut(s) 635
XceI RCATGY 1 cut(s) 104
XcmI CCANNNNNNNNNTGG 1 cut(s) 1020
XmaJI CCTAGG 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 786
XspI CTAG 1 cut(s) 608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.