FvH4_2g37440

Salutaridinol 7-O-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0018386
Physical Location & Seq
Forward (+)
27284225 .. 27285722
1498 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g37440.t1

Sequence Viewer

Length: 1437 bp
ATGAAGATCTTGCAAGTAGAAGTTGTTTCTGAAGAGAAGATTAAACCCTCTTTCCCAACACCCTCTCACCTCAAAACCTTCAAGCTTAGCCTTCTTGATCACCTCATTCCAGCTCCTTATGCTCCCATTATTCTCTTTTACAATCCCATTTCTACCGTCACCACCACCACAAGACTTGAATTGCTTAAAGCGTCTTTATCCGAGGCCTTAACTGAGTTCTACCCCCTCGCCGGGAAGCTCAACGATGATGATGTATATGTCGAGTGCAACGATGAAGGAGCTGCCTTCATCGAAACCAGAGTTAAGCACTTTACTCTTCACGAGTTTCTCAGCCGACCTGAACTCTTTGATTCATTGCTGAAACAATTCCTTCCTGGTAATATTACTCACACGAGTAGTGGCAATTTTGTTACCAATATCCAAGCAAATGTGTTCAAGTGCGGTGGCATTGCCATTGGCATATGCATCTCCCACAAGCTCCTTGATGGCGCTGCCTTGTGTACTTTCCTTAAGTCATGGACTGCTATTGGTCGTCGATTACTATCAGGATCATCGGAGAAAGCAGCGCCACCACGAATCTCCCCTAATCTATCTGCTGCGGCTTCTTTGTTCCCCACAAATGGTGATCTGTGGCTTAGAGATTCCTCACTTCACATGTGGGGCTCCTTGTTCATACAAGGCAAGGAGTCTAGTGTGACAAAAAGATTTGTGTTTGATGCCTCGGCTATAGCCACCCTCAAGCTCAACGCACGAATGGCTCGAAAGAAACCACCCACGCGCGTTGAGGTGGTTTCGGCTTTCTTATGGCAGTGCTGCATGGCTGCCTCTAAAGAAAAACATGGTATTCAAAGGCCTTCACTGTTGACACACATTGTGAACCTCCGCTCCAAACTACTGAATGCAATGGATGATGGTCGTGATTCCGGTTCTGATCTTCAGTACTCCACCGGAAACCTCCTCTGGATGGCAGCAGCACGATCTTATATCGGAGATAGCGATGAAGATGACGAGCAGCAGGAGCAGCAGAACTCGGTCTTGCCAGACTTGGTGAGTGAAGTGAGAAATGCATTGTCTAGAATCGATGCTGGTTTTGCCAAAGAAATCCAAGGGAAGCAGGGGAAGTCTCTGATGATAGATTCTCTAGAAGGAATCATGAACAGTGATGGGTTGGATTTAGATTATTATGGTTTTAGCAGTTGGTGCAAGTTTGGGTGGTACGAAGCTGCTGATTTTGGGTGGGGGAAGCCAGCATGGGTGAGCAGCATTGGTTCGAGTAGTGCTCCTCACTTCATGAATCTGATCATTTTGGTCGACACAAAGTCCGGTGACGGAATTGAAGCATGGGTCACTTTGGATCAGCGTCAGATGACTCTGCTAGAAGCCAACTCCGACCTCAGGAAGCTGGTTTCAGTGGATCCTAGTCCTCTGGATTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

479

Amino Acids

52.73

Weight (kDa)

5.75

Isoelectric Point (pI)

41.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 462 2.4e-70 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018386)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g37440
malus_domestica MD15G1001600.v1.1
prunus_persica Prupe.1G354400_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0304281
rosa_laevigata RLG00000010995
rosa_multiflora Rmu_sc0001652.1_g000008
rosa_roxburghii Rroxscaffold_7G00163880
rosa_rugosa Rorug06G0329600
rosa_samantha Rh6BG459400
rosa_wichuraiana Rw6G038440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1435
AccBSI CCGCTC 1 cut(s) 885
AccI GTMKAC 1 cut(s) 1311
AccII CGCG 2 cut(s) 778, 780
AciI CCGC 3 cut(s) 441, 599, 883
AclWI GGATC 4 cut(s) 556, 1362, 1409, 1422
AcuI CTGAAG 2 cut(s) 51, 920
AdeI CACNNNGTG 1 cut(s) 874
AfaI GTAC 3 cut(s) 502, 941, 1217
AfiI CCNNNNNNNGG 5 cut(s) 230, 231, 620, 964, 1395
AflII CTTAAG 1 cut(s) 509
AflIII ACRYGT 1 cut(s) 654
AgsI TTSAA 5 cut(s) 82, 179, 436, 848, 1337
AhdI GACNNNNNGTC 1 cut(s) 1318
AjnI CCWGG 1 cut(s) 373
AloI GAACNNNNNNTCC 2 cut(s) 869, 901
AluBI AGCT 8 cut(s) 85, 113, 238, 281, 478, 742, 1223, 1402
AluI AGCT 8 cut(s) 85, 113, 238, 281, 478, 742, 1223, 1402
Alw21I GWGCWC 1 cut(s) 1282
Alw26I GTCTC 1 cut(s) 1128
AlwI GGATC 4 cut(s) 556, 1362, 1409, 1422
AoxI GGCC 2 cut(s) 204, 851
Asp700I GAANNNNTTC 1 cut(s) 365
AspLEI GCGC 3 cut(s) 491, 568, 780
AsuC2I CCSGG 1 cut(s) 232
AsuHPI GGTGA 7 cut(s) 59, 92, 151, 635, 1060, 1267, 1337
AxyI CCTNAGG 1 cut(s) 1394
BamHI GGATCC 1 cut(s) 1414
BanII GRGCYC 1 cut(s) 665
BauI CACGAG 2 cut(s) 320, 391
Bbv12I GWGCWC 1 cut(s) 1282
BccI CCATC 4 cut(s) 479, 905, 958, 1157
BciT130I CCWGG 1 cut(s) 375
BclI TGATCA 2 cut(s) 97, 1299
BcnI CCSGG 1 cut(s) 232
BcoDI GTCTC 1 cut(s) 1128
BfaI CTAG 5 cut(s) 690, 1074, 1142, 1376, 1419
BfmI CTRYAG 1 cut(s) 726
BfoI RGCGCY 2 cut(s) 492, 569
BfrI CTTAAG 1 cut(s) 509
BglII AGATCT 1 cut(s) 6
BlpI GCTNAGC 1 cut(s) 86
BmcAI AGTACT 1 cut(s) 941
Bme1390I CCNGG 2 cut(s) 232, 375
BmeRI GACNNNNNGTC 1 cut(s) 1318
BmiI GGNNCC 2 cut(s) 664, 1416
BmrFI CCNGG 2 cut(s) 232, 375
BmsI GCATC 3 cut(s) 474, 706, 1072
BplI GAGNNNNNCTC 2 cut(s) 1264, 1296
Bpu1102I GCTNAGC 1 cut(s) 86
BpuEI CTTGAG 1 cut(s) 722
BpuMI CCSGG 1 cut(s) 232
Bsa29I ATCGAT 1 cut(s) 1080
BsaBI GATNNNNATC 1 cut(s) 541
BsaJI CCNNGG 3 cut(s) 201, 720, 1105
BsaWI WCCGGW 3 cut(s) 923, 947, 1322
BsaXI ACNNNNNCTCC 2 cut(s) 869, 899
Bsc4I CCNNNNNNNGG 5 cut(s) 230, 231, 620, 964, 1395
Bse21I CCTNAGG 1 cut(s) 1394
Bse3DI GCAATG 3 cut(s) 353, 447, 909
Bse8I GATNNNNATC 1 cut(s) 541
BseBI CCWGG 1 cut(s) 375
BseCI ATCGAT 1 cut(s) 1080
BseDI CCNNGG 3 cut(s) 201, 720, 1105
BseGI GGATG 2 cut(s) 913, 969
BseJI GATNNNNATC 1 cut(s) 541
BseLI CCNNNNNNNGG 5 cut(s) 230, 231, 620, 964, 1395
BseMI GCAATG 3 cut(s) 353, 447, 909
BseMII CTCAG 3 cut(s) 204, 343, 1408
BseRI GAGGAG 2 cut(s) 947, 1272
Bsh1236I CGCG 2 cut(s) 778, 780
BshFI GGCC 2 cut(s) 206, 853
BshVI ATCGAT 1 cut(s) 1080
BsiHKAI GWGCWC 1 cut(s) 1282
BsiSI CCGG 4 cut(s) 231, 924, 948, 1323
BslI CCNNNNNNNGG 5 cut(s) 230, 231, 620, 964, 1395
BsmAI GTCTC 1 cut(s) 1128
BsmI GAATGC 1 cut(s) 904
BsnI GGCC 2 cut(s) 206, 853
Bsp1286I GDGCHC 2 cut(s) 665, 1282
Bsp143I GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
Bsp1720I GCTNAGC 1 cut(s) 86
BspACI CCGC 3 cut(s) 441, 599, 883
BspANI GGCC 2 cut(s) 206, 853
BspCNI CTCAG 3 cut(s) 205, 342, 1407
BspDI ATCGAT 1 cut(s) 1080
BspFNI CGCG 2 cut(s) 778, 780
BspHI TCATGA 2 cut(s) 1152, 1290
BspLI GGNNCC 2 cut(s) 664, 1416
BspPI GGATC 4 cut(s) 556, 1362, 1409, 1422
BspTI CTTAAG 1 cut(s) 509
BsrBI CCGCTC 1 cut(s) 885
BsrDI GCAATG 3 cut(s) 353, 447, 909
BssECI CCNNGG 3 cut(s) 201, 720, 1105
BssMI GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
BssSI CACGAG 2 cut(s) 320, 391
BssT1I CCWWGG 1 cut(s) 1105
Bst2BI CACGAG 2 cut(s) 320, 391
Bst2UI CCWGG 1 cut(s) 375
Bst4CI ACNGT 3 cut(s) 157, 861, 1160
Bst6I CTCTTC 2 cut(s) 27, 321
BstAFI CTTAAG 1 cut(s) 509
BstAPI GCANNNNNTGC 1 cut(s) 1200
BstC8I GCNNGC 1 cut(s) 1248
BstDEI CTNAG 5 cut(s) 86, 213, 329, 635, 1394
BstF5I GGATG 2 cut(s) 913, 969
BstFNI CGCG 2 cut(s) 778, 780
BstH2I RGCGCY 2 cut(s) 492, 569
BstHHI GCGC 3 cut(s) 491, 568, 780
BstKTI GATC 9 cut(s) 9, 100, 551, 628, 934, 980, 1302, 1357, 1417
BstMAI GTCTC 1 cut(s) 1128
BstMBI GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
BstMWI GCNNNNNNNGC 6 cut(s) 119, 755, 1018, 1021, 1091, 1200
BstNI CCWGG 1 cut(s) 375
BstNSI RCATGY 1 cut(s) 658
BstSCI CCNGG 2 cut(s) 230, 373
BstSFI CTRYAG 1 cut(s) 726
BstUI CGCG 2 cut(s) 778, 780
BstX2I RGATCY 2 cut(s) 6, 1414
BstYI RGATCY 2 cut(s) 6, 1414
Bsu15I ATCGAT 1 cut(s) 1080
Bsu36I CCTNAGG 1 cut(s) 1394
BsuRI GGCC 2 cut(s) 206, 853
BsuTUI ATCGAT 1 cut(s) 1080
BtgZI GCGATG 1 cut(s) 1011
BtsCI GGATG 2 cut(s) 913, 969
BtsI GCAGTG 1 cut(s) 815
BtsIMutI CAGTG 4 cut(s) 815, 857, 1165, 1416
Cac8I GCNNGC 1 cut(s) 1248
CciI TCATGA 2 cut(s) 1152, 1290
CfoI GCGC 3 cut(s) 491, 568, 780
ClaI ATCGAT 1 cut(s) 1080
CseI GACGC 2 cut(s) 180, 1349
Csp6I GTAC 3 cut(s) 501, 940, 1216
CspCI CAANNNNNGTGG 6 cut(s) 157, 192, 424, 459, 763, 798
CviAII CATG 8 cut(s) 516, 655, 817, 839, 1153, 1251, 1291, 1341
CviQI GTAC 3 cut(s) 501, 940, 1216
DdeI CTNAG 5 cut(s) 86, 213, 329, 635, 1394
DpnI GATC 9 cut(s) 8, 99, 550, 627, 933, 979, 1301, 1356, 1416
DpnII GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
DraIII CACNNNGTG 1 cut(s) 874
DriI GACNNNNNGTC 1 cut(s) 1318
Eam1104I CTCTTC 2 cut(s) 27, 321
Eam1105I GACNNNNNGTC 1 cut(s) 1318
EarI CTCTTC 2 cut(s) 27, 321
Eco130I CCWWGG 1 cut(s) 1105
Eco147I AGGCCT 2 cut(s) 206, 853
Eco24I GRGCYC 1 cut(s) 665
Eco57I CTGAAG 2 cut(s) 51, 920
Eco81I CCTNAGG 1 cut(s) 1394
EcoRII CCWGG 1 cut(s) 373
EcoT14I CCWWGG 1 cut(s) 1105
EcoT22I ATGCAT 2 cut(s) 467, 1069
EcoT38I GRGCYC 1 cut(s) 665
ErhI CCWWGG 1 cut(s) 1105
FaeI CATG 8 cut(s) 519, 658, 820, 842, 1156, 1254, 1294, 1344
FatI CATG 8 cut(s) 515, 654, 816, 838, 1152, 1250, 1290, 1340
FauNDI CATATG 1 cut(s) 461
FbaI TGATCA 2 cut(s) 97, 1299
FblI GTMKAC 1 cut(s) 1311
FokI GGATG 2 cut(s) 920, 976
FriOI GRGCYC 1 cut(s) 665
FspBI CTAG 5 cut(s) 690, 1074, 1142, 1376, 1419
GlaI GCGC 3 cut(s) 490, 567, 779
HaeII RGCGCY 2 cut(s) 492, 569
HaeIII GGCC 2 cut(s) 206, 853
HapII CCGG 4 cut(s) 231, 924, 948, 1323
HgaI GACGC 2 cut(s) 180, 1349
HhaI GCGC 3 cut(s) 491, 568, 780
Hin1II CATG 8 cut(s) 519, 658, 820, 842, 1156, 1254, 1294, 1344
Hin6I GCGC 3 cut(s) 489, 566, 778
HinP1I GCGC 3 cut(s) 489, 566, 778
HincII GTYRAC 2 cut(s) 864, 1312
HindII GTYRAC 2 cut(s) 864, 1312
HindIII AAGCTT 1 cut(s) 83
HpaII CCGG 4 cut(s) 231, 924, 948, 1323
HphI GGTGA 7 cut(s) 59, 92, 151, 635, 1060, 1267, 1337
Hpy166II GTNNAC 4 cut(s) 501, 864, 877, 1312
Hpy188I TCNGA 9 cut(s) 31, 202, 556, 931, 989, 1128, 1299, 1365, 1390
Hpy8I GTNNAC 4 cut(s) 501, 864, 877, 1312
Hpy99I CGWCG 1 cut(s) 537
HpyAV CCTTC 7 cut(s) 88, 101, 269, 295, 380, 864, 1139
HpyCH4III ACNGT 3 cut(s) 157, 861, 1160
HpyCH4V TGCA 7 cut(s) 13, 267, 465, 816, 902, 1067, 1203
HpyF10VI GCNNNNNNNGC 6 cut(s) 119, 755, 1018, 1021, 1091, 1200
HpyF3I CTNAG 5 cut(s) 86, 213, 329, 635, 1394
Hsp92II CATG 8 cut(s) 519, 658, 820, 842, 1156, 1254, 1294, 1344
HspAI GCGC 3 cut(s) 489, 566, 778
Ksp22I TGATCA 2 cut(s) 97, 1299
Kzo9I GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
LmnI GCTCC 8 cut(s) 118, 127, 278, 483, 668, 890, 1018, 1285
LweI GCATC 3 cut(s) 474, 706, 1072
MaeI CTAG 5 cut(s) 690, 1074, 1142, 1376, 1419
MaeIII GTNAC 5 cut(s) 157, 409, 694, 1325, 1345
MalI GATC 9 cut(s) 8, 99, 550, 627, 933, 979, 1301, 1356, 1416
MbiI CCGCTC 1 cut(s) 885
MboI GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
MboII GAAGA 6 cut(s) 16, 44, 49, 308, 926, 1013
MflI RGATCY 2 cut(s) 6, 1414
MhlI GDGCHC 2 cut(s) 665, 1282
MluCI AATT 4 cut(s) 179, 365, 403, 1332
MlyI GAGTC 2 cut(s) 695, 1363
MmeI TCCRAC 2 cut(s) 1149, 1413
Mph1103I ATGCAT 2 cut(s) 467, 1069
MroXI GAANNNNTTC 1 cut(s) 365
MseI TTAA 5 cut(s) 42, 186, 209, 303, 510
MspCI CTTAAG 1 cut(s) 509
MspI CCGG 4 cut(s) 231, 924, 948, 1323
MspR9I CCNGG 2 cut(s) 232, 375
Mva1269I GAATGC 1 cut(s) 904
MvaI CCWGG 1 cut(s) 375
MvnI CGCG 2 cut(s) 778, 780
MwoI GCNNNNNNNGC 6 cut(s) 119, 755, 1018, 1021, 1091, 1200
NciI CCSGG 1 cut(s) 232
NdeI CATATG 1 cut(s) 461
NdeII GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
NlaIII CATG 8 cut(s) 519, 658, 820, 842, 1156, 1254, 1294, 1344
NlaIV GGNNCC 2 cut(s) 664, 1416
NmeAIII GCCGAG 1 cut(s) 701
NmuCI GTSAC 4 cut(s) 157, 694, 1325, 1345
NsiI ATGCAT 2 cut(s) 467, 1069
NspI RCATGY 1 cut(s) 658
PagI TCATGA 2 cut(s) 1152, 1290
PceI AGGCCT 2 cut(s) 206, 853
PciI ACATGT 1 cut(s) 654
PcsI WCGNNNNNNNCGW 3 cut(s) 267, 757, 993
PctI GAATGC 1 cut(s) 904
PdmI GAANNNNTTC 1 cut(s) 365
PfeI GAWTC 8 cut(s) 350, 576, 641, 920, 1077, 1136, 1149, 1294
PleI GAGTC 2 cut(s) 694, 1363
PpsI GAGTC 2 cut(s) 694, 1363
PscI ACATGT 1 cut(s) 654
PsiI TTATAA 1 cut(s) 1435
Psp6I CCWGG 1 cut(s) 373
PspGI CCWGG 1 cut(s) 373
PspN4I GGNNCC 2 cut(s) 664, 1416
PsuI RGATCY 2 cut(s) 6, 1414
RsaI GTAC 3 cut(s) 502, 941, 1217
RsaNI GTAC 3 cut(s) 501, 940, 1216
SalI GTCGAC 1 cut(s) 1310
SaqAI TTAA 5 cut(s) 42, 186, 209, 303, 510
Sau3AI GATC 9 cut(s) 6, 97, 548, 625, 931, 977, 1299, 1354, 1414
ScaI AGTACT 1 cut(s) 941
SchI GAGTC 2 cut(s) 695, 1363
ScrFI CCNGG 2 cut(s) 232, 375
SduI GDGCHC 2 cut(s) 665, 1282
SfaNI GCATC 3 cut(s) 474, 706, 1072
SfcI CTRYAG 1 cut(s) 726
SmlI CTYRAG 2 cut(s) 509, 737
SmoI CTYRAG 2 cut(s) 509, 737
Sse9I AATT 4 cut(s) 179, 365, 403, 1332
SseBI AGGCCT 2 cut(s) 206, 853
SsiI CCGC 3 cut(s) 441, 599, 883
SspI AATATT 1 cut(s) 382
SspMI CTAG 5 cut(s) 690, 1074, 1142, 1376, 1419
StuI AGGCCT 2 cut(s) 206, 853
StyD4I CCNGG 2 cut(s) 230, 373
StyI CCWWGG 1 cut(s) 1105
TaaI ACNGT 3 cut(s) 157, 861, 1160
TaqI TCGA 7 cut(s) 261, 291, 535, 760, 1080, 1271, 1311
TaqII GACCGA 1 cut(s) 1021
TasI AATT 4 cut(s) 179, 365, 403, 1332
TatI WGTACW 2 cut(s) 500, 939
TauI GCSGC 1 cut(s) 602
TfiI GAWTC 8 cut(s) 350, 576, 641, 920, 1077, 1136, 1149, 1294
Tru1I TTAA 5 cut(s) 42, 186, 209, 303, 510
Tru9I TTAA 5 cut(s) 42, 186, 209, 303, 510
TscAI CASTG 4 cut(s) 815, 864, 1165, 1416
TseFI GTSAC 4 cut(s) 157, 694, 1325, 1345
Tsp45I GTSAC 4 cut(s) 157, 694, 1325, 1345
TspDTI ATGAA 9 cut(s) 17, 277, 288, 342, 661, 1014, 1169, 1279, 1307
TspGWI ACGGA 1 cut(s) 1344
TspRI CASTG 4 cut(s) 815, 864, 1165, 1416
Vha464I CTTAAG 1 cut(s) 509
XbaI TCTAGA 2 cut(s) 1073, 1141
XceI RCATGY 1 cut(s) 658
XmiI GTMKAC 1 cut(s) 1311
XmnI GAANNNNTTC 1 cut(s) 365
XspI CTAG 5 cut(s) 690, 1074, 1142, 1376, 1419
ZrmI AGTACT 1 cut(s) 941
Zsp2I ATGCAT 2 cut(s) 467, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.