Rorug06G0329600

Salutaridinol 7-O-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0018386
Physical Location & Seq
Reverse (-)
48291666 .. 48292474
809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0329600.1

Sequence Viewer

Length: 597 bp
ATGGAGCTACAAACCCAGCAACAAATCGAGGATGGAGGAAACAACCAAGCAGTCGGGAGTAGTGCCAACACGGATTTCTGGCGAAGCCGTACCAGGTGGATTCCTACTCCAGATCAAATAAGAATCCTCAAGGATCTTTACTATGACAAGGGAGTTAAGAACCCAACTACAGAGCATATTCACGAGATCTGTCTCCAGCTGCAACAGTATGGACAGGTTGAGGGCAAGAACATTTATTTTTGGTTCCAGAATGTCAGGGCTCGAGAGAAGCAGATGAAGAGGTGCAATCAGGCTGCTCAAGTGCCCATGGGAACTAGTTCTCCTGGTACTGGTGGATCCATTGATCTCAATTTTGGGTCCACTGGTTCTACTGGTGCTGGAGGAAAACCATCCCTGCAACAACGAGGAGGAGATCACCAGGAGGTTGAAACTCTTCCTCTGTTCCCCGTGCACGGCGAGGACTTCTTTGGTAACCCGAAGACTACTTCCGAGGAAGGTAGCGCATTTGGTTACTATTCTGGTGACTCAGGCGGTTACAACAGTGGCTCTAACGTTTCTCTTGAGCTCAGCCTCAATCCATCCGGAGCTGCTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

198

Amino Acids

21.6

Weight (kDa)

5.21

Isoelectric Point (pI)

46.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 30 - 91 3.4e-10 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018386)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g37440
malus_domestica MD15G1001600.v1.1
prunus_persica Prupe.1G354400_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0304281
rosa_laevigata RLG00000010995
rosa_multiflora Rmu_sc0001652.1_g000008
rosa_roxburghii Rroxscaffold_7G00163880
rosa_rugosa Rorug06G0329600
rosa_samantha Rh6BG459400
rosa_wichuraiana Rw6G038440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 581
AciI CCGC 1 cut(s) 531
AclI AACGTT 1 cut(s) 552
AclWI GGATC 3 cut(s) 141, 330, 343
AfaI GTAC 2 cut(s) 91, 328
AfiI CCNNNNNNNGG 2 cut(s) 329, 452
AgsI TTSAA 1 cut(s) 428
AhlI ACTAGT 1 cut(s) 314
AjnI CCWGG 3 cut(s) 92, 322, 417
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AloI GAACNNNNNNTCC 2 cut(s) 304, 336
AluBI AGCT 4 cut(s) 7, 199, 565, 587
AluI AGCT 4 cut(s) 7, 199, 565, 587
Alw21I GWGCWC 2 cut(s) 453, 567
Alw26I GTCTC 1 cut(s) 197
Alw44I GTGCAC 1 cut(s) 449
AlwI GGATC 3 cut(s) 141, 330, 343
Ama87I CYCGRG 1 cut(s) 261
Aor13HI TCCGGA 1 cut(s) 581
ApaLI GTGCAC 1 cut(s) 449
ApeKI GCWGC 3 cut(s) 199, 293, 587
Asp700I GAANNNNTTC 2 cut(s) 316, 432
AspLEI GCGC 1 cut(s) 503
AspS9I GGNCC 1 cut(s) 357
AsuHPI GGTGA 2 cut(s) 407, 533
AvaI CYCGRG 1 cut(s) 261
AvaII GGWCC 1 cut(s) 357
BaeGI GKGCMC 2 cut(s) 306, 453
BamHI GGATCC 1 cut(s) 335
BanII GRGCYC 2 cut(s) 262, 567
BauI CACGAG 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 485
Bbv12I GWGCWC 2 cut(s) 453, 567
BbvI GCAGC 3 cut(s) 186, 280, 574
BccI CCATC 3 cut(s) 26, 397, 586
BceAI ACGGC 2 cut(s) 72, 469
BciT130I CCWGG 3 cut(s) 94, 324, 419
BcoDI GTCTC 1 cut(s) 197
BcuI ACTAGT 1 cut(s) 314
BfaI CTAG 2 cut(s) 315, 595
BfmI CTRYAG 1 cut(s) 168
BglII AGATCT 1 cut(s) 186
BisI GCNGC 3 cut(s) 200, 294, 588
BlpI GCTNAGC 1 cut(s) 566
BlsI GCNGC 3 cut(s) 201, 295, 589
Bme1390I CCNGG 3 cut(s) 94, 324, 419
Bme18I GGWCC 1 cut(s) 357
BmeT110I CYCGRG 1 cut(s) 261
BmgT120I GGNCC 1 cut(s) 357
BmiI GGNNCC 3 cut(s) 245, 337, 358
BmrFI CCNGG 3 cut(s) 94, 324, 419
BpiI GAAGAC 1 cut(s) 485
BpmI CTGGAG 3 cut(s) 93, 179, 399
Bpu1102I GCTNAGC 1 cut(s) 566
BpuEI CTTGAG 3 cut(s) 113, 282, 581
BsaJI CCNNGG 2 cut(s) 306, 489
BsaWI WCCGGW 1 cut(s) 581
BsaXI ACNNNNNCTCC 2 cut(s) 304, 334
Bsc4I CCNNNNNNNGG 2 cut(s) 329, 452
Bse1I ACTGG 3 cut(s) 334, 367, 376
BseAI TCCGGA 1 cut(s) 581
BseBI CCWGG 3 cut(s) 94, 324, 419
BseDI CCNNGG 2 cut(s) 306, 489
BseGI GGATG 3 cut(s) 37, 389, 578
BseLI CCNNNNNNNGG 2 cut(s) 329, 452
BseMII CTCAG 2 cut(s) 540, 580
BseNI ACTGG 3 cut(s) 334, 367, 376
BseRI GAGGAG 2 cut(s) 420, 423
BseSI GKGCMC 2 cut(s) 306, 453
BseXI GCAGC 3 cut(s) 186, 280, 574
BseYI CCCAGC 1 cut(s) 15
BsiHKAI GWGCWC 2 cut(s) 453, 567
BsiHKCI CYCGRG 1 cut(s) 261
BsiSI CCGG 1 cut(s) 582
BslI CCNNNNNNNGG 2 cut(s) 329, 452
BsmAI GTCTC 1 cut(s) 197
BsoBI CYCGRG 1 cut(s) 261
Bsp1286I GDGCHC 4 cut(s) 262, 306, 453, 567
Bsp13I TCCGGA 1 cut(s) 581
Bsp143I GATC 6 cut(s) 112, 133, 186, 335, 343, 412
Bsp1720I GCTNAGC 1 cut(s) 566
Bsp19I CCATGG 1 cut(s) 306
BspACI CCGC 1 cut(s) 531
BspCNI CTCAG 2 cut(s) 539, 579
BspEI TCCGGA 1 cut(s) 581
BspLI GGNNCC 3 cut(s) 245, 337, 358
BspPI GGATC 3 cut(s) 141, 330, 343
BsrI ACTGG 3 cut(s) 334, 367, 376
BssECI CCNNGG 2 cut(s) 306, 489
BssMI GATC 6 cut(s) 112, 133, 186, 335, 343, 412
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 306
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 3 cut(s) 94, 324, 419
Bst4CI ACNGT 2 cut(s) 207, 542
Bst6I CTCTTC 2 cut(s) 272, 438
BstDEI CTNAG 2 cut(s) 526, 566
BstDSI CCRYGG 1 cut(s) 306
BstEII GGTNACC 1 cut(s) 470
BstF5I GGATG 3 cut(s) 37, 389, 578
BstHHI GCGC 1 cut(s) 503
BstKTI GATC 6 cut(s) 115, 136, 189, 338, 346, 415
BstMAI GTCTC 1 cut(s) 197
BstMBI GATC 6 cut(s) 112, 133, 186, 335, 343, 412
BstNI CCWGG 3 cut(s) 94, 324, 419
BstPI GGTNACC 1 cut(s) 470
BstSCI CCNGG 3 cut(s) 92, 322, 417
BstSFI CTRYAG 1 cut(s) 168
BstSLI GKGCMC 2 cut(s) 306, 453
BstV1I GCAGC 3 cut(s) 186, 280, 574
BstV2I GAAGAC 1 cut(s) 485
BstX2I RGATCY 3 cut(s) 133, 186, 335
BstYI RGATCY 3 cut(s) 133, 186, 335
BtgI CCRYGG 1 cut(s) 306
BtsCI GGATG 3 cut(s) 37, 389, 578
BtsIMutI CAGTG 2 cut(s) 360, 547
CfoI GCGC 1 cut(s) 503
Cfr13I GGNCC 1 cut(s) 357
CsiI ACCWGGT 1 cut(s) 92
Csp6I GTAC 2 cut(s) 90, 327
CviAII CATG 1 cut(s) 307
CviJI RGCY 9 cut(s) 7, 87, 199, 260, 293, 546, 565, 570, 587
CviKI_1 RGCY 9 cut(s) 7, 87, 199, 260, 293, 546, 565, 570, 587
CviQI GTAC 2 cut(s) 90, 327
DdeI CTNAG 2 cut(s) 526, 566
DpnI GATC 6 cut(s) 114, 135, 188, 337, 345, 414
DpnII GATC 6 cut(s) 112, 133, 186, 335, 343, 412
Eam1104I CTCTTC 2 cut(s) 272, 438
EarI CTCTTC 2 cut(s) 272, 438
Ecl136II GAGCTC 1 cut(s) 565
Eco130I CCWWGG 1 cut(s) 306
Eco24I GRGCYC 2 cut(s) 262, 567
Eco47I GGWCC 1 cut(s) 357
Eco53kI GAGCTC 1 cut(s) 565
Eco88I CYCGRG 1 cut(s) 261
Eco91I GGTNACC 1 cut(s) 470
EcoICRI GAGCTC 1 cut(s) 565
EcoO65I GGTNACC 1 cut(s) 470
EcoRII CCWGG 3 cut(s) 92, 322, 417
EcoT14I CCWWGG 1 cut(s) 306
EcoT38I GRGCYC 2 cut(s) 262, 567
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 1 cut(s) 310
FaiI YATR 4 cut(s) 144, 177, 210, 308
FatI CATG 1 cut(s) 306
Fnu4HI GCNGC 3 cut(s) 200, 294, 588
FokI GGATG 3 cut(s) 44, 376, 565
FriOI GRGCYC 2 cut(s) 262, 567
Fsp4HI GCNGC 3 cut(s) 200, 294, 588
FspBI CTAG 2 cut(s) 315, 595
GlaI GCGC 1 cut(s) 502
GluI GCNGC 3 cut(s) 200, 294, 588
GsaI CCCAGC 1 cut(s) 19
GsuI CTGGAG 3 cut(s) 93, 179, 399
HapII CCGG 1 cut(s) 582
HhaI GCGC 1 cut(s) 503
Hin1II CATG 1 cut(s) 310
Hin6I GCGC 1 cut(s) 501
HinP1I GCGC 1 cut(s) 501
HinfI GANTC 3 cut(s) 100, 123, 524
HpaII CCGG 1 cut(s) 582
HphI GGTGA 2 cut(s) 407, 533
Hpy166II GTNNAC 2 cut(s) 360, 451
Hpy188I TCNGA 1 cut(s) 490
Hpy188III TCNNGA 7 cut(s) 55, 110, 182, 247, 263, 560, 582
Hpy8I GTNNAC 2 cut(s) 360, 451
HpyAV CCTTC 1 cut(s) 488
HpyCH4III ACNGT 2 cut(s) 207, 542
HpyCH4IV ACGT 1 cut(s) 552
HpyCH4V TGCA 4 cut(s) 202, 285, 397, 451
HpyF3I CTNAG 2 cut(s) 526, 566
HpySE526I ACGT 1 cut(s) 552
Hsp92II CATG 1 cut(s) 310
HspAI GCGC 1 cut(s) 501
Kpn2I TCCGGA 1 cut(s) 581
Kzo9I GATC 6 cut(s) 112, 133, 186, 335, 343, 412
LmnI GCTCC 2 cut(s) 4, 584
Lsp1109I GCAGC 3 cut(s) 186, 280, 574
MabI ACCWGGT 1 cut(s) 92
MaeI CTAG 2 cut(s) 315, 595
MaeII ACGT 1 cut(s) 552
MaeIII GTNAC 4 cut(s) 470, 509, 521, 533
MalI GATC 6 cut(s) 114, 135, 188, 337, 345, 414
MboI GATC 6 cut(s) 112, 133, 186, 335, 343, 412
MboII GAAGA 3 cut(s) 289, 425, 490
MflI RGATCY 3 cut(s) 133, 186, 335
MhlI GDGCHC 4 cut(s) 262, 306, 453, 567
MluCI AATT 1 cut(s) 349
MlyI GAGTC 1 cut(s) 518
MroI TCCGGA 1 cut(s) 581
MroXI GAANNNNTTC 2 cut(s) 316, 432
MseI TTAA 1 cut(s) 156
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 1 cut(s) 582
MspR9I CCNGG 3 cut(s) 94, 324, 419
MvaI CCWGG 3 cut(s) 94, 324, 419
NcoI CCATGG 1 cut(s) 306
NdeII GATC 6 cut(s) 112, 133, 186, 335, 343, 412
NlaIII CATG 1 cut(s) 310
NlaIV GGNNCC 3 cut(s) 245, 337, 358
NmuCI GTSAC 1 cut(s) 521
PaeR7I CTCGAG 1 cut(s) 261
PdmI GAANNNNTTC 2 cut(s) 316, 432
PfeI GAWTC 2 cut(s) 100, 123
PkrI GCNGC 3 cut(s) 201, 295, 589
PleI GAGTC 1 cut(s) 518
PpsI GAGTC 1 cut(s) 518
Psp124BI GAGCTC 1 cut(s) 567
Psp1406I AACGTT 1 cut(s) 552
Psp6I CCWGG 3 cut(s) 92, 322, 417
PspEI GGTNACC 1 cut(s) 470
PspFI CCCAGC 1 cut(s) 15
PspGI CCWGG 3 cut(s) 92, 322, 417
PspN4I GGNNCC 3 cut(s) 245, 337, 358
PspPI GGNCC 1 cut(s) 357
PsuI RGATCY 3 cut(s) 133, 186, 335
PvuII CAGCTG 1 cut(s) 199
RsaI GTAC 2 cut(s) 91, 328
RsaNI GTAC 2 cut(s) 90, 327
SacI GAGCTC 1 cut(s) 567
SaqAI TTAA 1 cut(s) 156
SatI GCNGC 3 cut(s) 200, 294, 588
Sau3AI GATC 6 cut(s) 112, 133, 186, 335, 343, 412
Sau96I GGNCC 1 cut(s) 357
SchI GAGTC 1 cut(s) 518
ScrFI CCNGG 3 cut(s) 94, 324, 419
SduI GDGCHC 4 cut(s) 262, 306, 453, 567
SexAI ACCWGGT 1 cut(s) 92
SfcI CTRYAG 1 cut(s) 168
Sfr274I CTCGAG 1 cut(s) 261
SinI GGWCC 1 cut(s) 357
SlaI CTCGAG 1 cut(s) 261
SmlI CTYRAG 4 cut(s) 128, 261, 297, 560
SmoI CTYRAG 4 cut(s) 128, 261, 297, 560
SpeI ACTAGT 1 cut(s) 314
Sse9I AATT 1 cut(s) 349
SsiI CCGC 1 cut(s) 531
SspMI CTAG 2 cut(s) 315, 595
SstI GAGCTC 1 cut(s) 567
StyD4I CCNGG 3 cut(s) 92, 322, 417
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 2 cut(s) 207, 542
TaiI ACGT 1 cut(s) 555
TaqI TCGA 2 cut(s) 27, 262
TasI AATT 1 cut(s) 349
TfiI GAWTC 2 cut(s) 100, 123
Tru1I TTAA 1 cut(s) 156
Tru9I TTAA 1 cut(s) 156
TscAI CASTG 2 cut(s) 367, 547
TseFI GTSAC 1 cut(s) 521
TseI GCWGC 3 cut(s) 199, 293, 587
Tsp45I GTSAC 1 cut(s) 521
TspDTI ATGAA 1 cut(s) 290
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 2 cut(s) 367, 547
VneI GTGCAC 1 cut(s) 449
VpaK11BI GGWCC 1 cut(s) 357
XhoI CTCGAG 1 cut(s) 261
XmnI GAANNNNTTC 2 cut(s) 316, 432
XspI CTAG 2 cut(s) 315, 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.