RLG00000010995

Salutaridinol 7-O-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0018386
Physical Location & Seq
Forward (+)
5870137 .. 5871597
1461 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010995

Sequence Viewer

Length: 1461 bp
ATGAAGGTCTTGCAGGTAGAAGTTTTTTCTGAAGAGAAGATTAAACCGTCTTTCCCAACACCCTCTCACCTCAGAACCTTCAAGCTTTCCCTTCTTGATCAGCTCATACCAGCTCCCTATGCTCCCATTATTCTCTTTTATGATCCCATTACAACCATTACCACCACCAAAAGACTAGATGTGCTGAAGGCATCTTTATCCGAGGCCTTGACTGAGTTCTACCCCCTTGCCGGGAAGCTCAAAGATGATGAGCTATCTGTTGAGTGCAACGATGAAGGAGTTGCCTTCATCGAAGCCAGAGTTAAGTCCTTTTCCCTTCACGAGTTTCTCAGCCGTCCTGAACTTTTTGATCCGTTGCTGAACCAATTCCTCCCTGGAAATATTACTCATACGAATAGTAGCAATTTTATTACAAACATCAATTTTATTACAAACATCCAAACAAATGTGTTCAAGTGCGGTGGCATTGCCATTGGCATATGCATCTCACACAAGCTCCTTGATGGTGCTGCCTTGTGCACTTTCCTCAAGTCATGGACTGCTATTGGTCGTCGACTAGTATCAGGATCAGCGGAGAAAGCAGCACTACCGCGTATATCCCCCAACTTATTTGCTGCGGCTTCTTTGTTCCCCACAAATGGCGATCTGTGGCTTAGAGATTCCTCACTTCACATGTGGGGCTCCTTGTTCATAAAAGGCAAGGAGTCTAGTGTCACAAAAAGATTTGTGTTTGATGCCTCGGCTATAGCCACCCTCAAGCTCAACGCTCGAATGGCTAGAAAGAAACCACCCACGCGCGTTGAGGTGGTTTCGGCTTTCTTGTGGCAGTGCTGCATGGCTGCCTCTAAAGAGAAACATGGTGTCCAAAGGCCTTCACTGCTGACACATATTGTGAACCTCCGCTCAAAACTACTGACTGCAATGGATGATTCCGATTCCGATCTTGAGCACTCCACCGGAAACCTCCTTTGGATGGCAGCCGCACGATCTTATATCGGAGATGTCGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGCAGCAGAACTTGCTCTTGCCAGGCTTGGTGAGTGAGTTGAGGAATGCATTGTCGAAGATTGATGCTGATTTTGCCAAAGAAATCCGAGGAAAGCAAGGGAAGTCTCTAATGATTGATTCTCTGAAGGGAATCATGAACAGTGATGGGTTGGATTTAGATTATTATGGGTTTAGCAGTTGGTGCAAGTTTGGGTGGTACGAAGCTGCTGATTTTGGGTGGGGGAAGCCTGCATGGGTGAGCAGCATTGGTTCCAGTAGTGCTCCTCATTTCATGAATCTGATCATTTTGGTGGACACAAAGTCCGGTGACGGAATCGAAGCATGGGTCACCTTGGATCAGCGTCAGATGGCTCTACTGGAAGGCAACTCCAACCTTCAGAAATTGGTTTCAGTGGATCCTAGTCCTTTGATCTTAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

487

Amino Acids

53.85

Weight (kDa)

5.43

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 469 3.5e-71 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018386)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g37440
malus_domestica MD15G1001600.v1.1
prunus_persica Prupe.1G354400_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0304281
rosa_laevigata RLG00000010995
rosa_multiflora Rmu_sc0001652.1_g000008
rosa_roxburghii Rroxscaffold_7G00163880
rosa_rugosa Rorug06G0329600
rosa_samantha Rh6BG459400
rosa_wichuraiana Rw6G038440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 903
AccI GTMKAC 1 cut(s) 553
AccII CGCG 3 cut(s) 592, 796, 798
AciI CCGC 6 cut(s) 459, 572, 590, 617, 901, 981
AclWI GGATC 6 cut(s) 137, 344, 574, 1383, 1430, 1443
AcuI CTGAAG 4 cut(s) 51, 206, 1184, 1400
AfaI GTAC 1 cut(s) 1238
AfiI CCNNNNNNNGG 4 cut(s) 230, 231, 638, 973
AflIII ACRYGT 1 cut(s) 672
AgsI TTSAA 2 cut(s) 82, 454
AhdI GACNNNNNGTC 1 cut(s) 1339
AhlI ACTAGT 1 cut(s) 556
AjnI CCWGG 2 cut(s) 373, 1060
AjuI GAANNNNNNNTTGG 2 cut(s) 952, 984
AluBI AGCT 8 cut(s) 85, 103, 113, 238, 253, 496, 760, 1244
AluI AGCT 8 cut(s) 85, 103, 113, 238, 253, 496, 760, 1244
Alw21I GWGCWC 3 cut(s) 521, 951, 1303
Alw26I GTCTC 1 cut(s) 1149
Alw44I GTGCAC 1 cut(s) 517
AlwI GGATC 6 cut(s) 137, 344, 574, 1383, 1430, 1443
AoxI GGCC 2 cut(s) 204, 869
ApaLI GTGCAC 1 cut(s) 517
ApeKI GCWGC 9 cut(s) 509, 581, 614, 831, 839, 977, 1042, 1244, 1281
ArsI GACNNNNNNTTYG 2 cut(s) 1350, 1382
Asp700I GAANNNNTTC 1 cut(s) 365
AspLEI GCGC 1 cut(s) 798
AsuC2I CCSGG 1 cut(s) 232
AsuHPI GGTGA 5 cut(s) 59, 1081, 1288, 1358, 1360
BaeGI GKGCMC 1 cut(s) 521
BamHI GGATCC 1 cut(s) 1435
BanII GRGCYC 1 cut(s) 683
BauI CACGAG 1 cut(s) 320
Bbv12I GWGCWC 3 cut(s) 521, 951, 1303
BbvI GCAGC 9 cut(s) 496, 593, 601, 818, 826, 989, 1054, 1231, 1293
BccI CCATC 4 cut(s) 497, 967, 1178, 1381
BceAI ACGGC 1 cut(s) 318
BciT130I CCWGG 2 cut(s) 375, 1062
BclI TGATCA 2 cut(s) 97, 1320
BcnI CCSGG 1 cut(s) 232
BcoDI GTCTC 1 cut(s) 1149
BcuI ACTAGT 1 cut(s) 556
BfaI CTAG 5 cut(s) 176, 557, 708, 777, 1440
BfmI CTRYAG 1 cut(s) 744
BfuAI ACCTGC 1 cut(s) 4
Bme1390I CCNGG 3 cut(s) 232, 375, 1062
BmeRI GACNNNNNGTC 1 cut(s) 1339
BmiI GGNNCC 3 cut(s) 682, 1291, 1437
BmrFI CCNGG 3 cut(s) 232, 375, 1062
BmsI GCATC 4 cut(s) 200, 492, 724, 1093
BpuEI CTTGAG 3 cut(s) 512, 740, 965
BpuMI CCSGG 1 cut(s) 232
BsaBI GATNNNNATC 1 cut(s) 939
BsaJI CCNNGG 5 cut(s) 201, 373, 738, 1126, 1371
BsaWI WCCGGW 2 cut(s) 956, 1343
BsaXI ACNNNNNCTCC 2 cut(s) 480, 510
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 231, 638, 973
Bse1I ACTGG 2 cut(s) 1293, 1401
Bse3DI GCAATG 2 cut(s) 465, 927
Bse8I GATNNNNATC 1 cut(s) 939
BseBI CCWGG 2 cut(s) 375, 1062
BseDI CCNNGG 5 cut(s) 201, 373, 738, 1126, 1371
BseGI GGATG 3 cut(s) 435, 931, 978
BseJI GATNNNNATC 1 cut(s) 939
BseLI CCNNNNNNNGG 4 cut(s) 230, 231, 638, 973
BseMI GCAATG 2 cut(s) 465, 927
BseMII CTCAG 3 cut(s) 85, 204, 343
BseNI ACTGG 2 cut(s) 1293, 1401
BseRI GAGGAG 8 cut(s) 1034, 1037, 1040, 1043, 1046, 1049, 1052, 1293
BseSI GKGCMC 1 cut(s) 521
BseXI GCAGC 9 cut(s) 496, 593, 601, 818, 826, 989, 1054, 1231, 1293
Bsh1236I CGCG 3 cut(s) 592, 796, 798
BshFI GGCC 2 cut(s) 206, 871
BsiHKAI GWGCWC 3 cut(s) 521, 951, 1303
BsiSI CCGG 3 cut(s) 231, 957, 1344
BslI CCNNNNNNNGG 4 cut(s) 230, 231, 638, 973
BsmAI GTCTC 1 cut(s) 1149
BsmI GAATGC 1 cut(s) 1090
BsnI GGCC 2 cut(s) 206, 871
Bsp1286I GDGCHC 4 cut(s) 521, 683, 951, 1303
BspACI CCGC 6 cut(s) 459, 572, 590, 617, 901, 981
BspANI GGCC 2 cut(s) 206, 871
BspCNI CTCAG 3 cut(s) 84, 205, 342
BspFNI CGCG 3 cut(s) 592, 796, 798
BspHI TCATGA 2 cut(s) 1173, 1311
BspLI GGNNCC 3 cut(s) 682, 1291, 1437
BspMI ACCTGC 1 cut(s) 4
BspPI GGATC 6 cut(s) 137, 344, 574, 1383, 1430, 1443
BsrBI CCGCTC 1 cut(s) 903
BsrDI GCAATG 2 cut(s) 465, 927
BsrI ACTGG 2 cut(s) 1293, 1401
BssECI CCNNGG 5 cut(s) 201, 373, 738, 1126, 1371
BssSI CACGAG 1 cut(s) 320
BssT1I CCWWGG 1 cut(s) 1371
Bst2BI CACGAG 1 cut(s) 320
Bst2UI CCWGG 2 cut(s) 375, 1062
Bst4CI ACNGT 2 cut(s) 48, 1181
Bst6I CTCTTC 1 cut(s) 27
BstAPI GCANNNNNTGC 2 cut(s) 1051, 1221
BstC8I GCNNGC 1 cut(s) 1269
BstDEI CTNAG 4 cut(s) 71, 213, 329, 653
BstEII GGTNACC 1 cut(s) 1366
BstF5I GGATG 3 cut(s) 435, 931, 978
BstFNI CGCG 3 cut(s) 592, 796, 798
BstHHI GCGC 1 cut(s) 798
BstMAI GTCTC 1 cut(s) 1149
BstMWI GCNNNNNNNGC 7 cut(s) 119, 578, 773, 877, 1051, 1112, 1221
BstNI CCWGG 2 cut(s) 375, 1062
BstNSI RCATGY 1 cut(s) 676
BstPI GGTNACC 1 cut(s) 1366
BstSCI CCNGG 3 cut(s) 230, 373, 1060
BstSFI CTRYAG 1 cut(s) 744
BstSLI GKGCMC 1 cut(s) 521
BstUI CGCG 3 cut(s) 592, 796, 798
BstV1I GCAGC 9 cut(s) 496, 593, 601, 818, 826, 989, 1054, 1231, 1293
BstX2I RGATCY 1 cut(s) 1435
BstYI RGATCY 1 cut(s) 1435
BsuRI GGCC 2 cut(s) 206, 871
BtsCI GGATG 3 cut(s) 435, 931, 978
BtsI GCAGTG 2 cut(s) 833, 875
BtsIMutI CAGTG 4 cut(s) 833, 875, 1186, 1437
BveI ACCTGC 1 cut(s) 4
Cac8I GCNNGC 1 cut(s) 1269
CciI TCATGA 2 cut(s) 1173, 1311
CfoI GCGC 1 cut(s) 798
CseI GACGC 1 cut(s) 1370
Csp6I GTAC 1 cut(s) 1237
CspCI CAANNNNNGTGG 4 cut(s) 442, 477, 781, 816
CviAII CATG 8 cut(s) 534, 673, 835, 857, 1174, 1272, 1312, 1362
CviQI GTAC 1 cut(s) 1237
DdeI CTNAG 4 cut(s) 71, 213, 329, 653
DriI GACNNNNNGTC 1 cut(s) 1339
Eam1104I CTCTTC 1 cut(s) 27
Eam1105I GACNNNNNGTC 1 cut(s) 1339
EarI CTCTTC 1 cut(s) 27
Eco130I CCWWGG 1 cut(s) 1371
Eco147I AGGCCT 2 cut(s) 206, 871
Eco24I GRGCYC 1 cut(s) 683
Eco57I CTGAAG 4 cut(s) 51, 206, 1184, 1400
Eco91I GGTNACC 1 cut(s) 1366
EcoO65I GGTNACC 1 cut(s) 1366
EcoRII CCWGG 2 cut(s) 373, 1060
EcoT14I CCWWGG 1 cut(s) 1371
EcoT22I ATGCAT 2 cut(s) 485, 1090
EcoT38I GRGCYC 1 cut(s) 683
ErhI CCWWGG 1 cut(s) 1371
FaeI CATG 8 cut(s) 537, 676, 838, 860, 1177, 1275, 1315, 1365
FatI CATG 8 cut(s) 533, 672, 834, 856, 1173, 1271, 1311, 1361
FauNDI CATATG 1 cut(s) 479
FbaI TGATCA 2 cut(s) 97, 1320
FblI GTMKAC 1 cut(s) 553
FokI GGATG 3 cut(s) 422, 938, 985
FriOI GRGCYC 1 cut(s) 683
FspBI CTAG 5 cut(s) 176, 557, 708, 777, 1440
GlaI GCGC 1 cut(s) 797
HaeIII GGCC 2 cut(s) 206, 871
HapII CCGG 3 cut(s) 231, 957, 1344
HgaI GACGC 1 cut(s) 1370
HhaI GCGC 1 cut(s) 798
Hin1II CATG 8 cut(s) 537, 676, 838, 860, 1177, 1275, 1315, 1365
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HincII GTYRAC 1 cut(s) 554
HindII GTYRAC 1 cut(s) 554
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 8 cut(s) 659, 704, 929, 935, 1157, 1170, 1315, 1353
HpaII CCGG 3 cut(s) 231, 957, 1344
HphI GGTGA 5 cut(s) 59, 1081, 1288, 1358, 1360
Hpy166II GTNNAC 4 cut(s) 519, 554, 895, 1333
Hpy188III TCNNGA 7 cut(s) 95, 320, 338, 564, 944, 1174, 1312
Hpy8I GTNNAC 4 cut(s) 519, 554, 895, 1333
Hpy99I CGWCG 1 cut(s) 555
HpyCH4III ACNGT 2 cut(s) 48, 1181
HpyCH4V TGCA 9 cut(s) 13, 267, 483, 519, 834, 920, 1088, 1224, 1271
HpyF10VI GCNNNNNNNGC 7 cut(s) 119, 578, 773, 877, 1051, 1112, 1221
HpyF3I CTNAG 4 cut(s) 71, 213, 329, 653
Hsp92II CATG 8 cut(s) 537, 676, 838, 860, 1177, 1275, 1315, 1365
HspAI GCGC 1 cut(s) 796
Ksp22I TGATCA 2 cut(s) 97, 1320
LmnI GCTCC 6 cut(s) 118, 127, 501, 686, 1039, 1306
Lsp1109I GCAGC 9 cut(s) 496, 593, 601, 818, 826, 989, 1054, 1231, 1293
LweI GCATC 4 cut(s) 200, 492, 724, 1093
MaeI CTAG 5 cut(s) 176, 557, 708, 777, 1440
MaeIII GTNAC 3 cut(s) 712, 1346, 1366
MbiI CCGCTC 1 cut(s) 903
MboII GAAGA 3 cut(s) 44, 49, 1108
MflI RGATCY 1 cut(s) 1435
MhlI GDGCHC 4 cut(s) 521, 683, 951, 1303
MluCI AATT 5 cut(s) 365, 403, 421, 1421, 1456
MlyI GAGTC 1 cut(s) 713
MmeI TCCRAC 2 cut(s) 1170, 1434
Mph1103I ATGCAT 2 cut(s) 485, 1090
MroXI GAANNNNTTC 1 cut(s) 365
MseI TTAA 4 cut(s) 42, 303, 1454, 1459
MslI CAYNNNNRTG 1 cut(s) 1328
MspA1I CMGCKG 1 cut(s) 572
MspI CCGG 3 cut(s) 231, 957, 1344
MspR9I CCNGG 3 cut(s) 232, 375, 1062
Mva1269I GAATGC 1 cut(s) 1090
MvaI CCWGG 2 cut(s) 375, 1062
MvnI CGCG 3 cut(s) 592, 796, 798
MwoI GCNNNNNNNGC 7 cut(s) 119, 578, 773, 877, 1051, 1112, 1221
NciI CCSGG 1 cut(s) 232
NdeI CATATG 1 cut(s) 479
NlaIII CATG 8 cut(s) 537, 676, 838, 860, 1177, 1275, 1315, 1365
NlaIV GGNNCC 3 cut(s) 682, 1291, 1437
NmeAIII GCCGAG 1 cut(s) 719
NmuCI GTSAC 3 cut(s) 712, 1346, 1366
NsiI ATGCAT 2 cut(s) 485, 1090
NspI RCATGY 1 cut(s) 676
PagI TCATGA 2 cut(s) 1173, 1311
PceI AGGCCT 2 cut(s) 206, 871
PciI ACATGT 1 cut(s) 672
PcsI WCGNNNNNNNCGW 1 cut(s) 1002
PctI GAATGC 1 cut(s) 1090
PdmI GAANNNNTTC 1 cut(s) 365
PfeI GAWTC 7 cut(s) 659, 929, 935, 1157, 1170, 1315, 1353
PleI GAGTC 1 cut(s) 712
PpsI GAGTC 1 cut(s) 712
PscI ACATGT 1 cut(s) 672
Psp6I CCWGG 2 cut(s) 373, 1060
PspEI GGTNACC 1 cut(s) 1366
PspGI CCWGG 2 cut(s) 373, 1060
PspN4I GGNNCC 3 cut(s) 682, 1291, 1437
PsuI RGATCY 1 cut(s) 1435
RsaI GTAC 1 cut(s) 1238
RsaNI GTAC 1 cut(s) 1237
RseI CAYNNNNRTG 1 cut(s) 1328
SalI GTCGAC 1 cut(s) 552
SaqAI TTAA 4 cut(s) 42, 303, 1454, 1459
SchI GAGTC 1 cut(s) 713
ScrFI CCNGG 3 cut(s) 232, 375, 1062
SduI GDGCHC 4 cut(s) 521, 683, 951, 1303
SfaNI GCATC 4 cut(s) 200, 492, 724, 1093
SfcI CTRYAG 1 cut(s) 744
SmiMI CAYNNNNRTG 1 cut(s) 1328
SmlI CTYRAG 3 cut(s) 527, 755, 944
SmoI CTYRAG 3 cut(s) 527, 755, 944
SpeI ACTAGT 1 cut(s) 556
Sse9I AATT 5 cut(s) 365, 403, 421, 1421, 1456
SseBI AGGCCT 2 cut(s) 206, 871
SsiI CCGC 6 cut(s) 459, 572, 590, 617, 901, 981
SspI AATATT 1 cut(s) 382
SspMI CTAG 5 cut(s) 176, 557, 708, 777, 1440
StuI AGGCCT 2 cut(s) 206, 871
StyD4I CCNGG 3 cut(s) 230, 373, 1060
StyI CCWWGG 1 cut(s) 1371
TaaI ACNGT 2 cut(s) 48, 1181
TaqI TCGA 6 cut(s) 291, 553, 769, 1005, 1094, 1356
TasI AATT 5 cut(s) 365, 403, 421, 1421, 1456
TauI GCSGC 2 cut(s) 620, 983
TfiI GAWTC 7 cut(s) 659, 929, 935, 1157, 1170, 1315, 1353
Tru1I TTAA 4 cut(s) 42, 303, 1454, 1459
Tru9I TTAA 4 cut(s) 42, 303, 1454, 1459
TscAI CASTG 4 cut(s) 833, 882, 1186, 1437
TseFI GTSAC 3 cut(s) 712, 1346, 1366
TseI GCWGC 9 cut(s) 509, 581, 614, 831, 839, 977, 1042, 1244, 1281
Tsp45I GTSAC 3 cut(s) 712, 1346, 1366
TspDTI ATGAA 7 cut(s) 17, 277, 288, 679, 1190, 1300, 1328
TspGWI ACGGA 2 cut(s) 342, 1365
TspRI CASTG 4 cut(s) 833, 882, 1186, 1437
VneI GTGCAC 1 cut(s) 517
XceI RCATGY 1 cut(s) 676
XcmI CCANNNNNNNNNTGG 1 cut(s) 371
XmiI GTMKAC 1 cut(s) 553
XmnI GAANNNNTTC 1 cut(s) 365
XspI CTAG 5 cut(s) 176, 557, 708, 777, 1440
Zsp2I ATGCAT 2 cut(s) 485, 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.