Rh6BG459400

Salutaridinol 7-O-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0018386
Physical Location & Seq
Forward (+)
67055410 .. 67056858
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG459400.1

Sequence Viewer

Length: 1449 bp
ATGAAGGTATTGCAGGTAGAAGTTTTTTCTGAAGAGAAGATTAAACCATCTTTCCCAACACCCTCTCACCTCAGAACCTTCAAGCTTTCCCTTCTTGATCAGCTCATACCAGCTCCCTATGCTCCCATTATTCTCTTTTATTATCCCATTACTACCATTACCACCACCAAAAGACTAGATGTGCTGAAGGCATCTTTATCCGAGGCCTTGACTGAGTTCTACCCCCTTGCCGGGAAGCTCAAAGATGATGAGCTATCTGTTGAGTGCAACGATGAAGGAGCTGCCTTCATCGAAGCCAGAGTTAAGTCCTTTTCCCTTCACGAGTTTCTCAGCCGTCCTGAACTTTTTGATTCGTTGCTGAACCAATTCCTCCCTGGAAATATTACTCATACGAGTAGTAGCAATTTTATTACAAACATCCAAGCAAATGTGTTCAAGTGCGGTGGCATTGCCATTGGCCTATGCATCTCACACAAGCTCCTTGATGGTGCTGCCTTGTGCACTTTCCTCAAGTCATGGACTGCTATTGGTCGTCGACTAGTATCAGGATCATCGGAGAAAGCAGCAGCACCGCGTATATCCCCCAACTTATTTGCTGCGGCTTCTTTGTTCCCCACAAATGGCGATCTGTGGCTTAGAGATTCCTCTCTTCACATGTGGGGCTCCTTGTTCATAAAAGGCAAGGAGTCTAGTGTCACAAAAAGATTTGTGTTTGATGCCTCGGCTATAGCCACCCTCAAGCTCAACACTCAAATGGCTCGAAAGAAACCACCCACGCGCGTTGAGGTGGTTACGGCTTTCTTGTGGCAGTGCTGCATGGCTGTCTCTAAAGAGAAACATGGTGTCCAAAGGCCTTCACTGCTGACACATATTGTGAACCTCCGCTCAAAACTACGGACTGCAATGGATGATTCCGATTCCGATTCCGATCTTGAGCACTCCACCGGAAACCTCCTTTGGATGGCAGCCGCACGATCTTATATCGGAGATGTCGATGATGATGGTGATGATGAGGAGGAGGAGCAGCAGCAGCAGAACTTGGTCTTGCCAGGCTTGGTGAGTGAGTTGAGTAATGCATTGTCGAAGATTGATGCTGATTTTGCCAAAGAAATCCGAGGGAAGCAAGGGAAGTCTCTATTGATTGATTCTCTGGAGGGAATCATGAACAGTGATGGGTTGGATTTAGATTATTATGGGTTTAGCAGTTGGTGCAAGTTTGGGTGGTACGAAGCTGCTGATTTTGGGTGGGGGAAGCCTGCATGGGTAAGCAGCATTGGTTCCAGTAGTGCTCCTCATTTCATGAATCTGATCATTTTGGTGGACACAAAGTCCGGTGACGGAATCGAAGCATGGGTCACCTTGGATCAGCGTCAGATGGCTCTACTGGAAGGCAACTCCAACCTTCAGAAATTGGTTTCAGTGGATCCTAGTCCTTTGATCTTAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110
Pfam Domains
Protein Families
Transferase

Protein Analysis

482

Amino Acids

53.17

Weight (kDa)

5.41

Isoelectric Point (pI)

43.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 465 3.7e-70 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018386)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g37440
malus_domestica MD15G1001600.v1.1
prunus_persica Prupe.1G354400_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0304281
rosa_laevigata RLG00000010995
rosa_multiflora Rmu_sc0001652.1_g000008
rosa_roxburghii Rroxscaffold_7G00163880
rosa_rugosa Rorug06G0329600
rosa_samantha Rh6BG459400
rosa_wichuraiana Rw6G038440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 4
AccBSI CCGCTC 1 cut(s) 885
AccI GTMKAC 1 cut(s) 535
AccII CGCG 3 cut(s) 574, 778, 780
AciI CCGC 5 cut(s) 441, 572, 599, 883, 969
AclWI GGATC 4 cut(s) 556, 1371, 1418, 1431
AcuI CTGAAG 3 cut(s) 51, 206, 1388
AfaI GTAC 1 cut(s) 1226
AfiI CCNNNNNNNGG 4 cut(s) 230, 231, 620, 961
AflIII ACRYGT 1 cut(s) 654
AgsI TTSAA 2 cut(s) 82, 436
AhdI GACNNNNNGTC 1 cut(s) 1327
AhlI ACTAGT 1 cut(s) 538
AjnI CCWGG 2 cut(s) 373, 1048
AjuI GAANNNNNNNTTGG 2 cut(s) 940, 972
AluBI AGCT 9 cut(s) 85, 103, 113, 238, 253, 281, 478, 742, 1232
AluI AGCT 9 cut(s) 85, 103, 113, 238, 253, 281, 478, 742, 1232
Alw21I GWGCWC 3 cut(s) 503, 939, 1291
Alw26I GTCTC 2 cut(s) 829, 1137
Alw44I GTGCAC 1 cut(s) 499
AlwI GGATC 4 cut(s) 556, 1371, 1418, 1431
AoxI GGCC 3 cut(s) 204, 457, 851
ApaLI GTGCAC 1 cut(s) 499
ArsI GACNNNNNNTTYG 2 cut(s) 1338, 1370
Asp700I GAANNNNTTC 1 cut(s) 365
AspLEI GCGC 1 cut(s) 780
AsuC2I CCSGG 1 cut(s) 232
AsuHPI GGTGA 5 cut(s) 59, 1016, 1069, 1346, 1348
BaeGI GKGCMC 1 cut(s) 503
BamHI GGATCC 1 cut(s) 1423
BanII GRGCYC 1 cut(s) 665
BauI CACGAG 1 cut(s) 320
Bbv12I GWGCWC 3 cut(s) 503, 939, 1291
BccI CCATC 6 cut(s) 55, 479, 955, 995, 1166, 1369
BceAI ACGGC 2 cut(s) 318, 810
BciT130I CCWGG 2 cut(s) 375, 1050
BclI TGATCA 2 cut(s) 97, 1308
BcnI CCSGG 1 cut(s) 232
BcoDI GTCTC 2 cut(s) 829, 1137
BcuI ACTAGT 1 cut(s) 538
BfaI CTAG 4 cut(s) 176, 539, 690, 1428
BfmI CTRYAG 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 4
Bme1390I CCNGG 3 cut(s) 232, 375, 1050
BmeRI GACNNNNNGTC 1 cut(s) 1327
BmiI GGNNCC 3 cut(s) 664, 1279, 1425
BmrFI CCNGG 3 cut(s) 232, 375, 1050
BmsI GCATC 4 cut(s) 200, 474, 706, 1081
BpmI CTGGAG 1 cut(s) 1172
BpuEI CTTGAG 3 cut(s) 494, 722, 953
BpuMI CCSGG 1 cut(s) 232
BsaBI GATNNNNATC 1 cut(s) 927
BsaJI CCNNGG 5 cut(s) 201, 373, 720, 1114, 1359
BsaWI WCCGGW 2 cut(s) 944, 1331
BsaXI ACNNNNNCTCC 2 cut(s) 462, 492
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 231, 620, 961
Bse1I ACTGG 2 cut(s) 1281, 1389
Bse3DI GCAATG 2 cut(s) 447, 909
Bse8I GATNNNNATC 1 cut(s) 927
BseBI CCWGG 2 cut(s) 375, 1050
BseDI CCNNGG 5 cut(s) 201, 373, 720, 1114, 1359
BseGI GGATG 3 cut(s) 417, 913, 966
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 4 cut(s) 230, 231, 620, 961
BseMI GCAATG 2 cut(s) 447, 909
BseMII CTCAG 3 cut(s) 85, 204, 343
BseNI ACTGG 2 cut(s) 1281, 1389
BseRI GAGGAG 4 cut(s) 1028, 1031, 1034, 1281
BseSI GKGCMC 1 cut(s) 503
Bsh1236I CGCG 3 cut(s) 574, 778, 780
BshFI GGCC 3 cut(s) 206, 459, 853
BsiHKAI GWGCWC 3 cut(s) 503, 939, 1291
BsiSI CCGG 3 cut(s) 231, 945, 1332
BslI CCNNNNNNNGG 4 cut(s) 230, 231, 620, 961
BsmAI GTCTC 2 cut(s) 829, 1137
BsnI GGCC 3 cut(s) 206, 459, 853
Bsp1286I GDGCHC 4 cut(s) 503, 665, 939, 1291
Bsp143I GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
BspACI CCGC 5 cut(s) 441, 572, 599, 883, 969
BspANI GGCC 3 cut(s) 206, 459, 853
BspCNI CTCAG 3 cut(s) 84, 205, 342
BspFNI CGCG 3 cut(s) 574, 778, 780
BspHI TCATGA 2 cut(s) 1161, 1299
BspLI GGNNCC 3 cut(s) 664, 1279, 1425
BspMI ACCTGC 1 cut(s) 4
BspPI GGATC 4 cut(s) 556, 1371, 1418, 1431
BsrBI CCGCTC 1 cut(s) 885
BsrDI GCAATG 2 cut(s) 447, 909
BsrI ACTGG 2 cut(s) 1281, 1389
BssECI CCNNGG 5 cut(s) 201, 373, 720, 1114, 1359
BssMI GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
BssSI CACGAG 1 cut(s) 320
BssT1I CCWWGG 1 cut(s) 1359
Bst2BI CACGAG 1 cut(s) 320
Bst2UI CCWGG 2 cut(s) 375, 1050
Bst4CI ACNGT 1 cut(s) 1169
Bst6I CTCTTC 2 cut(s) 27, 654
BstAPI GCANNNNNTGC 1 cut(s) 1209
BstC8I GCNNGC 1 cut(s) 1257
BstDEI CTNAG 4 cut(s) 71, 213, 329, 635
BstEII GGTNACC 1 cut(s) 1354
BstF5I GGATG 3 cut(s) 417, 913, 966
BstFNI CGCG 3 cut(s) 574, 778, 780
BstHHI GCGC 1 cut(s) 780
BstKTI GATC 9 cut(s) 100, 551, 628, 931, 977, 1311, 1366, 1426, 1440
BstMAI GTCTC 2 cut(s) 829, 1137
BstMBI GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
BstMWI GCNNNNNNNGC 5 cut(s) 119, 859, 1030, 1100, 1209
BstNI CCWGG 2 cut(s) 375, 1050
BstNSI RCATGY 1 cut(s) 658
BstPI GGTNACC 1 cut(s) 1354
BstSCI CCNGG 3 cut(s) 230, 373, 1048
BstSFI CTRYAG 1 cut(s) 726
BstSLI GKGCMC 1 cut(s) 503
BstUI CGCG 3 cut(s) 574, 778, 780
BstX2I RGATCY 1 cut(s) 1423
BstYI RGATCY 1 cut(s) 1423
BsuRI GGCC 3 cut(s) 206, 459, 853
BtsCI GGATG 3 cut(s) 417, 913, 966
BtsI GCAGTG 2 cut(s) 815, 857
BtsIMutI CAGTG 4 cut(s) 815, 857, 1174, 1425
BveI ACCTGC 1 cut(s) 4
Cac8I GCNNGC 1 cut(s) 1257
CciI TCATGA 2 cut(s) 1161, 1299
CfoI GCGC 1 cut(s) 780
CseI GACGC 1 cut(s) 1358
Csp6I GTAC 1 cut(s) 1225
CspCI CAANNNNNGTGG 4 cut(s) 424, 459, 763, 798
CviAII CATG 8 cut(s) 516, 655, 817, 839, 1162, 1260, 1300, 1350
CviQI GTAC 1 cut(s) 1225
DdeI CTNAG 4 cut(s) 71, 213, 329, 635
DpnI GATC 9 cut(s) 99, 550, 627, 930, 976, 1310, 1365, 1425, 1439
DpnII GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
DriI GACNNNNNGTC 1 cut(s) 1327
Eam1104I CTCTTC 2 cut(s) 27, 654
Eam1105I GACNNNNNGTC 1 cut(s) 1327
EarI CTCTTC 2 cut(s) 27, 654
Eco130I CCWWGG 1 cut(s) 1359
Eco147I AGGCCT 2 cut(s) 206, 853
Eco24I GRGCYC 1 cut(s) 665
Eco57I CTGAAG 3 cut(s) 51, 206, 1388
Eco91I GGTNACC 1 cut(s) 1354
EcoO65I GGTNACC 1 cut(s) 1354
EcoRII CCWGG 2 cut(s) 373, 1048
EcoT14I CCWWGG 1 cut(s) 1359
EcoT22I ATGCAT 2 cut(s) 467, 1078
EcoT38I GRGCYC 1 cut(s) 665
ErhI CCWWGG 1 cut(s) 1359
FaeI CATG 8 cut(s) 519, 658, 820, 842, 1165, 1263, 1303, 1353
FatI CATG 8 cut(s) 515, 654, 816, 838, 1161, 1259, 1299, 1349
FbaI TGATCA 2 cut(s) 97, 1308
FblI GTMKAC 1 cut(s) 535
FokI GGATG 3 cut(s) 404, 920, 973
FriOI GRGCYC 1 cut(s) 665
FspBI CTAG 4 cut(s) 176, 539, 690, 1428
GlaI GCGC 1 cut(s) 779
GsuI CTGGAG 1 cut(s) 1172
HaeIII GGCC 3 cut(s) 206, 459, 853
HapII CCGG 3 cut(s) 231, 945, 1332
HgaI GACGC 1 cut(s) 1358
HhaI GCGC 1 cut(s) 780
Hin1II CATG 8 cut(s) 519, 658, 820, 842, 1165, 1263, 1303, 1353
Hin6I GCGC 1 cut(s) 778
HinP1I GCGC 1 cut(s) 778
HincII GTYRAC 1 cut(s) 536
HindII GTYRAC 1 cut(s) 536
HindIII AAGCTT 1 cut(s) 83
HpaII CCGG 3 cut(s) 231, 945, 1332
HphI GGTGA 5 cut(s) 59, 1016, 1069, 1346, 1348
Hpy166II GTNNAC 4 cut(s) 501, 536, 877, 1321
Hpy188III TCNNGA 8 cut(s) 95, 320, 338, 546, 932, 1151, 1162, 1300
Hpy8I GTNNAC 4 cut(s) 501, 536, 877, 1321
Hpy99I CGWCG 1 cut(s) 537
HpyAV CCTTC 9 cut(s) 88, 101, 181, 269, 295, 326, 864, 1382, 1412
HpyCH4III ACNGT 1 cut(s) 1169
HpyCH4V TGCA 9 cut(s) 13, 267, 465, 501, 816, 902, 1076, 1212, 1259
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 859, 1030, 1100, 1209
HpyF3I CTNAG 4 cut(s) 71, 213, 329, 635
Hsp92II CATG 8 cut(s) 519, 658, 820, 842, 1165, 1263, 1303, 1353
HspAI GCGC 1 cut(s) 778
Ksp22I TGATCA 2 cut(s) 97, 1308
Kzo9I GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
LmnI GCTCC 7 cut(s) 118, 127, 278, 483, 668, 1021, 1294
LweI GCATC 4 cut(s) 200, 474, 706, 1081
MaeI CTAG 4 cut(s) 176, 539, 690, 1428
MaeIII GTNAC 4 cut(s) 694, 790, 1334, 1354
MalI GATC 9 cut(s) 99, 550, 627, 930, 976, 1310, 1365, 1425, 1439
MbiI CCGCTC 1 cut(s) 885
MboI GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
MboII GAAGA 4 cut(s) 44, 49, 641, 1096
MflI RGATCY 1 cut(s) 1423
MhlI GDGCHC 4 cut(s) 503, 665, 939, 1291
MluCI AATT 4 cut(s) 365, 403, 1409, 1444
MlyI GAGTC 1 cut(s) 695
MmeI TCCRAC 2 cut(s) 1158, 1422
Mph1103I ATGCAT 2 cut(s) 467, 1078
MroXI GAANNNNTTC 1 cut(s) 365
MseI TTAA 4 cut(s) 42, 303, 1442, 1447
MslI CAYNNNNRTG 2 cut(s) 752, 1316
MspI CCGG 3 cut(s) 231, 945, 1332
MspR9I CCNGG 3 cut(s) 232, 375, 1050
MvaI CCWGG 2 cut(s) 375, 1050
MvnI CGCG 3 cut(s) 574, 778, 780
MwoI GCNNNNNNNGC 5 cut(s) 119, 859, 1030, 1100, 1209
NciI CCSGG 1 cut(s) 232
NdeII GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
NlaIII CATG 8 cut(s) 519, 658, 820, 842, 1165, 1263, 1303, 1353
NlaIV GGNNCC 3 cut(s) 664, 1279, 1425
NmeAIII GCCGAG 1 cut(s) 701
NmuCI GTSAC 3 cut(s) 694, 1334, 1354
NsiI ATGCAT 2 cut(s) 467, 1078
NspI RCATGY 1 cut(s) 658
PagI TCATGA 2 cut(s) 1161, 1299
PceI AGGCCT 2 cut(s) 206, 853
PciI ACATGT 1 cut(s) 654
PcsI WCGNNNNNNNCGW 1 cut(s) 990
PdmI GAANNNNTTC 1 cut(s) 365
PfeI GAWTC 9 cut(s) 350, 641, 911, 917, 923, 1145, 1158, 1303, 1341
PleI GAGTC 1 cut(s) 694
PpsI GAGTC 1 cut(s) 694
PscI ACATGT 1 cut(s) 654
Psp6I CCWGG 2 cut(s) 373, 1048
PspEI GGTNACC 1 cut(s) 1354
PspGI CCWGG 2 cut(s) 373, 1048
PspN4I GGNNCC 3 cut(s) 664, 1279, 1425
PsuI RGATCY 1 cut(s) 1423
RsaI GTAC 1 cut(s) 1226
RsaNI GTAC 1 cut(s) 1225
RseI CAYNNNNRTG 2 cut(s) 752, 1316
SalI GTCGAC 1 cut(s) 534
SaqAI TTAA 4 cut(s) 42, 303, 1442, 1447
Sau3AI GATC 9 cut(s) 97, 548, 625, 928, 974, 1308, 1363, 1423, 1437
SchI GAGTC 1 cut(s) 695
ScrFI CCNGG 3 cut(s) 232, 375, 1050
SduI GDGCHC 4 cut(s) 503, 665, 939, 1291
SfaNI GCATC 4 cut(s) 200, 474, 706, 1081
SfcI CTRYAG 1 cut(s) 726
SmiMI CAYNNNNRTG 2 cut(s) 752, 1316
SmlI CTYRAG 3 cut(s) 509, 737, 932
SmoI CTYRAG 3 cut(s) 509, 737, 932
SpeI ACTAGT 1 cut(s) 538
Sse9I AATT 4 cut(s) 365, 403, 1409, 1444
SseBI AGGCCT 2 cut(s) 206, 853
SsiI CCGC 5 cut(s) 441, 572, 599, 883, 969
SspI AATATT 1 cut(s) 382
SspMI CTAG 4 cut(s) 176, 539, 690, 1428
StuI AGGCCT 2 cut(s) 206, 853
StyD4I CCNGG 3 cut(s) 230, 373, 1048
StyI CCWWGG 1 cut(s) 1359
TaaI ACNGT 1 cut(s) 1169
TaqI TCGA 6 cut(s) 291, 535, 760, 993, 1082, 1344
TasI AATT 4 cut(s) 365, 403, 1409, 1444
TauI GCSGC 2 cut(s) 602, 971
TfiI GAWTC 9 cut(s) 350, 641, 911, 917, 923, 1145, 1158, 1303, 1341
Tru1I TTAA 4 cut(s) 42, 303, 1442, 1447
Tru9I TTAA 4 cut(s) 42, 303, 1442, 1447
TscAI CASTG 4 cut(s) 815, 864, 1174, 1425
TseFI GTSAC 3 cut(s) 694, 1334, 1354
Tsp45I GTSAC 3 cut(s) 694, 1334, 1354
TspDTI ATGAA 7 cut(s) 17, 277, 288, 661, 1178, 1288, 1316
TspGWI ACGGA 2 cut(s) 910, 1353
TspRI CASTG 4 cut(s) 815, 864, 1174, 1425
VneI GTGCAC 1 cut(s) 499
XceI RCATGY 1 cut(s) 658
XcmI CCANNNNNNNNNTGG 1 cut(s) 371
XmiI GTMKAC 1 cut(s) 535
XmnI GAANNNNTTC 1 cut(s) 365
XspI CTAG 4 cut(s) 176, 539, 690, 1428
Zsp2I ATGCAT 2 cut(s) 467, 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.