Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0008088

Physical Location & Seq

Genomic Coordinates Forward (+)

28607159 .. 28614139

Gene Structure 6981 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g40020.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGAACGACTCAGGAAACCCACAGGATGTGAATGTTCCACCAGTTGAAGGTGTTGCTGGAGGAGGGACAGCATATGGATGGACAGATGGTGGCTTTCAAGGTTCCAATCTACTAAAGGGATCAGTTGACCCTACAGAGGTTCCGACTGCAAATTTAGTGCATGTATGGTGCATGCCAAGCACAGCGAATGTTGGACCACAAGAAATGCCTAGACCTATGGAACCGGTTAATCTTCTGGCTGCTAGAAACGAGAGAGAAAGTACTCAAGTTGCATTACGTGCGAAAGCTTCCTGGGGTACTCCTGGAATTGCAGGGGTTGTGCAGGTTCAGTGTAATGATTTATGCTCCTCTGCTGGTGATCGGTTGATTGTTGGACAATCATTAAAGTTGCGTCGAGTGGTACCCATATTGGGTGTCCCAGATGCTCTTGTTCCCCTTGATCTTCCAGCTAGTCAAATAAACCTATTACCAGGAGAGACAACTGCAGTTTGGGTTTCCATTGATGTTCCTAGCGAGCAACCCCCAGGTCAGTATGAGGGGGAGATCATTATTACTGCAACAAAGGCAGATGCAGAGACTTCAGCACAATGCTTGGGCAAATCTGAGAAGCTTCAACTTTATAGGGAACTTCAAAGCTGTCTCGAAACTGTGGGCCCAATTGATGGGAAATCAGTGGATGAAGTGGTAGAAAGAGCGAAATCTGCATCTACATCTTTAAGAAGAGTTCTTCTATCTCCATTGTTTTCTGAATTCTTCTCAAATAATGGGTCAGTTGATATGATGGAGGAAGATGTTATTTCAAACCTTTCAGTTCGGGTGAAGATAAATGTGACAGTTTGGGACTTCATTCTTCCTGAAACTCCCTCACTTCCGGCTGTTTTTGGTATATCCGATACTGTAATTGAGGACCGTTTTGGTGTTAAACATGGGACTGAGGAGTGGTACGAGGCATTGGATCAGCATTTTAAATGGCTTCTTCAATATAGAATCAGTCCATATTTTTGCCGATGGGGTGATAGCATGCGCGTATTGACATATACCTGCCCTTGGCCAGCTGATCATCCAAAATCAGATGAATACTTTTCAGACCCACGATTAGCAGCTTATGCCTTGCCATATAGTCGAGCCGTCTCTGGTGGTGACGCAGCGAAGGAATACTCGCAGAAACAAATAGAGATATTGAAGACAAAGTCTCACTGGAAGAAAGCATATTTTTATTTGTGGGATGAGCCTTTGAATTTGGAGCAGTACGAATCCCTCCTCAACTTGGCCAAAGAGATCCATGCTTATGCTCCGGATGCTCGTGTCTTGACCACTTACTACTGTGGGCCAAGTGATGCGCCTCTTGCACCTACTCCTTTTGAGGCGTTTGTTAAAGTTCCCAAGTTTCTGCGCCCACATACTCAAATTTATTGTACTAGTGAATGGGTGCTTGGGAACCGAGAGGATTTGGTGGAGGATATTATTGCAGAGATACAACCTGAAAATGGCGAGGAGTGGTGGACTTACGTATGCATGGGACCATCTGATCCCCATCCCAACTGGCACCTTGGGATGCGAGGTACGCAACATCGAGCTGTAATGTGGCGTGTGTGGAAAGAAGGTGGAACAGGTTTCTTATACTGGGGTGCCAATTGCTATGAGAAGGCAACTGTTCCCAGTGCAGAGATAAGATTCAGGCGTGGTCTCCCCCCAGGAGATGGAGTTTTGTTCTATCCTGGTAAGGTGTTCTCATCATCAAATGAACCTGTTGCTTCAGTCAGACTAGAGCGCATCCTCAGTGGATTACAGGATATTGAATATCTCAGACTCTATGCTTCAAGATATGGTAGAGATGAAGGGCTTGCTCTCCTTGAGAAGACAGGTTTGTACTTGGGACCTGAGCGATACACACATGAGCATTTGCCCATTGATATAATGCGGGGTGAGATCTTCAACGCATGTCGGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4091

Protein Analysis

651

Amino Acids

72.49

Weight (kDa)

5.08

Isoelectric Point (pI)

44.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH123_cat	PF13320	409 - 544	4.4e-14	Glycoside hydrolase 123, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45150
fragaria_vesca	FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020
malus_domestica	MD08G1033200.v1.1 MD15G1029800.v1.1
prunus_persica	Prupe.1G381700_v2.0.a1 Prupe.1G381700_v2.0.a1
pyrus_communis	pycom08g02630 pycom15g02620
rosa_chinensis	RchiOBHm_Chr6g0300731
rosa_laevigata	RLG00000011307
rosa_multiflora	Rmu_sc0003626.1_g000005
rosa_roxburghii	Rroxscaffold_7G00167470
rosa_rugosa	Rorug06G0298800
rosa_samantha	Rh6AG411500 Rh6BG418700 Rh6CG426100 Rh6DG411600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	313, 1049
Acc65I	GGTACC	1 cut(s)	400
AccB1I	GGYRCC	3 cut(s)	400, 1545, 1628
AccB7I	CCANNNNNTGG	2 cut(s)	662, 1700
AccII	CGCG	1 cut(s)	1026
AccIII	TCCGGA	1 cut(s)	1294
AciI	CCGC	1 cut(s)	1921
AclWI	GGATC	4 cut(s)	127, 963, 1273, 1523
AcoI	YGGCCR	2 cut(s)	1049, 1269
AcsI	RAATTY	4 cut(s)	151, 749, 1237, 1407
AcuI	CTGAAG	2 cut(s)	564, 1740
AfaI	GTAC	8 cut(s)	262, 298, 402, 944, 1250, 1417, 1564, 1871
AfiI	CCNNNNNNNGG	8 cut(s)	47, 136, 410, 662, 1047, 1267, 1487, 1700
AgeI	ACCGGT	1 cut(s)	223
AhlI	ACTAGT	1 cut(s)	1418
AjnI	CCWGG	6 cut(s)	290, 301, 469, 523, 1693, 1717
AjuI	GAANNNNNNNTTGG	2 cut(s)	1416, 1448
AluBI	AGCT	7 cut(s)	287, 449, 610, 636, 1055, 1103, 1577
AluI	AGCT	7 cut(s)	287, 449, 610, 636, 1055, 1103, 1577
Alw26I	GTCTC	6 cut(s)	470, 569, 644, 1135, 1197, 1691
AlwI	GGATC	4 cut(s)	127, 963, 1273, 1523
Aor13HI	TCCGGA	1 cut(s)	1294
AoxI	GGCC	4 cut(s)	652, 1049, 1269, 1328
ApaI	GGGCCC	1 cut(s)	656
ApeKI	GCWGC	3 cut(s)	239, 1100, 1145
ApoI	RAATTY	4 cut(s)	151, 749, 1237, 1407
ArsI	GACNNNNNNTTYG	2 cut(s)	752, 784
AsiGI	ACCGGT	1 cut(s)	223
Asp718I	GGTACC	1 cut(s)	400
AspLEI	GCGC	4 cut(s)	1026, 1342, 1395, 1773
AspS9I	GGNCC	7 cut(s)	194, 652, 653, 907, 1328, 1520, 1877
AsuHPI	GGTGA	5 cut(s)	368, 829, 1025, 1151, 1937
AvaII	GGWCC	4 cut(s)	194, 907, 1520, 1877
BaeGI	GKGCMC	1 cut(s)	656
BalI	TGGCCA	2 cut(s)	1051, 1271
BanI	GGYRCC	3 cut(s)	400, 1545, 1628
BanII	GRGCYC	1 cut(s)	656
BauI	CACGAG	1 cut(s)	1302
BbsI	GAAGAC	2 cut(s)	1190, 1865
BbvI	GCAGC	3 cut(s)	226, 1112, 1157
BccI	CCATC	8 cut(s)	72, 80, 656, 775, 1002, 1531, 1542, 1694
BceAI	ACGGC	1 cut(s)	1112
BciT130I	CCWGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
BclI	TGATCA	1 cut(s)	1057
BcoDI	GTCTC	6 cut(s)	470, 569, 644, 1135, 1197, 1691
BcuI	ACTAGT	1 cut(s)	1418
BfaI	CTAG	6 cut(s)	210, 243, 450, 510, 1419, 1766
BfmI	CTRYAG	2 cut(s)	132, 483
BfuAI	ACCTGC	2 cut(s)	313, 1049
BglII	AGATCT	1 cut(s)	1929
BisI	GCNGC	3 cut(s)	240, 1101, 1146
BlsI	GCNGC	3 cut(s)	241, 1102, 1147
BmcAI	AGTACT	1 cut(s)	262
Bme1390I	CCNGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
Bme18I	GGWCC	4 cut(s)	194, 907, 1520, 1877
BmgT120I	GGNCC	7 cut(s)	194, 652, 653, 907, 1328, 1520, 1877
BmrFI	CCNGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
BmrI	ACTGGG	2 cut(s)	1633, 1653
BmsI	GCATC	7 cut(s)	412, 559, 713, 1288, 1327, 1545, 1782
BmuI	ACTGGG	2 cut(s)	1633, 1653
BpiI	GAAGAC	2 cut(s)	1190, 1865
BpmI	CTGGAG	1 cut(s)	78
Bpu10I	CCTNAGC	1 cut(s)	1881
BpuEI	CTTGAG	2 cut(s)	249, 1874
BsaAI	YACGTR	2 cut(s)	278, 1510
BsaBI	GATNNNNATC	1 cut(s)	1533
BsaI	GGTCTC	1 cut(s)	1691
BsaJI	CCNNGG	5 cut(s)	291, 523, 1046, 1549, 1693
BsaWI	WCCGGW	2 cut(s)	223, 1294
BsaXI	ACNNNNNCTCC	2 cut(s)	1689, 1719
Bsc4I	CCNNNNNNNGG	8 cut(s)	47, 136, 410, 662, 1047, 1267, 1487, 1700
Bse118I	RCCGGY	1 cut(s)	223
Bse1I	ACTGG	5 cut(s)	41, 1202, 1547, 1628, 1659
Bse8I	GATNNNNATC	1 cut(s)	1533
BseAI	TCCGGA	1 cut(s)	1294
BseBI	CCWGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
BseDI	CCNNGG	5 cut(s)	291, 523, 1046, 1549, 1693
BseGI	GGATG	9 cut(s)	31, 83, 682, 1060, 1231, 1303, 1534, 1560, 1773
BseJI	GATNNNNATC	1 cut(s)	1533
BseLI	CCNNNNNNNGG	8 cut(s)	47, 136, 410, 662, 1047, 1267, 1487, 1700
BseMII	CTCAG	6 cut(s)	24, 594, 924, 1792, 1819, 1872
BseNI	ACTGG	5 cut(s)	41, 1202, 1547, 1628, 1659
BseRI	GAGGAG	5 cut(s)	75, 337, 950, 1250, 1508
BseSI	GKGCMC	1 cut(s)	656
BseXI	GCAGC	3 cut(s)	226, 1112, 1157
BsgI	GTGCAG	2 cut(s)	341, 1683
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	4 cut(s)	654, 1051, 1271, 1330
BshNI	GGYRCC	3 cut(s)	400, 1545, 1628
BshTI	ACCGGT	1 cut(s)	223
BsiSI	CCGG	3 cut(s)	224, 872, 1295
BslFI	GGGAC	6 cut(s)	79, 401, 854, 943, 1533, 1890
BslI	CCNNNNNNNGG	8 cut(s)	47, 136, 410, 662, 1047, 1267, 1487, 1700
BsmAI	GTCTC	6 cut(s)	470, 569, 644, 1135, 1197, 1691
BsmBI	CGTCTC	1 cut(s)	1135
BsmFI	GGGAC	6 cut(s)	79, 401, 854, 943, 1533, 1890
BsnI	GGCC	4 cut(s)	654, 1051, 1271, 1330
Bso31I	GGTCTC	1 cut(s)	1691
Bsp120I	GGGCCC	1 cut(s)	652
Bsp1286I	GDGCHC	1 cut(s)	656
Bsp13I	TCCGGA	1 cut(s)	1294
Bsp143I	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
BspACI	CCGC	1 cut(s)	1921
BspANI	GGCC	4 cut(s)	654, 1051, 1271, 1330
BspCNI	CTCAG	6 cut(s)	23, 595, 925, 1791, 1818, 1873
BspEI	TCCGGA	1 cut(s)	1294
BspFNI	CGCG	1 cut(s)	1026
BspMAI	CTGCAG	1 cut(s)	487
BspMI	ACCTGC	2 cut(s)	313, 1049
BspPI	GGATC	4 cut(s)	127, 963, 1273, 1523
BspT107I	GGYRCC	3 cut(s)	400, 1545, 1628
BspTNI	GGTCTC	1 cut(s)	1691
BsrFI	RCCGGY	1 cut(s)	223
BsrI	ACTGG	5 cut(s)	41, 1202, 1547, 1628, 1659
BssAI	RCCGGY	1 cut(s)	223
BssECI	CCNNGG	5 cut(s)	291, 523, 1046, 1549, 1693
BssMI	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
BssSI	CACGAG	1 cut(s)	1302
BssT1I	CCWWGG	2 cut(s)	1046, 1549
Bst2BI	CACGAG	1 cut(s)	1302
Bst2UI	CCWGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
Bst4CI	ACNGT	6 cut(s)	649, 835, 898, 911, 1325, 1654
Bst6I	CTCTTC	1 cut(s)	715
BstAPI	GCANNNNNTGC	2 cut(s)	278, 1106
BstBAI	YACGTR	2 cut(s)	278, 1510
BstC8I	GCNNGC	5 cut(s)	173, 515, 1022, 1053, 1845
BstDEI	CTNAG	6 cut(s)	10, 603, 933, 1778, 1805, 1881
BstF5I	GGATG	9 cut(s)	31, 83, 682, 1060, 1231, 1303, 1534, 1560, 1773
BstFNI	CGCG	1 cut(s)	1026
BstHHI	GCGC	4 cut(s)	1026, 1342, 1395, 1773
BstKTI	GATC	9 cut(s)	122, 361, 442, 546, 958, 1060, 1281, 1531, 1932
BstMAI	GTCTC	6 cut(s)	470, 569, 644, 1135, 1197, 1691
BstMBI	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
BstMWI	GCNNNNNNNGC	8 cut(s)	177, 278, 563, 701, 1106, 1298, 1346, 1564
BstNI	CCWGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
BstNSI	RCATGY	4 cut(s)	164, 175, 1024, 1944
BstSCI	CCNGG	6 cut(s)	290, 301, 469, 523, 1693, 1717
BstSFI	CTRYAG	2 cut(s)	132, 483
BstSLI	GKGCMC	1 cut(s)	656
BstSNI	TACGTA	1 cut(s)	1510
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	3 cut(s)	226, 1112, 1157
BstV2I	GAAGAC	2 cut(s)	1190, 1865
BstX2I	RGATCY	2 cut(s)	1278, 1929
BstYI	RGATCY	2 cut(s)	1278, 1929
BsuRI	GGCC	4 cut(s)	654, 1051, 1271, 1330
BtsCI	GGATG	9 cut(s)	31, 83, 682, 1060, 1231, 1303, 1534, 1560, 1773
BtsIMutI	CAGTG	5 cut(s)	335, 678, 1195, 1666, 1786
BveI	ACCTGC	2 cut(s)	313, 1049
Cac8I	GCNNGC	5 cut(s)	173, 515, 1022, 1053, 1845
CfoI	GCGC	4 cut(s)	1026, 1342, 1395, 1773
Cfr10I	RCCGGY	1 cut(s)	223
Cfr13I	GGNCC	7 cut(s)	194, 652, 653, 907, 1328, 1520, 1877
CseI	GACGC	2 cut(s)	380, 1151
Csp6I	GTAC	8 cut(s)	261, 297, 401, 943, 1249, 1416, 1563, 1870
CspAI	ACCGGT	1 cut(s)	223
CviAII	CATG	8 cut(s)	161, 172, 926, 1021, 1283, 1516, 1895, 1941
CviQI	GTAC	8 cut(s)	261, 297, 401, 943, 1249, 1416, 1563, 1870
DdeI	CTNAG	6 cut(s)	10, 603, 933, 1778, 1805, 1881
DpnI	GATC	9 cut(s)	121, 360, 441, 545, 957, 1059, 1280, 1530, 1931
DpnII	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
DraI	TTTAAA	1 cut(s)	967
EaeI	YGGCCR	2 cut(s)	1049, 1269
Eam1104I	CTCTTC	1 cut(s)	715
EarI	CTCTTC	1 cut(s)	715
Eco105I	TACGTA	1 cut(s)	1510
Eco130I	CCWWGG	2 cut(s)	1046, 1549
Eco24I	GRGCYC	1 cut(s)	656
Eco31I	GGTCTC	1 cut(s)	1691
Eco47I	GGWCC	4 cut(s)	194, 907, 1520, 1877
Eco57I	CTGAAG	2 cut(s)	564, 1740
EcoO109I	RGGNCCY	1 cut(s)	1877
EcoRI	GAATTC	1 cut(s)	749
EcoRII	CCWGG	6 cut(s)	290, 301, 469, 523, 1693, 1717
EcoT14I	CCWWGG	2 cut(s)	1046, 1549
EcoT22I	ATGCAT	1 cut(s)	1517
EcoT38I	GRGCYC	1 cut(s)	656
ErhI	CCWWGG	2 cut(s)	1046, 1549
Esp3I	CGTCTC	1 cut(s)	1135
FaeI	CATG	8 cut(s)	164, 175, 929, 1024, 1286, 1519, 1898, 1944
FaqI	GGGAC	6 cut(s)	79, 401, 854, 943, 1533, 1890
FatI	CATG	8 cut(s)	160, 171, 925, 1020, 1282, 1515, 1894, 1940
FauI	CCCGC	1 cut(s)	1914
FauNDI	CATATG	1 cut(s)	73
FbaI	TGATCA	1 cut(s)	1057
Fnu4HI	GCNGC	3 cut(s)	240, 1101, 1146
FokI	GGATG	9 cut(s)	38, 90, 689, 1047, 1238, 1310, 1521, 1567, 1760
FriOI	GRGCYC	1 cut(s)	656
Fsp4HI	GCNGC	3 cut(s)	240, 1101, 1146
FspBI	CTAG	6 cut(s)	210, 243, 450, 510, 1419, 1766
GlaI	GCGC	4 cut(s)	1025, 1341, 1394, 1772
GluI	GCNGC	3 cut(s)	240, 1101, 1146
GsuI	CTGGAG	1 cut(s)	78
HaeIII	GGCC	4 cut(s)	654, 1051, 1271, 1330
HapII	CCGG	3 cut(s)	224, 872, 1295
HgaI	GACGC	2 cut(s)	380, 1151
HhaI	GCGC	4 cut(s)	1026, 1342, 1395, 1773
Hin1II	CATG	8 cut(s)	164, 175, 929, 1024, 1286, 1519, 1898, 1944
Hin6I	GCGC	4 cut(s)	1024, 1340, 1393, 1771
HinP1I	GCGC	4 cut(s)	1024, 1340, 1393, 1771
HincII	GTYRAC	1 cut(s)	127
HindII	GTYRAC	1 cut(s)	127
HindIII	AAGCTT	2 cut(s)	285, 608
HinfI	GANTC	5 cut(s)	8, 987, 1253, 1674, 1809
HpaII	CCGG	3 cut(s)	224, 872, 1295
HphI	GGTGA	5 cut(s)	368, 829, 1025, 1151, 1937
Hpy166II	GTNNAC	2 cut(s)	127, 1503
Hpy188I	TCNGA	9 cut(s)	144, 604, 748, 892, 1072, 1087, 1528, 1763, 1808
Hpy188III	TCNNGA	7 cut(s)	12, 641, 854, 1295, 1309, 1821, 1950
Hpy8I	GTNNAC	2 cut(s)	127, 1503
Hpy99I	CGWCG	1 cut(s)	396
HpyAV	CCTTC	5 cut(s)	41, 1144, 1595, 1639, 1832
HpyCH4III	ACNGT	6 cut(s)	649, 835, 898, 911, 1325, 1654
HpyCH4IV	ACGT	2 cut(s)	277, 1509
HpyF10VI	GCNNNNNNNGC	8 cut(s)	177, 278, 563, 701, 1106, 1298, 1346, 1564
HpyF3I	CTNAG	6 cut(s)	10, 603, 933, 1778, 1805, 1881
HpySE526I	ACGT	2 cut(s)	277, 1509
Hsp92II	CATG	8 cut(s)	164, 175, 929, 1024, 1286, 1519, 1898, 1944
HspAI	GCGC	4 cut(s)	1024, 1340, 1393, 1771
Kpn2I	TCCGGA	1 cut(s)	1294
KpnI	GGTACC	1 cut(s)	404
Ksp22I	TGATCA	1 cut(s)	1057
Kzo9I	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
LmnI	GCTCC	3 cut(s)	350, 1243, 1297
Lsp1109I	GCAGC	3 cut(s)	226, 1112, 1157
LweI	GCATC	7 cut(s)	412, 559, 713, 1288, 1327, 1545, 1782
MaeI	CTAG	6 cut(s)	210, 243, 450, 510, 1419, 1766
MaeII	ACGT	2 cut(s)	277, 1509
MaeIII	GTNAC	2 cut(s)	829, 1139
MalI	GATC	9 cut(s)	121, 360, 441, 545, 957, 1059, 1280, 1530, 1931
MboI	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
MfeI	CAATTG	2 cut(s)	657, 1633
MflI	RGATCY	2 cut(s)	1278, 1929
MhlI	GDGCHC	1 cut(s)	656
MlsI	TGGCCA	2 cut(s)	1051, 1271
MluCI	AATT	8 cut(s)	151, 306, 657, 749, 900, 1237, 1407, 1633
MluNI	TGGCCA	2 cut(s)	1051, 1271
MlyI	GAGTC	2 cut(s)	2, 1803
MmeI	TCCRAC	3 cut(s)	167, 172, 352
Mox20I	TGGCCA	2 cut(s)	1051, 1271
Mph1103I	ATGCAT	1 cut(s)	1517
MroI	TCCGGA	1 cut(s)	1294
MscI	TGGCCA	2 cut(s)	1051, 1271
MseI	TTAA	6 cut(s)	228, 383, 716, 921, 966, 1374
MslI	CAYNNNNRTG	2 cut(s)	76, 1287
Msp20I	TGGCCA	2 cut(s)	1051, 1271
MspA1I	CMGCKG	1 cut(s)	1055
MspI	CCGG	3 cut(s)	224, 872, 1295
MspR9I	CCNGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
MunI	CAATTG	2 cut(s)	657, 1633
MvaI	CCWGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
MvnI	CGCG	1 cut(s)	1026
MwoI	GCNNNNNNNGC	8 cut(s)	177, 278, 563, 701, 1106, 1298, 1346, 1564
NdeI	CATATG	1 cut(s)	73
NdeII	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
NlaIII	CATG	8 cut(s)	164, 175, 929, 1024, 1286, 1519, 1898, 1944
NmuCI	GTSAC	2 cut(s)	829, 1139
NsiI	ATGCAT	1 cut(s)	1517
NspI	RCATGY	4 cut(s)	164, 175, 1024, 1944
PaeI	GCATGC	2 cut(s)	175, 1024
PfeI	GAWTC	3 cut(s)	987, 1253, 1674
PflFI	GACNNNGTC	1 cut(s)	1189
PflMI	CCANNNNNTGG	2 cut(s)	662, 1700
PfoI	TCCNGGA	1 cut(s)	301
PinAI	ACCGGT	1 cut(s)	223
PkrI	GCNGC	3 cut(s)	241, 1102, 1147
PleI	GAGTC	2 cut(s)	2, 1803
PpsI	GAGTC	2 cut(s)	2, 1803
Ppu21I	YACGTR	2 cut(s)	278, 1510
PpuMI	RGGWCCY	1 cut(s)	1877
Psp5II	RGGWCCY	1 cut(s)	1877
Psp6I	CCWGG	6 cut(s)	290, 301, 469, 523, 1693, 1717
PspGI	CCWGG	6 cut(s)	290, 301, 469, 523, 1693, 1717
PspOMI	GGGCCC	1 cut(s)	652
PspPI	GGNCC	7 cut(s)	194, 652, 653, 907, 1328, 1520, 1877
PspPPI	RGGWCCY	1 cut(s)	1877
PstI	CTGCAG	1 cut(s)	487
PsuI	RGATCY	2 cut(s)	1278, 1929
PsyI	GACNNNGTC	1 cut(s)	1189
PvuII	CAGCTG	1 cut(s)	1055
RsaI	GTAC	8 cut(s)	262, 298, 402, 944, 1250, 1417, 1564, 1871
RsaNI	GTAC	8 cut(s)	261, 297, 401, 943, 1249, 1416, 1563, 1870
RseI	CAYNNNNRTG	2 cut(s)	76, 1287
SaqAI	TTAA	6 cut(s)	228, 383, 716, 921, 966, 1374
SatI	GCNGC	3 cut(s)	240, 1101, 1146
Sau3AI	GATC	9 cut(s)	119, 358, 439, 543, 955, 1057, 1278, 1528, 1929
Sau96I	GGNCC	7 cut(s)	194, 652, 653, 907, 1328, 1520, 1877
ScaI	AGTACT	1 cut(s)	262
SchI	GAGTC	2 cut(s)	2, 1803
ScrFI	CCNGG	6 cut(s)	292, 303, 471, 525, 1695, 1719
SduI	GDGCHC	1 cut(s)	656
SfaNI	GCATC	7 cut(s)	412, 559, 713, 1288, 1327, 1545, 1782
SfcI	CTRYAG	2 cut(s)	132, 483
SinI	GGWCC	4 cut(s)	194, 907, 1520, 1877
SmiMI	CAYNNNNRTG	2 cut(s)	76, 1287
SmlI	CTYRAG	2 cut(s)	264, 1853
SmoI	CTYRAG	2 cut(s)	264, 1853
SnaBI	TACGTA	1 cut(s)	1510
SpeI	ACTAGT	1 cut(s)	1418
SphI	GCATGC	2 cut(s)	175, 1024
Sse9I	AATT	8 cut(s)	151, 306, 657, 749, 900, 1237, 1407, 1633
SsiI	CCGC	1 cut(s)	1921
SspMI	CTAG	6 cut(s)	210, 243, 450, 510, 1419, 1766
StyD4I	CCNGG	6 cut(s)	290, 301, 469, 523, 1693, 1717
StyI	CCWWGG	2 cut(s)	1046, 1549
TaaI	ACNGT	6 cut(s)	649, 835, 898, 911, 1325, 1654
TaiI	ACGT	2 cut(s)	280, 1512
TaqI	TCGA	4 cut(s)	394, 642, 1123, 1573
TaqII	GACCGA	1 cut(s)	1935
TasI	AATT	8 cut(s)	151, 306, 657, 749, 900, 1237, 1407, 1633
TatI	WGTACW	3 cut(s)	260, 1415, 1869
TfiI	GAWTC	3 cut(s)	987, 1253, 1674
Tru1I	TTAA	6 cut(s)	228, 383, 716, 921, 966, 1374
Tru9I	TTAA	6 cut(s)	228, 383, 716, 921, 966, 1374
TscAI	CASTG	5 cut(s)	335, 678, 1202, 1666, 1786
TseFI	GTSAC	2 cut(s)	829, 1139
TseI	GCWGC	3 cut(s)	239, 1100, 1145
Tsp45I	GTSAC	2 cut(s)	829, 1139
TspDTI	ATGAA	6 cut(s)	17, 693, 835, 1089, 1758, 1851
TspRI	CASTG	5 cut(s)	335, 678, 1202, 1666, 1786
Tth111I	GACNNNGTC	1 cut(s)	1189
Van91I	CCANNNNNTGG	2 cut(s)	662, 1700
VpaK11BI	GGWCC	4 cut(s)	194, 907, 1520, 1877
XapI	RAATTY	4 cut(s)	151, 749, 1237, 1407
XceI	RCATGY	4 cut(s)	164, 175, 1024, 1944
XspI	CTAG	6 cut(s)	210, 243, 450, 510, 1419, 1766
ZrmI	AGTACT	1 cut(s)	262
Zsp2I	ATGCAT	1 cut(s)	1517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.