Rroxscaffold_7G00167470

Domain of unknown function (DUF4091)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0008088
Physical Location & Seq
Forward (+)
8594194 .. 8600680
6487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00167470.1

Sequence Viewer

Length: 1953 bp
ATGAACGACTCAGGAAACCCACAGGATGCCGATGTTCCACCAGTTGAAGGTGTTGCTGGAGGAGGGACAGCGTATGGATGGACTGATGGTGGCTTTCAAGGTTCCAATCCACTCAAGGGATCAGTTGACCCTACAGAGGTTCTGACCGCAGATTTAGTGCATGTATGGTCCATGCCAAGCACAGCGAATGTTGGACCACAAGAAATGCCTAGACCTATGGATCCTGTTAATCTTCTGGCTGCTAGAAACGAGAGAGAAAGTATTCAAGTTGCAATACGTGCGAAAGCTTCCTGGGGTGGTCCTGGAATTGCCGGGGTTGTGCAGGTTCAGTGTAATGATTTATGCTCCTCAGCTGGTGATCGGTTGGTTGTTGGACGATCATTAAAGTTGCGTCGTGTGGTGCCCATATTGGGTGTCCCAGATGCTCTTGTTCCCCTTGATCTTCCTGTTAGTCAAATAAACCTATTACCAGGAGAGACAACTGCAGTTTGGGTTTCCATTGATGTTCCTAGTGAGCAACCCCCAGGTCAGTATGAGGGGGAGATCATTATTACTGCAACAAAGGCAGATGCAGAGACTTCAGCACAATGCTTGGGAAAATCCGAGAAGCCTCAACTTTATAGGGAACTTCAAAGATGTCTCGAAACTGTGGAACCAATTGATGGGAAACCAGTGAATGAAGTGGTAGAAAGAGCAAAATCTGCAGCTGCATCTTTAAGAAGAGTTCTTCTGTCTCCATTGTTTTCTGAGTTCTTTTCAAATAATGGGTCAGTTGATATGATGGAGGAAGATGCTATTTCAAACCTTTCAGTACGGGTGAAGATAAATGTGACTGTTTGGGACTTCATTCTTCCTGAAACTCCCTCACTTCCAGCTGTATTTGGTATATCCGATACTGTAATTGAGGATCGTTTTGGTGTTGAACATGGGACTGAGGAGTGGTATGAGGCATTGGATCAGCATTTTAAGTGGCTTCTTCAATATAGAATCAGTCCATATTTTTGCCGATGGGGTGATAGCATGCGTGTATTGACGTATACCTGCCCTTGGCCAGCTGATCATCCAAAATCAGATGAATATTTTTCAGACCCACGATTAGCAGCCTATGCCTTGCCATATAGTCGATCTGTCTCTGGTGGTGACGCAGCGAAGGAGTACTCGCAGAAACAAATTGAGATATTGAGGACAAAGTCTCACTGGAAGAAAGCATATTTTTATTTGTGGGATGAGCCTTTAAATTTGGAGCAATATGAGTCCCTCCTCAACTTGGCCAAAGAGATCCATGCTTATGCTCCGGATGCTCGTGTCTTAACTACTTACTACTGTGGGCCAAGTGATGCCCCTCTTGCACCTACTCCTTTTGAGGCTTTTGTTAAAGTTCCTAAGTTTCTGCGCCCACATACTCAAATTTACTGTACAAGTGAATGGGTGCTTGGGAATCGAGAGGATTTGGTGAAGGATATTATTGCAGAAATGCAACCTGAAAATGGCGAGGAATGGTGGACTTACGTGTGCATGGGACCATCTGACCCCCATCCCAACTGGCACCTTGGGATGCGAGGTACGCAACATCGAGCTGTAATGTGGCGTGTATGGAAAGAAGGTGGAACAGGTTTCTTATACTGGGGTGCCAATTGCTATGAGAAGGCAACTGTTCCCAGTGCAGAGGTAAATTTGCTTGGCATCGGGATGTTCAATGATGGAGTTTTGTTTTACCCTGGTAAGGTGTTCTCATCATCAAATGAACCAGTTGCTTCAGTCAGACTAGAGCGCATTCTCAGTGGATTACAGGACATTGAATATCTCTCACTCTATGCTTCGAGATATGGTAGAGATGAAGGGCTTGCTCTCCTTGAGAAGACAGGTTTGTACTTGGGTCCTGAGCGTTACACGCATGAGCATATGCCTGTTGATGTAATGCGGGGCGAGATCTTCAATGCATGTCGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4091

Protein Analysis

650

Amino Acids

72.39

Weight (kDa)

4.95

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GH123_cat PF13320 486 - 603 4.2e-10 Glycoside hydrolase 123, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 313, 1049
AccB1I GGYRCC 3 cut(s) 400, 1545, 1628
AccB7I CCANNNNNTGG 1 cut(s) 662
AccI GTMKAC 1 cut(s) 1037
AccIII TCCGGA 1 cut(s) 1294
AciI CCGC 2 cut(s) 147, 1921
AclWI GGATC 6 cut(s) 127, 215, 228, 915, 963, 1273
AcoI YGGCCR 2 cut(s) 1049, 1269
AcsI RAATTY 3 cut(s) 1237, 1407, 1672
AcuI CTGAAG 2 cut(s) 564, 1740
AfaI GTAC 5 cut(s) 813, 1157, 1417, 1564, 1871
AfiI CCNNNNNNNGG 9 cut(s) 47, 116, 136, 410, 662, 1047, 1267, 1487, 1723
AflIII ACRYGT 1 cut(s) 1509
AjnI CCWGG 5 cut(s) 290, 301, 469, 523, 1717
AjuI GAANNNNNNNTTGG 2 cut(s) 1416, 1448
AluBI AGCT 6 cut(s) 287, 353, 707, 875, 1055, 1577
AluI AGCT 6 cut(s) 287, 353, 707, 875, 1055, 1577
Alw26I GTCTC 6 cut(s) 470, 569, 644, 738, 1135, 1197
AlwI GGATC 6 cut(s) 127, 215, 228, 915, 963, 1273
Aor13HI TCCGGA 1 cut(s) 1294
AoxI GGCC 3 cut(s) 1049, 1269, 1328
ApeKI GCWGC 5 cut(s) 239, 704, 707, 1100, 1145
ApoI RAATTY 3 cut(s) 1237, 1407, 1672
ArsI GACNNNNNNTTYG 2 cut(s) 752, 784
Asp700I GAANNNNTTC 1 cut(s) 261
AspLEI GCGC 2 cut(s) 1395, 1773
AspS9I GGNCC 6 cut(s) 168, 194, 299, 1328, 1520, 1877
AsuC2I CCSGG 1 cut(s) 313
AsuHPI GGTGA 5 cut(s) 368, 829, 1025, 1151, 1465
AvaII GGWCC 5 cut(s) 168, 194, 299, 1520, 1877
BaeGI GKGCMC 1 cut(s) 405
BalI TGGCCA 2 cut(s) 1051, 1271
BamHI GGATCC 1 cut(s) 220
BanI GGYRCC 3 cut(s) 400, 1545, 1628
BauI CACGAG 1 cut(s) 1302
BbsI GAAGAC 1 cut(s) 1865
BbvCI CCTCAGC 1 cut(s) 349
BbvI GCAGC 5 cut(s) 226, 694, 716, 1112, 1157
BccI CCATC 8 cut(s) 72, 80, 656, 775, 1002, 1531, 1542, 1694
BciT130I CCWGG 5 cut(s) 292, 303, 471, 525, 1719
BclI TGATCA 1 cut(s) 1057
BcnI CCSGG 1 cut(s) 313
BcoDI GTCTC 6 cut(s) 470, 569, 644, 738, 1135, 1197
BfaI CTAG 4 cut(s) 210, 243, 510, 1766
BfmI CTRYAG 3 cut(s) 132, 483, 702
BfuAI ACCTGC 2 cut(s) 313, 1049
BglII AGATCT 1 cut(s) 1929
BisI GCNGC 5 cut(s) 240, 705, 708, 1101, 1146
BlsI GCNGC 5 cut(s) 241, 706, 709, 1102, 1147
BmcAI AGTACT 1 cut(s) 1157
Bme1390I CCNGG 6 cut(s) 292, 303, 313, 471, 525, 1719
Bme18I GGWCC 5 cut(s) 168, 194, 299, 1520, 1877
BmgT120I GGNCC 6 cut(s) 168, 194, 299, 1328, 1520, 1877
BmiI GGNNCC 8 cut(s) 103, 222, 402, 654, 1521, 1547, 1630, 1878
BmrFI CCNGG 6 cut(s) 292, 303, 313, 471, 525, 1719
BmrI ACTGGG 2 cut(s) 1633, 1653
BmsI GCATC 9 cut(s) 16, 412, 559, 719, 781, 1288, 1327, 1545, 1692
BmuI ACTGGG 2 cut(s) 1633, 1653
BpiI GAAGAC 1 cut(s) 1865
BpmI CTGGAG 1 cut(s) 78
Bpu10I CCTNAGC 2 cut(s) 349, 1881
BpuEI CTTGAG 2 cut(s) 98, 1874
BpuMI CCSGG 1 cut(s) 313
BsaAI YACGTR 2 cut(s) 278, 1510
BsaJI CCNNGG 6 cut(s) 291, 312, 523, 1046, 1549, 1717
BsaWI WCCGGW 1 cut(s) 1294
Bsc4I CCNNNNNNNGG 9 cut(s) 47, 116, 136, 410, 662, 1047, 1267, 1487, 1723
Bse1I ACTGG 7 cut(s) 41, 671, 1202, 1547, 1628, 1659, 1748
BseAI TCCGGA 1 cut(s) 1294
BseBI CCWGG 5 cut(s) 292, 303, 471, 525, 1719
BseDI CCNNGG 6 cut(s) 291, 312, 523, 1046, 1549, 1717
BseGI GGATG 8 cut(s) 31, 83, 1060, 1231, 1303, 1534, 1560, 1695
BseLI CCNNNNNNNGG 9 cut(s) 47, 116, 136, 410, 662, 1047, 1267, 1487, 1723
BseMII CTCAG 6 cut(s) 24, 363, 738, 924, 1792, 1872
BseNI ACTGG 7 cut(s) 41, 671, 1202, 1547, 1628, 1659, 1748
BseRI GAGGAG 4 cut(s) 75, 337, 950, 1250
BseSI GKGCMC 1 cut(s) 405
BseXI GCAGC 5 cut(s) 226, 694, 716, 1112, 1157
BsgI GTGCAG 2 cut(s) 341, 1683
BshFI GGCC 3 cut(s) 1051, 1271, 1330
BshNI GGYRCC 3 cut(s) 400, 1545, 1628
BsiSI CCGG 2 cut(s) 312, 1295
BslFI GGGAC 6 cut(s) 79, 401, 854, 943, 1240, 1533
BslI CCNNNNNNNGG 9 cut(s) 47, 116, 136, 410, 662, 1047, 1267, 1487, 1723
BsmAI GTCTC 6 cut(s) 470, 569, 644, 738, 1135, 1197
BsmFI GGGAC 6 cut(s) 79, 401, 854, 943, 1240, 1533
BsmI GAATGC 1 cut(s) 1773
BsnI GGCC 3 cut(s) 1051, 1271, 1330
Bsp1286I GDGCHC 1 cut(s) 405
Bsp13I TCCGGA 1 cut(s) 1294
Bsp1407I TGTACA 1 cut(s) 1415
BspACI CCGC 2 cut(s) 147, 1921
BspANI GGCC 3 cut(s) 1051, 1271, 1330
BspCNI CTCAG 6 cut(s) 23, 362, 739, 925, 1791, 1873
BspEI TCCGGA 1 cut(s) 1294
BspLI GGNNCC 8 cut(s) 103, 222, 402, 654, 1521, 1547, 1630, 1878
BspMAI CTGCAG 2 cut(s) 487, 706
BspMI ACCTGC 2 cut(s) 313, 1049
BspPI GGATC 6 cut(s) 127, 215, 228, 915, 963, 1273
BspT107I GGYRCC 3 cut(s) 400, 1545, 1628
BsrGI TGTACA 1 cut(s) 1415
BsrI ACTGG 7 cut(s) 41, 671, 1202, 1547, 1628, 1659, 1748
BssECI CCNNGG 6 cut(s) 291, 312, 523, 1046, 1549, 1717
BssNAI GTATAC 1 cut(s) 1038
BssSI CACGAG 1 cut(s) 1302
BssT1I CCWWGG 2 cut(s) 1046, 1549
Bst1107I GTATAC 1 cut(s) 1038
Bst2BI CACGAG 1 cut(s) 1302
Bst2UI CCWGG 5 cut(s) 292, 303, 471, 525, 1719
Bst4CI ACNGT 6 cut(s) 649, 835, 898, 1325, 1415, 1654
Bst6I CTCTTC 1 cut(s) 715
BstAPI GCANNNNNTGC 3 cut(s) 278, 701, 1106
BstAUI TGTACA 1 cut(s) 1415
BstBAI YACGTR 2 cut(s) 278, 1510
BstC8I GCNNGC 3 cut(s) 1022, 1053, 1845
BstDEI CTNAG 7 cut(s) 10, 349, 747, 933, 1383, 1778, 1881
BstF5I GGATG 8 cut(s) 31, 83, 1060, 1231, 1303, 1534, 1560, 1695
BstHHI GCGC 2 cut(s) 1395, 1773
BstMAI GTCTC 6 cut(s) 470, 569, 644, 738, 1135, 1197
BstMWI GCNNNNNNNGC 8 cut(s) 278, 563, 701, 1106, 1298, 1346, 1564, 1891
BstNI CCWGG 5 cut(s) 292, 303, 471, 525, 1719
BstNSI RCATGY 3 cut(s) 164, 1024, 1944
BstSCI CCNGG 6 cut(s) 290, 301, 311, 469, 523, 1717
BstSFI CTRYAG 3 cut(s) 132, 483, 702
BstSLI GKGCMC 1 cut(s) 405
BstV1I GCAGC 5 cut(s) 226, 694, 716, 1112, 1157
BstV2I GAAGAC 1 cut(s) 1865
BstX2I RGATCY 3 cut(s) 220, 1278, 1929
BstYI RGATCY 3 cut(s) 220, 1278, 1929
BstZ17I GTATAC 1 cut(s) 1038
BsuRI GGCC 3 cut(s) 1051, 1271, 1330
BtsCI GGATG 8 cut(s) 31, 83, 1060, 1231, 1303, 1534, 1560, 1695
BtsIMutI CAGTG 5 cut(s) 335, 678, 1195, 1666, 1786
BveI ACCTGC 2 cut(s) 313, 1049
Cac8I GCNNGC 3 cut(s) 1022, 1053, 1845
CfoI GCGC 2 cut(s) 1395, 1773
Cfr13I GGNCC 6 cut(s) 168, 194, 299, 1328, 1520, 1877
CseI GACGC 2 cut(s) 380, 1151
Csp6I GTAC 5 cut(s) 812, 1156, 1416, 1563, 1870
CviAII CATG 8 cut(s) 161, 172, 926, 1021, 1283, 1516, 1895, 1941
CviQI GTAC 5 cut(s) 812, 1156, 1416, 1563, 1870
DdeI CTNAG 7 cut(s) 10, 349, 747, 933, 1383, 1778, 1881
DraI TTTAAA 1 cut(s) 1236
EaeI YGGCCR 2 cut(s) 1049, 1269
Eam1104I CTCTTC 1 cut(s) 715
EarI CTCTTC 1 cut(s) 715
Eco130I CCWWGG 2 cut(s) 1046, 1549
Eco47I GGWCC 5 cut(s) 168, 194, 299, 1520, 1877
Eco57I CTGAAG 2 cut(s) 564, 1740
EcoO109I RGGNCCY 1 cut(s) 1877
EcoRII CCWGG 5 cut(s) 290, 301, 469, 523, 1717
EcoT14I CCWWGG 2 cut(s) 1046, 1549
EcoT22I ATGCAT 1 cut(s) 1942
ErhI CCWWGG 2 cut(s) 1046, 1549
FaeI CATG 8 cut(s) 164, 175, 929, 1024, 1286, 1519, 1898, 1944
FaqI GGGAC 6 cut(s) 79, 401, 854, 943, 1240, 1533
FatI CATG 8 cut(s) 160, 171, 925, 1020, 1282, 1515, 1894, 1940
FauI CCCGC 1 cut(s) 1914
FauNDI CATATG 1 cut(s) 1902
FbaI TGATCA 1 cut(s) 1057
FblI GTMKAC 1 cut(s) 1037
Fnu4HI GCNGC 5 cut(s) 240, 705, 708, 1101, 1146
FokI GGATG 8 cut(s) 38, 90, 1047, 1238, 1310, 1521, 1567, 1702
Fsp4HI GCNGC 5 cut(s) 240, 705, 708, 1101, 1146
FspBI CTAG 4 cut(s) 210, 243, 510, 1766
GlaI GCGC 2 cut(s) 1394, 1772
GluI GCNGC 5 cut(s) 240, 705, 708, 1101, 1146
GsuI CTGGAG 1 cut(s) 78
HaeIII GGCC 3 cut(s) 1051, 1271, 1330
HapII CCGG 2 cut(s) 312, 1295
HgaI GACGC 2 cut(s) 380, 1151
HhaI GCGC 2 cut(s) 1395, 1773
Hin1II CATG 8 cut(s) 164, 175, 929, 1024, 1286, 1519, 1898, 1944
Hin6I GCGC 2 cut(s) 1393, 1771
HinP1I GCGC 2 cut(s) 1393, 1771
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HindIII AAGCTT 1 cut(s) 285
HinfI GANTC 4 cut(s) 8, 987, 1253, 1438
HpaII CCGG 2 cut(s) 312, 1295
HphI GGTGA 5 cut(s) 368, 829, 1025, 1151, 1465
Hpy166II GTNNAC 3 cut(s) 127, 1038, 1503
Hpy188I TCNGA 8 cut(s) 144, 604, 748, 892, 1072, 1087, 1528, 1763
Hpy188III TCNNGA 9 cut(s) 12, 641, 854, 1295, 1442, 1687, 1821, 1880, 1950
Hpy8I GTNNAC 3 cut(s) 127, 1038, 1503
Hpy99I CGWCG 1 cut(s) 396
HpyAV CCTTC 6 cut(s) 41, 1144, 1450, 1595, 1639, 1832
HpyCH4III ACNGT 6 cut(s) 649, 835, 898, 1325, 1415, 1654
HpyCH4IV ACGT 3 cut(s) 277, 1034, 1509
HpyF10VI GCNNNNNNNGC 8 cut(s) 278, 563, 701, 1106, 1298, 1346, 1564, 1891
HpyF3I CTNAG 7 cut(s) 10, 349, 747, 933, 1383, 1778, 1881
HpySE526I ACGT 3 cut(s) 277, 1034, 1509
Hsp92II CATG 8 cut(s) 164, 175, 929, 1024, 1286, 1519, 1898, 1944
HspAI GCGC 2 cut(s) 1393, 1771
Kpn2I TCCGGA 1 cut(s) 1294
Ksp22I TGATCA 1 cut(s) 1057
LmnI GCTCC 3 cut(s) 350, 1243, 1297
Lsp1109I GCAGC 5 cut(s) 226, 694, 716, 1112, 1157
LweI GCATC 9 cut(s) 16, 412, 559, 719, 781, 1288, 1327, 1545, 1692
MaeI CTAG 4 cut(s) 210, 243, 510, 1766
MaeII ACGT 3 cut(s) 277, 1034, 1509
MaeIII GTNAC 3 cut(s) 829, 1139, 1886
MfeI CAATTG 2 cut(s) 657, 1633
MflI RGATCY 3 cut(s) 220, 1278, 1929
MhlI GDGCHC 1 cut(s) 405
MlsI TGGCCA 2 cut(s) 1051, 1271
MluCI AATT 8 cut(s) 306, 657, 900, 1170, 1237, 1407, 1633, 1672
MluNI TGGCCA 2 cut(s) 1051, 1271
MlyI GAGTC 2 cut(s) 2, 1262
MmeI TCCRAC 2 cut(s) 172, 352
Mox20I TGGCCA 2 cut(s) 1051, 1271
Mph1103I ATGCAT 1 cut(s) 1942
MroI TCCGGA 1 cut(s) 1294
MroXI GAANNNNTTC 1 cut(s) 261
MscI TGGCCA 2 cut(s) 1051, 1271
MseI TTAA 7 cut(s) 228, 383, 716, 966, 1235, 1310, 1374
MslI CAYNNNNRTG 2 cut(s) 1287, 1688
Msp20I TGGCCA 2 cut(s) 1051, 1271
MspA1I CMGCKG 4 cut(s) 353, 707, 875, 1055
MspI CCGG 2 cut(s) 312, 1295
MspR9I CCNGG 6 cut(s) 292, 303, 313, 471, 525, 1719
MunI CAATTG 2 cut(s) 657, 1633
Mva1269I GAATGC 1 cut(s) 1773
MvaI CCWGG 5 cut(s) 292, 303, 471, 525, 1719
MwoI GCNNNNNNNGC 8 cut(s) 278, 563, 701, 1106, 1298, 1346, 1564, 1891
NciI CCSGG 1 cut(s) 313
NdeI CATATG 1 cut(s) 1902
NlaIII CATG 8 cut(s) 164, 175, 929, 1024, 1286, 1519, 1898, 1944
NlaIV GGNNCC 8 cut(s) 103, 222, 402, 654, 1521, 1547, 1630, 1878
NmuCI GTSAC 2 cut(s) 829, 1139
NsiI ATGCAT 1 cut(s) 1942
NspI RCATGY 3 cut(s) 164, 1024, 1944
PaeI GCATGC 1 cut(s) 1024
PctI GAATGC 1 cut(s) 1773
PdmI GAANNNNTTC 1 cut(s) 261
PfeI GAWTC 2 cut(s) 987, 1438
PflFI GACNNNGTC 1 cut(s) 1189
PflMI CCANNNNNTGG 1 cut(s) 662
PfoI TCCNGGA 1 cut(s) 301
PkrI GCNGC 5 cut(s) 241, 706, 709, 1102, 1147
PleI GAGTC 2 cut(s) 2, 1261
PpsI GAGTC 2 cut(s) 2, 1261
Ppu21I YACGTR 2 cut(s) 278, 1510
PpuMI RGGWCCY 1 cut(s) 1877
Psp5II RGGWCCY 1 cut(s) 1877
Psp6I CCWGG 5 cut(s) 290, 301, 469, 523, 1717
PspGI CCWGG 5 cut(s) 290, 301, 469, 523, 1717
PspN4I GGNNCC 8 cut(s) 103, 222, 402, 654, 1521, 1547, 1630, 1878
PspPI GGNCC 6 cut(s) 168, 194, 299, 1328, 1520, 1877
PspPPI RGGWCCY 1 cut(s) 1877
PstI CTGCAG 2 cut(s) 487, 706
PsuI RGATCY 3 cut(s) 220, 1278, 1929
PsyI GACNNNGTC 1 cut(s) 1189
PvuII CAGCTG 4 cut(s) 353, 707, 875, 1055
RsaI GTAC 5 cut(s) 813, 1157, 1417, 1564, 1871
RsaNI GTAC 5 cut(s) 812, 1156, 1416, 1563, 1870
RseI CAYNNNNRTG 2 cut(s) 1287, 1688
SaqAI TTAA 7 cut(s) 228, 383, 716, 966, 1235, 1310, 1374
SatI GCNGC 5 cut(s) 240, 705, 708, 1101, 1146
Sau96I GGNCC 6 cut(s) 168, 194, 299, 1328, 1520, 1877
ScaI AGTACT 1 cut(s) 1157
SchI GAGTC 2 cut(s) 2, 1262
ScrFI CCNGG 6 cut(s) 292, 303, 313, 471, 525, 1719
SduI GDGCHC 1 cut(s) 405
SfaNI GCATC 9 cut(s) 16, 412, 559, 719, 781, 1288, 1327, 1545, 1692
SfcI CTRYAG 3 cut(s) 132, 483, 702
SinI GGWCC 5 cut(s) 168, 194, 299, 1520, 1877
SmiMI CAYNNNNRTG 2 cut(s) 1287, 1688
SmlI CTYRAG 2 cut(s) 113, 1853
SmoI CTYRAG 2 cut(s) 113, 1853
SphI GCATGC 1 cut(s) 1024
Sse9I AATT 8 cut(s) 306, 657, 900, 1170, 1237, 1407, 1633, 1672
SsiI CCGC 2 cut(s) 147, 1921
SspI AATATT 1 cut(s) 1079
SspMI CTAG 4 cut(s) 210, 243, 510, 1766
StyD4I CCNGG 6 cut(s) 290, 301, 311, 469, 523, 1717
StyI CCWWGG 2 cut(s) 1046, 1549
TaaI ACNGT 6 cut(s) 649, 835, 898, 1325, 1415, 1654
TaiI ACGT 3 cut(s) 280, 1037, 1512
TaqI TCGA 5 cut(s) 642, 1123, 1441, 1573, 1820
TaqII GACCGA 1 cut(s) 1935
TasI AATT 8 cut(s) 306, 657, 900, 1170, 1237, 1407, 1633, 1672
TatI WGTACW 3 cut(s) 1155, 1415, 1869
TfiI GAWTC 2 cut(s) 987, 1438
Tru1I TTAA 7 cut(s) 228, 383, 716, 966, 1235, 1310, 1374
Tru9I TTAA 7 cut(s) 228, 383, 716, 966, 1235, 1310, 1374
TscAI CASTG 5 cut(s) 335, 678, 1202, 1666, 1786
TseFI GTSAC 2 cut(s) 829, 1139
TseI GCWGC 5 cut(s) 239, 704, 707, 1100, 1145
Tsp45I GTSAC 2 cut(s) 829, 1139
TspDTI ATGAA 6 cut(s) 17, 693, 835, 1089, 1758, 1851
TspRI CASTG 5 cut(s) 335, 678, 1202, 1666, 1786
Tth111I GACNNNGTC 1 cut(s) 1189
Van91I CCANNNNNTGG 1 cut(s) 662
VpaK11BI GGWCC 5 cut(s) 168, 194, 299, 1520, 1877
XapI RAATTY 3 cut(s) 1237, 1407, 1672
XceI RCATGY 3 cut(s) 164, 1024, 1944
XmiI GTMKAC 1 cut(s) 1037
XmnI GAANNNNTTC 1 cut(s) 261
XspI CTAG 4 cut(s) 210, 243, 510, 1766
ZrmI AGTACT 1 cut(s) 1157
Zsp2I ATGCAT 1 cut(s) 1942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.