Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0008088

Physical Location & Seq

Genomic Coordinates Forward (+)

45139128 .. 45141244

Gene Structure 2117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0298800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGAAGAAGCCAGAAGTTCGCGACTCTGATGATGAGGAATATGACTTCTCAGAACCTTGCCACCCTGGTGAAGAATATAACTCCTCAGAAGGGAACTCGATCGAAACTGAAACGGCTGCGTCCAAAGTGACGATCTTGGTGAAGTTTTCGTCAAGCAAAGAGGAGAGGAACTTGTTCAAACTAAAGAGTTCAGATACCATCTCCCGCCTCAAGACCATGATCAAAACCGAGCATGGCGTCCCAAGAAAGCGCCAAATCCTAGTTTACAGAGGCAGAGTGCTCGAAAATCACGAAACCCTAGCAGCATGTAAGGTGGAAAGGTGGTCCATTATCCATGCTATTTTCTGTCCAAAAGAAATTAGCAATCCCGATGTGGGTGGGGTAGACATGGCTGTGAAAGTAGTGTCTGATGCCTTGAGGATGGAAGTGAAACCCTGGTATACCGGCCAAGAAATAAAGGCAATCATGGAGAGCATGGCAGGGATTTCCTTGGGCGATCATGTCCTCAGCCATTGGGGGAAGCTCATAGAGGATTCGAGTCGCGTATTAAGCACTGAAGGCAGCAGCAACATGATCAATAATGAGGACCAGCCCCTGATTTATTTACTGTCAAAGTTCCAGATTACTGCACGAGGCTGTGGTTGGGAAGAGGTGATTATGGTGAGTGAATCACATACTGTCCTAGATGTAAAGAAGACGGTTGAAGATTTTGCTGAGGTGAAACCTGAAAACCTGATGCTTTGTCATGGCAATGGTGGCGATGATAAGATGGTTTGTCTCGATGATGATGAGAAAACTCTTCTGTTTTATGATGTAAAAGAGAAAGCTACGATTTGGGTACTTGGCAGATCTTGGAAATTGACCATCAAGATGCCACAGGTGGGAGATAAATTCGTGCTTAGCTACGATAAGGTCGGTACCATAAAGGACATTAAGGATTATATATGTAAGAAGATGGGGATTCCATGTAGCAGTCAGAAGCTTTTTCGTAAAGGGCGGTTGCTTGATGATGAAGCAGCATCCCTAGAAACATTCAACAACCAGCTGGAAGCTGAGAATAGTGTTATTTATGTGACTTTCGGGGCTGGGGATGATGACCAAGACGACGAAATAGAAGATATAAGCTTAATATTTGAGAGAGACAACAATGAAAAGGGTTTGATTGAATACAAGGTGGTTTATAAGAGCGAATCAGATGAGAACAGTGAATCAGGTGAAAGCAGCGATTCTGATAGTGAATCATCAGATTTAGTCTCTTCTTTCGAAATCAAGTTGAGATCATCTTGCACGATTTTCGATGTCAAGGCAGCAATCGAGAGCCTAAACAGCATTCGAATTTGTACCCAAAAGCTATACTGGGATGATCAAATTCTGGAAGATTGGGAAACAGTGGACGACGACATTACAAAGTGGTCCAGTGTCCCTGCTCCATTAACAATACACTTTGAGACACCCAGTTCTAGTTCTAGTGTGGGGGCCAATAAAGAGATTGTTTCTGCAGTTGACCGTGCAGACGAAACCCTTGAAGATGTTTTGGTTCCACAAAAGGTGCTGGAAAGAATCCATGGGCAGCCAGGTTTCTTCCTCGATGGTATTTTACTCGAGGCATGCACATTGCTTCCTCAGATTGAAGCTGGTTCTGTTTTATGCTTAAACAGTGTGGTGCAGATAAATGTTACTGGGCCGAATGGTGCAACCACCAAGGTGCATGTGAACCCTTCTTACAAATTCAAGGATGTAAAAGAGAAGATTGAACTAGATTGTGGAATCCCATTTGGTTTACAGAGACTTACTCATGATGGTGATGAACTTAATGATGATATGACTATAGGGCATTATGAGGCATCGTTGGGCAGTCTGTGGAAATTAAGGTGGAACTTTTGTGGTACTTTCTGGTCATTCTTCTACCCATGGTACAAGGATTGTTGCAGGACTGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4091

Protein Analysis

646

Amino Acids

72.69

Weight (kDa)

4.75

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ubiquitin	PF00240	46 - 113	6.5e-13	Ubiquitin family
ubiquitin	PF00240	287 - 338	5.6e-06	Ubiquitin family
Rad60-SLD	PF11976	556 - 614	7.7e-07	Ubiquitin-2 like Rad60 SUMO-like
ubiquitin	PF00240	557 - 614	8.8e-07	Ubiquitin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45150
fragaria_vesca	FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020 FvH4_2g40020
malus_domestica	MD08G1033200.v1.1 MD15G1029800.v1.1
prunus_persica	Prupe.1G381700_v2.0.a1 Prupe.1G381700_v2.0.a1
pyrus_communis	pycom08g02630 pycom15g02620
rosa_chinensis	RchiOBHm_Chr6g0300731
rosa_laevigata	RLG00000011307
rosa_multiflora	Rmu_sc0003626.1_g000005
rosa_roxburghii	Rroxscaffold_7G00167470
rosa_rugosa	Rorug06G0298800
rosa_samantha	Rh6AG411500 Rh6BG418700 Rh6CG426100 Rh6DG411600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1182
Acc65I	GGTACC	1 cut(s)	917
AccB1I	GGYRCC	1 cut(s)	917
AccI	GTMKAC	2 cut(s)	384, 440
AccII	CGCG	2 cut(s)	21, 543
AciI	CCGC	2 cut(s)	205, 997
AcoI	YGGCCR	1 cut(s)	445
AcsI	RAATTY	4 cut(s)	890, 1335, 1368, 1727
AcuI	CTGAAG	1 cut(s)	576
AcyI	GRCGYC	1 cut(s)	237
AfaI	GTAC	5 cut(s)	840, 919, 1342, 1888, 1916
AfiI	CCNNNNNNNGG	3 cut(s)	90, 374, 881
AgsI	TTSAA	8 cut(s)	178, 704, 1036, 1166, 1526, 1631, 1732, 1754
AjnI	CCWGG	3 cut(s)	64, 434, 1573
AleI	CACNNNNGTG	2 cut(s)	66, 1703
AluBI	AGCT	9 cut(s)	523, 827, 903, 982, 1045, 1052, 1125, 1351, 1634
AluI	AGCT	9 cut(s)	523, 827, 903, 982, 1045, 1052, 1125, 1351, 1634
Alw21I	GWGCWC	1 cut(s)	282
Alw26I	GTCTC	5 cut(s)	782, 1134, 1258, 1442, 1780
AlwNI	CAGNNNCTG	1 cut(s)	595
Ama87I	CYCGRG	1 cut(s)	1601
AoxI	GGCC	3 cut(s)	445, 1476, 1682
ApeKI	GCWGC	8 cut(s)	116, 302, 561, 564, 1016, 1221, 1307, 1570
ApoI	RAATTY	4 cut(s)	890, 1335, 1368, 1727
Asp700I	GAANNNNTTC	1 cut(s)	173
Asp718I	GGTACC	1 cut(s)	917
AspLEI	GCGC	1 cut(s)	252
AspS9I	GGNCC	5 cut(s)	324, 586, 1413, 1476, 1682
AsuHPI	GGTGA	7 cut(s)	80, 151, 664, 673, 730, 1226, 1814
AsuII	TTCGAA	2 cut(s)	1263, 1333
AvaI	CYCGRG	1 cut(s)	1601
AvaII	GGWCC	3 cut(s)	324, 586, 1413
BanI	GGYRCC	1 cut(s)	917
BauI	CACGAG	1 cut(s)	630
BbsI	GAAGAC	1 cut(s)	701
Bbv12I	GWGCWC	1 cut(s)	282
BbvCI	CCTCAGC	2 cut(s)	506, 714
BbvI	GCAGC	8 cut(s)	103, 314, 573, 576, 1028, 1233, 1319, 1582
BccI	CCATC	7 cut(s)	206, 415, 763, 872, 949, 1583, 1793
BceAI	ACGGC	1 cut(s)	129
BcgI	CGANNNNNNTGC	4 cut(s)	262, 296, 1276, 1310
BciT130I	CCWGG	3 cut(s)	66, 436, 1575
BclI	TGATCA	3 cut(s)	219, 573, 1363
BcoDI	GTCTC	5 cut(s)	782, 1134, 1258, 1442, 1780
BfaI	CTAG	8 cut(s)	260, 299, 683, 1025, 1461, 1467, 1757, 1939
BfmI	CTRYAG	2 cut(s)	1497, 1827
BfoI	RGCGCY	1 cut(s)	253
BglII	AGATCT	1 cut(s)	848
BisI	GCNGC	8 cut(s)	117, 303, 562, 565, 1017, 1222, 1308, 1571
BlpI	GCTNAGC	1 cut(s)	899
BlsI	GCNGC	8 cut(s)	118, 304, 563, 566, 1018, 1223, 1309, 1572
Bme1390I	CCNGG	3 cut(s)	66, 436, 1575
Bme18I	GGWCC	3 cut(s)	324, 586, 1413
BmeT110I	CYCGRG	1 cut(s)	1601
BmgT120I	GGNCC	5 cut(s)	324, 586, 1413, 1476, 1682
BmiI	GGNNCC	3 cut(s)	919, 1477, 1539
BmrFI	CCNGG	3 cut(s)	66, 436, 1575
BmrI	ACTGGG	3 cut(s)	1366, 1449, 1689
BmsI	GCATC	5 cut(s)	400, 726, 861, 1028, 1853
BmuI	ACTGGG	3 cut(s)	1366, 1449, 1689
BpiI	GAAGAC	1 cut(s)	701
BplI	GAGNNNNNCTC	2 cut(s)	1777, 1809
Bpu10I	CCTNAGC	2 cut(s)	506, 714
Bpu1102I	GCTNAGC	1 cut(s)	899
Bpu14I	TTCGAA	2 cut(s)	1263, 1333
BpuEI	CTTGAG	2 cut(s)	194, 436
BsaHI	GRCGYC	1 cut(s)	237
BsaJI	CCNNGG	6 cut(s)	64, 434, 489, 1564, 1701, 1910
Bsc4I	CCNNNNNNNGG	3 cut(s)	90, 374, 881
Bse118I	RCCGGY	1 cut(s)	443
Bse1I	ACTGG	5 cut(s)	1361, 1416, 1455, 1684, 1939
Bse3DI	GCAATG	2 cut(s)	757, 1613
BseBI	CCWGG	3 cut(s)	66, 436, 1575
BseDI	CCNNGG	6 cut(s)	64, 434, 489, 1564, 1701, 1910
BseGI	GGATG	5 cut(s)	426, 1019, 1096, 1366, 1741
BseLI	CCNNNNNNNGG	3 cut(s)	90, 374, 881
BseMI	GCAATG	2 cut(s)	757, 1613
BseMII	CTCAG	6 cut(s)	63, 99, 520, 705, 1044, 1637
BseNI	ACTGG	5 cut(s)	1361, 1416, 1455, 1684, 1939
BseRI	GAGGAG	2 cut(s)	73, 176
BseXI	GCAGC	8 cut(s)	103, 314, 573, 576, 1028, 1233, 1319, 1582
BseYI	CCCAGC	1 cut(s)	1085
BsgI	GTGCAG	3 cut(s)	612, 1530, 1685
Bsh1236I	CGCG	2 cut(s)	21, 543
Bsh1285I	CGRYCG	1 cut(s)	102
BshFI	GGCC	3 cut(s)	447, 1478, 1684
BshNI	GGYRCC	1 cut(s)	917
BsiEI	CGRYCG	1 cut(s)	102
BsiHKAI	GWGCWC	1 cut(s)	282
BsiHKCI	CYCGRG	1 cut(s)	1601
BsiSI	CCGG	1 cut(s)	444
BslFI	GGGAC	2 cut(s)	224, 1406
BslI	CCNNNNNNNGG	3 cut(s)	90, 374, 881
BsmAI	GTCTC	5 cut(s)	782, 1134, 1258, 1442, 1780
BsmFI	GGGAC	2 cut(s)	224, 1406
BsmI	GAATGC	1 cut(s)	1329
BsnI	GGCC	3 cut(s)	447, 1478, 1684
BsoBI	CYCGRG	1 cut(s)	1601
Bsp119I	TTCGAA	2 cut(s)	1263, 1333
Bsp1286I	GDGCHC	1 cut(s)	282
Bsp143I	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
Bsp1720I	GCTNAGC	1 cut(s)	899
Bsp19I	CCATGG	2 cut(s)	1564, 1910
Bsp68I	TCGCGA	1 cut(s)	21
BspACI	CCGC	2 cut(s)	205, 997
BspANI	GGCC	3 cut(s)	447, 1478, 1684
BspCNI	CTCAG	6 cut(s)	62, 98, 519, 706, 1045, 1636
BspFNI	CGCG	2 cut(s)	21, 543
BspHI	TCATGA	1 cut(s)	1795
BspLI	GGNNCC	3 cut(s)	919, 1477, 1539
BspMAI	CTGCAG	1 cut(s)	1501
BspT104I	TTCGAA	2 cut(s)	1263, 1333
BspT107I	GGYRCC	1 cut(s)	917
BsrDI	GCAATG	2 cut(s)	757, 1613
BsrFI	RCCGGY	1 cut(s)	443
BsrI	ACTGG	5 cut(s)	1361, 1416, 1455, 1684, 1939
BssAI	RCCGGY	1 cut(s)	443
BssECI	CCNNGG	6 cut(s)	64, 434, 489, 1564, 1701, 1910
BssMI	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
BssNAI	GTATAC	1 cut(s)	441
BssNI	GRCGYC	1 cut(s)	237
BssSI	CACGAG	1 cut(s)	630
BssT1I	CCWWGG	4 cut(s)	489, 1564, 1701, 1910
Bst1107I	GTATAC	1 cut(s)	441
Bst2BI	CACGAG	1 cut(s)	630
Bst2UI	CCWGG	3 cut(s)	66, 436, 1575
Bst4CI	ACNGT	7 cut(s)	609, 679, 700, 1205, 1390, 1508, 1658
Bst6I	CTCTTC	3 cut(s)	642, 804, 1261
BstACI	GRCGYC	1 cut(s)	237
BstBI	TTCGAA	2 cut(s)	1263, 1333
BstC8I	GCNNGC	1 cut(s)	1609
BstDEI	CTNAG	7 cut(s)	49, 85, 506, 714, 899, 1053, 1623
BstDSI	CCRYGG	2 cut(s)	1564, 1910
BstF5I	GGATG	5 cut(s)	426, 1019, 1096, 1366, 1741
BstFNI	CGCG	2 cut(s)	21, 543
BstH2I	RGCGCY	1 cut(s)	253
BstHHI	GCGC	1 cut(s)	252
BstKTI	GATC	8 cut(s)	102, 135, 222, 499, 576, 851, 1280, 1366
BstMAI	GTCTC	5 cut(s)	782, 1134, 1258, 1442, 1780
BstMBI	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
BstMCI	CGRYCG	1 cut(s)	102
BstMWI	GCNNNNNNNGC	5 cut(s)	549, 558, 756, 1326, 1935
BstNI	CCWGG	3 cut(s)	66, 436, 1575
BstNSI	RCATGY	3 cut(s)	309, 1611, 1712
BstSCI	CCNGG	3 cut(s)	64, 434, 1573
BstSFI	CTRYAG	2 cut(s)	1497, 1827
BstUI	CGCG	2 cut(s)	21, 543
BstV1I	GCAGC	8 cut(s)	103, 314, 573, 576, 1028, 1233, 1319, 1582
BstV2I	GAAGAC	1 cut(s)	701
BstX2I	RGATCY	1 cut(s)	848
BstYI	RGATCY	1 cut(s)	848
BstZ17I	GTATAC	1 cut(s)	441
BsuRI	GGCC	3 cut(s)	447, 1478, 1684
BtgI	CCRYGG	2 cut(s)	1564, 1910
BtgZI	GCGATG	1 cut(s)	774
BtsCI	GGATG	5 cut(s)	426, 1019, 1096, 1366, 1741
BtsIMutI	CAGTG	5 cut(s)	552, 1210, 1395, 1423, 1663
BtuMI	TCGCGA	1 cut(s)	21
Cac8I	GCNNGC	1 cut(s)	1609
CaiI	CAGNNNCTG	1 cut(s)	595
CciI	TCATGA	1 cut(s)	1795
CfoI	GCGC	1 cut(s)	252
Cfr10I	RCCGGY	1 cut(s)	443
Cfr13I	GGNCC	5 cut(s)	324, 586, 1413, 1476, 1682
CseI	GACGC	2 cut(s)	108, 226
Csp6I	GTAC	5 cut(s)	839, 918, 1341, 1887, 1915
CviQI	GTAC	5 cut(s)	839, 918, 1341, 1887, 1915
DdeI	CTNAG	7 cut(s)	49, 85, 506, 714, 899, 1053, 1623
DpnI	GATC	8 cut(s)	101, 134, 221, 498, 575, 850, 1279, 1365
DpnII	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
EaeI	YGGCCR	1 cut(s)	445
Eam1104I	CTCTTC	3 cut(s)	642, 804, 1261
EarI	CTCTTC	3 cut(s)	642, 804, 1261
Eco130I	CCWWGG	4 cut(s)	489, 1564, 1701, 1910
Eco47I	GGWCC	3 cut(s)	324, 586, 1413
Eco57I	CTGAAG	1 cut(s)	576
Eco88I	CYCGRG	1 cut(s)	1601
EcoRII	CCWGG	3 cut(s)	64, 434, 1573
EcoT14I	CCWWGG	4 cut(s)	489, 1564, 1701, 1910
ErhI	CCWWGG	4 cut(s)	489, 1564, 1701, 1910
FaqI	GGGAC	2 cut(s)	224, 1406
FauI	CCCGC	1 cut(s)	212
FbaI	TGATCA	3 cut(s)	219, 573, 1363
FblI	GTMKAC	2 cut(s)	384, 440
Fnu4HI	GCNGC	8 cut(s)	117, 303, 562, 565, 1017, 1222, 1308, 1571
FokI	GGATG	5 cut(s)	433, 1006, 1103, 1373, 1748
Fsp4HI	GCNGC	8 cut(s)	117, 303, 562, 565, 1017, 1222, 1308, 1571
FspBI	CTAG	8 cut(s)	260, 299, 683, 1025, 1461, 1467, 1757, 1939
GlaI	GCGC	1 cut(s)	251
GluI	GCNGC	8 cut(s)	117, 303, 562, 565, 1017, 1222, 1308, 1571
GsaI	CCCAGC	1 cut(s)	1089
HaeII	RGCGCY	1 cut(s)	253
HaeIII	GGCC	3 cut(s)	447, 1478, 1684
HapII	CCGG	1 cut(s)	444
HgaI	GACGC	2 cut(s)	108, 226
HhaI	GCGC	1 cut(s)	252
Hin1I	GRCGYC	1 cut(s)	237
Hin6I	GCGC	1 cut(s)	250
HinP1I	GCGC	1 cut(s)	250
HincII	GTYRAC	1 cut(s)	1504
HindII	GTYRAC	1 cut(s)	1504
HindIII	AAGCTT	2 cut(s)	980, 1123
HpaII	CCGG	1 cut(s)	444
HphI	GGTGA	7 cut(s)	80, 151, 664, 673, 730, 1226, 1814
Hpy166II	GTNNAC	7 cut(s)	265, 385, 441, 1393, 1504, 1714, 1781
Hpy8I	GTNNAC	7 cut(s)	265, 385, 441, 1393, 1504, 1714, 1781
Hpy99I	CGWCG	2 cut(s)	1109, 1400
HpyAV	CCTTC	3 cut(s)	83, 551, 1728
HpyCH4III	ACNGT	7 cut(s)	609, 679, 700, 1205, 1390, 1508, 1658
HpyCH4V	TGCA	9 cut(s)	629, 1287, 1499, 1511, 1611, 1666, 1694, 1708, 1929
HpyF10VI	GCNNNNNNNGC	5 cut(s)	549, 558, 756, 1326, 1935
HpyF3I	CTNAG	7 cut(s)	49, 85, 506, 714, 899, 1053, 1623
Hsp92I	GRCGYC	1 cut(s)	237
HspAI	GCGC	1 cut(s)	250
KpnI	GGTACC	1 cut(s)	921
Ksp22I	TGATCA	3 cut(s)	219, 573, 1363
Kzo9I	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
LmnI	GCTCC	1 cut(s)	1432
Lsp1109I	GCAGC	8 cut(s)	103, 314, 573, 576, 1028, 1233, 1319, 1582
LweI	GCATC	5 cut(s)	400, 726, 861, 1028, 1853
MaeI	CTAG	8 cut(s)	260, 299, 683, 1025, 1461, 1467, 1757, 1939
MaeIII	GTNAC	3 cut(s)	127, 1072, 1675
MalI	GATC	8 cut(s)	101, 134, 221, 498, 575, 850, 1279, 1365
MboI	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
MflI	RGATCY	1 cut(s)	848
MhlI	GDGCHC	1 cut(s)	282
MluCI	AATT	7 cut(s)	357, 857, 890, 1335, 1368, 1727, 1865
MlyI	GAGTC	2 cut(s)	17, 547
MroXI	GAANNNNTTC	1 cut(s)	173
MseI	TTAA	7 cut(s)	548, 933, 1127, 1433, 1652, 1812, 1868
MslI	CAYNNNNRTG	6 cut(s)	66, 392, 750, 869, 1703, 1800
MspA1I	CMGCKG	1 cut(s)	1045
MspI	CCGG	1 cut(s)	444
MspR9I	CCNGG	3 cut(s)	66, 436, 1575
Mva1269I	GAATGC	1 cut(s)	1329
MvaI	CCWGG	3 cut(s)	66, 436, 1575
MvnI	CGCG	2 cut(s)	21, 543
MwoI	GCNNNNNNNGC	5 cut(s)	549, 558, 756, 1326, 1935
NcoI	CCATGG	2 cut(s)	1564, 1910
NdeII	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
NlaIV	GGNNCC	3 cut(s)	919, 1477, 1539
NmuCI	GTSAC	2 cut(s)	127, 1072
NruI	TCGCGA	1 cut(s)	21
NspI	RCATGY	3 cut(s)	309, 1611, 1712
NspV	TTCGAA	2 cut(s)	1263, 1333
OliI	CACNNNNGTG	2 cut(s)	66, 1703
PaeI	GCATGC	1 cut(s)	1611
PaeR7I	CTCGAG	1 cut(s)	1601
PagI	TCATGA	1 cut(s)	1795
PcsI	WCGNNNNNNNCGW	1 cut(s)	288
PctI	GAATGC	1 cut(s)	1329
PdmI	GAANNNNTTC	1 cut(s)	173
PfeI	GAWTC	9 cut(s)	533, 668, 961, 1190, 1208, 1226, 1238, 1560, 1767
PkrI	GCNGC	8 cut(s)	118, 304, 563, 566, 1018, 1223, 1309, 1572
Ple19I	CGATCG	1 cut(s)	102
PleI	GAGTC	2 cut(s)	17, 546
PpsI	GAGTC	2 cut(s)	17, 546
PsiI	TTATAA	1 cut(s)	1182
Psp6I	CCWGG	3 cut(s)	64, 434, 1573
PspFI	CCCAGC	1 cut(s)	1085
PspGI	CCWGG	3 cut(s)	64, 434, 1573
PspN4I	GGNNCC	3 cut(s)	919, 1477, 1539
PspPI	GGNCC	5 cut(s)	324, 586, 1413, 1476, 1682
PspXI	VCTCGAGB	1 cut(s)	1601
PsrI	GAACNNNNNNTAC	2 cut(s)	1706, 1738
PstI	CTGCAG	1 cut(s)	1501
PstNI	CAGNNNCTG	1 cut(s)	595
PsuI	RGATCY	1 cut(s)	848
PvuI	CGATCG	1 cut(s)	102
PvuII	CAGCTG	1 cut(s)	1045
RruI	TCGCGA	1 cut(s)	21
RsaI	GTAC	5 cut(s)	840, 919, 1342, 1888, 1916
RsaNI	GTAC	5 cut(s)	839, 918, 1341, 1887, 1915
RseI	CAYNNNNRTG	6 cut(s)	66, 392, 750, 869, 1703, 1800
SaqAI	TTAA	7 cut(s)	548, 933, 1127, 1433, 1652, 1812, 1868
SatI	GCNGC	8 cut(s)	117, 303, 562, 565, 1017, 1222, 1308, 1571
Sau3AI	GATC	8 cut(s)	99, 132, 219, 496, 573, 848, 1277, 1363
Sau96I	GGNCC	5 cut(s)	324, 586, 1413, 1476, 1682
SchI	GAGTC	2 cut(s)	17, 547
ScrFI	CCNGG	3 cut(s)	66, 436, 1575
SduI	GDGCHC	1 cut(s)	282
SfaNI	GCATC	5 cut(s)	400, 726, 861, 1028, 1853
SfcI	CTRYAG	2 cut(s)	1497, 1827
Sfr274I	CTCGAG	1 cut(s)	1601
SfuI	TTCGAA	2 cut(s)	1263, 1333
SinI	GGWCC	3 cut(s)	324, 586, 1413
SlaI	CTCGAG	1 cut(s)	1601
SmiMI	CAYNNNNRTG	6 cut(s)	66, 392, 750, 869, 1703, 1800
SmlI	CTYRAG	3 cut(s)	209, 415, 1601
SmoI	CTYRAG	3 cut(s)	209, 415, 1601
SphI	GCATGC	1 cut(s)	1611
Sse9I	AATT	7 cut(s)	357, 857, 890, 1335, 1368, 1727, 1865
SsiI	CCGC	2 cut(s)	205, 997
SspI	AATATT	1 cut(s)	1131
SspMI	CTAG	8 cut(s)	260, 299, 683, 1025, 1461, 1467, 1757, 1939
StyD4I	CCNGG	3 cut(s)	64, 434, 1573
StyI	CCWWGG	4 cut(s)	489, 1564, 1701, 1910
TaaI	ACNGT	7 cut(s)	609, 679, 700, 1205, 1390, 1508, 1658
TasI	AATT	7 cut(s)	357, 857, 890, 1335, 1368, 1727, 1865
TfiI	GAWTC	9 cut(s)	533, 668, 961, 1190, 1208, 1226, 1238, 1560, 1767
Tru1I	TTAA	7 cut(s)	548, 933, 1127, 1433, 1652, 1812, 1868
Tru9I	TTAA	7 cut(s)	548, 933, 1127, 1433, 1652, 1812, 1868
TscAI	CASTG	5 cut(s)	559, 1210, 1395, 1423, 1663
TseFI	GTSAC	2 cut(s)	127, 1072
TseI	GCWGC	8 cut(s)	116, 302, 561, 564, 1016, 1221, 1307, 1570
Tsp45I	GTSAC	2 cut(s)	127, 1072
TspDTI	ATGAA	4 cut(s)	17, 1026, 1164, 1821
TspRI	CASTG	5 cut(s)	559, 1210, 1395, 1423, 1663
VpaK11BI	GGWCC	3 cut(s)	324, 586, 1413
XapI	RAATTY	4 cut(s)	890, 1335, 1368, 1727
XceI	RCATGY	3 cut(s)	309, 1611, 1712
XhoI	CTCGAG	1 cut(s)	1601
XmiI	GTMKAC	2 cut(s)	384, 440
XmnI	GAANNNNTTC	1 cut(s)	173
XspI	CTAG	8 cut(s)	260, 299, 683, 1025, 1461, 1467, 1757, 1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.