eukaryotic translation initiation factor-related
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11480 AT1G11480 |
| fragaria_vesca | FvH4_3g03030 FvH4_3g03030 FvH4_3g03030 |
| malus_domestica | MD05G1335400.v1.1 MD10G1310800.v1.1 |
| prunus_persica | Prupe.4G030000_v2.0.a1 Prupe.4G030000_v2.0.a1 Prupe.4G030000_v2.0.a1 |
| pyrus_communis | pycom05g30680 pycom10g26180 |
| rosa_chinensis | RchiOBHm_Chr5g0004671 RchiOBHm_Chr5g0004681 |
| rosa_laevigata | RLG00000031251 |
| rosa_multiflora | Rmu_co8318215.1_g000001 Rmu_sc0002210.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00070880 |
| rosa_rugosa | Rorug04G0413200 |
| rosa_samantha | Rh5AG040800 Rh5BG040500 Rh5BG040700 Rh5CG044300 Rh5DG040500 |
| rosa_wichuraiana | Rw5G003930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 545 |
| Acc16I | TGCGCA | 1 cut(s) | 1848 |
| Acc36I | ACCTGC | 1 cut(s) | 545 |
| Acc65I | GGTACC | 1 cut(s) | 1176 |
| AccB1I | GGYRCC | 5 cut(s) | 301, 350, 415, 571, 1176 |
| AccBSI | CCGCTC | 2 cut(s) | 21, 277 |
| AccI | GTMKAC | 1 cut(s) | 829 |
| AccII | CGCG | 2 cut(s) | 1402, 1923 |
| AccIII | TCCGGA | 1 cut(s) | 587 |
| AclWI | GGATC | 4 cut(s) | 123, 964, 977, 1868 |
| AcoI | YGGCCR | 5 cut(s) | 134, 138, 182, 253, 1272 |
| AcsI | RAATTY | 3 cut(s) | 1228, 1294, 1628 |
| AcuI | CTGAAG | 3 cut(s) | 1068, 1415, 1815 |
| AcyI | GRCGYC | 2 cut(s) | 416, 572 |
| AdeI | CACNNNGTG | 1 cut(s) | 244 |
| AfaI | GTAC | 3 cut(s) | 729, 1068, 1178 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 204, 290, 434, 1922 |
| AgsI | TTSAA | 9 cut(s) | 1028, 1193, 1199, 1294, 1322, 1445, 1463, 1484, 1860 |
| AjiI | CACGTC | 2 cut(s) | 500, 1438 |
| AjnI | CCWGG | 6 cut(s) | 203, 428, 734, 1240, 1475, 1760 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1896, 1928 |
| AluBI | AGCT | 8 cut(s) | 710, 818, 1151, 1250, 1592, 1829, 1835, 1843 |
| AluI | AGCT | 8 cut(s) | 710, 818, 1151, 1250, 1592, 1829, 1835, 1843 |
| Alw21I | GWGCWC | 4 cut(s) | 249, 520, 628, 1375 |
| Alw26I | GTCTC | 4 cut(s) | 1253, 1314, 1751, 1873 |
| Alw44I | GTGCAC | 2 cut(s) | 245, 624 |
| AlwI | GGATC | 4 cut(s) | 123, 964, 977, 1868 |
| Ama87I | CYCGRG | 5 cut(s) | 380, 629, 1380, 1556, 1960 |
| Aor13HI | TCCGGA | 1 cut(s) | 587 |
| ApaI | GGGCCC | 1 cut(s) | 900 |
| ApaLI | GTGCAC | 2 cut(s) | 245, 624 |
| ApeKI | GCWGC | 2 cut(s) | 1723, 1826 |
| ApoI | RAATTY | 3 cut(s) | 1228, 1294, 1628 |
| AseI | ATTAAT | 1 cut(s) | 1425 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1389 |
| Asp718I | GGTACC | 1 cut(s) | 1176 |
| AspLEI | GCGC | 6 cut(s) | 418, 574, 1101, 1402, 1686, 1849 |
| AspS9I | GGNCC | 9 cut(s) | 165, 340, 585, 896, 897, 1138, 1617, 1900, 1952 |
| AsuC2I | CCSGG | 7 cut(s) | 93, 181, 381, 382, 1306, 1557, 1558 |
| AsuHPI | GGTGA | 2 cut(s) | 164, 1743 |
| AvaI | CYCGRG | 5 cut(s) | 380, 629, 1380, 1556, 1960 |
| AvaII | GGWCC | 2 cut(s) | 585, 1617 |
| BaeGI | GKGCMC | 3 cut(s) | 249, 628, 900 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1160, 1193 |
| BamHI | GGATCC | 1 cut(s) | 969 |
| BanI | GGYRCC | 5 cut(s) | 301, 350, 415, 571, 1176 |
| BanII | GRGCYC | 2 cut(s) | 412, 900 |
| BbsI | GAAGAC | 2 cut(s) | 633, 657 |
| Bbv12I | GWGCWC | 4 cut(s) | 249, 520, 628, 1375 |
| BbvI | GCAGC | 2 cut(s) | 1735, 1838 |
| BceAI | ACGGC | 4 cut(s) | 67, 179, 1259, 1958 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 98, 132 |
| BciT130I | CCWGG | 6 cut(s) | 205, 430, 736, 1242, 1477, 1762 |
| BclI | TGATCA | 1 cut(s) | 1162 |
| BcnI | CCSGG | 7 cut(s) | 93, 181, 381, 382, 1306, 1557, 1558 |
| BcoDI | GTCTC | 4 cut(s) | 1253, 1314, 1751, 1873 |
| BfaI | CTAG | 2 cut(s) | 621, 891 |
| BfoI | RGCGCY | 3 cut(s) | 419, 575, 1102 |
| BfuAI | ACCTGC | 1 cut(s) | 545 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 806, 1908 |
| BisI | GCNGC | 5 cut(s) | 141, 419, 1724, 1727, 1827 |
| BlpI | GCTNAGC | 1 cut(s) | 519 |
| BlsI | GCNGC | 5 cut(s) | 142, 420, 1725, 1728, 1828 |
| Bme18I | GGWCC | 2 cut(s) | 585, 1617 |
| BmeT110I | CYCGRG | 5 cut(s) | 380, 629, 1380, 1556, 1960 |
| BmgBI | CACGTC | 2 cut(s) | 500, 1438 |
| BmgT120I | GGNCC | 9 cut(s) | 165, 340, 585, 896, 897, 1138, 1617, 1900, 1952 |
| BmrI | ACTGGG | 1 cut(s) | 1272 |
| BmsI | GCATC | 1 cut(s) | 787 |
| BmuI | ACTGGG | 1 cut(s) | 1272 |
| BpiI | GAAGAC | 2 cut(s) | 633, 657 |
| BpmI | CTGGAG | 1 cut(s) | 1137 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 519 |
| BpuEI | CTTGAG | 2 cut(s) | 23, 1859 |
| BpuMI | CCSGG | 7 cut(s) | 93, 181, 381, 382, 1306, 1557, 1558 |
| BsaBI | GATNNNNATC | 2 cut(s) | 655, 1599 |
| BsaHI | GRCGYC | 2 cut(s) | 416, 572 |
| BsaI | GGTCTC | 2 cut(s) | 1314, 1751 |
| BsaWI | WCCGGW | 3 cut(s) | 587, 1619, 1753 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 204, 290, 434, 1922 |
| Bse118I | RCCGGY | 6 cut(s) | 132, 136, 347, 364, 568, 1132 |
| Bse1I | ACTGG | 6 cut(s) | 673, 1154, 1267, 1275, 1392, 1685 |
| Bse3DI | GCAATG | 1 cut(s) | 1693 |
| Bse8I | GATNNNNATC | 2 cut(s) | 655, 1599 |
| BseAI | TCCGGA | 1 cut(s) | 587 |
| BseBI | CCWGG | 6 cut(s) | 205, 430, 736, 1242, 1477, 1762 |
| BseGI | GGATG | 8 cut(s) | 277, 295, 410, 669, 771, 775, 900, 1600 |
| BseJI | GATNNNNATC | 2 cut(s) | 655, 1599 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 204, 290, 434, 1922 |
| BseMI | GCAATG | 1 cut(s) | 1693 |
| BseMII | CTCAG | 8 cut(s) | 533, 555, 1049, 1248, 1325, 1508, 1884, 1982 |
| BseNI | ACTGG | 6 cut(s) | 673, 1154, 1267, 1275, 1392, 1685 |
| BseRI | GAGGAG | 2 cut(s) | 450, 1419 |
| BseSI | GKGCMC | 3 cut(s) | 249, 628, 900 |
| BseX3I | CGGCCG | 2 cut(s) | 134, 138 |
| BseXI | GCAGC | 2 cut(s) | 1735, 1838 |
| BseYI | CCCAGC | 1 cut(s) | 343 |
| BsgI | GTGCAG | 3 cut(s) | 419, 491, 1796 |
| Bsh1236I | CGCG | 2 cut(s) | 1402, 1923 |
| Bsh1285I | CGRYCG | 5 cut(s) | 133, 137, 141, 159, 1891 |
| BshNI | GGYRCC | 5 cut(s) | 301, 350, 415, 571, 1176 |
| BsiEI | CGRYCG | 5 cut(s) | 133, 137, 141, 159, 1891 |
| BsiHKAI | GWGCWC | 4 cut(s) | 249, 520, 628, 1375 |
| BsiHKCI | CYCGRG | 5 cut(s) | 380, 629, 1380, 1556, 1960 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 204, 290, 434, 1922 |
| BsmAI | GTCTC | 4 cut(s) | 1253, 1314, 1751, 1873 |
| BsmI | GAATGC | 4 cut(s) | 330, 1360, 1567, 1911 |
| Bso31I | GGTCTC | 2 cut(s) | 1314, 1751 |
| BsoBI | CYCGRG | 5 cut(s) | 380, 629, 1380, 1556, 1960 |
| Bsp120I | GGGCCC | 1 cut(s) | 896 |
| Bsp1286I | GDGCHC | 6 cut(s) | 249, 412, 520, 628, 900, 1375 |
| Bsp13I | TCCGGA | 1 cut(s) | 587 |
| Bsp1407I | TGTACA | 1 cut(s) | 727 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 519 |
| Bsp19I | CCATGG | 1 cut(s) | 1816 |
| BspCNI | CTCAG | 8 cut(s) | 532, 556, 1048, 1249, 1324, 1509, 1883, 1981 |
| BspEI | TCCGGA | 1 cut(s) | 587 |
| BspFNI | CGCG | 2 cut(s) | 1402, 1923 |
| BspMI | ACCTGC | 1 cut(s) | 545 |
| BspPI | GGATC | 4 cut(s) | 123, 964, 977, 1868 |
| BspT107I | GGYRCC | 5 cut(s) | 301, 350, 415, 571, 1176 |
| BspTNI | GGTCTC | 2 cut(s) | 1314, 1751 |
| BsrBI | CCGCTC | 2 cut(s) | 21, 277 |
| BsrDI | GCAATG | 1 cut(s) | 1693 |
| BsrFI | RCCGGY | 6 cut(s) | 132, 136, 347, 364, 568, 1132 |
| BsrGI | TGTACA | 1 cut(s) | 727 |
| BsrI | ACTGG | 6 cut(s) | 673, 1154, 1267, 1275, 1392, 1685 |
| BssAI | RCCGGY | 6 cut(s) | 132, 136, 347, 364, 568, 1132 |
| BssNI | GRCGYC | 2 cut(s) | 416, 572 |
| BssT1I | CCWWGG | 3 cut(s) | 804, 1496, 1816 |
| Bst2UI | CCWGG | 6 cut(s) | 205, 430, 736, 1242, 1477, 1762 |
| Bst4CI | ACNGT | 6 cut(s) | 176, 1009, 1204, 1449, 1734, 1788 |
| Bst6I | CTCTTC | 1 cut(s) | 1667 |
| BstACI | GRCGYC | 2 cut(s) | 416, 572 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 244 |
| BstAUI | TGTACA | 1 cut(s) | 727 |
| BstDEI | CTNAG | 9 cut(s) | 519, 564, 1035, 1104, 1257, 1311, 1517, 1870, 1968 |
| BstDSI | CCRYGG | 3 cut(s) | 1275, 1816, 1921 |
| BstF5I | GGATG | 8 cut(s) | 277, 295, 410, 669, 771, 775, 900, 1600 |
| BstFNI | CGCG | 2 cut(s) | 1402, 1923 |
| BstH2I | RGCGCY | 3 cut(s) | 419, 575, 1102 |
| BstHHI | GCGC | 6 cut(s) | 418, 574, 1101, 1402, 1686, 1849 |
| BstMAI | GTCTC | 4 cut(s) | 1253, 1314, 1751, 1873 |
| BstMCI | CGRYCG | 5 cut(s) | 133, 137, 141, 159, 1891 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 244, 806, 815, 1777, 1832, 1908, 1951 |
| BstNI | CCWGG | 6 cut(s) | 205, 430, 736, 1242, 1477, 1762 |
| BstSLI | GKGCMC | 3 cut(s) | 249, 628, 900 |
| BstUI | CGCG | 2 cut(s) | 1402, 1923 |
| BstV1I | GCAGC | 2 cut(s) | 1735, 1838 |
| BstV2I | GAAGAC | 2 cut(s) | 633, 657 |
| BstX2I | RGATCY | 2 cut(s) | 969, 1873 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 582 |
| BstYI | RGATCY | 2 cut(s) | 969, 1873 |
| BstZI | CGGCCG | 2 cut(s) | 134, 138 |
| BtgI | CCRYGG | 3 cut(s) | 1275, 1816, 1921 |
| BtrI | CACGTC | 2 cut(s) | 500, 1438 |
| BtsCI | GGATG | 8 cut(s) | 277, 295, 410, 669, 771, 775, 900, 1600 |
| BtsI | GCAGTG | 1 cut(s) | 543 |
| BtsIMutI | CAGTG | 1 cut(s) | 543 |
| BveI | ACCTGC | 1 cut(s) | 545 |
| CfoI | GCGC | 6 cut(s) | 418, 574, 1101, 1402, 1686, 1849 |
| Cfr10I | RCCGGY | 6 cut(s) | 132, 136, 347, 364, 568, 1132 |
| Cfr13I | GGNCC | 9 cut(s) | 165, 340, 585, 896, 897, 1138, 1617, 1900, 1952 |
| Cfr42I | CCGCGG | 1 cut(s) | 1924 |
| Cfr9I | CCCGGG | 2 cut(s) | 380, 1556 |
| CseI | GACGC | 3 cut(s) | 43, 244, 1271 |
| Csp6I | GTAC | 3 cut(s) | 728, 1067, 1177 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1116, 1151 |
| CviAII | CATG | 6 cut(s) | 31, 617, 1166, 1490, 1511, 1817 |
| CviQI | GTAC | 3 cut(s) | 728, 1067, 1177 |
| DdeI | CTNAG | 9 cut(s) | 519, 564, 1035, 1104, 1257, 1311, 1517, 1870, 1968 |
| DinI | GGCGCC | 2 cut(s) | 417, 573 |
| DraI | TTTAAA | 1 cut(s) | 1299 |
| DraIII | CACNNNGTG | 1 cut(s) | 244 |
| EaeI | YGGCCR | 5 cut(s) | 134, 138, 182, 253, 1272 |
| EagI | CGGCCG | 2 cut(s) | 134, 138 |
| Eam1104I | CTCTTC | 1 cut(s) | 1667 |
| EarI | CTCTTC | 1 cut(s) | 1667 |
| EciI | GGCGGA | 1 cut(s) | 1780 |
| EclXI | CGGCCG | 2 cut(s) | 134, 138 |
| Eco130I | CCWWGG | 3 cut(s) | 804, 1496, 1816 |
| Eco147I | AGGCCT | 1 cut(s) | 1966 |
| Eco24I | GRGCYC | 2 cut(s) | 412, 900 |
| Eco31I | GGTCTC | 2 cut(s) | 1314, 1751 |
| Eco47I | GGWCC | 2 cut(s) | 585, 1617 |
| Eco52I | CGGCCG | 2 cut(s) | 134, 138 |
| Eco57I | CTGAAG | 3 cut(s) | 1068, 1415, 1815 |
| Eco88I | CYCGRG | 5 cut(s) | 380, 629, 1380, 1556, 1960 |
| EcoO109I | RGGNCCY | 1 cut(s) | 896 |
| EcoRI | GAATTC | 1 cut(s) | 1228 |
| EcoRII | CCWGG | 6 cut(s) | 203, 428, 734, 1240, 1475, 1760 |
| EcoT14I | CCWWGG | 3 cut(s) | 804, 1496, 1816 |
| EcoT38I | GRGCYC | 2 cut(s) | 412, 900 |
| EgeI | GGCGCC | 2 cut(s) | 417, 573 |
| EheI | GGCGCC | 2 cut(s) | 417, 573 |
| ErhI | CCWWGG | 3 cut(s) | 804, 1496, 1816 |
| FaeI | CATG | 6 cut(s) | 34, 620, 1169, 1493, 1514, 1820 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 212, 244 |
| FatI | CATG | 6 cut(s) | 30, 616, 1165, 1489, 1510, 1816 |
| FauI | CCCGC | 4 cut(s) | 14, 205, 314, 1928 |
| FbaI | TGATCA | 1 cut(s) | 1162 |
| FblI | GTMKAC | 1 cut(s) | 829 |
| Fnu4HI | GCNGC | 5 cut(s) | 141, 419, 1724, 1727, 1827 |
| FokI | GGATG | 8 cut(s) | 284, 302, 417, 656, 778, 782, 887, 1587 |
| FriOI | GRGCYC | 2 cut(s) | 412, 900 |
| FseI | GGCCGGCC | 1 cut(s) | 140 |
| Fsp4HI | GCNGC | 5 cut(s) | 141, 419, 1724, 1727, 1827 |
| FspBI | CTAG | 2 cut(s) | 621, 891 |
| FspI | TGCGCA | 1 cut(s) | 1848 |
| GlaI | GCGC | 6 cut(s) | 417, 573, 1100, 1401, 1685, 1848 |
| GluI | GCNGC | 5 cut(s) | 141, 419, 1724, 1727, 1827 |
| GsaI | CCCAGC | 1 cut(s) | 347 |
| GsuI | CTGGAG | 1 cut(s) | 1137 |
| HaeII | RGCGCY | 3 cut(s) | 419, 575, 1102 |
| HgaI | GACGC | 3 cut(s) | 43, 244, 1271 |
| HhaI | GCGC | 6 cut(s) | 418, 574, 1101, 1402, 1686, 1849 |
| Hin1I | GRCGYC | 2 cut(s) | 416, 572 |
| Hin1II | CATG | 6 cut(s) | 34, 620, 1169, 1493, 1514, 1820 |
| Hin6I | GCGC | 6 cut(s) | 416, 572, 1099, 1400, 1684, 1847 |
| HinP1I | GCGC | 6 cut(s) | 416, 572, 1099, 1400, 1684, 1847 |
| HincII | GTYRAC | 1 cut(s) | 1411 |
| HindII | GTYRAC | 1 cut(s) | 1411 |
| HinfI | GANTC | 4 cut(s) | 223, 752, 1088, 1573 |
| HphI | GGTGA | 2 cut(s) | 164, 1743 |
| Hpy166II | GTNNAC | 6 cut(s) | 247, 497, 626, 728, 830, 1411 |
| Hpy188III | TCNNGA | 9 cut(s) | 232, 287, 588, 631, 1319, 1382, 1796, 1838, 1860 |
| Hpy8I | GTNNAC | 6 cut(s) | 247, 497, 626, 728, 830, 1411 |
| Hpy99I | CGWCG | 1 cut(s) | 196 |
| HpyAV | CCTTC | 6 cut(s) | 93, 238, 538, 628, 934, 1390 |
| HpyCH4III | ACNGT | 6 cut(s) | 176, 1009, 1204, 1449, 1734, 1788 |
| HpyCH4IV | ACGT | 3 cut(s) | 191, 499, 1437 |
| HpyCH4V | TGCA | 9 cut(s) | 247, 400, 472, 626, 983, 1169, 1565, 1669, 1813 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 244, 806, 815, 1777, 1832, 1908, 1951 |
| HpyF3I | CTNAG | 9 cut(s) | 519, 564, 1035, 1104, 1257, 1311, 1517, 1870, 1968 |
| HpySE526I | ACGT | 3 cut(s) | 191, 499, 1437 |
| Hsp92I | GRCGYC | 2 cut(s) | 416, 572 |
| Hsp92II | CATG | 6 cut(s) | 34, 620, 1169, 1493, 1514, 1820 |
| HspAI | GCGC | 6 cut(s) | 416, 572, 1099, 1400, 1684, 1847 |
| KasI | GGCGCC | 2 cut(s) | 415, 571 |
| Kpn2I | TCCGGA | 1 cut(s) | 587 |
| KpnI | GGTACC | 1 cut(s) | 1180 |
| KroI | GCCGGC | 2 cut(s) | 136, 568 |
| KroNI | GCCGGC | 2 cut(s) | 138, 570 |
| Ksp22I | TGATCA | 1 cut(s) | 1162 |
| KspI | CCGCGG | 1 cut(s) | 1924 |
| LmnI | GCTCC | 4 cut(s) | 94, 415, 1156, 1279 |
| Lsp1109I | GCAGC | 2 cut(s) | 1735, 1838 |
| LweI | GCATC | 1 cut(s) | 787 |
| MaeI | CTAG | 2 cut(s) | 621, 891 |
| MaeII | ACGT | 3 cut(s) | 191, 499, 1437 |
| MaeIII | GTNAC | 7 cut(s) | 125, 559, 749, 945, 1016, 1113, 1979 |
| MbiI | CCGCTC | 2 cut(s) | 21, 277 |
| MboII | GAAGA | 7 cut(s) | 19, 22, 633, 657, 1074, 1684, 1711 |
| MfeI | CAATTG | 1 cut(s) | 1325 |
| MflI | RGATCY | 2 cut(s) | 969, 1873 |
| MhlI | GDGCHC | 6 cut(s) | 249, 412, 520, 628, 900, 1375 |
| Mly113I | GGCGCC | 2 cut(s) | 416, 572 |
| MlyI | GAGTC | 3 cut(s) | 217, 746, 1567 |
| MmeI | TCCRAC | 1 cut(s) | 1595 |
| MroI | TCCGGA | 1 cut(s) | 587 |
| MroNI | GCCGGC | 2 cut(s) | 136, 568 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1389 |
| MseI | TTAA | 5 cut(s) | 480, 1109, 1298, 1425, 1883 |
| MslI | CAYNNNNRTG | 4 cut(s) | 213, 335, 580, 621 |
| MspA1I | CMGCKG | 3 cut(s) | 710, 1250, 1923 |
| MunI | CAATTG | 1 cut(s) | 1325 |
| Mva1269I | GAATGC | 4 cut(s) | 330, 1360, 1567, 1911 |
| MvaI | CCWGG | 6 cut(s) | 205, 430, 736, 1242, 1477, 1762 |
| MvnI | CGCG | 2 cut(s) | 1402, 1923 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 244, 806, 815, 1777, 1832, 1908, 1951 |
| NaeI | GCCGGC | 2 cut(s) | 138, 570 |
| NarI | GGCGCC | 2 cut(s) | 416, 572 |
| NciI | CCSGG | 7 cut(s) | 93, 181, 381, 382, 1306, 1557, 1558 |
| NcoI | CCATGG | 1 cut(s) | 1816 |
| NgoMIV | GCCGGC | 2 cut(s) | 136, 568 |
| NlaIII | CATG | 6 cut(s) | 34, 620, 1169, 1493, 1514, 1820 |
| NmeAIII | GCCGAG | 1 cut(s) | 379 |
| NmuCI | GTSAC | 2 cut(s) | 559, 749 |
| NsbI | TGCGCA | 1 cut(s) | 1848 |
| PaeR7I | CTCGAG | 2 cut(s) | 629, 1380 |
| PaqCI | CACCTGC | 1 cut(s) | 545 |
| PasI | CCCWGGG | 2 cut(s) | 429, 1476 |
| PceI | AGGCCT | 1 cut(s) | 1966 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 165 |
| PctI | GAATGC | 4 cut(s) | 330, 1360, 1567, 1911 |
| PdiI | GCCGGC | 2 cut(s) | 138, 570 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1389 |
| PfeI | GAWTC | 1 cut(s) | 1088 |
| PkrI | GCNGC | 5 cut(s) | 142, 420, 1725, 1728, 1828 |
| Ple19I | CGATCG | 2 cut(s) | 159, 1891 |
| PleI | GAGTC | 3 cut(s) | 217, 746, 1567 |
| PluTI | GGCGCC | 2 cut(s) | 419, 575 |
| PpsI | GAGTC | 3 cut(s) | 217, 746, 1567 |
| PshBI | ATTAAT | 1 cut(s) | 1425 |
| Psp6I | CCWGG | 6 cut(s) | 203, 428, 734, 1240, 1475, 1760 |
| PspFI | CCCAGC | 1 cut(s) | 343 |
| PspGI | CCWGG | 6 cut(s) | 203, 428, 734, 1240, 1475, 1760 |
| PspOMI | GGGCCC | 1 cut(s) | 896 |
| PspPI | GGNCC | 9 cut(s) | 165, 340, 585, 896, 897, 1138, 1617, 1900, 1952 |
| PsuI | RGATCY | 2 cut(s) | 969, 1873 |
| PvuI | CGATCG | 2 cut(s) | 159, 1891 |
| PvuII | CAGCTG | 2 cut(s) | 710, 1250 |
| RigI | GGCCGGCC | 1 cut(s) | 140 |
| RsaI | GTAC | 3 cut(s) | 729, 1068, 1178 |
| RsaNI | GTAC | 3 cut(s) | 728, 1067, 1177 |
| RseI | CAYNNNNRTG | 4 cut(s) | 213, 335, 580, 621 |
| SacII | CCGCGG | 1 cut(s) | 1924 |
| SaqAI | TTAA | 5 cut(s) | 480, 1109, 1298, 1425, 1883 |
| SatI | GCNGC | 5 cut(s) | 141, 419, 1724, 1727, 1827 |
| Sau96I | GGNCC | 9 cut(s) | 165, 340, 585, 896, 897, 1138, 1617, 1900, 1952 |
| SchI | GAGTC | 3 cut(s) | 217, 746, 1567 |
| SduI | GDGCHC | 6 cut(s) | 249, 412, 520, 628, 900, 1375 |
| SfaNI | GCATC | 1 cut(s) | 787 |
| SfoI | GGCGCC | 2 cut(s) | 417, 573 |
| Sfr274I | CTCGAG | 2 cut(s) | 629, 1380 |
| Sfr303I | CCGCGG | 1 cut(s) | 1924 |
| SgrBI | CCGCGG | 1 cut(s) | 1924 |
| SinI | GGWCC | 2 cut(s) | 585, 1617 |
| SlaI | CTCGAG | 2 cut(s) | 629, 1380 |
| SmaI | CCCGGG | 2 cut(s) | 382, 1558 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 213, 335, 580, 621 |
| SmlI | CTYRAG | 4 cut(s) | 38, 629, 1380, 1838 |
| SmoI | CTYRAG | 4 cut(s) | 38, 629, 1380, 1838 |
| SseBI | AGGCCT | 1 cut(s) | 1966 |
| SspDI | GGCGCC | 2 cut(s) | 415, 571 |
| SspI | AATATT | 1 cut(s) | 691 |
| SspMI | CTAG | 2 cut(s) | 621, 891 |
| StuI | AGGCCT | 1 cut(s) | 1966 |
| StyI | CCWWGG | 3 cut(s) | 804, 1496, 1816 |
| TaaI | ACNGT | 6 cut(s) | 176, 1009, 1204, 1449, 1734, 1788 |
| TaiI | ACGT | 3 cut(s) | 194, 502, 1440 |
| TaqI | TCGA | 5 cut(s) | 5, 630, 659, 1381, 1608 |
| TatI | WGTACW | 2 cut(s) | 727, 1066 |
| TauI | GCSGC | 3 cut(s) | 143, 421, 1729 |
| TfiI | GAWTC | 1 cut(s) | 1088 |
| Tru1I | TTAA | 5 cut(s) | 480, 1109, 1298, 1425, 1883 |
| Tru9I | TTAA | 5 cut(s) | 480, 1109, 1298, 1425, 1883 |
| TscAI | CASTG | 1 cut(s) | 543 |
| TseFI | GTSAC | 2 cut(s) | 559, 749 |
| TseI | GCWGC | 2 cut(s) | 1723, 1826 |
| Tsp45I | GTSAC | 2 cut(s) | 559, 749 |
| TspDTI | ATGAA | 3 cut(s) | 839, 1224, 1241 |
| TspGWI | ACGGA | 1 cut(s) | 128 |
| TspMI | CCCGGG | 2 cut(s) | 380, 1556 |
| TspRI | CASTG | 1 cut(s) | 543 |
| VneI | GTGCAC | 2 cut(s) | 245, 624 |
| VpaK11BI | GGWCC | 2 cut(s) | 585, 1617 |
| VspI | ATTAAT | 1 cut(s) | 1425 |
| XapI | RAATTY | 3 cut(s) | 1228, 1294, 1628 |
| XhoI | CTCGAG | 2 cut(s) | 629, 1380 |
| XmaI | CCCGGG | 2 cut(s) | 380, 1556 |
| XmiI | GTMKAC | 1 cut(s) | 829 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1389 |
| XspI | CTAG | 2 cut(s) | 621, 891 |