Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0007473

Physical Location & Seq

Genomic Coordinates Forward (+)

2957020 .. 2961175

Gene Structure 4156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG040500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1818 bp

ATGGGGCGGCCCGATCACCGTTCCCGGCCACATACGTCTCCCGCCACCAGGCACTTTGATGACAAGACTCCGTTTCTAGCTCACTCTGTGCACATTGGGCGGAACTTTGATGAGGATGAACGCAAGCCACTGGATGGTGTGTCGGCGCCGCGCCGGATTATAAGCGATGACAGCATTCGGGTGGCCCCAGCCCGTGCCGAGCCGAAACCGGTGTTTGCATCCCCTGGGGGATTATCAGGCGTGCAGGGATGGGCTGCGGCACCGCAGTCCCCCAGGGAAGCGGTGAGTTCTTACTCAGAGAGGGTTAGTGACGCGGTGGGGGTTAATTCTCAGAGTGTAAGTGGTAATGGTGGGCGTGGCGGTGGGAGTGGTGCTCAGCCGAATGCATGGGCAGTTAGGAAGGAGATGGCGGGTGTTACTGAGCCGGTGCAATCTGCATGGTCCGGACAGAGTGCTGTTGTGAAGTTGGCTCATGCTAGTGCACTTGAGAAGGTGTCTTCGGGTAGATGGCAATCAAAGCCTTCAATCCAGTATCAGGCAAATAACAACGAGGTTGCTAGGTCAGCTGAAACAGAGGGTGGTCTACATTCCAATGGTTATGGTAGTGACGCTTACAAGAGGATGGATGTGATGGTTGAGCGGCAAAACTATGATGCCACCTTGGCAATACAAATTGAAAGAGGTCTACAAATGGATGATGGGATTCAGAATGTTAGGAAAGAGTTGCCAGATTATGAGAGGGCTAGGGGACCCATCATTTCAGAAGTAAAAGAAAGGAGCCCAATGGTTCGGAAGGAGTTACCTGATTATGAGAGGGCTAGGGCCCCCATCGTTTCAGAAGTAAGAGAAAGGAAGCCAACTGTTTATAGTAACAGGGTTCAACCTGCTCAGGCTGATGGCAAATATGGTCAGACTGAAGTGCAGCCCTTTGCTTCTTCAGAACACGTAGAGCGCCCTAAGTTAAAGTTACTTCCAAGAACAAGGCCAGTGGACCATTTGGAAGCTCCAGTTGGTGATCATGCACAGGAGTACCAGCACCCTGTTTATGTTGAAACTGTCAATGAAGTGTATGGAAATATGAATTCTACAAAACCTGGTTCAGCAGGCTCTGAGAGTGGGAAACTGGCCGTGGAGCGTCCAAAATTGAATTTAAAGCCACGGTCTCAGCCTCTTGAACAATTGGATGCAATTGCCGAAAGAGAGAGGAATGCGTTATTTGGTGGTGCTCGCCCACGAGAACTGGTTCTTAAGGAGCGAGGGGTTGACGATGTTGTGATCAACAATGCTGACATAGTTCAGCATTCTGACAAGGTTGAGCATCATGTTGCCAGGGCTGAAAATCATGTTCCAAGGGCTGAACATCTCTCTCCAAAGCCTGATAGAGTTCCTGGGCATGTCAATCCTACTCGCCACCCTGATAAAGCTGAGAATCATCCTTTTGATCAGAGAACTGGAAAGAAATTTGATAGGAGGGATAATCAAGTTGAGAGAGTAGATATGCAGAAGAGGAATTGGCGTAATGATGGGAGGAAGAACAACAGAGAGACTGATAGGCAGCCGCAACAGTCAGAGAGGCCACCATCACCAGAGACCTGGCGGAAGCCTGAACAGCCAAAACCATCATCTCCTGATGGTGCTGGCCTGCATCACGGAAAAGCAGCTTCAGCTCTTGAGCTTGCGCAAGCATTTTCCAGATCAGTCTCAGATCCAAAATTAAACGATCGAATTTCTGGCCAAAGGGGAATTCCTAGCCGCGGTCAAATACCTTTTTCACGGTTGATGGGCCCAAGTCCAAGGCCTCAGATAAATGGTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

eIF-4B

Protein Analysis

605

Amino Acids

67.05

Weight (kDa)

9.46

Isoelectric Point (pI)

43.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007473)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11480 AT1G11480
fragaria_vesca	FvH4_3g03030 FvH4_3g03030 FvH4_3g03030
malus_domestica	MD05G1335400.v1.1 MD10G1310800.v1.1
prunus_persica	Prupe.4G030000_v2.0.a1 Prupe.4G030000_v2.0.a1 Prupe.4G030000_v2.0.a1
pyrus_communis	pycom05g30680 pycom10g26180
rosa_chinensis	RchiOBHm_Chr5g0004671 RchiOBHm_Chr5g0004681
rosa_laevigata	RLG00000031251
rosa_multiflora	Rmu_co8318215.1_g000001 Rmu_sc0002210.1_g000003
rosa_roxburghii	Rroxscaffold_1G00070880
rosa_rugosa	Rorug04G0413200
rosa_samantha	Rh5AG040800 Rh5BG040500 Rh5BG040700 Rh5CG044300 Rh5DG040500
rosa_wichuraiana	Rw5G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	161
Acc16I	TGCGCA	1 cut(s)	1680
Acc36I	ACCTGC	1 cut(s)	892
AccB1I	GGYRCC	2 cut(s)	145, 259
AccB7I	CCANNNNNTGG	1 cut(s)	134
AccBSI	CCGCTC	1 cut(s)	640
AccI	GTMKAC	2 cut(s)	583, 685
AccII	CGCG	3 cut(s)	151, 314, 1755
AccIII	TCCGGA	1 cut(s)	443
AclWI	GGATC	1 cut(s)	1700
AcoI	YGGCCR	3 cut(s)	26, 1125, 1732
AcsI	RAATTY	5 cut(s)	1081, 1147, 1460, 1725, 1743
AcuI	CTGAAG	3 cut(s)	921, 936, 1647
AcyI	GRCGYC	1 cut(s)	146
AdeI	CACNNNGTG	1 cut(s)	88
AfaI	GTAC	1 cut(s)	1031
AfiI	CCNNNNNNNGG	4 cut(s)	48, 134, 535, 1754
AflII	CTTAAG	1 cut(s)	1247
AflIII	ACRYGT	1 cut(s)	943
AgeI	ACCGGT	1 cut(s)	208
AgsI	TTSAA	6 cut(s)	525, 677, 881, 1052, 1147, 1175
AjnI	CCWGG	7 cut(s)	47, 223, 272, 1093, 1328, 1387, 1592
AjuI	GAANNNNNNNTTGG	4 cut(s)	993, 1025, 1728, 1760
AluBI	AGCT	7 cut(s)	80, 566, 1004, 1424, 1661, 1667, 1675
AluI	AGCT	7 cut(s)	80, 566, 1004, 1424, 1661, 1667, 1675
Alw21I	GWGCWC	4 cut(s)	93, 376, 484, 1228
Alw26I	GTCTC	5 cut(s)	42, 1167, 1538, 1583, 1705
Alw44I	GTGCAC	2 cut(s)	89, 480
AlwI	GGATC	1 cut(s)	1700
AlwNI	CAGNNNCTG	1 cut(s)	1109
Aor13HI	TCCGGA	1 cut(s)	443
ApaI	GGGCCC	2 cut(s)	826, 1787
ApaLI	GTGCAC	2 cut(s)	89, 480
ApeKI	GCWGC	4 cut(s)	254, 922, 1555, 1658
ApoI	RAATTY	5 cut(s)	1081, 1147, 1460, 1725, 1743
AsiGI	ACCGGT	1 cut(s)	208
Asp700I	GAANNNNTTC	1 cut(s)	1242
AspLEI	GCGC	4 cut(s)	148, 153, 954, 1681
AspS9I	GGNCC	9 cut(s)	9, 184, 441, 749, 822, 823, 991, 1783, 1784
AsuC2I	CCSGG	1 cut(s)	25
AsuHPI	GGTGA	4 cut(s)	8, 295, 1025, 1575
AvaII	GGWCC	3 cut(s)	441, 749, 991
BaeGI	GKGCMC	4 cut(s)	93, 484, 826, 1787
BaeI	ACNNNNGTAYC	2 cut(s)	1013, 1046
BalI	TGGCCA	1 cut(s)	1734
BanI	GGYRCC	2 cut(s)	145, 259
BanII	GRGCYC	3 cut(s)	782, 826, 1787
BauI	CACGAG	1 cut(s)	1233
BbsI	GAAGAC	1 cut(s)	489
Bbv12I	GWGCWC	4 cut(s)	93, 376, 484, 1228
BbvI	GCAGC	4 cut(s)	241, 934, 1567, 1670
BceAI	ACGGC	1 cut(s)	1112
BciT130I	CCWGG	7 cut(s)	49, 225, 274, 1095, 1330, 1389, 1594
BclI	TGATCA	3 cut(s)	1015, 1275, 1441
BcnI	CCSGG	1 cut(s)	25
BcoDI	GTCTC	5 cut(s)	42, 1167, 1538, 1583, 1705
BfaI	CTAG	6 cut(s)	77, 477, 558, 744, 819, 1749
BfoI	RGCGCY	2 cut(s)	149, 955
BfrI	CTTAAG	1 cut(s)	1247
BfuAI	ACCTGC	1 cut(s)	892
BglI	GCCNNNNNGGC	1 cut(s)	662
BlpI	GCTNAGC	1 cut(s)	375
Bme1390I	CCNGG	8 cut(s)	25, 49, 225, 274, 1095, 1330, 1389, 1594
Bme18I	GGWCC	3 cut(s)	441, 749, 991
BmgT120I	GGNCC	9 cut(s)	9, 184, 441, 749, 822, 823, 991, 1783, 1784
BmiI	GGNNCC	9 cut(s)	147, 186, 261, 750, 751, 779, 824, 825, 1785
BmrFI	CCNGG	8 cut(s)	25, 49, 225, 274, 1095, 1330, 1389, 1594
BmsI	GCATC	5 cut(s)	227, 643, 1174, 1327, 1654
BpiI	GAAGAC	1 cut(s)	489
BplI	GAGNNNNNCTC	2 cut(s)	358, 390
BpmI	CTGGAG	1 cut(s)	990
Bpu10I	CCTNAGC	1 cut(s)	888
Bpu1102I	GCTNAGC	1 cut(s)	375
BpuEI	CTTGAG	2 cut(s)	506, 1691
BpuMI	CCSGG	1 cut(s)	25
BsaAI	YACGTR	1 cut(s)	946
BsaBI	GATNNNNATC	1 cut(s)	511
BsaHI	GRCGYC	1 cut(s)	146
BsaI	GGTCTC	2 cut(s)	1167, 1583
BsaWI	WCCGGW	2 cut(s)	208, 443
Bsc4I	CCNNNNNNNGG	4 cut(s)	48, 134, 535, 1754
Bse118I	RCCGGY	2 cut(s)	208, 424
Bse1I	ACTGG	7 cut(s)	135, 529, 986, 1007, 1128, 1245, 1456
Bse8I	GATNNNNATC	1 cut(s)	511
BseAI	TCCGGA	1 cut(s)	443
BseBI	CCWGG	7 cut(s)	49, 225, 274, 1095, 1330, 1389, 1594
BseGI	GGATG	9 cut(s)	121, 139, 218, 254, 627, 631, 700, 1189, 1432
BseJI	GATNNNNATC	1 cut(s)	511
BseLI	CCNNNNNNNGG	4 cut(s)	48, 134, 535, 1754
BseNI	ACTGG	7 cut(s)	135, 529, 986, 1007, 1128, 1245, 1456
BseSI	GKGCMC	4 cut(s)	93, 484, 826, 1787
BseXI	GCAGC	4 cut(s)	241, 934, 1567, 1670
BseYI	CCCAGC	1 cut(s)	187
BsgI	GTGCAG	2 cut(s)	263, 941
Bsh1236I	CGCG	3 cut(s)	151, 314, 1755
Bsh1285I	CGRYCG	1 cut(s)	1723
BshNI	GGYRCC	2 cut(s)	145, 259
BshTI	ACCGGT	1 cut(s)	208
BsiEI	CGRYCG	1 cut(s)	1723
BsiHKAI	GWGCWC	4 cut(s)	93, 376, 484, 1228
BsiSI	CCGG	5 cut(s)	25, 154, 209, 425, 444
BslFI	GGGAC	2 cut(s)	253, 762
BslI	CCNNNNNNNGG	4 cut(s)	48, 134, 535, 1754
BsmAI	GTCTC	5 cut(s)	42, 1167, 1538, 1583, 1705
BsmBI	CGTCTC	1 cut(s)	42
BsmFI	GGGAC	2 cut(s)	253, 762
BsmI	GAATGC	4 cut(s)	174, 388, 1213, 1300
Bso31I	GGTCTC	2 cut(s)	1167, 1583
Bsp120I	GGGCCC	2 cut(s)	822, 1783
Bsp1286I	GDGCHC	7 cut(s)	93, 376, 484, 782, 826, 1228, 1787
Bsp13I	TCCGGA	1 cut(s)	443
Bsp143I	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
Bsp1720I	GCTNAGC	1 cut(s)	375
BspEI	TCCGGA	1 cut(s)	443
BspFNI	CGCG	3 cut(s)	151, 314, 1755
BspLI	GGNNCC	9 cut(s)	147, 186, 261, 750, 751, 779, 824, 825, 1785
BspMI	ACCTGC	1 cut(s)	892
BspPI	GGATC	1 cut(s)	1700
BspT107I	GGYRCC	2 cut(s)	145, 259
BspTI	CTTAAG	1 cut(s)	1247
BspTNI	GGTCTC	2 cut(s)	1167, 1583
BsrBI	CCGCTC	1 cut(s)	640
BsrFI	RCCGGY	2 cut(s)	208, 424
BsrI	ACTGG	7 cut(s)	135, 529, 986, 1007, 1128, 1245, 1456
BssAI	RCCGGY	2 cut(s)	208, 424
BssMI	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
BssNI	GRCGYC	1 cut(s)	146
BssSI	CACGAG	1 cut(s)	1233
BssT1I	CCWWGG	3 cut(s)	660, 1349, 1793
Bst2BI	CACGAG	1 cut(s)	1233
Bst2UI	CCWGG	7 cut(s)	49, 225, 274, 1095, 1330, 1389, 1594
Bst4CI	ACNGT	6 cut(s)	20, 862, 1057, 1161, 1566, 1776
Bst6I	CTCTTC	1 cut(s)	1499
BstACI	GRCGYC	1 cut(s)	146
BstAFI	CTTAAG	1 cut(s)	1247
BstBAI	YACGTR	1 cut(s)	946
BstC8I	GCNNGC	8 cut(s)	125, 242, 1105, 1228, 1639, 1643, 1677, 1683
BstDSI	CCRYGG	3 cut(s)	1128, 1157, 1753
BstF5I	GGATG	9 cut(s)	121, 139, 218, 254, 627, 631, 700, 1189, 1432
BstFNI	CGCG	3 cut(s)	151, 314, 1755
BstH2I	RGCGCY	2 cut(s)	149, 955
BstHHI	GCGC	4 cut(s)	148, 153, 954, 1681
BstKTI	GATC	7 cut(s)	16, 1018, 1278, 1444, 1697, 1708, 1723
BstMAI	GTCTC	5 cut(s)	42, 1167, 1538, 1583, 1705
BstMBI	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
BstMCI	CGRYCG	1 cut(s)	1723
BstMWI	GCNNNNNNNGC	7 cut(s)	97, 171, 517, 563, 662, 1609, 1664
BstNI	CCWGG	7 cut(s)	49, 225, 274, 1095, 1330, 1389, 1594
BstNSI	RCATGY	1 cut(s)	1397
BstSCI	CCNGG	8 cut(s)	23, 47, 223, 272, 1093, 1328, 1387, 1592
BstSLI	GKGCMC	4 cut(s)	93, 484, 826, 1787
BstUI	CGCG	3 cut(s)	151, 314, 1755
BstV1I	GCAGC	4 cut(s)	241, 934, 1567, 1670
BstV2I	GAAGAC	1 cut(s)	489
BstX2I	RGATCY	1 cut(s)	1705
BstXI	CCANNNNNNTGG	1 cut(s)	1593
BstYI	RGATCY	1 cut(s)	1705
BtgI	CCRYGG	3 cut(s)	1128, 1157, 1753
BtgZI	GCGATG	1 cut(s)	180
BtsCI	GGATG	9 cut(s)	121, 139, 218, 254, 627, 631, 700, 1189, 1432
BtsIMutI	CAGTG	2 cut(s)	128, 993
BveI	ACCTGC	1 cut(s)	892
Cac8I	GCNNGC	8 cut(s)	125, 242, 1105, 1228, 1639, 1643, 1677, 1683
CaiI	CAGNNNCTG	1 cut(s)	1109
CfoI	GCGC	4 cut(s)	148, 153, 954, 1681
Cfr10I	RCCGGY	2 cut(s)	208, 424
Cfr13I	GGNCC	9 cut(s)	9, 184, 441, 749, 822, 823, 991, 1783, 1784
Cfr42I	CCGCGG	1 cut(s)	1756
CseI	GACGC	3 cut(s)	320, 617, 1124
CsiI	ACCWGGT	1 cut(s)	1093
Csp6I	GTAC	1 cut(s)	1030
CspAI	ACCGGT	1 cut(s)	208
CspCI	CAANNNNNGTGG	2 cut(s)	969, 1004
CviAII	CATG	7 cut(s)	387, 438, 473, 1019, 1322, 1343, 1394
CviQI	GTAC	1 cut(s)	1030
DinI	GGCGCC	1 cut(s)	147
DpnI	GATC	7 cut(s)	15, 1017, 1277, 1443, 1696, 1707, 1722
DpnII	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
DraI	TTTAAA	1 cut(s)	1152
DraIII	CACNNNGTG	1 cut(s)	88
EaeI	YGGCCR	3 cut(s)	26, 1125, 1732
Eam1104I	CTCTTC	1 cut(s)	1499
EarI	CTCTTC	1 cut(s)	1499
EciI	GGCGGA	2 cut(s)	115, 1612
Eco130I	CCWWGG	3 cut(s)	660, 1349, 1793
Eco147I	AGGCCT	1 cut(s)	1798
Eco24I	GRGCYC	3 cut(s)	782, 826, 1787
Eco31I	GGTCTC	2 cut(s)	1167, 1583
Eco47I	GGWCC	3 cut(s)	441, 749, 991
Eco57I	CTGAAG	3 cut(s)	921, 936, 1647
EcoO109I	RGGNCCY	3 cut(s)	749, 822, 823
EcoRI	GAATTC	2 cut(s)	1081, 1743
EcoRII	CCWGG	7 cut(s)	47, 223, 272, 1093, 1328, 1387, 1592
EcoT14I	CCWWGG	3 cut(s)	660, 1349, 1793
EcoT22I	ATGCAT	1 cut(s)	388
EcoT38I	GRGCYC	3 cut(s)	782, 826, 1787
EgeI	GGCGCC	1 cut(s)	147
EheI	GGCGCC	1 cut(s)	147
ErhI	CCWWGG	3 cut(s)	660, 1349, 1793
Esp3I	CGTCTC	1 cut(s)	42
FaeI	CATG	7 cut(s)	390, 441, 476, 1022, 1325, 1346, 1397
FaqI	GGGAC	2 cut(s)	253, 762
FatI	CATG	7 cut(s)	386, 437, 472, 1018, 1321, 1342, 1393
FauI	CCCGC	2 cut(s)	49, 403
FbaI	TGATCA	3 cut(s)	1015, 1275, 1441
FblI	GTMKAC	2 cut(s)	583, 685
FokI	GGATG	9 cut(s)	128, 146, 205, 261, 634, 638, 707, 1196, 1419
FriOI	GRGCYC	3 cut(s)	782, 826, 1787
FspBI	CTAG	6 cut(s)	77, 477, 558, 744, 819, 1749
FspI	TGCGCA	1 cut(s)	1680
GlaI	GCGC	4 cut(s)	147, 152, 953, 1680
GsaI	CCCAGC	1 cut(s)	191
GsuI	CTGGAG	1 cut(s)	990
HaeII	RGCGCY	2 cut(s)	149, 955
HapII	CCGG	5 cut(s)	25, 154, 209, 425, 444
HgaI	GACGC	3 cut(s)	320, 617, 1124
HhaI	GCGC	4 cut(s)	148, 153, 954, 1681
Hin1I	GRCGYC	1 cut(s)	146
Hin1II	CATG	7 cut(s)	390, 441, 476, 1022, 1325, 1346, 1397
Hin6I	GCGC	4 cut(s)	146, 151, 952, 1679
HinP1I	GCGC	4 cut(s)	146, 151, 952, 1679
HincII	GTYRAC	1 cut(s)	1264
HindII	GTYRAC	1 cut(s)	1264
HinfI	GANTC	3 cut(s)	67, 703, 1429
HpaII	CCGG	5 cut(s)	25, 154, 209, 425, 444
HphI	GGTGA	4 cut(s)	8, 295, 1025, 1575
Hpy166II	GTNNAC	6 cut(s)	91, 482, 584, 686, 991, 1264
Hpy188III	TCNNGA	5 cut(s)	444, 1172, 1628, 1670, 1692
Hpy8I	GTNNAC	6 cut(s)	91, 482, 584, 686, 991, 1264
HpyAV	CCTTC	4 cut(s)	394, 484, 531, 787
HpyCH4III	ACNGT	6 cut(s)	20, 862, 1057, 1161, 1566, 1776
HpyCH4IV	ACGT	2 cut(s)	35, 945
HpyF10VI	GCNNNNNNNGC	7 cut(s)	97, 171, 517, 563, 662, 1609, 1664
HpySE526I	ACGT	2 cut(s)	35, 945
Hsp92I	GRCGYC	1 cut(s)	146
Hsp92II	CATG	7 cut(s)	390, 441, 476, 1022, 1325, 1346, 1397
HspAI	GCGC	4 cut(s)	146, 151, 952, 1679
KasI	GGCGCC	1 cut(s)	145
KflI	GGGWCCC	1 cut(s)	749
Kpn2I	TCCGGA	1 cut(s)	443
Ksp22I	TGATCA	3 cut(s)	1015, 1275, 1441
KspI	CCGCGG	1 cut(s)	1756
Kzo9I	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
LmnI	GCTCC	4 cut(s)	777, 1009, 1132, 1252
Lsp1109I	GCAGC	4 cut(s)	241, 934, 1567, 1670
LweI	GCATC	5 cut(s)	227, 643, 1174, 1327, 1654
MabI	ACCWGGT	1 cut(s)	1093
MaeI	CTAG	6 cut(s)	77, 477, 558, 744, 819, 1749
MaeII	ACGT	2 cut(s)	35, 945
MaeIII	GTNAC	7 cut(s)	308, 415, 605, 798, 869, 966, 1811
MalI	GATC	7 cut(s)	15, 1017, 1277, 1443, 1696, 1707, 1722
MbiI	CCGCTC	1 cut(s)	640
MboI	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
MboII	GAAGA	4 cut(s)	489, 927, 1516, 1543
MfeI	CAATTG	2 cut(s)	1178, 1188
MflI	RGATCY	1 cut(s)	1705
MhlI	GDGCHC	7 cut(s)	93, 376, 484, 782, 826, 1228, 1787
MlsI	TGGCCA	1 cut(s)	1734
MluNI	TGGCCA	1 cut(s)	1734
Mly113I	GGCGCC	1 cut(s)	146
MlyI	GAGTC	1 cut(s)	61
Mox20I	TGGCCA	1 cut(s)	1734
Mph1103I	ATGCAT	1 cut(s)	388
MroI	TCCGGA	1 cut(s)	443
MroXI	GAANNNNTTC	1 cut(s)	1242
MscI	TGGCCA	1 cut(s)	1734
MseI	TTAA	5 cut(s)	324, 962, 1151, 1248, 1715
MslI	CAYNNNNRTG	4 cut(s)	57, 179, 477, 591
Msp20I	TGGCCA	1 cut(s)	1734
MspA1I	CMGCKG	2 cut(s)	566, 1755
MspCI	CTTAAG	1 cut(s)	1247
MspI	CCGG	5 cut(s)	25, 154, 209, 425, 444
MspR9I	CCNGG	8 cut(s)	25, 49, 225, 274, 1095, 1330, 1389, 1594
MteI	GCGCNGCGC	1 cut(s)	149
MunI	CAATTG	2 cut(s)	1178, 1188
Mva1269I	GAATGC	4 cut(s)	174, 388, 1213, 1300
MvaI	CCWGG	7 cut(s)	49, 225, 274, 1095, 1330, 1389, 1594
MvnI	CGCG	3 cut(s)	151, 314, 1755
MwoI	GCNNNNNNNGC	7 cut(s)	97, 171, 517, 563, 662, 1609, 1664
NarI	GGCGCC	1 cut(s)	146
NciI	CCSGG	1 cut(s)	25
NdeII	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
NlaIII	CATG	7 cut(s)	390, 441, 476, 1022, 1325, 1346, 1397
NlaIV	GGNNCC	9 cut(s)	147, 186, 261, 750, 751, 779, 824, 825, 1785
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	2 cut(s)	308, 605
NsbI	TGCGCA	1 cut(s)	1680
NsiI	ATGCAT	1 cut(s)	388
NspI	RCATGY	1 cut(s)	1397
PasI	CCCWGGG	2 cut(s)	224, 273
PceI	AGGCCT	1 cut(s)	1798
PctI	GAATGC	4 cut(s)	174, 388, 1213, 1300
PdmI	GAANNNNTTC	1 cut(s)	1242
PfeI	GAWTC	2 cut(s)	703, 1429
PflMI	CCANNNNNTGG	1 cut(s)	134
PinAI	ACCGGT	1 cut(s)	208
Ple19I	CGATCG	1 cut(s)	1723
PleI	GAGTC	1 cut(s)	61
PluTI	GGCGCC	1 cut(s)	149
PpsI	GAGTC	1 cut(s)	61
Ppu21I	YACGTR	1 cut(s)	946
PpuMI	RGGWCCY	1 cut(s)	749
PsiI	TTATAA	1 cut(s)	161
Psp5II	RGGWCCY	1 cut(s)	749
Psp6I	CCWGG	7 cut(s)	47, 223, 272, 1093, 1328, 1387, 1592
PspFI	CCCAGC	1 cut(s)	187
PspGI	CCWGG	7 cut(s)	47, 223, 272, 1093, 1328, 1387, 1592
PspN4I	GGNNCC	9 cut(s)	147, 186, 261, 750, 751, 779, 824, 825, 1785
PspOMI	GGGCCC	2 cut(s)	822, 1783
PspPI	GGNCC	9 cut(s)	9, 184, 441, 749, 822, 823, 991, 1783, 1784
PspPPI	RGGWCCY	1 cut(s)	749
PstNI	CAGNNNCTG	1 cut(s)	1109
PsuI	RGATCY	1 cut(s)	1705
PvuI	CGATCG	1 cut(s)	1723
PvuII	CAGCTG	1 cut(s)	566
RsaI	GTAC	1 cut(s)	1031
RsaNI	GTAC	1 cut(s)	1030
RseI	CAYNNNNRTG	4 cut(s)	57, 179, 477, 591
SacII	CCGCGG	1 cut(s)	1756
SaqAI	TTAA	5 cut(s)	324, 962, 1151, 1248, 1715
Sau3AI	GATC	7 cut(s)	13, 1015, 1275, 1441, 1694, 1705, 1720
Sau96I	GGNCC	9 cut(s)	9, 184, 441, 749, 822, 823, 991, 1783, 1784
SchI	GAGTC	1 cut(s)	61
ScrFI	CCNGG	8 cut(s)	25, 49, 225, 274, 1095, 1330, 1389, 1594
SduI	GDGCHC	7 cut(s)	93, 376, 484, 782, 826, 1228, 1787
SexAI	ACCWGGT	1 cut(s)	1093
SfaNI	GCATC	5 cut(s)	227, 643, 1174, 1327, 1654
SfoI	GGCGCC	1 cut(s)	147
Sfr303I	CCGCGG	1 cut(s)	1756
SgrBI	CCGCGG	1 cut(s)	1756
SinI	GGWCC	3 cut(s)	441, 749, 991
SmiMI	CAYNNNNRTG	4 cut(s)	57, 179, 477, 591
SmlI	CTYRAG	3 cut(s)	485, 1247, 1670
SmoI	CTYRAG	3 cut(s)	485, 1247, 1670
SseBI	AGGCCT	1 cut(s)	1798
SspDI	GGCGCC	1 cut(s)	145
SspMI	CTAG	6 cut(s)	77, 477, 558, 744, 819, 1749
StuI	AGGCCT	1 cut(s)	1798
StyD4I	CCNGG	8 cut(s)	23, 47, 223, 272, 1093, 1328, 1387, 1592
StyI	CCWWGG	3 cut(s)	660, 1349, 1793
TaaI	ACNGT	6 cut(s)	20, 862, 1057, 1161, 1566, 1776
TaiI	ACGT	2 cut(s)	38, 948
TaqI	TCGA	1 cut(s)	1723
TauI	GCSGC	6 cut(s)	10, 151, 260, 643, 1561, 1755
TfiI	GAWTC	2 cut(s)	703, 1429
Tru1I	TTAA	5 cut(s)	324, 962, 1151, 1248, 1715
Tru9I	TTAA	5 cut(s)	324, 962, 1151, 1248, 1715
TscAI	CASTG	2 cut(s)	135, 993
TseFI	GTSAC	2 cut(s)	308, 605
TseI	GCWGC	4 cut(s)	254, 922, 1555, 1658
Tsp45I	GTSAC	2 cut(s)	308, 605
TspDTI	ATGAA	3 cut(s)	132, 1077, 1094
TspGWI	ACGGA	2 cut(s)	60, 1665
TspRI	CASTG	2 cut(s)	135, 993
Van91I	CCANNNNNTGG	1 cut(s)	134
Vha464I	CTTAAG	1 cut(s)	1247
VneI	GTGCAC	2 cut(s)	89, 480
VpaK11BI	GGWCC	3 cut(s)	441, 749, 991
XapI	RAATTY	5 cut(s)	1081, 1147, 1460, 1725, 1743
XceI	RCATGY	1 cut(s)	1397
XmiI	GTMKAC	2 cut(s)	583, 685
XmnI	GAANNNNTTC	1 cut(s)	1242
XspI	CTAG	6 cut(s)	77, 477, 558, 744, 819, 1749
Zsp2I	ATGCAT	1 cut(s)	388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.