Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007473

Physical Location & Seq

Genomic Coordinates Forward (+)

3060794 .. 3064300

Gene Structure 3507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG044300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGTCGAAGAAGAAAGTGAGCGGAAACACGATGACGCTCAAGGACTTTCACGGCGGTTCTATTCCCTCCGATCTCCCTCTCCCTTCTGCTCCCGGTGTAATTGTTAGGGCTACGGATCGGCCCGGTTACGACCGGCCGGCCGCTTGGGGAAACCCGATGGGACGGCCCGATCACCGTTCCCGGCCACATACGTCTCCAGCCACCAGGCACTTTGATGACAAGACTCCGTTTCTAGCGCACTCTGTCCACATTGGGCGGAACTTTGATGAGGATGAACGCAAGCCACTGGATGGTGTGTCGGTGCCGCGCCGGATTATAAGCGATGACAGCATTCGGGTGGCCCCAGCCCTTGCCGAGCCGAAACCGGTGTTTGCATCCCCTGGGGGATTATCAGGCGTGCAGGGATGGGCTGCGCAGTCCCCCAGGGAAGCGGTGAGTTCTTACTCGGAGAGGGTTAGTGACGCGGTGGGGGTTAATTCTCAGAGTGTAAGTGGTAATGGTGGGCGTGGCGGTGGGAGTGGTGCTCAGCCGAATGCGTGGGCAGTTAGGAAGGAGATGGCGGGTGTTACTGAGCCGGTGCAATCTGCATGGTCCGGACAGAGTGCTGTTGTGAAGTTGGCTCATGCTAGTGCACTTGAGAAGGTGTCTTCTGGTAGATGGCAATCAAAGCCTTCAATCCAGTATCAGGCGAATAACATCGAGGTTGCTAGGTCAGCTGAAACAGAGGGTGGTGTACATTCCAAGGGTTATGGTAGTGACGCTTACAAGAGGATGGATGTGATGGTTGAGCGGCAAAACTATGATGCCACCTTGGCAAGACAAATTGAAAGAGGTCTACAAATGGATGATGGGATTCAGAATGTTAGGAAAGAGTTGCCGGATTATGAGAGGGCTAGGGGACCCATCATTTCAGAAGTAAAAGAAAGGAGCCCAATGGTTCGGAAGGAGTTGCCTGATTATGAGAGGGCTAGGGCCCCCATCATTTCAGAAGTAAGAGAAAGGAAGCCAACTGTGTATAGTAACAGGGTTCAACCTGCTCAGGCTGATGCCAAATATGGTCAGACTGAAGTGCAGCCCTTTACTTCTTCAGAACACGTAGACCGCCCTAAGTTAAAGTTACTTCCAAGAACAAGGCCAGTGGACCATTTGGAAGCTCCAGTTGGTGATCATGCACAGGAGTACCAGCACCCTGTTTATGTTGAAACTGTCAATGAAGTGTATGGAAATATGAATTCTACAAAACCTGGTTCAGCAGGCTCTGAGAGTGGGAAACTGGCCGTGGAGCGTCCAAAATTGAATTTAAAGCCCCGGTCTCAGCCTCTTGAACAATTGGATGCAATTGCCGAAAGAGAGAGGAATGGGTTATTTGGTGGTGCTCGCCCACGAGAACTGGTTCTTAAGGAGCGAGGGGTTGACGATGTTGTGATCAACAATGCTGACATAGTTCAGCATTCTGACAAGGTTGAGCATCATGTTGCCAGGGTTGAAAATCATGTTCCAAGGGCTGAACATCTCTCTCCAAAGCCTGATAGAGTTCCTGGGCATTCCAATCCTACTCGCCACCCTGATAAAGCTGAGAATCATCCTTTTGATCAGAGAACTGGAAAGAAATTTGATAGGAGGGATAATCAAGTTGAGAGAGTAGATATGCAGAGGAGGAATTGGCGTAATGATGGGAGGAAGAACAACAGAGAGACTGATAGGCAGCCGCAACAGTCAGAGAGGCCACCATCACCAGAGACCTGGCGGAAGCCTGAACAGCCAAAACCATCATCTCCTGATGGTGCTGGCCTGCATCACGGAAAAGCAGCTTCAGCTCTTGAGCTTGCGCAAGCATTTTCCAGATCAGTCTCAGATCCAAAATTAAACGATCGAATTTCTGGCCAAAGGGGAATTCCTAGCCGCGGTCAAATACCTTTTTCACGGTTGATGGGCCCAAGTCCAAGGCCTCAGATAAATGGTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

eIF-4B

Protein Analysis

655

Amino Acids

72.46

Weight (kDa)

9.59

Isoelectric Point (pI)

44.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007473)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11480 AT1G11480
fragaria_vesca	FvH4_3g03030 FvH4_3g03030 FvH4_3g03030
malus_domestica	MD05G1335400.v1.1 MD10G1310800.v1.1
prunus_persica	Prupe.4G030000_v2.0.a1 Prupe.4G030000_v2.0.a1 Prupe.4G030000_v2.0.a1
pyrus_communis	pycom05g30680 pycom10g26180
rosa_chinensis	RchiOBHm_Chr5g0004671 RchiOBHm_Chr5g0004681
rosa_laevigata	RLG00000031251
rosa_multiflora	Rmu_co8318215.1_g000001 Rmu_sc0002210.1_g000003
rosa_roxburghii	Rroxscaffold_1G00070880
rosa_rugosa	Rorug04G0413200
rosa_samantha	Rh5AG040800 Rh5BG040500 Rh5BG040700 Rh5CG044300 Rh5DG040500
rosa_wichuraiana	Rw5G003930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	317
Acc16I	TGCGCA	2 cut(s)	414, 1830
Acc36I	ACCTGC	1 cut(s)	1042
AccB1I	GGYRCC	1 cut(s)	301
AccB7I	CCANNNNNTGG	1 cut(s)	290
AccBSI	CCGCTC	2 cut(s)	21, 790
AccI	GTMKAC	2 cut(s)	835, 1098
AccII	CGCG	3 cut(s)	307, 464, 1905
AccIII	TCCGGA	1 cut(s)	593
AclWI	GGATC	2 cut(s)	123, 1850
AcoI	YGGCCR	5 cut(s)	134, 138, 182, 1275, 1882
AcsI	RAATTY	5 cut(s)	1231, 1297, 1610, 1875, 1893
AcuI	CTGAAG	3 cut(s)	1071, 1086, 1797
AfaI	GTAC	2 cut(s)	735, 1181
AfiI	CCNNNNNNNGG	3 cut(s)	290, 685, 1904
AflII	CTTAAG	1 cut(s)	1397
AflIII	ACRYGT	1 cut(s)	1093
AgeI	ACCGGT	1 cut(s)	364
AgsI	TTSAA	7 cut(s)	675, 827, 1031, 1202, 1297, 1325, 1487
AjnI	CCWGG	7 cut(s)	203, 379, 422, 1243, 1478, 1537, 1742
AjuI	GAANNNNNNNTTGG	4 cut(s)	1143, 1175, 1878, 1910
AluBI	AGCT	6 cut(s)	716, 1154, 1574, 1811, 1817, 1825
AluI	AGCT	6 cut(s)	716, 1154, 1574, 1811, 1817, 1825
Alw21I	GWGCWC	3 cut(s)	526, 634, 1378
Alw26I	GTCTC	5 cut(s)	198, 1317, 1688, 1733, 1855
Alw44I	GTGCAC	1 cut(s)	630
AlwI	GGATC	2 cut(s)	123, 1850
AlwNI	CAGNNNCTG	1 cut(s)	1259
Aor13HI	TCCGGA	1 cut(s)	593
ApaI	GGGCCC	2 cut(s)	976, 1937
ApaLI	GTGCAC	1 cut(s)	630
ApeKI	GCWGC	4 cut(s)	410, 1072, 1705, 1808
ApoI	RAATTY	5 cut(s)	1231, 1297, 1610, 1875, 1893
AsiGI	ACCGGT	1 cut(s)	364
Asp700I	GAANNNNTTC	1 cut(s)	1392
AspLEI	GCGC	4 cut(s)	238, 309, 415, 1831
AsuC2I	CCSGG	4 cut(s)	93, 123, 181, 1309
AsuHPI	GGTGA	4 cut(s)	164, 445, 1175, 1725
AvaII	GGWCC	3 cut(s)	591, 899, 1141
BaeGI	GKGCMC	3 cut(s)	634, 976, 1937
BaeI	ACNNNNGTAYC	2 cut(s)	1163, 1196
BalI	TGGCCA	1 cut(s)	1884
BanI	GGYRCC	1 cut(s)	301
BanII	GRGCYC	3 cut(s)	932, 976, 1937
BauI	CACGAG	1 cut(s)	1383
BbsI	GAAGAC	1 cut(s)	639
Bbv12I	GWGCWC	3 cut(s)	526, 634, 1378
BbvI	GCAGC	4 cut(s)	397, 1084, 1717, 1820
BceAI	ACGGC	3 cut(s)	67, 179, 1262
BciT130I	CCWGG	7 cut(s)	205, 381, 424, 1245, 1480, 1539, 1744
BclI	TGATCA	3 cut(s)	1165, 1425, 1591
BcnI	CCSGG	4 cut(s)	93, 123, 181, 1309
BcoDI	GTCTC	5 cut(s)	198, 1317, 1688, 1733, 1855
BfaI	CTAG	6 cut(s)	233, 627, 708, 894, 969, 1899
BfrI	CTTAAG	1 cut(s)	1397
BfuAI	ACCTGC	1 cut(s)	1042
BglI	GCCNNNNNGGC	1 cut(s)	812
BisI	GCNGC	9 cut(s)	141, 305, 411, 791, 1073, 1706, 1709, 1809, 1903
BlpI	GCTNAGC	1 cut(s)	525
BlsI	GCNGC	9 cut(s)	142, 306, 412, 792, 1074, 1707, 1710, 1810, 1904
Bme18I	GGWCC	3 cut(s)	591, 899, 1141
BmiI	GGNNCC	8 cut(s)	303, 342, 900, 901, 929, 974, 975, 1935
BmsI	GCATC	6 cut(s)	383, 793, 1036, 1324, 1477, 1804
BpiI	GAAGAC	1 cut(s)	639
BplI	GAGNNNNNCTC	2 cut(s)	508, 540
BpmI	CTGGAG	2 cut(s)	180, 1140
Bpu10I	CCTNAGC	1 cut(s)	1038
Bpu1102I	GCTNAGC	1 cut(s)	525
BpuEI	CTTGAG	3 cut(s)	23, 656, 1841
BpuMI	CCSGG	4 cut(s)	93, 123, 181, 1309
BsaAI	YACGTR	1 cut(s)	1096
BsaBI	GATNNNNATC	1 cut(s)	661
BsaI	GGTCTC	2 cut(s)	1317, 1733
BsaWI	WCCGGW	2 cut(s)	364, 593
Bsc4I	CCNNNNNNNGG	3 cut(s)	290, 685, 1904
Bse118I	RCCGGY	4 cut(s)	132, 136, 364, 574
Bse1I	ACTGG	7 cut(s)	291, 679, 1136, 1157, 1278, 1395, 1606
Bse8I	GATNNNNATC	1 cut(s)	661
BseAI	TCCGGA	1 cut(s)	593
BseBI	CCWGG	7 cut(s)	205, 381, 424, 1245, 1480, 1539, 1744
BseGI	GGATG	9 cut(s)	277, 295, 374, 410, 777, 781, 850, 1339, 1582
BseJI	GATNNNNATC	1 cut(s)	661
BseLI	CCNNNNNNNGG	3 cut(s)	290, 685, 1904
BseMII	CTCAG	9 cut(s)	494, 539, 561, 1052, 1251, 1328, 1566, 1866, 1964
BseNI	ACTGG	7 cut(s)	291, 679, 1136, 1157, 1278, 1395, 1606
BseRI	GAGGAG	1 cut(s)	1669
BseSI	GKGCMC	3 cut(s)	634, 976, 1937
BseX3I	CGGCCG	2 cut(s)	134, 138
BseXI	GCAGC	4 cut(s)	397, 1084, 1717, 1820
BseYI	CCCAGC	1 cut(s)	343
BsgI	GTGCAG	2 cut(s)	419, 1091
Bsh1236I	CGCG	3 cut(s)	307, 464, 1905
Bsh1285I	CGRYCG	4 cut(s)	133, 137, 141, 1873
BshNI	GGYRCC	1 cut(s)	301
BshTI	ACCGGT	1 cut(s)	364
BsiEI	CGRYCG	4 cut(s)	133, 137, 141, 1873
BsiHKAI	GWGCWC	3 cut(s)	526, 634, 1378
BslFI	GGGAC	3 cut(s)	174, 403, 912
BslI	CCNNNNNNNGG	3 cut(s)	290, 685, 1904
BsmAI	GTCTC	5 cut(s)	198, 1317, 1688, 1733, 1855
BsmBI	CGTCTC	1 cut(s)	198
BsmFI	GGGAC	3 cut(s)	174, 403, 912
BsmI	GAATGC	4 cut(s)	330, 538, 1450, 1543
Bso31I	GGTCTC	2 cut(s)	1317, 1733
Bsp120I	GGGCCC	2 cut(s)	972, 1933
Bsp1286I	GDGCHC	6 cut(s)	526, 634, 932, 976, 1378, 1937
Bsp13I	TCCGGA	1 cut(s)	593
Bsp1407I	TGTACA	1 cut(s)	733
Bsp143I	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
Bsp1720I	GCTNAGC	1 cut(s)	525
BspCNI	CTCAG	9 cut(s)	493, 538, 562, 1051, 1252, 1327, 1567, 1865, 1963
BspEI	TCCGGA	1 cut(s)	593
BspFNI	CGCG	3 cut(s)	307, 464, 1905
BspLI	GGNNCC	8 cut(s)	303, 342, 900, 901, 929, 974, 975, 1935
BspMI	ACCTGC	1 cut(s)	1042
BspPI	GGATC	2 cut(s)	123, 1850
BspT107I	GGYRCC	1 cut(s)	301
BspTI	CTTAAG	1 cut(s)	1397
BspTNI	GGTCTC	2 cut(s)	1317, 1733
BsrBI	CCGCTC	2 cut(s)	21, 790
BsrFI	RCCGGY	4 cut(s)	132, 136, 364, 574
BsrGI	TGTACA	1 cut(s)	733
BsrI	ACTGG	7 cut(s)	291, 679, 1136, 1157, 1278, 1395, 1606
BssAI	RCCGGY	4 cut(s)	132, 136, 364, 574
BssMI	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
BssSI	CACGAG	1 cut(s)	1383
BssT1I	CCWWGG	4 cut(s)	741, 810, 1499, 1943
Bst2BI	CACGAG	1 cut(s)	1383
Bst2UI	CCWGG	7 cut(s)	205, 381, 424, 1245, 1480, 1539, 1744
Bst4CI	ACNGT	5 cut(s)	176, 1012, 1207, 1716, 1926
BstAFI	CTTAAG	1 cut(s)	1397
BstAUI	TGTACA	1 cut(s)	733
BstBAI	YACGTR	1 cut(s)	1096
BstC8I	GCNNGC	9 cut(s)	138, 281, 398, 1255, 1378, 1789, 1793, 1827, 1833
BstDSI	CCRYGG	2 cut(s)	1278, 1903
BstF5I	GGATG	9 cut(s)	277, 295, 374, 410, 777, 781, 850, 1339, 1582
BstFNI	CGCG	3 cut(s)	307, 464, 1905
BstHHI	GCGC	4 cut(s)	238, 309, 415, 1831
BstKTI	GATC	9 cut(s)	73, 118, 172, 1168, 1428, 1594, 1847, 1858, 1873
BstMAI	GTCTC	5 cut(s)	198, 1317, 1688, 1733, 1855
BstMBI	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
BstMCI	CGRYCG	4 cut(s)	133, 137, 141, 1873
BstMWI	GCNNNNNNNGC	6 cut(s)	327, 667, 713, 812, 1759, 1814
BstNI	CCWGG	7 cut(s)	205, 381, 424, 1245, 1480, 1539, 1744
BstSLI	GKGCMC	3 cut(s)	634, 976, 1937
BstUI	CGCG	3 cut(s)	307, 464, 1905
BstV1I	GCAGC	4 cut(s)	397, 1084, 1717, 1820
BstV2I	GAAGAC	1 cut(s)	639
BstX2I	RGATCY	1 cut(s)	1855
BstXI	CCANNNNNNTGG	1 cut(s)	1743
BstYI	RGATCY	1 cut(s)	1855
BstZI	CGGCCG	2 cut(s)	134, 138
BtgI	CCRYGG	2 cut(s)	1278, 1903
BtgZI	GCGATG	1 cut(s)	336
BtsCI	GGATG	9 cut(s)	277, 295, 374, 410, 777, 781, 850, 1339, 1582
BtsIMutI	CAGTG	2 cut(s)	284, 1143
BveI	ACCTGC	1 cut(s)	1042
Cac8I	GCNNGC	9 cut(s)	138, 281, 398, 1255, 1378, 1789, 1793, 1827, 1833
CaiI	CAGNNNCTG	1 cut(s)	1259
CfoI	GCGC	4 cut(s)	238, 309, 415, 1831
Cfr10I	RCCGGY	4 cut(s)	132, 136, 364, 574
Cfr42I	CCGCGG	1 cut(s)	1906
CseI	GACGC	4 cut(s)	43, 470, 767, 1274
CsiI	ACCWGGT	1 cut(s)	1243
Csp6I	GTAC	2 cut(s)	734, 1180
CspAI	ACCGGT	1 cut(s)	364
CspCI	CAANNNNNGTGG	2 cut(s)	1119, 1154
CviAII	CATG	5 cut(s)	588, 623, 1169, 1472, 1493
CviQI	GTAC	2 cut(s)	734, 1180
DpnI	GATC	9 cut(s)	72, 117, 171, 1167, 1427, 1593, 1846, 1857, 1872
DpnII	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
DraI	TTTAAA	1 cut(s)	1302
EaeI	YGGCCR	5 cut(s)	134, 138, 182, 1275, 1882
EagI	CGGCCG	2 cut(s)	134, 138
EciI	GGCGGA	2 cut(s)	271, 1762
EclXI	CGGCCG	2 cut(s)	134, 138
Eco130I	CCWWGG	4 cut(s)	741, 810, 1499, 1943
Eco147I	AGGCCT	1 cut(s)	1948
Eco24I	GRGCYC	3 cut(s)	932, 976, 1937
Eco31I	GGTCTC	2 cut(s)	1317, 1733
Eco47I	GGWCC	3 cut(s)	591, 899, 1141
Eco52I	CGGCCG	2 cut(s)	134, 138
Eco57I	CTGAAG	3 cut(s)	1071, 1086, 1797
EcoO109I	RGGNCCY	3 cut(s)	899, 972, 973
EcoRI	GAATTC	2 cut(s)	1231, 1893
EcoRII	CCWGG	7 cut(s)	203, 379, 422, 1243, 1478, 1537, 1742
EcoT14I	CCWWGG	4 cut(s)	741, 810, 1499, 1943
EcoT38I	GRGCYC	3 cut(s)	932, 976, 1937
ErhI	CCWWGG	4 cut(s)	741, 810, 1499, 1943
Esp3I	CGTCTC	1 cut(s)	198
FaeI	CATG	5 cut(s)	591, 626, 1172, 1475, 1496
FaqI	GGGAC	3 cut(s)	174, 403, 912
FatI	CATG	5 cut(s)	587, 622, 1168, 1471, 1492
FauI	CCCGC	1 cut(s)	553
FbaI	TGATCA	3 cut(s)	1165, 1425, 1591
FblI	GTMKAC	2 cut(s)	835, 1098
Fnu4HI	GCNGC	9 cut(s)	141, 305, 411, 791, 1073, 1706, 1709, 1809, 1903
FokI	GGATG	9 cut(s)	284, 302, 361, 417, 784, 788, 857, 1346, 1569
FriOI	GRGCYC	3 cut(s)	932, 976, 1937
FseI	GGCCGGCC	1 cut(s)	140
Fsp4HI	GCNGC	9 cut(s)	141, 305, 411, 791, 1073, 1706, 1709, 1809, 1903
FspBI	CTAG	6 cut(s)	233, 627, 708, 894, 969, 1899
FspI	TGCGCA	2 cut(s)	414, 1830
GlaI	GCGC	4 cut(s)	237, 308, 414, 1830
GluI	GCNGC	9 cut(s)	141, 305, 411, 791, 1073, 1706, 1709, 1809, 1903
GsaI	CCCAGC	1 cut(s)	347
GsuI	CTGGAG	2 cut(s)	180, 1140
HgaI	GACGC	4 cut(s)	43, 470, 767, 1274
HhaI	GCGC	4 cut(s)	238, 309, 415, 1831
Hin1II	CATG	5 cut(s)	591, 626, 1172, 1475, 1496
Hin6I	GCGC	4 cut(s)	236, 307, 413, 1829
HinP1I	GCGC	4 cut(s)	236, 307, 413, 1829
HincII	GTYRAC	1 cut(s)	1414
HindII	GTYRAC	1 cut(s)	1414
HinfI	GANTC	3 cut(s)	223, 853, 1579
HphI	GGTGA	4 cut(s)	164, 445, 1175, 1725
Hpy166II	GTNNAC	7 cut(s)	247, 632, 734, 836, 1099, 1141, 1414
Hpy188III	TCNNGA	5 cut(s)	594, 1322, 1778, 1820, 1842
Hpy8I	GTNNAC	7 cut(s)	247, 632, 734, 836, 1099, 1141, 1414
HpyAV	CCTTC	5 cut(s)	93, 544, 634, 681, 937
HpyCH4III	ACNGT	5 cut(s)	176, 1012, 1207, 1716, 1926
HpyCH4IV	ACGT	2 cut(s)	191, 1095
HpyF10VI	GCNNNNNNNGC	6 cut(s)	327, 667, 713, 812, 1759, 1814
HpySE526I	ACGT	2 cut(s)	191, 1095
Hsp92II	CATG	5 cut(s)	591, 626, 1172, 1475, 1496
HspAI	GCGC	4 cut(s)	236, 307, 413, 1829
KflI	GGGWCCC	1 cut(s)	899
Kpn2I	TCCGGA	1 cut(s)	593
KroI	GCCGGC	1 cut(s)	136
KroNI	GCCGGC	1 cut(s)	138
Ksp22I	TGATCA	3 cut(s)	1165, 1425, 1591
KspI	CCGCGG	1 cut(s)	1906
Kzo9I	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
LmnI	GCTCC	5 cut(s)	94, 927, 1159, 1282, 1402
Lsp1109I	GCAGC	4 cut(s)	397, 1084, 1717, 1820
LweI	GCATC	6 cut(s)	383, 793, 1036, 1324, 1477, 1804
MabI	ACCWGGT	1 cut(s)	1243
MaeI	CTAG	6 cut(s)	233, 627, 708, 894, 969, 1899
MaeII	ACGT	2 cut(s)	191, 1095
MaeIII	GTNAC	7 cut(s)	125, 458, 565, 755, 1019, 1116, 1961
MalI	GATC	9 cut(s)	72, 117, 171, 1167, 1427, 1593, 1846, 1857, 1872
MbiI	CCGCTC	2 cut(s)	21, 790
MboI	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
MboII	GAAGA	5 cut(s)	19, 22, 639, 1077, 1693
MfeI	CAATTG	2 cut(s)	1328, 1338
MflI	RGATCY	1 cut(s)	1855
MhlI	GDGCHC	6 cut(s)	526, 634, 932, 976, 1378, 1937
MlsI	TGGCCA	1 cut(s)	1884
MluNI	TGGCCA	1 cut(s)	1884
MlyI	GAGTC	1 cut(s)	217
Mox20I	TGGCCA	1 cut(s)	1884
MroI	TCCGGA	1 cut(s)	593
MroNI	GCCGGC	1 cut(s)	136
MroXI	GAANNNNTTC	1 cut(s)	1392
MscI	TGGCCA	1 cut(s)	1884
MseI	TTAA	5 cut(s)	474, 1112, 1301, 1398, 1865
MslI	CAYNNNNRTG	3 cut(s)	213, 335, 627
Msp20I	TGGCCA	1 cut(s)	1884
MspA1I	CMGCKG	2 cut(s)	716, 1905
MspCI	CTTAAG	1 cut(s)	1397
MunI	CAATTG	2 cut(s)	1328, 1338
Mva1269I	GAATGC	4 cut(s)	330, 538, 1450, 1543
MvaI	CCWGG	7 cut(s)	205, 381, 424, 1245, 1480, 1539, 1744
MvnI	CGCG	3 cut(s)	307, 464, 1905
MwoI	GCNNNNNNNGC	6 cut(s)	327, 667, 713, 812, 1759, 1814
NaeI	GCCGGC	1 cut(s)	138
NciI	CCSGG	4 cut(s)	93, 123, 181, 1309
NdeII	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
NgoMIV	GCCGGC	1 cut(s)	136
NlaIII	CATG	5 cut(s)	591, 626, 1172, 1475, 1496
NlaIV	GGNNCC	8 cut(s)	303, 342, 900, 901, 929, 974, 975, 1935
NmeAIII	GCCGAG	1 cut(s)	379
NmuCI	GTSAC	2 cut(s)	458, 755
NsbI	TGCGCA	2 cut(s)	414, 1830
PasI	CCCWGGG	2 cut(s)	380, 423
PceI	AGGCCT	1 cut(s)	1948
PctI	GAATGC	4 cut(s)	330, 538, 1450, 1543
PdiI	GCCGGC	1 cut(s)	138
PdmI	GAANNNNTTC	1 cut(s)	1392
PfeI	GAWTC	2 cut(s)	853, 1579
PflMI	CCANNNNNTGG	1 cut(s)	290
PinAI	ACCGGT	1 cut(s)	364
PkrI	GCNGC	9 cut(s)	142, 306, 412, 792, 1074, 1707, 1710, 1810, 1904
Ple19I	CGATCG	1 cut(s)	1873
PleI	GAGTC	1 cut(s)	217
PpsI	GAGTC	1 cut(s)	217
Ppu21I	YACGTR	1 cut(s)	1096
PpuMI	RGGWCCY	1 cut(s)	899
PsiI	TTATAA	1 cut(s)	317
Psp5II	RGGWCCY	1 cut(s)	899
Psp6I	CCWGG	7 cut(s)	203, 379, 422, 1243, 1478, 1537, 1742
PspFI	CCCAGC	1 cut(s)	343
PspGI	CCWGG	7 cut(s)	203, 379, 422, 1243, 1478, 1537, 1742
PspN4I	GGNNCC	8 cut(s)	303, 342, 900, 901, 929, 974, 975, 1935
PspOMI	GGGCCC	2 cut(s)	972, 1933
PspPPI	RGGWCCY	1 cut(s)	899
PstNI	CAGNNNCTG	1 cut(s)	1259
PsuI	RGATCY	1 cut(s)	1855
PvuI	CGATCG	1 cut(s)	1873
PvuII	CAGCTG	1 cut(s)	716
RigI	GGCCGGCC	1 cut(s)	140
RsaI	GTAC	2 cut(s)	735, 1181
RsaNI	GTAC	2 cut(s)	734, 1180
RseI	CAYNNNNRTG	3 cut(s)	213, 335, 627
SacII	CCGCGG	1 cut(s)	1906
SaqAI	TTAA	5 cut(s)	474, 1112, 1301, 1398, 1865
SatI	GCNGC	9 cut(s)	141, 305, 411, 791, 1073, 1706, 1709, 1809, 1903
Sau3AI	GATC	9 cut(s)	70, 115, 169, 1165, 1425, 1591, 1844, 1855, 1870
SchI	GAGTC	1 cut(s)	217
SduI	GDGCHC	6 cut(s)	526, 634, 932, 976, 1378, 1937
SexAI	ACCWGGT	1 cut(s)	1243
SfaNI	GCATC	6 cut(s)	383, 793, 1036, 1324, 1477, 1804
Sfr303I	CCGCGG	1 cut(s)	1906
SgrBI	CCGCGG	1 cut(s)	1906
SinI	GGWCC	3 cut(s)	591, 899, 1141
SmiMI	CAYNNNNRTG	3 cut(s)	213, 335, 627
SmlI	CTYRAG	4 cut(s)	38, 635, 1397, 1820
SmoI	CTYRAG	4 cut(s)	38, 635, 1397, 1820
SseBI	AGGCCT	1 cut(s)	1948
SspMI	CTAG	6 cut(s)	233, 627, 708, 894, 969, 1899
StuI	AGGCCT	1 cut(s)	1948
StyI	CCWWGG	4 cut(s)	741, 810, 1499, 1943
TaaI	ACNGT	5 cut(s)	176, 1012, 1207, 1716, 1926
TaiI	ACGT	2 cut(s)	194, 1098
TaqI	TCGA	3 cut(s)	5, 699, 1873
TatI	WGTACW	1 cut(s)	733
TauI	GCSGC	5 cut(s)	143, 307, 793, 1711, 1905
TfiI	GAWTC	2 cut(s)	853, 1579
Tru1I	TTAA	5 cut(s)	474, 1112, 1301, 1398, 1865
Tru9I	TTAA	5 cut(s)	474, 1112, 1301, 1398, 1865
TscAI	CASTG	2 cut(s)	291, 1143
TseFI	GTSAC	2 cut(s)	458, 755
TseI	GCWGC	4 cut(s)	410, 1072, 1705, 1808
Tsp45I	GTSAC	2 cut(s)	458, 755
TspDTI	ATGAA	3 cut(s)	288, 1227, 1244
TspGWI	ACGGA	3 cut(s)	128, 216, 1815
TspRI	CASTG	2 cut(s)	291, 1143
Van91I	CCANNNNNTGG	1 cut(s)	290
Vha464I	CTTAAG	1 cut(s)	1397
VneI	GTGCAC	1 cut(s)	630
VpaK11BI	GGWCC	3 cut(s)	591, 899, 1141
XapI	RAATTY	5 cut(s)	1231, 1297, 1610, 1875, 1893
XmiI	GTMKAC	2 cut(s)	835, 1098
XmnI	GAANNNNTTC	1 cut(s)	1392
XspI	CTAG	6 cut(s)	233, 627, 708, 894, 969, 1899

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.