No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G18335 |
| fragaria_vesca | FvH4_3g05631 |
| prunus_persica | Prupe.4G080200_v2.0.a1 |
| rosa_laevigata | RLG00000032062 |
| rosa_multiflora | Rmu_sc0005803.1_g000010 Rmu_sc0008587.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00062700 |
| rosa_rugosa | Rorug05G0014200 Rorug05G0014300 |
| rosa_samantha | Rh5DG104100 |
| rosa_wichuraiana | Rw5G009480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 190, 357 |
| AciI | CCGC | 3 cut(s) | 114, 123, 178 |
| AcoI | YGGCCR | 1 cut(s) | 175 |
| AcyI | GRCGYC | 1 cut(s) | 161 |
| AfaI | GTAC | 3 cut(s) | 7, 20, 134 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 311 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AoxI | GGCC | 2 cut(s) | 175, 269 |
| AspS9I | GGNCC | 1 cut(s) | 269 |
| AsuHPI | GGTGA | 2 cut(s) | 31, 49 |
| BceAI | ACGGC | 2 cut(s) | 148, 332 |
| BfaI | CTAG | 1 cut(s) | 379 |
| BisI | GCNGC | 1 cut(s) | 178 |
| BlsI | GCNGC | 1 cut(s) | 179 |
| BmcAI | AGTACT | 1 cut(s) | 20 |
| BmgT120I | GGNCC | 1 cut(s) | 269 |
| BsaHI | GRCGYC | 1 cut(s) | 161 |
| BsaJI | CCNNGG | 2 cut(s) | 172, 291 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 311 |
| Bse1I | ACTGG | 1 cut(s) | 130 |
| BseDI | CCNNGG | 2 cut(s) | 172, 291 |
| BseGI | GGATG | 1 cut(s) | 83 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 311 |
| BseNI | ACTGG | 1 cut(s) | 130 |
| BseRI | GAGGAG | 3 cut(s) | 97, 100, 161 |
| BseX3I | CGGCCG | 1 cut(s) | 175 |
| Bsh1285I | CGRYCG | 1 cut(s) | 178 |
| BshFI | GGCC | 2 cut(s) | 177, 271 |
| BsiEI | CGRYCG | 1 cut(s) | 178 |
| BsiSI | CCGG | 1 cut(s) | 219 |
| BslFI | GGGAC | 1 cut(s) | 287 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 311 |
| BsmFI | GGGAC | 1 cut(s) | 287 |
| BsnI | GGCC | 2 cut(s) | 177, 271 |
| Bsp143I | GATC | 1 cut(s) | 91 |
| BspACI | CCGC | 3 cut(s) | 114, 123, 178 |
| BspANI | GGCC | 2 cut(s) | 177, 271 |
| BsrI | ACTGG | 1 cut(s) | 130 |
| BssECI | CCNNGG | 2 cut(s) | 172, 291 |
| BssMI | GATC | 1 cut(s) | 91 |
| BssNI | GRCGYC | 1 cut(s) | 161 |
| BssT1I | CCWWGG | 1 cut(s) | 291 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 53 |
| BstACI | GRCGYC | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 83 |
| BstKTI | GATC | 1 cut(s) | 94 |
| BstMBI | GATC | 1 cut(s) | 91 |
| BstMCI | CGRYCG | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstZI | CGGCCG | 1 cut(s) | 175 |
| BsuRI | GGCC | 2 cut(s) | 177, 271 |
| BtsCI | GGATG | 1 cut(s) | 83 |
| Cfr13I | GGNCC | 1 cut(s) | 269 |
| CseI | GACGC | 1 cut(s) | 169 |
| Csp6I | GTAC | 3 cut(s) | 6, 19, 133 |
| CviAII | CATG | 1 cut(s) | 283 |
| CviJI | RGCY | 4 cut(s) | 177, 271, 297, 315 |
| CviKI_1 | RGCY | 4 cut(s) | 177, 271, 297, 315 |
| CviQI | GTAC | 3 cut(s) | 6, 19, 133 |
| DpnI | GATC | 1 cut(s) | 93 |
| DpnII | GATC | 1 cut(s) | 91 |
| EaeI | YGGCCR | 1 cut(s) | 175 |
| EagI | CGGCCG | 1 cut(s) | 175 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 53 |
| EarI | CTCTTC | 2 cut(s) | 35, 53 |
| EciI | GGCGGA | 1 cut(s) | 103 |
| EclXI | CGGCCG | 1 cut(s) | 175 |
| Eco130I | CCWWGG | 1 cut(s) | 291 |
| Eco52I | CGGCCG | 1 cut(s) | 175 |
| EcoT14I | CCWWGG | 1 cut(s) | 291 |
| ErhI | CCWWGG | 1 cut(s) | 291 |
| FaeI | CATG | 1 cut(s) | 286 |
| FaiI | YATR | 1 cut(s) | 284 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 8, 40 |
| FaqI | GGGAC | 1 cut(s) | 287 |
| FatI | CATG | 1 cut(s) | 282 |
| FblI | GTMKAC | 2 cut(s) | 190, 357 |
| Fnu4HI | GCNGC | 1 cut(s) | 178 |
| FokI | GGATG | 1 cut(s) | 70 |
| Fsp4HI | GCNGC | 1 cut(s) | 178 |
| FspBI | CTAG | 1 cut(s) | 379 |
| GluI | GCNGC | 1 cut(s) | 178 |
| HaeIII | GGCC | 2 cut(s) | 177, 271 |
| HapII | CCGG | 1 cut(s) | 219 |
| HgaI | GACGC | 1 cut(s) | 169 |
| Hin1I | GRCGYC | 1 cut(s) | 161 |
| Hin1II | CATG | 1 cut(s) | 286 |
| HincII | GTYRAC | 1 cut(s) | 191 |
| HindII | GTYRAC | 1 cut(s) | 191 |
| HpaII | CCGG | 1 cut(s) | 219 |
| HphI | GGTGA | 2 cut(s) | 31, 49 |
| Hpy166II | GTNNAC | 2 cut(s) | 191, 358 |
| Hpy188III | TCNNGA | 2 cut(s) | 151, 256 |
| Hpy8I | GTNNAC | 2 cut(s) | 191, 358 |
| Hpy99I | CGWCG | 6 cut(s) | 163, 192, 269, 322, 353, 356 |
| HpyAV | CCTTC | 3 cut(s) | 52, 70, 318 |
| HpyCH4IV | ACGT | 3 cut(s) | 147, 187, 214 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpySE526I | ACGT | 3 cut(s) | 147, 187, 214 |
| Hsp92I | GRCGYC | 1 cut(s) | 161 |
| Hsp92II | CATG | 1 cut(s) | 286 |
| Kzo9I | GATC | 1 cut(s) | 91 |
| LpnPI | CCDG | 3 cut(s) | 143, 232, 297 |
| MaeI | CTAG | 1 cut(s) | 379 |
| MaeII | ACGT | 3 cut(s) | 147, 187, 214 |
| MalI | GATC | 1 cut(s) | 93 |
| MboI | GATC | 1 cut(s) | 91 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 9 cut(s) | 38, 56, 111, 115, 118, 121, 182, 315, 377 |
| MspI | CCGG | 1 cut(s) | 219 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NdeII | GATC | 1 cut(s) | 91 |
| NlaIII | CATG | 1 cut(s) | 286 |
| NmeAIII | GCCGAG | 1 cut(s) | 153 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 351, 360 |
| PkrI | GCNGC | 1 cut(s) | 179 |
| PspPI | GGNCC | 1 cut(s) | 269 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 125, 157 |
| RsaI | GTAC | 3 cut(s) | 7, 20, 134 |
| RsaNI | GTAC | 3 cut(s) | 6, 19, 133 |
| SalI | GTCGAC | 1 cut(s) | 189 |
| SatI | GCNGC | 1 cut(s) | 178 |
| Sau3AI | GATC | 1 cut(s) | 91 |
| Sau96I | GGNCC | 1 cut(s) | 269 |
| ScaI | AGTACT | 1 cut(s) | 20 |
| SetI | ASST | 6 cut(s) | 44, 62, 150, 190, 217, 369 |
| SmlI | CTYRAG | 1 cut(s) | 14 |
| SmoI | CTYRAG | 1 cut(s) | 14 |
| SsiI | CCGC | 3 cut(s) | 114, 123, 178 |
| SspMI | CTAG | 1 cut(s) | 379 |
| StyI | CCWWGG | 1 cut(s) | 291 |
| TaiI | ACGT | 3 cut(s) | 150, 190, 217 |
| TaqI | TCGA | 1 cut(s) | 190 |
| TatI | WGTACW | 1 cut(s) | 18 |
| TauI | GCSGC | 1 cut(s) | 180 |
| TspDTI | ATGAA | 1 cut(s) | 69 |
| TspGWI | ACGGA | 2 cut(s) | 268, 348 |
| XmiI | GTMKAC | 2 cut(s) | 190, 357 |
| XspI | CTAG | 1 cut(s) | 379 |
| ZrmI | AGTACT | 1 cut(s) | 20 |