Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0004009

Physical Location & Seq

Genomic Coordinates Forward (+)

7535366 .. 7540332

Gene Structure 4967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g12634.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGGGGATAGATCTTGAACAGCCTTCGGGAGAATTCCACCAGGCAGATAATGGACCTGGTGGGAATAGTCATATGGTAGATGGCAGAGAGGAAAATACTTCTGGAGATAGAGTGATTGTAAGTGTAACTAACGTTCCTGTAAATGATAGGGAGATTGCTGGAAAAAATGGAAGTGTGTCAAATTTCAAAAACAGGGTAGATGCCAGAGATGAAATCAACTTGAATGCTCCGAAAAATATAGAGCTTCATGACGGACTGGAGTTTGAATCAAAGGAAGAAGCTTTTTCCTTCTATAAAGAATATGCCAAGTCTATGGGGTTCGCTGCAGTAATTAAGGCTAGCCGCCGGTCCAGAGCATCTGGAAAATTCATTGATGCAAAATTTGCATGCAGTAGATATGGGACCAAACCGGAAACTAGTCAACCTGAAACTGCAGAACCTGTTTCACATTCCAGAGAGTCAAGTATCTGCCTTAAGAGAAAACGAGGAGGTCGTGCTAGCCAATCTTTGGAAAAAACGGATTGTAAAGCCTGCATGCATGTTAAGAGAAGGCAAGATGGTAGATGGACTGTTTGTACTCTCATTAAAGAGCACAATCATGACATTTTTCCTGATGAAGCCTATTATTTTCGAGGGCACAGGAAGTTAGATATAAGTAGCGGTAATGTTGGTGGTAATGTCGGGGGTAATGTTGATGGCTTAAATGCTATCCGGAGAAGAACAAAGAATCTGTTTGCCAATATGTCCAGACAGTCTGGGGGCTACAAGAAGTCCACTAATCCAAAGGGTGGTGGGAAAAATCAATCACCAAGTGTACATCATTTGTCTCTAGAGGAAGGAGATGCTCAAGTCATGCTTGACCACTTTCTATGTATGCAAGATGAGAATCCTAACTTCTTTTATGCAATTGATCTGAATGAAGAGCAGCGATTGAGAAATGTTTTCTGGGTTGATGCCAAAGGTAGACTTGATTATGAAATTTTTAGTGATGTAGTATTTCTTGATACCACATATATCAAGAATGAATATAAATTGCCATTTGCTCCCTTTATTGGTGTGAACCACCATCTTCAGTTCATTTCGCTTGGATGTGCTTTACTTGCTGATGAGAGTAAATCAACCTATGTCTGGCTTATGCGGGCATGGTTAAAAGCAATGGGCGGACATGCTCCAAGAGTGATACTCACTGACCAGGACAAGTTCTTGAAAGAAGCTGTCGCAGAGGTCTTTCCTGATTCTCGTCATTGTTTTTGTTTGTGGCACATATTGGGTAAGATGCCTGAGAAGCTTGGATATGTTACAAGGCAGCACGATCAATTTATGGAGAATTTTAACGAATGCATTTTCAAGTCTTGGACAATTGAACAGGTTGAAATAAGATGGTTCAAAATGGTTGACAGATTCAATTTAAGAAATGACATATGGTTGCAGTCATTGTTTGAAGATCGTAGACAATGGATACCAGCATTCATGAGAGGCATTTTCTTGGCAGGGATGTCTACAACCCAGCAATCAGAAAGTTTAAACTGTTTCTTTGACAAATACATGCAGAGGAAAACGACATTGAAAGAGTTTCTTGAACAATACAATACAATCCTCTGTGAGAAGTATGAAGAGGAAGCAAAGGCAGATTTTGAAACATGGCATAAACAACCTGCATTGAAATCTCCATCACCTTTTGGGAAACAAATGGCTACCTTGTATACTCATGTAGTATTCAAGAAATTCCAAGTTGAGGTTTTGGGAGTAGTTGCTTGTCATCCAAAGAAAGAAGCTGAAGATGGAGCAATCAAAACTTTTAGAGTTCAAGATTTTGAAGAGGATCACCATTTCATTGTGGAGTGGAATGAACTGACGTCAGATATATCCTGTTTATGCCATTCATTTGAATTCAATGGTTTCCTTTGTAGACATGTGATGATTGTACTGCAAATATCTGGTGTACACAATATTCCATCTCAGTATATATTGAAACGTTGGACAAAAGATGCAAAGAGCAGGCAGACAAGGGGTGTGGGATCGAGTTCGTTTAAGTCTAGAGTTCAACTTTACAATGATCTATGCAGACGAGCCTTTGAATTGGGTGATGAAGGTTCTTTATCGCAGGAAAGTTATAATATTGCATTTGTGGCATTAGAAGAAGCTTTGAGAAATTGTGAGAATATGAATAACTCAATTCAGAGGGTAATACATCCAGTGTCTCCAGAGACTCATGGTTCTCATAGCTTTGAAGGAGTGAACCAAGGTAACAGCACTAACAAGATGAATAAAAAGAATAGTACATCTAAGAAAGGACAGGTACATTCTGAGCCAGAGGTCCTAACCATTGAGATGCAAGAGAGCTGGCAAGGACTGGAACAATTGAGCTCGAGTGCTACCACCCTAGATGGTTATATTGGCCCACAACAACTAGTTCAAGGAATGGGGCCATTAAACACAATTTCCTCAAGGCGTGAAAATTATTATAGCAATCAGCATATGCAGGGGCTGGGGCAATTGAACTCAATCACACACATCCAGGATGCTCAATACATAAATCAGCAAAGACTGCATGGAGTGGGGCAGTTCCATTTCAGACCACAAACTATCCCGAATTTTGTAATTGCAGATGATCCGCAAGATGTGGATCATTCCACTGTGGGACGCACTCAGATTCATGGCTTGGCGTCAAAGCATTTGCAGTCGAAACATCCATCTTGTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

902

Amino Acids

102.83

Weight (kDa)

6.96

Isoelectric Point (pI)

54.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZSWIM1-3_RNaseH-like	PF21056	121 - 236	5.2e-06	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	153 - 245	5.4e-29	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19990 AT4G19990 AT4G19990 AT4G19990 AT4G19990 AT4G19990 AT4G19990
fragaria_vesca	FvH4_3g12634 FvH4_3g12634 FvH4_3g12634 FvH4_3g12634
malus_domestica	MD05G1249100.v1.1
prunus_persica	Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1
pyrus_communis	pycom05g22600
rosa_chinensis	RchiOBHm_Chr5g0020601
rosa_laevigata	RLG00000032542
rosa_multiflora	Rmu_sc0005607.1_g000012
rosa_roxburghii	Rroxscaffold_1G00057690
rosa_rugosa	Rorug05G0061500 Rorug05G0061600 Rorug05G0061600 Rorug05G0061600 Rorug05G0061600
rosa_samantha	Rh5AG151500 Rh5BG151100 Rh5CG162500 Rh5DG150400
rosa_wichuraiana	Rw5G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2115
AatII	GACGTC	1 cut(s)	1859
Acc36I	ACCTGC	1 cut(s)	1663
AccB7I	CCANNNNNTGG	2 cut(s)	508, 788
AccI	GTMKAC	5 cut(s)	964, 1450, 1499, 1703, 1909
AccIII	TCCGGA	1 cut(s)	711
AciI	CCGC	5 cut(s)	343, 660, 1138, 1161, 2615
AclI	AACGTT	2 cut(s)	132, 1975
AclWI	GGATC	4 cut(s)	1830, 2026, 2606, 2634
AcsI	RAATTY	9 cut(s)	32, 181, 365, 380, 978, 1327, 1724, 1889, 2593
AcuI	CTGAAG	2 cut(s)	1055, 1797
AcyI	GRCGYC	2 cut(s)	1856, 2666
AdeI	CACNNNGTG	1 cut(s)	812
AfaI	GTAC	6 cut(s)	577, 816, 1926, 1944, 2281, 2301
AfiI	CCNNNNNNNGG	5 cut(s)	508, 788, 1052, 1128, 1735
AflII	CTTAAG	1 cut(s)	473
AflIII	ACRYGT	1 cut(s)	1912
AhlI	ACTAGT	2 cut(s)	416, 2410
AjnI	CCWGG	4 cut(s)	39, 55, 1191, 2517
AluBI	AGCT	9 cut(s)	244, 281, 1214, 1288, 1775, 2144, 2226, 2343, 2367
AluI	AGCT	9 cut(s)	244, 281, 1214, 1288, 1775, 2144, 2226, 2343, 2367
Alw21I	GWGCWC	2 cut(s)	594, 2369
Alw26I	GTCTC	3 cut(s)	831, 2201, 2205
AlwI	GGATC	4 cut(s)	1830, 2026, 2606, 2634
AlwNI	CAGNNNCTG	2 cut(s)	440, 2488
Ama87I	CYCGRG	1 cut(s)	2368
Aor13HI	TCCGGA	1 cut(s)	711
AoxI	GGCC	2 cut(s)	2398, 2426
ApeKI	GCWGC	3 cut(s)	323, 925, 1306
ApoI	RAATTY	9 cut(s)	32, 181, 365, 380, 978, 1327, 1724, 1889, 2593
AspS9I	GGNCC	6 cut(s)	53, 348, 402, 2317, 2399, 2426
AsuHPI	GGTGA	4 cut(s)	798, 1665, 1817, 2096
AsuNHI	GCTAGC	2 cut(s)	338, 497
AvaI	CYCGRG	1 cut(s)	2368
AvaII	GGWCC	4 cut(s)	53, 348, 402, 2317
BaeGI	GKGCMC	1 cut(s)	639
BanII	GRGCYC	1 cut(s)	2369
Bbv12I	GWGCWC	2 cut(s)	594, 2369
BbvI	GCAGC	3 cut(s)	310, 937, 1318
BciT130I	CCWGG	4 cut(s)	41, 57, 1193, 2519
BciVI	GTATCC	1 cut(s)	1452
BcoDI	GTCTC	3 cut(s)	831, 2201, 2205
BcuI	ACTAGT	2 cut(s)	416, 2410
BfaI	CTAG	7 cut(s)	339, 417, 498, 830, 2037, 2384, 2411
BfmI	CTRYAG	2 cut(s)	324, 432
BfrI	CTTAAG	1 cut(s)	473
BfuAI	ACCTGC	1 cut(s)	1663
BfuI	GTATCC	1 cut(s)	1452
BglII	AGATCT	1 cut(s)	10
BisI	GCNGC	4 cut(s)	324, 343, 926, 1307
BlsI	GCNGC	4 cut(s)	325, 344, 927, 1308
Bme1390I	CCNGG	4 cut(s)	41, 57, 1193, 2519
Bme18I	GGWCC	4 cut(s)	53, 348, 402, 2317
BmeT110I	CYCGRG	1 cut(s)	2368
BmgT120I	GGNCC	6 cut(s)	53, 348, 402, 2317, 2399, 2426
BmiI	GGNNCC	2 cut(s)	403, 2427
BmrFI	CCNGG	4 cut(s)	41, 57, 1193, 2519
BmsI	GCATC	9 cut(s)	190, 364, 365, 832, 943, 1266, 1978, 2322, 2512
BmtI	GCTAGC	2 cut(s)	342, 501
BplI	GAGNNNNNCTC	2 cut(s)	1167, 1199
BpmI	CTGGAG	3 cut(s)	123, 278, 2187
BpuEI	CTTGAG	2 cut(s)	831, 2431
BsaBI	GATNNNNATC	2 cut(s)	885, 2625
BsaHI	GRCGYC	2 cut(s)	1856, 2666
BsaJI	CCNNGG	1 cut(s)	2242
BsaWI	WCCGGW	2 cut(s)	409, 711
BsaXI	ACNNNNNCTCC	2 cut(s)	96, 126
Bsc4I	CCNNNNNNNGG	5 cut(s)	508, 788, 1052, 1128, 1735
Bse118I	RCCGGY	1 cut(s)	345
Bse1I	ACTGG	3 cut(s)	261, 2195, 2358
Bse3DI	GCAATG	1 cut(s)	1161
Bse8I	GATNNNNATC	2 cut(s)	885, 2625
BseAI	TCCGGA	1 cut(s)	711
BseBI	CCWGG	4 cut(s)	41, 57, 1193, 2519
BseDI	CCNNGG	1 cut(s)	2242
BseGI	GGATG	7 cut(s)	1094, 1500, 1759, 2191, 2514, 2527, 2689
BseJI	GATNNNNATC	2 cut(s)	885, 2625
BseLI	CCNNNNNNNGG	5 cut(s)	508, 788, 1052, 1128, 1735
BseMI	GCAATG	1 cut(s)	1161
BseMII	CTCAG	4 cut(s)	1272, 1973, 2298, 2663
BseNI	ACTGG	3 cut(s)	261, 2195, 2358
BseRI	GAGGAG	1 cut(s)	501
BseSI	GKGCMC	1 cut(s)	639
BseXI	GCAGC	3 cut(s)	310, 937, 1318
BseYI	CCCAGC	2 cut(s)	1506, 2488
BshFI	GGCC	2 cut(s)	2400, 2428
BsiHKAI	GWGCWC	2 cut(s)	594, 2369
BsiHKCI	CYCGRG	1 cut(s)	2368
BsiSI	CCGG	3 cut(s)	346, 410, 712
BslFI	GGGAC	2 cut(s)	415, 2655
BslI	CCNNNNNNNGG	5 cut(s)	508, 788, 1052, 1128, 1735
BsmAI	GTCTC	3 cut(s)	831, 2201, 2205
BsmFI	GGGAC	2 cut(s)	415, 2655
BsmI	GAATGC	3 cut(s)	229, 1343, 1466
BsnI	GGCC	2 cut(s)	2400, 2428
BsoBI	CYCGRG	1 cut(s)	2368
Bsp1286I	GDGCHC	3 cut(s)	594, 639, 2369
Bsp13I	TCCGGA	1 cut(s)	711
Bsp1407I	TGTACA	2 cut(s)	814, 1942
Bsp143I	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
BspACI	CCGC	5 cut(s)	343, 660, 1138, 1161, 2615
BspANI	GGCC	2 cut(s)	2400, 2428
BspCNI	CTCAG	4 cut(s)	1273, 1972, 2299, 2662
BspEI	TCCGGA	1 cut(s)	711
BspHI	TCATGA	3 cut(s)	247, 598, 1470
BspLI	GGNNCC	2 cut(s)	403, 2427
BspMAI	CTGCAG	2 cut(s)	328, 436
BspMI	ACCTGC	1 cut(s)	1663
BspOI	GCTAGC	2 cut(s)	342, 501
BspPI	GGATC	4 cut(s)	1830, 2026, 2606, 2634
BspQI	GCTCTTC	1 cut(s)	915
BspTI	CTTAAG	1 cut(s)	473
BsrDI	GCAATG	1 cut(s)	1161
BsrFI	RCCGGY	1 cut(s)	345
BsrGI	TGTACA	2 cut(s)	814, 1942
BsrI	ACTGG	3 cut(s)	261, 2195, 2358
BssAI	RCCGGY	1 cut(s)	345
BssECI	CCNNGG	1 cut(s)	2242
BssMI	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
BssNAI	GTATAC	1 cut(s)	1704
BssNI	GRCGYC	2 cut(s)	1856, 2666
BssT1I	CCWWGG	1 cut(s)	2242
Bst1107I	GTATAC	1 cut(s)	1704
Bst2UI	CCWGG	4 cut(s)	41, 57, 1193, 2519
Bst4CI	ACNGT	4 cut(s)	571, 753, 1529, 2638
Bst6I	CTCTTC	3 cut(s)	915, 1608, 1812
BstACI	GRCGYC	2 cut(s)	1856, 2666
BstAFI	CTTAAG	1 cut(s)	473
BstAPI	GCANNNNNTGC	2 cut(s)	383, 2548
BstAUI	TGTACA	2 cut(s)	814, 1942
BstC8I	GCNNGC	8 cut(s)	340, 388, 499, 532, 536, 1140, 2000, 2345
BstDEI	CTNAG	5 cut(s)	1281, 1959, 2286, 2307, 2649
BstF5I	GGATG	7 cut(s)	1094, 1500, 1759, 2191, 2514, 2527, 2689
BstKTI	GATC	9 cut(s)	13, 913, 1315, 1447, 1825, 2021, 2059, 2614, 2629
BstMAI	GTCTC	3 cut(s)	831, 2201, 2205
BstMBI	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
BstMWI	GCNNNNNNNGC	5 cut(s)	383, 1100, 1285, 2129, 2548
BstNI	CCWGG	4 cut(s)	41, 57, 1193, 2519
BstNSI	RCATGY	6 cut(s)	390, 538, 542, 1169, 1549, 1916
BstSCI	CCNGG	4 cut(s)	39, 55, 1191, 2517
BstSFI	CTRYAG	2 cut(s)	324, 432
BstSLI	GKGCMC	1 cut(s)	639
BstV1I	GCAGC	3 cut(s)	310, 937, 1318
BstX2I	RGATCY	1 cut(s)	10
BstXI	CCANNNNNNTGG	1 cut(s)	313
BstYI	RGATCY	1 cut(s)	10
BstZ17I	GTATAC	1 cut(s)	1704
BsuI	GTATCC	1 cut(s)	1452
BsuRI	GGCC	2 cut(s)	2400, 2428
BtsCI	GGATG	7 cut(s)	1094, 1500, 1759, 2191, 2514, 2527, 2689
BtsIMutI	CAGTG	3 cut(s)	1185, 2202, 2634
BveI	ACCTGC	1 cut(s)	1663
Cac8I	GCNNGC	8 cut(s)	340, 388, 499, 532, 536, 1140, 2000, 2345
CaiI	CAGNNNCTG	2 cut(s)	440, 2488
CciI	TCATGA	3 cut(s)	247, 598, 1470
Cfr10I	RCCGGY	1 cut(s)	345
Cfr13I	GGNCC	6 cut(s)	53, 348, 402, 2317, 2399, 2426
CseI	GACGC	2 cut(s)	2652, 2655
CsiI	ACCWGGT	1 cut(s)	55
Csp6I	GTAC	6 cut(s)	576, 815, 1925, 1943, 2280, 2300
CspCI	CAANNNNNGTGG	2 cut(s)	1995, 2030
CviQI	GTAC	6 cut(s)	576, 815, 1925, 1943, 2280, 2300
DdeI	CTNAG	5 cut(s)	1281, 1959, 2286, 2307, 2649
DpnI	GATC	9 cut(s)	12, 912, 1314, 1446, 1824, 2020, 2058, 2613, 2628
DpnII	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
DraI	TTTAAA	1 cut(s)	1524
DraIII	CACNNNGTG	1 cut(s)	812
Eam1104I	CTCTTC	3 cut(s)	915, 1608, 1812
EarI	CTCTTC	3 cut(s)	915, 1608, 1812
EciI	GGCGGA	1 cut(s)	1176
Ecl136II	GAGCTC	1 cut(s)	2367
Eco130I	CCWWGG	1 cut(s)	2242
Eco24I	GRGCYC	1 cut(s)	2369
Eco47I	GGWCC	4 cut(s)	53, 348, 402, 2317
Eco53kI	GAGCTC	1 cut(s)	2367
Eco57I	CTGAAG	2 cut(s)	1055, 1797
Eco88I	CYCGRG	1 cut(s)	2368
EcoICRI	GAGCTC	1 cut(s)	2367
EcoO109I	RGGNCCY	1 cut(s)	2317
EcoRI	GAATTC	2 cut(s)	32, 1889
EcoRII	CCWGG	4 cut(s)	39, 55, 1191, 2517
EcoT14I	CCWWGG	1 cut(s)	2242
EcoT22I	ATGCAT	2 cut(s)	540, 1343
EcoT38I	GRGCYC	1 cut(s)	2369
ErhI	CCWWGG	1 cut(s)	2242
FalI	AAGNNNNNCTT	6 cut(s)	840, 872, 951, 983, 1560, 1592
FaqI	GGGAC	2 cut(s)	415, 2655
FauI	CCCGC	1 cut(s)	1131
FauNDI	CATATG	3 cut(s)	72, 1421, 2478
FblI	GTMKAC	5 cut(s)	964, 1450, 1499, 1703, 1909
Fnu4HI	GCNGC	4 cut(s)	324, 343, 926, 1307
FokI	GGATG	7 cut(s)	1101, 1507, 1746, 2178, 2501, 2534, 2676
FriOI	GRGCYC	1 cut(s)	2369
Fsp4HI	GCNGC	4 cut(s)	324, 343, 926, 1307
FspBI	CTAG	7 cut(s)	339, 417, 498, 830, 2037, 2384, 2411
GluI	GCNGC	4 cut(s)	324, 343, 926, 1307
GsaI	CCCAGC	2 cut(s)	1510, 2492
GsuI	CTGGAG	3 cut(s)	123, 278, 2187
HaeIII	GGCC	2 cut(s)	2400, 2428
HapII	CCGG	3 cut(s)	346, 410, 712
HgaI	GACGC	2 cut(s)	2652, 2655
Hin1I	GRCGYC	2 cut(s)	1856, 2666
HincII	GTYRAC	2 cut(s)	422, 1396
HindII	GTYRAC	2 cut(s)	422, 1396
HindIII	AAGCTT	3 cut(s)	279, 1286, 2142
HinfI	GANTC	8 cut(s)	266, 458, 727, 886, 1235, 1401, 2209, 2653
HpaII	CCGG	3 cut(s)	346, 410, 712
HphI	GGTGA	4 cut(s)	798, 1665, 1817, 2096
Hpy188I	TCNGA	8 cut(s)	231, 915, 1516, 1861, 2181, 2308, 2576, 2652
HpyAV	CCTTC	6 cut(s)	33, 298, 543, 830, 2084, 2225
HpyCH4III	ACNGT	4 cut(s)	571, 753, 1529, 2638
HpyCH4IV	ACGT	3 cut(s)	132, 1856, 1975
HpyF10VI	GCNNNNNNNGC	5 cut(s)	383, 1100, 1285, 2129, 2548
HpyF3I	CTNAG	5 cut(s)	1281, 1959, 2286, 2307, 2649
HpySE526I	ACGT	3 cut(s)	132, 1856, 1975
Hsp92I	GRCGYC	2 cut(s)	1856, 2666
Kpn2I	TCCGGA	1 cut(s)	711
Kzo9I	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
LguI	GCTCTTC	1 cut(s)	915
LmnI	GCTCC	4 cut(s)	232, 1048, 1174, 1784
Lsp1109I	GCAGC	3 cut(s)	310, 937, 1318
LweI	GCATC	9 cut(s)	190, 364, 365, 832, 943, 1266, 1978, 2322, 2512
MabI	ACCWGGT	1 cut(s)	55
MaeI	CTAG	7 cut(s)	339, 417, 498, 830, 2037, 2384, 2411
MaeII	ACGT	3 cut(s)	132, 1856, 1975
MaeIII	GTNAC	3 cut(s)	124, 1297, 2246
MalI	GATC	9 cut(s)	12, 912, 1314, 1446, 1824, 2020, 2058, 2613, 2628
MboI	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
MboII	GAAGA	9 cut(s)	287, 729, 932, 1061, 1454, 1625, 1790, 1829, 2150
MfeI	CAATTG	4 cut(s)	906, 1359, 2360, 2495
MflI	RGATCY	1 cut(s)	10
MhlI	GDGCHC	3 cut(s)	594, 639, 2369
MlyI	GAGTC	2 cut(s)	467, 2203
MmeI	TCCRAC	1 cut(s)	1958
Mph1103I	ATGCAT	2 cut(s)	540, 1343
MroI	TCCGGA	1 cut(s)	711
MslI	CAYNNNNRTG	2 cut(s)	597, 2330
MspCI	CTTAAG	1 cut(s)	473
MspI	CCGG	3 cut(s)	346, 410, 712
MspR9I	CCNGG	4 cut(s)	41, 57, 1193, 2519
MssI	GTTTAAAC	1 cut(s)	1524
MunI	CAATTG	4 cut(s)	906, 1359, 2360, 2495
Mva1269I	GAATGC	3 cut(s)	229, 1343, 1466
MvaI	CCWGG	4 cut(s)	41, 57, 1193, 2519
MwoI	GCNNNNNNNGC	5 cut(s)	383, 1100, 1285, 2129, 2548
NdeI	CATATG	3 cut(s)	72, 1421, 2478
NdeII	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
NheI	GCTAGC	2 cut(s)	338, 497
NlaIV	GGNNCC	2 cut(s)	403, 2427
NsiI	ATGCAT	2 cut(s)	540, 1343
NspI	RCATGY	6 cut(s)	390, 538, 542, 1169, 1549, 1916
PaeI	GCATGC	2 cut(s)	390, 538
PaeR7I	CTCGAG	1 cut(s)	2368
PagI	TCATGA	3 cut(s)	247, 598, 1470
PciI	ACATGT	1 cut(s)	1912
PciSI	GCTCTTC	1 cut(s)	915
PcsI	WCGNNNNNNNCGW	1 cut(s)	490
PctI	GAATGC	3 cut(s)	229, 1343, 1466
PfeI	GAWTC	6 cut(s)	266, 727, 886, 1235, 1401, 2653
PflMI	CCANNNNNTGG	2 cut(s)	508, 788
PfoI	TCCNGGA	1 cut(s)	2517
PkrI	GCNGC	4 cut(s)	325, 344, 927, 1308
PleI	GAGTC	2 cut(s)	466, 2203
PmeI	GTTTAAAC	1 cut(s)	1524
PpsI	GAGTC	2 cut(s)	466, 2203
PpuMI	RGGWCCY	1 cut(s)	2317
PscI	ACATGT	1 cut(s)	1912
PsiI	TTATAA	1 cut(s)	2115
Psp124BI	GAGCTC	1 cut(s)	2369
Psp1406I	AACGTT	2 cut(s)	132, 1975
Psp5II	RGGWCCY	1 cut(s)	2317
Psp6I	CCWGG	4 cut(s)	39, 55, 1191, 2517
PspFI	CCCAGC	2 cut(s)	1506, 2488
PspGI	CCWGG	4 cut(s)	39, 55, 1191, 2517
PspN4I	GGNNCC	2 cut(s)	403, 2427
PspPI	GGNCC	6 cut(s)	53, 348, 402, 2317, 2399, 2426
PspPPI	RGGWCCY	1 cut(s)	2317
PspXI	VCTCGAGB	1 cut(s)	2368
PsrI	GAACNNNNNNTAC	2 cut(s)	117, 149
PstI	CTGCAG	2 cut(s)	328, 436
PstNI	CAGNNNCTG	2 cut(s)	440, 2488
PsuI	RGATCY	1 cut(s)	10
RsaI	GTAC	6 cut(s)	577, 816, 1926, 1944, 2281, 2301
RsaNI	GTAC	6 cut(s)	576, 815, 1925, 1943, 2280, 2300
RseI	CAYNNNNRTG	2 cut(s)	597, 2330
SacI	GAGCTC	1 cut(s)	2369
SapI	GCTCTTC	1 cut(s)	915
SatI	GCNGC	4 cut(s)	324, 343, 926, 1307
Sau3AI	GATC	9 cut(s)	10, 910, 1312, 1444, 1822, 2018, 2056, 2611, 2626
Sau96I	GGNCC	6 cut(s)	53, 348, 402, 2317, 2399, 2426
SchI	GAGTC	2 cut(s)	467, 2203
ScrFI	CCNGG	4 cut(s)	41, 57, 1193, 2519
SduI	GDGCHC	3 cut(s)	594, 639, 2369
SexAI	ACCWGGT	1 cut(s)	55
SfaNI	GCATC	9 cut(s)	190, 364, 365, 832, 943, 1266, 1978, 2322, 2512
SfcI	CTRYAG	2 cut(s)	324, 432
Sfr274I	CTCGAG	1 cut(s)	2368
SinI	GGWCC	4 cut(s)	53, 348, 402, 2317
SlaI	CTCGAG	1 cut(s)	2368
SmiMI	CAYNNNNRTG	2 cut(s)	597, 2330
SmlI	CTYRAG	4 cut(s)	473, 846, 2368, 2446
SmoI	CTYRAG	4 cut(s)	473, 846, 2368, 2446
SpeI	ACTAGT	2 cut(s)	416, 2410
SphI	GCATGC	2 cut(s)	390, 538
SsiI	CCGC	5 cut(s)	343, 660, 1138, 1161, 2615
SspI	AATATT	2 cut(s)	1951, 2119
SspMI	CTAG	7 cut(s)	339, 417, 498, 830, 2037, 2384, 2411
SstI	GAGCTC	1 cut(s)	2369
StyD4I	CCNGG	4 cut(s)	39, 55, 1191, 2517
StyI	CCWWGG	1 cut(s)	2242
TaaI	ACNGT	4 cut(s)	571, 753, 1529, 2638
TaiI	ACGT	3 cut(s)	135, 1859, 1978
TaqI	TCGA	4 cut(s)	631, 2021, 2369, 2684
TatI	WGTACW	5 cut(s)	575, 814, 1924, 1942, 2279
TauI	GCSGC	1 cut(s)	345
TfiI	GAWTC	6 cut(s)	266, 727, 886, 1235, 1401, 2653
TscAI	CASTG	3 cut(s)	1192, 2202, 2641
TseI	GCWGC	3 cut(s)	323, 925, 1306
TspGWI	ACGGA	2 cut(s)	267, 533
TspRI	CASTG	3 cut(s)	1192, 2202, 2641
Van91I	CCANNNNNTGG	2 cut(s)	508, 788
Vha464I	CTTAAG	1 cut(s)	473
VpaK11BI	GGWCC	4 cut(s)	53, 348, 402, 2317
XapI	RAATTY	9 cut(s)	32, 181, 365, 380, 978, 1327, 1724, 1889, 2593
XbaI	TCTAGA	2 cut(s)	829, 2036
XceI	RCATGY	6 cut(s)	390, 538, 542, 1169, 1549, 1916
XcmI	CCANNNNNNNNNTGG	1 cut(s)	47
XhoI	CTCGAG	1 cut(s)	2368
XmiI	GTMKAC	5 cut(s)	964, 1450, 1499, 1703, 1909
XspI	CTAG	7 cut(s)	339, 417, 498, 830, 2037, 2384, 2411
ZraI	GACGTC	1 cut(s)	1857
Zsp2I	ATGCAT	2 cut(s)	540, 1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.