Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004009

Physical Location & Seq

Genomic Coordinates Forward (+)

16293523 .. 16297080

Gene Structure 3558 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000032542

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGAGGATTGATCTTGAACAGCCTTCGGGAGAATCCCACAAGGCACATAATGGACCTAGTGGCAGAGAGGAAGATACTTCTGGAGATCGAGCCATCGTAAGTGTAACTAATGTTCCTGTAAATGACAAGGAGAATACAGGAAAAAATGTGAATGGAAGTGTGTCAAATTCCAAAAACAGGGTAGATGCCAGAGATGAAATCAACTTGAATGCTCCGAAAGATTTAGAACTTCATGACGGATTGGAGTTTGAATCAAAGGAAGAAGCTTTTTCCTTCTATAAAGAATATGCCAAGTCTATGGGGTTCGCTGCAGTAATTAAGGCTAGCCGACGGTCCAGAGCATCTGGAAAATTTATTGATGCAAAATTTGGATGCAGTAGATATGGGACCAAACCAGAAACTAGTAAAGCTCAAACTGGAGAGCCTGTTTCATATTCCAGAGAATCAAGTATCTGTCTTAAGAGAAAACGAGGAGGTCGTGCTAGCCGATCTTTGGAAAAAACAGATTGCAAAGCCTGCATGCATGTTAAGAGAAGGCAAGATGGTAGATGGACTGTTTGTACTCTCATTAAAGAGCACAATCATGAAATTTTCCCTGATGAAGCCTATTTTTTTCGAGGGCACAGGAAGTTAGATTTAAGTAGTGGTAATGTTGATGGCATACACGCTATCCGGAGAAGAACAAAGAATATGTTTGCCAATATGTCCAGACATTCTGGGGGGTACAAGAAATCCGGTAATCAAAAGGGTGGTGGGAAAAATCAGTCACCAAGCTTACACCATTTGTCTTTAGAGGAAGCGTTGAAATCTCCATCACCTTTTGGAAAACAAATGGCTACCATGTATACTCATGCAATATTTAAGAAATTCCAAGTTGAGGTGTTGGGAGTAGTTGCTTGTCACCCAAAGAAAGAAGCTGAAGATGGAGGAATCAAAACTTTTCGAGTTCAAGATTTTGAAGAGAATCAACATTTCATTGTGGAGTGGAATGAAATGACGTCAGATATATCCTGTTTGTGCCATTCATTTGAATTCAATGGTTTCCTTTGTAGACATGTGTTGATTGTGCTGCAAATATCTGGTGTACACAATATTCCATCCCAGTATATATTAAAACGTTGGACAAAAGATGCAAAGAGCAGGCAAACAAGGGGTGTAGGGTCGAGTTCGGTTGAGTCTAGAGTTCAACGTTACAATGATCTATGCCGACGTGCCTTTGAATTGGGTGATGAAGGTTCTTTATCCCAGGAAAGTTACAATATTGCATTTATGGCATTGGAAGAAGCTTTGAGAAATTGTGAGAATATAAATAACTCAATTCAGAGTGTAATAGAACCAGTGTCTCCAGAGACTCATGGTCCTCATAGCTTTGAAGGAATGAACCAAGGTAACAGCACTAACAAGACAAATAAAAAGAATATTACATCCAAGAAAGGACAGGTACATTCAGAGTCAGAGGTCCTAACCATTGAGATGCAAGAGAGCTGGCAAGGAATGGAACAACTGAGCTCGAGAGCTCCCACCCTAGATGGTTACATTGGTCCTCAACAAATCGTTCAAGGAATGGGGCCATTAAACACAGTTTCCTCAAGGCGTGATAATTATTATAGCAATCAGCATATGCAAGGGCTGGGGCAATTGAACTCAATCACACCCATCCAGGATGCTCAATACATAGCTCAGCAAAGACTGCATGGAGTGGGGCAGTTGCATTTCAGACCACAAACTATTCCAAGTTTTGTAATTGAAGATGACTTGCAAGATATGGATCAGTCCACTGCGGGACGCACTCAGATTCATGGGTTGGCATCAAACCATTTGCAGTCGAAACATCCCTCTCGTCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

616

Amino Acids

68.98

Weight (kDa)

8.84

Isoelectric Point (pI)

59.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	91 - 199	3.7e-24	FAR1 DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19990 AT4G19990 AT4G19990 AT4G19990 AT4G19990 AT4G19990 AT4G19990
fragaria_vesca	FvH4_3g12634 FvH4_3g12634 FvH4_3g12634 FvH4_3g12634
malus_domestica	MD05G1249100.v1.1
prunus_persica	Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1 Prupe.4G115100_v2.0.a1
pyrus_communis	pycom05g22600
rosa_chinensis	RchiOBHm_Chr5g0020601
rosa_laevigata	RLG00000032542
rosa_multiflora	Rmu_sc0005607.1_g000012
rosa_roxburghii	Rroxscaffold_1G00057690
rosa_rugosa	Rorug05G0061500 Rorug05G0061600 Rorug05G0061600 Rorug05G0061600 Rorug05G0061600
rosa_samantha	Rh5AG151500 Rh5BG151100 Rh5CG162500 Rh5DG150400
rosa_wichuraiana	Rw5G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1001
AccI	GTMKAC	2 cut(s)	845, 1051
AccIII	TCCGGA	1 cut(s)	672
AciI	CCGC	1 cut(s)	1781
AclI	AACGTT	2 cut(s)	1117, 1189
AclWI	GGATC	1 cut(s)	1776
AcsI	RAATTY	6 cut(s)	166, 350, 365, 588, 866, 1031
AcuI	CTGAAG	1 cut(s)	939
AcyI	GRCGYC	1 cut(s)	998
AfaI	GTAC	4 cut(s)	562, 725, 1086, 1443
AfiI	CCNNNNNNNGG	3 cut(s)	177, 493, 877
AflII	CTTAAG	1 cut(s)	458
AflIII	ACRYGT	1 cut(s)	1054
AhdI	GACNNNNNGTC	1 cut(s)	1356
AhlI	ACTAGT	1 cut(s)	401
AjiI	CACGTC	1 cut(s)	1211
AjnI	CCWGG	2 cut(s)	1245, 1659
Alw21I	GWGCWC	3 cut(s)	579, 1511, 1519
Alw26I	GTCTC	2 cut(s)	1343, 1347
AlwI	GGATC	1 cut(s)	1776
Ama87I	CYCGRG	1 cut(s)	1510
Aor13HI	TCCGGA	1 cut(s)	672
AoxI	GGCC	1 cut(s)	1568
ApeKI	GCWGC	2 cut(s)	308, 1069
ApoI	RAATTY	6 cut(s)	166, 350, 365, 588, 866, 1031
AspS9I	GGNCC	7 cut(s)	53, 333, 387, 1358, 1459, 1541, 1568
AsuHPI	GGTGA	4 cut(s)	759, 807, 893, 1238
AsuNHI	GCTAGC	2 cut(s)	323, 482
AvaI	CYCGRG	1 cut(s)	1510
AvaII	GGWCC	6 cut(s)	53, 333, 387, 1358, 1459, 1541
BaeGI	GKGCMC	1 cut(s)	624
BanII	GRGCYC	2 cut(s)	1511, 1519
Bbv12I	GWGCWC	3 cut(s)	579, 1511, 1519
BbvI	GCAGC	2 cut(s)	295, 1056
BccI	CCATC	9 cut(s)	101, 536, 543, 650, 820, 917, 1105, 1523, 1664
BciT130I	CCWGG	2 cut(s)	1247, 1661
BcoDI	GTCTC	2 cut(s)	1343, 1347
BcuI	ACTAGT	1 cut(s)	401
BfaI	CTAG	6 cut(s)	57, 324, 402, 483, 1179, 1526
BfmI	CTRYAG	1 cut(s)	309
BfrI	CTTAAG	1 cut(s)	458
BisI	GCNGC	2 cut(s)	309, 1070
BlpI	GCTNAGC	1 cut(s)	1680
BlsI	GCNGC	2 cut(s)	310, 1071
Bme1390I	CCNGG	2 cut(s)	1247, 1661
Bme18I	GGWCC	6 cut(s)	53, 333, 387, 1358, 1459, 1541
BmeRI	GACNNNNNGTC	1 cut(s)	1356
BmeT110I	CYCGRG	1 cut(s)	1510
BmgBI	CACGTC	1 cut(s)	1211
BmgT120I	GGNCC	7 cut(s)	53, 333, 387, 1358, 1459, 1541, 1568
BmiI	GGNNCC	2 cut(s)	388, 1569
BmrFI	CCNGG	2 cut(s)	1247, 1661
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	8 cut(s)	175, 349, 350, 362, 1120, 1464, 1654, 1817
BmtI	GCTAGC	2 cut(s)	327, 486
BmuI	ACTGGG	1 cut(s)	1096
BpmI	CTGGAG	3 cut(s)	102, 438, 1329
Bpu1102I	GCTNAGC	1 cut(s)	1680
BpuEI	CTTGAG	1 cut(s)	1573
BsaBI	GATNNNNATC	1 cut(s)	1767
BsaHI	GRCGYC	1 cut(s)	998
BsaJI	CCNNGG	2 cut(s)	1245, 1384
BsaWI	WCCGGW	2 cut(s)	672, 734
BsaXI	ACNNNNNCTCC	2 cut(s)	411, 441
Bsc4I	CCNNNNNNNGG	3 cut(s)	177, 493, 877
Bse1I	ACTGG	3 cut(s)	421, 1102, 1337
Bse8I	GATNNNNATC	1 cut(s)	1767
BseAI	TCCGGA	1 cut(s)	672
BseBI	CCWGG	2 cut(s)	1247, 1661
BseDI	CCNNGG	2 cut(s)	1245, 1384
BseGI	GGATG	6 cut(s)	377, 1097, 1424, 1656, 1669, 1831
BseJI	GATNNNNATC	1 cut(s)	1767
BseLI	CCNNNNNNNGG	3 cut(s)	177, 493, 877
BseMII	CTCAG	3 cut(s)	1496, 1694, 1805
BseNI	ACTGG	3 cut(s)	421, 1102, 1337
BseRI	GAGGAG	1 cut(s)	486
BseSI	GKGCMC	1 cut(s)	624
BseXI	GCAGC	2 cut(s)	295, 1056
BseYI	CCCAGC	1 cut(s)	1630
BshFI	GGCC	1 cut(s)	1570
BsiHKAI	GWGCWC	3 cut(s)	579, 1511, 1519
BsiHKCI	CYCGRG	1 cut(s)	1510
BsiSI	CCGG	2 cut(s)	673, 735
BslFI	GGGAC	2 cut(s)	400, 1797
BslI	CCNNNNNNNGG	3 cut(s)	177, 493, 877
BsmAI	GTCTC	2 cut(s)	1343, 1347
BsmFI	GGGAC	2 cut(s)	400, 1797
BsmI	GAATGC	1 cut(s)	214
BsnI	GGCC	1 cut(s)	1570
BsoBI	CYCGRG	1 cut(s)	1510
Bsp1286I	GDGCHC	4 cut(s)	579, 624, 1511, 1519
Bsp13I	TCCGGA	1 cut(s)	672
Bsp1407I	TGTACA	1 cut(s)	1084
Bsp143I	GATC	5 cut(s)	10, 85, 488, 1198, 1768
Bsp1720I	GCTNAGC	1 cut(s)	1680
BspACI	CCGC	1 cut(s)	1781
BspANI	GGCC	1 cut(s)	1570
BspCNI	CTCAG	3 cut(s)	1497, 1693, 1804
BspEI	TCCGGA	1 cut(s)	672
BspHI	TCATGA	2 cut(s)	232, 583
BspLI	GGNNCC	2 cut(s)	388, 1569
BspMAI	CTGCAG	1 cut(s)	313
BspOI	GCTAGC	2 cut(s)	327, 486
BspPI	GGATC	1 cut(s)	1776
BspTI	CTTAAG	1 cut(s)	458
BsrGI	TGTACA	1 cut(s)	1084
BsrI	ACTGG	3 cut(s)	421, 1102, 1337
BssECI	CCNNGG	2 cut(s)	1245, 1384
BssMI	GATC	5 cut(s)	10, 85, 488, 1198, 1768
BssNAI	GTATAC	1 cut(s)	846
BssNI	GRCGYC	1 cut(s)	998
BssT1I	CCWWGG	1 cut(s)	1384
Bst1107I	GTATAC	1 cut(s)	846
Bst2UI	CCWGG	2 cut(s)	1247, 1661
Bst4CI	ACNGT	3 cut(s)	333, 556, 1582
Bst6I	CTCTTC	1 cut(s)	954
BstACI	GRCGYC	1 cut(s)	998
BstAFI	CTTAAG	1 cut(s)	458
BstAPI	GCANNNNNTGC	2 cut(s)	516, 1690
BstAUI	TGTACA	1 cut(s)	1084
BstC8I	GCNNGC	6 cut(s)	325, 484, 517, 521, 1142, 1487
BstDEI	CTNAG	3 cut(s)	1505, 1680, 1791
BstF5I	GGATG	6 cut(s)	377, 1097, 1424, 1656, 1669, 1831
BstKTI	GATC	5 cut(s)	13, 88, 491, 1201, 1771
BstMAI	GTCTC	2 cut(s)	1343, 1347
BstMBI	GATC	5 cut(s)	10, 85, 488, 1198, 1768
BstMWI	GCNNNNNNNGC	3 cut(s)	516, 1271, 1690
BstNI	CCWGG	2 cut(s)	1247, 1661
BstNSI	RCATGY	3 cut(s)	523, 527, 1058
BstSCI	CCNGG	2 cut(s)	1245, 1659
BstSFI	CTRYAG	1 cut(s)	309
BstSLI	GKGCMC	1 cut(s)	624
BstV1I	GCAGC	2 cut(s)	295, 1056
BstXI	CCANNNNNNTGG	1 cut(s)	298
BstZ17I	GTATAC	1 cut(s)	846
BsuRI	GGCC	1 cut(s)	1570
BtrI	CACGTC	1 cut(s)	1211
BtsCI	GGATG	6 cut(s)	377, 1097, 1424, 1656, 1669, 1831
BtsI	GCAGTG	1 cut(s)	1776
BtsIMutI	CAGTG	2 cut(s)	1344, 1776
Cac8I	GCNNGC	6 cut(s)	325, 484, 517, 521, 1142, 1487
CciI	TCATGA	2 cut(s)	232, 583
Cfr13I	GGNCC	7 cut(s)	53, 333, 387, 1358, 1459, 1541, 1568
CseI	GACGC	1 cut(s)	1794
Csp6I	GTAC	4 cut(s)	561, 724, 1085, 1442
CviQI	GTAC	4 cut(s)	561, 724, 1085, 1442
DdeI	CTNAG	3 cut(s)	1505, 1680, 1791
DpnI	GATC	5 cut(s)	12, 87, 490, 1200, 1770
DpnII	GATC	5 cut(s)	10, 85, 488, 1198, 1768
DriI	GACNNNNNGTC	1 cut(s)	1356
Eam1104I	CTCTTC	1 cut(s)	954
Eam1105I	GACNNNNNGTC	1 cut(s)	1356
EarI	CTCTTC	1 cut(s)	954
Ecl136II	GAGCTC	2 cut(s)	1509, 1517
Eco130I	CCWWGG	1 cut(s)	1384
Eco24I	GRGCYC	2 cut(s)	1511, 1519
Eco47I	GGWCC	6 cut(s)	53, 333, 387, 1358, 1459, 1541
Eco53kI	GAGCTC	2 cut(s)	1509, 1517
Eco57I	CTGAAG	1 cut(s)	939
Eco88I	CYCGRG	1 cut(s)	1510
EcoICRI	GAGCTC	2 cut(s)	1509, 1517
EcoO109I	RGGNCCY	1 cut(s)	1459
EcoRI	GAATTC	1 cut(s)	1031
EcoRII	CCWGG	2 cut(s)	1245, 1659
EcoT14I	CCWWGG	1 cut(s)	1384
EcoT22I	ATGCAT	1 cut(s)	525
EcoT38I	GRGCYC	2 cut(s)	1511, 1519
ErhI	CCWWGG	1 cut(s)	1384
FaqI	GGGAC	2 cut(s)	400, 1797
FauI	CCCGC	1 cut(s)	1774
FauNDI	CATATG	1 cut(s)	1620
FblI	GTMKAC	2 cut(s)	845, 1051
Fnu4HI	GCNGC	2 cut(s)	309, 1070
FokI	GGATG	6 cut(s)	384, 1084, 1411, 1643, 1676, 1818
FriOI	GRGCYC	2 cut(s)	1511, 1519
Fsp4HI	GCNGC	2 cut(s)	309, 1070
FspBI	CTAG	6 cut(s)	57, 324, 402, 483, 1179, 1526
GluI	GCNGC	2 cut(s)	309, 1070
GsaI	CCCAGC	1 cut(s)	1634
GsuI	CTGGAG	3 cut(s)	102, 438, 1329
HaeIII	GGCC	1 cut(s)	1570
HapII	CCGG	2 cut(s)	673, 735
HgaI	GACGC	1 cut(s)	1794
Hin1I	GRCGYC	1 cut(s)	998
HindIII	AAGCTT	3 cut(s)	264, 772, 1284
HinfI	GANTC	9 cut(s)	32, 251, 443, 930, 964, 1175, 1351, 1451, 1795
HpaII	CCGG	2 cut(s)	673, 735
HphI	GGTGA	4 cut(s)	759, 807, 893, 1238
Hpy166II	GTNNAC	5 cut(s)	846, 1052, 1085, 1087, 1776
Hpy188I	TCNGA	7 cut(s)	216, 1003, 1323, 1450, 1456, 1718, 1794
Hpy8I	GTNNAC	5 cut(s)	846, 1052, 1085, 1087, 1776
Hpy99I	CGWCG	2 cut(s)	333, 1212
HpyAV	CCTTC	5 cut(s)	33, 283, 528, 1226, 1367
HpyCH4III	ACNGT	3 cut(s)	333, 556, 1582
HpyCH4IV	ACGT	4 cut(s)	998, 1117, 1189, 1210
HpyF10VI	GCNNNNNNNGC	3 cut(s)	516, 1271, 1690
HpyF3I	CTNAG	3 cut(s)	1505, 1680, 1791
HpySE526I	ACGT	4 cut(s)	998, 1117, 1189, 1210
Hsp92I	GRCGYC	1 cut(s)	998
Kpn2I	TCCGGA	1 cut(s)	672
Kzo9I	GATC	5 cut(s)	10, 85, 488, 1198, 1768
LmnI	GCTCC	2 cut(s)	217, 1522
Lsp1109I	GCAGC	2 cut(s)	295, 1056
LweI	GCATC	8 cut(s)	175, 349, 350, 362, 1120, 1464, 1654, 1817
MaeI	CTAG	6 cut(s)	57, 324, 402, 483, 1179, 1526
MaeII	ACGT	4 cut(s)	998, 1117, 1189, 1210
MaeIII	GTNAC	7 cut(s)	103, 765, 899, 1190, 1253, 1388, 1532
MalI	GATC	5 cut(s)	12, 87, 490, 1200, 1770
MboI	GATC	5 cut(s)	10, 85, 488, 1198, 1768
MboII	GAAGA	7 cut(s)	83, 272, 690, 932, 971, 1292, 1760
MfeI	CAATTG	1 cut(s)	1637
MhlI	GDGCHC	4 cut(s)	579, 624, 1511, 1519
MlyI	GAGTC	3 cut(s)	1184, 1345, 1460
MmeI	TCCRAC	1 cut(s)	1100
Mph1103I	ATGCAT	1 cut(s)	525
MroI	TCCGGA	1 cut(s)	672
MseI	TTAA	8 cut(s)	318, 459, 528, 570, 638, 861, 1112, 1574
MslI	CAYNNNNRTG	2 cut(s)	582, 1472
MspCI	CTTAAG	1 cut(s)	458
MspI	CCGG	2 cut(s)	673, 735
MspR9I	CCNGG	2 cut(s)	1247, 1661
MunI	CAATTG	1 cut(s)	1637
Mva1269I	GAATGC	1 cut(s)	214
MvaI	CCWGG	2 cut(s)	1247, 1661
MwoI	GCNNNNNNNGC	3 cut(s)	516, 1271, 1690
NdeI	CATATG	1 cut(s)	1620
NdeII	GATC	5 cut(s)	10, 85, 488, 1198, 1768
NheI	GCTAGC	2 cut(s)	323, 482
NlaIV	GGNNCC	2 cut(s)	388, 1569
NmuCI	GTSAC	2 cut(s)	765, 899
NsiI	ATGCAT	1 cut(s)	525
NspI	RCATGY	3 cut(s)	523, 527, 1058
PaeI	GCATGC	1 cut(s)	523
PaeR7I	CTCGAG	1 cut(s)	1510
PagI	TCATGA	2 cut(s)	232, 583
PciI	ACATGT	1 cut(s)	1054
PcsI	WCGNNNNNNNCGW	2 cut(s)	475, 484
PctI	GAATGC	1 cut(s)	214
PfeI	GAWTC	6 cut(s)	32, 251, 443, 930, 964, 1795
PfoI	TCCNGGA	1 cut(s)	1659
PkrI	GCNGC	2 cut(s)	310, 1071
PleI	GAGTC	3 cut(s)	1183, 1345, 1459
PpsI	GAGTC	3 cut(s)	1183, 1345, 1459
PpuMI	RGGWCCY	1 cut(s)	1459
PscI	ACATGT	1 cut(s)	1054
Psp124BI	GAGCTC	2 cut(s)	1511, 1519
Psp1406I	AACGTT	2 cut(s)	1117, 1189
Psp5II	RGGWCCY	1 cut(s)	1459
Psp6I	CCWGG	2 cut(s)	1245, 1659
PspFI	CCCAGC	1 cut(s)	1630
PspGI	CCWGG	2 cut(s)	1245, 1659
PspN4I	GGNNCC	2 cut(s)	388, 1569
PspPI	GGNCC	7 cut(s)	53, 333, 387, 1358, 1459, 1541, 1568
PspPPI	RGGWCCY	1 cut(s)	1459
PsrI	GAACNNNNNNTAC	2 cut(s)	96, 128
PstI	CTGCAG	1 cut(s)	313
RsaI	GTAC	4 cut(s)	562, 725, 1086, 1443
RsaNI	GTAC	4 cut(s)	561, 724, 1085, 1442
RseI	CAYNNNNRTG	2 cut(s)	582, 1472
SacI	GAGCTC	2 cut(s)	1511, 1519
SaqAI	TTAA	8 cut(s)	318, 459, 528, 570, 638, 861, 1112, 1574
SatI	GCNGC	2 cut(s)	309, 1070
Sau3AI	GATC	5 cut(s)	10, 85, 488, 1198, 1768
Sau96I	GGNCC	7 cut(s)	53, 333, 387, 1358, 1459, 1541, 1568
SchI	GAGTC	3 cut(s)	1184, 1345, 1460
ScrFI	CCNGG	2 cut(s)	1247, 1661
SduI	GDGCHC	4 cut(s)	579, 624, 1511, 1519
SfaNI	GCATC	8 cut(s)	175, 349, 350, 362, 1120, 1464, 1654, 1817
SfcI	CTRYAG	1 cut(s)	309
Sfr274I	CTCGAG	1 cut(s)	1510
SinI	GGWCC	6 cut(s)	53, 333, 387, 1358, 1459, 1541
SlaI	CTCGAG	1 cut(s)	1510
SmiMI	CAYNNNNRTG	2 cut(s)	582, 1472
SmlI	CTYRAG	3 cut(s)	458, 1510, 1588
SmoI	CTYRAG	3 cut(s)	458, 1510, 1588
SpeI	ACTAGT	1 cut(s)	401
SphI	GCATGC	1 cut(s)	523
SsiI	CCGC	1 cut(s)	1781
SspI	AATATT	4 cut(s)	858, 1093, 1261, 1420
SspMI	CTAG	6 cut(s)	57, 324, 402, 483, 1179, 1526
SstI	GAGCTC	2 cut(s)	1511, 1519
StyD4I	CCNGG	2 cut(s)	1245, 1659
StyI	CCWWGG	1 cut(s)	1384
TaaI	ACNGT	3 cut(s)	333, 556, 1582
TaiI	ACGT	4 cut(s)	1001, 1120, 1192, 1213
TaqI	TCGA	6 cut(s)	88, 616, 943, 1163, 1511, 1826
TatI	WGTACW	2 cut(s)	560, 1084
TfiI	GAWTC	6 cut(s)	32, 251, 443, 930, 964, 1795
Tru1I	TTAA	8 cut(s)	318, 459, 528, 570, 638, 861, 1112, 1574
Tru9I	TTAA	8 cut(s)	318, 459, 528, 570, 638, 861, 1112, 1574
TscAI	CASTG	2 cut(s)	1344, 1783
TseFI	GTSAC	2 cut(s)	765, 899
TseI	GCWGC	2 cut(s)	308, 1069
Tsp45I	GTSAC	2 cut(s)	765, 899
TspGWI	ACGGA	1 cut(s)	252
TspRI	CASTG	2 cut(s)	1344, 1783
Vha464I	CTTAAG	1 cut(s)	458
VpaK11BI	GGWCC	6 cut(s)	53, 333, 387, 1358, 1459, 1541
XapI	RAATTY	6 cut(s)	166, 350, 365, 588, 866, 1031
XbaI	TCTAGA	1 cut(s)	1178
XceI	RCATGY	3 cut(s)	523, 527, 1058
XhoI	CTCGAG	1 cut(s)	1510
XmiI	GTMKAC	2 cut(s)	845, 1051
XspI	CTAG	6 cut(s)	57, 324, 402, 483, 1179, 1526
ZraI	GACGTC	1 cut(s)	999
Zsp2I	ATGCAT	1 cut(s)	525

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.