Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0012222

Physical Location & Seq

Genomic Coordinates Reverse (-)

18916397 .. 18920525

Gene Structure 4129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g26080.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGTGGCCAGGAAGAAGCATTACAGGCCTGCCGGCAAGAAAAAGGAAGGAAACGCCGCCAGGTTCGTCACCAGGTCCCAAGCCGTAAAGCAACTCCAAGTCAATCTCCCCCTCTTCAGGAAACTATGCATTCTGAAGGGGATATTCCCTCGGGAGCCGAAGAAGAAGGTGAAGGGAAATCACCATACTTACTATCACTTGAAGGATGTTTCCTTCATTCAGCATGACCCGCTGGTCCAGCAGATGAGGGACATCAGGGCATATGGAAAGAAAGTAAAGAAAGCCGAGGCCAAGAAGAACAAGGACCGCGCTGTTATTCTTAAGCAGAGAAGACCCACTTACAAATTAGATCATGTCATTTTGCAGAGGTATCCGACGTTCATCGATGCGCTAAGAGATTTGGATGACTGTCTCACAATGGTTCACCTCTTTGCGTGCTTACCTGCTATAGAGGATAGAATTGAAGTGAAACGCATCCAAAACTGTCGGAGGATGAGCCATGAATGGCAAGCTTTTATATCCCGGACTCATAAATTGCGCAAAGTCTTTGTATCTGTTAAAGGCATATATTATCAGGCCGAGGTAAAGGGGCAATTGATTACATGGTTGACTCCTCACCCTTTGCAGCAAGTTTTGACTGAAGATATTGACTTCAATATCATGTTAAACTTTTTGGAGTTTTACGAGGCTCTTCTTGCTTTTGTGAATTGTCATTTATATCGTTCCATAAATGTGAAGTATCCACCAATTCTTGATCCTCGATTGGAAGCGTTTGCAGCTGAACTATATGCACTATCAAGATACTTCGATGCAAGTTCTCTGTCCTCTGAGTTGGATCCTCAGGTTTCAAGTTTGCCTGGAACTGGTAAAGTTGCTGAGTCTGAATTAAGACTTGCCCAACTTCAGCATCAGCTACCTTCCAATGAACCTGGTGCATTGATGGGCCTGGTTGAAAATGTTCCTGGAGAGGACGAAGAGGATAATGATACAATGGTGTGTAAGGGACTCTTCAAGGATATGAAATTTTTCTTGAACCGTGAGGTTAACAGAGAATCATTACTGTTTGTGATTCCTGCATTTGGTGGGATTGTGTCCTGGAAAGGTGATGGCGCTCCATTTGAAGAAGATGATAACGGCGTCACCCATCAGATTGTTGACAGGCCATTGCAGCATGAGCTATGTGAAGGAAGAAAATATGTTCAACCACAGTGGGTTTATGATTGTGTAAATGCCAAGAAAATTCTTCCTACTCGGGATTATTTGGCGGGACGAGAACTTCCCCCACATTTGTCACCTTTTGTCGACCCGAAAGAAGAAGGTTATGTTCCGGACTATGCATTGAAAATTGAACAATGGAAGGCTGCTGAAATCCTCCCGCTTCCAGATGTCGGAAAAGAAGATTTGGAAGATCCTCAGGATATTGCCGACATTGAGAAAGCAAAAGAAGCTGCAAAGAATGAGAAGAAGCTGAAGGCTCTTCAGGAGAAGTACTTCGAGGGATTAAAAGAAGAAATTAAGGGTGTCCCTGCTTCATCCTCCATTTCAAAAACAGATAATCAGATTTCTGCCAAGTCAACTGAGGACAGGGAAGAATCGGATCCTGATTATGAACAAATTGCCAGGGATAATGATGAACGTCATCTAAAACTTATGACCAAGAAAAAGAGGGGTCTTTATGATGCCATGAAGAAAGGCAAGGAACGAAAGCAGGAGAACGTTGAGGTTATCAAAAAACGGAAGAGAAACCTAAAAGCATCCCAAAAAACAAGGGATGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

593

Amino Acids

68.32

Weight (kDa)

9.01

Isoelectric Point (pI)

46.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pescadillo_N	PF06732	13 - 269	3.6e-109	Pescadillo N-terminus
BRCT_2	PF16589	336 - 420	9.3e-09	BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14520
fragaria_vesca	FvH4_3g26080 FvH4_3g26080 FvH4_3g26080
malus_domestica	MD09G1027600.v1.1 MD17G1027600.v1.1
prunus_persica	Prupe.3G291100_v2.0.a1
pyrus_communis	pycom111g02170 pycom17g02260
rosa_chinensis	RchiOBHm_Chr5g0047391
rosa_laevigata	RLG00000034492
rosa_multiflora	Rmu_sc0000580.1_g000062 Rmu_sc0003441.1_g000056
rosa_roxburghii	Rroxscaffold_1G00034010
rosa_rugosa	Rorug05G0236100
rosa_samantha	Rh5AG314900 Rh5CG350800 Rh5DG334700
rosa_wichuraiana	Rw5G029430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	233
Acc16I	TGCGCA	1 cut(s)	539
Acc36I	ACCTGC	1 cut(s)	451
AccI	GTMKAC	1 cut(s)	1302
AccII	CGCG	1 cut(s)	309
AccIII	TCCGGA	1 cut(s)	1327
AciI	CCGC	5 cut(s)	57, 230, 307, 1265, 1376
AclI	AACGTT	1 cut(s)	1716
AclWI	GGATC	6 cut(s)	749, 830, 843, 1403, 1592, 1605
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	2 cut(s)	1022, 1239
AcuI	CTGAAG	6 cut(s)	100, 155, 660, 887, 1463, 1490
AcyI	GRCGYC	1 cut(s)	1137
AfaI	GTAC	1 cut(s)	1490
AfiI	CCNNNNNNNGG	4 cut(s)	117, 863, 1079, 1388
AflII	CTTAAG	1 cut(s)	320
AjnI	CCWGG	9 cut(s)	8, 59, 71, 856, 928, 945, 961, 1094, 1619
AluBI	AGCT	6 cut(s)	512, 779, 913, 1177, 1448, 1468
AluI	AGCT	6 cut(s)	512, 779, 913, 1177, 1448, 1468
Alw26I	GTCTC	1 cut(s)	416
AlwI	GGATC	6 cut(s)	749, 830, 843, 1403, 1592, 1605
Ama87I	CYCGRG	2 cut(s)	150, 1251
Aor13HI	TCCGGA	1 cut(s)	1327
AoxI	GGCC	6 cut(s)	6, 26, 288, 576, 943, 1160
ApeKI	GCWGC	5 cut(s)	625, 776, 1168, 1361, 1448
ApoI	RAATTY	2 cut(s)	1022, 1239
Asp700I	GAANNNNTTC	3 cut(s)	957, 1025, 1490
AspLEI	GCGC	4 cut(s)	311, 391, 540, 1112
AspS9I	GGNCC	4 cut(s)	75, 235, 304, 943
AsuC2I	CCSGG	1 cut(s)	523
AsuHPI	GGTGA	8 cut(s)	61, 173, 181, 416, 608, 1115, 1132, 1284
AvaI	CYCGRG	2 cut(s)	150, 1251
AvaII	GGWCC	3 cut(s)	75, 235, 304
AxyI	CCTNAGG	2 cut(s)	840, 1413
BaeI	ACNNNNGTAYC	2 cut(s)	978, 1011
BalI	TGGCCA	1 cut(s)	8
BamHI	GGATCC	2 cut(s)	835, 1597
BarI	GAAGNNNNNNTAC	1 cut(s)	37
BbsI	GAAGAC	1 cut(s)	337
BbvI	GCAGC	5 cut(s)	637, 788, 1180, 1348, 1435
BccI	CCATC	4 cut(s)	934, 1100, 1152, 1766
BceAI	ACGGC	2 cut(s)	68, 1150
BciT130I	CCWGG	9 cut(s)	10, 61, 73, 858, 930, 947, 963, 1096, 1621
BciVI	GTATCC	2 cut(s)	381, 750
BcnI	CCSGG	1 cut(s)	523
BcoDI	GTCTC	1 cut(s)	416
BfmI	CTRYAG	1 cut(s)	447
BfoI	RGCGCY	1 cut(s)	1113
BfrI	CTTAAG	1 cut(s)	320
BfuAI	ACCTGC	1 cut(s)	451
BfuI	GTATCC	2 cut(s)	381, 750
BisI	GCNGC	6 cut(s)	57, 626, 777, 1169, 1362, 1449
BlsI	GCNGC	6 cut(s)	58, 627, 778, 1170, 1363, 1450
BmcAI	AGTACT	1 cut(s)	1490
Bme18I	GGWCC	3 cut(s)	75, 235, 304
BmeT110I	CYCGRG	2 cut(s)	150, 1251
BmgT120I	GGNCC	4 cut(s)	75, 235, 304, 943
BmiI	GGNNCC	4 cut(s)	77, 156, 837, 1599
BmsI	GCATC	6 cut(s)	376, 483, 799, 916, 1669, 1763
BpiI	GAAGAC	1 cut(s)	337
BpmI	CTGGAG	1 cut(s)	984
BpuMI	CCSGG	1 cut(s)	523
Bsa29I	ATCGAT	1 cut(s)	384
BsaHI	GRCGYC	1 cut(s)	1137
BsaJI	CCNNGG	4 cut(s)	149, 285, 579, 1620
BsaWI	WCCGGW	1 cut(s)	1327
Bsc4I	CCNNNNNNNGG	4 cut(s)	117, 863, 1079, 1388
Bse118I	RCCGGY	1 cut(s)	32
Bse1I	ACTGG	1 cut(s)	868
Bse21I	CCTNAGG	2 cut(s)	840, 1413
Bse3DI	GCAATG	1 cut(s)	1163
BseAI	TCCGGA	1 cut(s)	1327
BseBI	CCWGG	9 cut(s)	10, 61, 73, 858, 930, 947, 963, 1096, 1621
BseCI	ATCGAT	1 cut(s)	384
BseDI	CCNNGG	4 cut(s)	149, 285, 579, 1620
BseGI	GGATG	7 cut(s)	211, 409, 474, 498, 1532, 1754, 1777
BseLI	CCNNNNNNNGG	4 cut(s)	117, 863, 1079, 1388
BseMI	GCAATG	1 cut(s)	1163
BseMII	CTCAG	5 cut(s)	819, 854, 867, 1427, 1569
BseNI	ACTGG	1 cut(s)	868
BseRI	GAGGAG	1 cut(s)	603
BseXI	GCAGC	5 cut(s)	637, 788, 1180, 1348, 1435
Bsh1236I	CGCG	1 cut(s)	309
BshFI	GGCC	6 cut(s)	8, 28, 290, 578, 945, 1162
BshVI	ATCGAT	1 cut(s)	384
BsiHKCI	CYCGRG	2 cut(s)	150, 1251
BsiSI	CCGG	3 cut(s)	33, 523, 1328
BslFI	GGGAC	5 cut(s)	61, 263, 1017, 1281, 1508
BslI	CCNNNNNNNGG	4 cut(s)	117, 863, 1079, 1388
BsmAI	GTCTC	1 cut(s)	416
BsmFI	GGGAC	5 cut(s)	61, 263, 1017, 1281, 1508
BsmI	GAATGC	1 cut(s)	129
BsnI	GGCC	6 cut(s)	8, 28, 290, 578, 945, 1162
BsoBI	CYCGRG	2 cut(s)	150, 1251
Bsp13I	TCCGGA	1 cut(s)	1327
Bsp143I	GATC	5 cut(s)	349, 754, 835, 1408, 1597
BspACI	CCGC	5 cut(s)	57, 230, 307, 1265, 1376
BspANI	GGCC	6 cut(s)	8, 28, 290, 578, 945, 1162
BspCNI	CTCAG	5 cut(s)	820, 853, 868, 1426, 1570
BspDI	ATCGAT	1 cut(s)	384
BspEI	TCCGGA	1 cut(s)	1327
BspFNI	CGCG	1 cut(s)	309
BspLI	GGNNCC	4 cut(s)	77, 156, 837, 1599
BspMI	ACCTGC	1 cut(s)	451
BspPI	GGATC	6 cut(s)	749, 830, 843, 1403, 1592, 1605
BspQI	GCTCTTC	2 cut(s)	696, 1482
BspTI	CTTAAG	1 cut(s)	320
BsrDI	GCAATG	1 cut(s)	1163
BsrFI	RCCGGY	1 cut(s)	32
BsrI	ACTGG	1 cut(s)	868
BssAI	RCCGGY	1 cut(s)	32
BssECI	CCNNGG	4 cut(s)	149, 285, 579, 1620
BssMI	GATC	5 cut(s)	349, 754, 835, 1408, 1597
BssNI	GRCGYC	1 cut(s)	1137
Bst2UI	CCWGG	9 cut(s)	10, 61, 73, 858, 930, 947, 963, 1096, 1621
Bst4CI	ACNGT	5 cut(s)	410, 485, 1037, 1062, 1209
Bst6I	CTCTTC	6 cut(s)	119, 696, 969, 1013, 1482, 1733
BstACI	GRCGYC	1 cut(s)	1137
BstAFI	CTTAAG	1 cut(s)	320
BstC8I	GCNNGC	4 cut(s)	30, 34, 436, 510
BstDEI	CTNAG	6 cut(s)	392, 828, 840, 876, 1413, 1578
BstF5I	GGATG	7 cut(s)	211, 409, 474, 498, 1532, 1754, 1777
BstFNI	CGCG	1 cut(s)	309
BstH2I	RGCGCY	1 cut(s)	1113
BstHHI	GCGC	4 cut(s)	311, 391, 540, 1112
BstKTI	GATC	5 cut(s)	352, 757, 838, 1411, 1600
BstMAI	GTCTC	1 cut(s)	416
BstMBI	GATC	5 cut(s)	349, 754, 835, 1408, 1597
BstMWI	GCNNNNNNNGC	8 cut(s)	25, 229, 238, 695, 776, 1168, 1174, 1445
BstNI	CCWGG	9 cut(s)	10, 61, 73, 858, 930, 947, 963, 1096, 1621
BstSFI	CTRYAG	1 cut(s)	447
BstUI	CGCG	1 cut(s)	309
BstV1I	GCAGC	5 cut(s)	637, 788, 1180, 1348, 1435
BstV2I	GAAGAC	1 cut(s)	337
BstX2I	RGATCY	3 cut(s)	835, 1408, 1597
BstYI	RGATCY	3 cut(s)	835, 1408, 1597
Bsu15I	ATCGAT	1 cut(s)	384
Bsu36I	CCTNAGG	2 cut(s)	840, 1413
BsuI	GTATCC	2 cut(s)	381, 750
BsuRI	GGCC	6 cut(s)	8, 28, 290, 578, 945, 1162
BsuTUI	ATCGAT	1 cut(s)	384
BtsCI	GGATG	7 cut(s)	211, 409, 474, 498, 1532, 1754, 1777
BtsIMutI	CAGTG	1 cut(s)	1214
BveI	ACCTGC	1 cut(s)	451
Cac8I	GCNNGC	4 cut(s)	30, 34, 436, 510
CfoI	GCGC	4 cut(s)	311, 391, 540, 1112
Cfr10I	RCCGGY	1 cut(s)	32
Cfr13I	GGNCC	4 cut(s)	75, 235, 304, 943
ClaI	ATCGAT	1 cut(s)	384
CseI	GACGC	1 cut(s)	1126
CsiI	ACCWGGT	2 cut(s)	71, 928
Csp6I	GTAC	1 cut(s)	1489
CspCI	CAANNNNNGTGG	2 cut(s)	1190, 1225
CviAII	CATG	7 cut(s)	224, 353, 500, 603, 661, 1172, 1684
CviQI	GTAC	1 cut(s)	1489
DdeI	CTNAG	6 cut(s)	392, 828, 840, 876, 1413, 1578
DpnI	GATC	5 cut(s)	351, 756, 837, 1410, 1599
DpnII	GATC	5 cut(s)	349, 754, 835, 1408, 1597
DrdI	GACNNNNNNGTC	1 cut(s)	233
DseDI	GACNNNNNNGTC	1 cut(s)	233
EaeI	YGGCCR	1 cut(s)	6
Eam1104I	CTCTTC	6 cut(s)	119, 696, 969, 1013, 1482, 1733
EarI	CTCTTC	6 cut(s)	119, 696, 969, 1013, 1482, 1733
Eco147I	AGGCCT	1 cut(s)	28
Eco47I	GGWCC	3 cut(s)	75, 235, 304
Eco57I	CTGAAG	6 cut(s)	100, 155, 660, 887, 1463, 1490
Eco81I	CCTNAGG	2 cut(s)	840, 1413
Eco88I	CYCGRG	2 cut(s)	150, 1251
EcoO109I	RGGNCCY	1 cut(s)	75
EcoRII	CCWGG	9 cut(s)	8, 59, 71, 856, 928, 945, 961, 1094, 1619
EcoT22I	ATGCAT	2 cut(s)	131, 1339
FaeI	CATG	7 cut(s)	227, 356, 503, 606, 664, 1175, 1687
FalI	AAGNNNNNCTT	4 cut(s)	322, 354, 992, 1024
FaqI	GGGAC	5 cut(s)	61, 263, 1017, 1281, 1508
FatI	CATG	7 cut(s)	223, 352, 499, 602, 660, 1171, 1683
FauI	CCCGC	3 cut(s)	237, 1258, 1383
FauNDI	CATATG	1 cut(s)	262
FblI	GTMKAC	1 cut(s)	1302
Fnu4HI	GCNGC	6 cut(s)	57, 626, 777, 1169, 1362, 1449
FokI	GGATG	6 cut(s)	218, 416, 461, 505, 1519, 1741
Fsp4HI	GCNGC	6 cut(s)	57, 626, 777, 1169, 1362, 1449
FspI	TGCGCA	1 cut(s)	539
GlaI	GCGC	4 cut(s)	310, 390, 539, 1111
GluI	GCNGC	6 cut(s)	57, 626, 777, 1169, 1362, 1449
GsuI	CTGGAG	1 cut(s)	984
HaeII	RGCGCY	1 cut(s)	1113
HaeIII	GGCC	6 cut(s)	8, 28, 290, 578, 945, 1162
HapII	CCGG	3 cut(s)	33, 523, 1328
HgaI	GACGC	1 cut(s)	1126
HhaI	GCGC	4 cut(s)	311, 391, 540, 1112
Hin1I	GRCGYC	1 cut(s)	1137
Hin1II	CATG	7 cut(s)	227, 356, 503, 606, 664, 1175, 1687
Hin6I	GCGC	4 cut(s)	309, 389, 538, 1110
HinP1I	GCGC	4 cut(s)	309, 389, 538, 1110
HincII	GTYRAC	5 cut(s)	609, 1045, 1156, 1303, 1575
HindII	GTYRAC	5 cut(s)	609, 1045, 1156, 1303, 1575
HindIII	AAGCTT	1 cut(s)	510
HinfI	GANTC	7 cut(s)	526, 610, 878, 1005, 1052, 1069, 1592
HpaI	GTTAAC	1 cut(s)	1045
HpaII	CCGG	3 cut(s)	33, 523, 1328
HphI	GGTGA	8 cut(s)	61, 173, 181, 416, 608, 1115, 1132, 1284
Hpy166II	GTNNAC	6 cut(s)	424, 609, 1045, 1156, 1303, 1575
Hpy188I	TCNGA	9 cut(s)	135, 375, 489, 829, 883, 1149, 1391, 1560, 1597
Hpy8I	GTNNAC	6 cut(s)	424, 609, 1045, 1156, 1303, 1575
Hpy99I	CGWCG	1 cut(s)	379
HpyCH4III	ACNGT	5 cut(s)	410, 485, 1037, 1062, 1209
HpyCH4IV	ACGT	3 cut(s)	377, 1636, 1716
HpyF10VI	GCNNNNNNNGC	8 cut(s)	25, 229, 238, 695, 776, 1168, 1174, 1445
HpyF3I	CTNAG	6 cut(s)	392, 828, 840, 876, 1413, 1578
HpySE526I	ACGT	3 cut(s)	377, 1636, 1716
Hsp92I	GRCGYC	1 cut(s)	1137
Hsp92II	CATG	7 cut(s)	227, 356, 503, 606, 664, 1175, 1687
HspAI	GCGC	4 cut(s)	309, 389, 538, 1110
Kpn2I	TCCGGA	1 cut(s)	1327
KroI	GCCGGC	1 cut(s)	32
KroNI	GCCGGC	1 cut(s)	34
KspAI	GTTAAC	1 cut(s)	1045
Kzo9I	GATC	5 cut(s)	349, 754, 835, 1408, 1597
LguI	GCTCTTC	2 cut(s)	696, 1482
LmnI	GCTCC	2 cut(s)	154, 1117
Lsp1109I	GCAGC	5 cut(s)	637, 788, 1180, 1348, 1435
LweI	GCATC	6 cut(s)	376, 483, 799, 916, 1669, 1763
MabI	ACCWGGT	2 cut(s)	71, 928
MaeII	ACGT	3 cut(s)	377, 1636, 1716
MaeIII	GTNAC	3 cut(s)	67, 1138, 1290
MalI	GATC	5 cut(s)	351, 756, 837, 1410, 1599
MboI	GATC	5 cut(s)	349, 754, 835, 1408, 1597
MfeI	CAATTG	1 cut(s)	593
MflI	RGATCY	3 cut(s)	835, 1408, 1597
MlsI	TGGCCA	1 cut(s)	8
MluNI	TGGCCA	1 cut(s)	8
MlyI	GAGTC	4 cut(s)	520, 604, 887, 999
MmeI	TCCRAC	4 cut(s)	398, 467, 813, 1369
Mox20I	TGGCCA	1 cut(s)	8
Mph1103I	ATGCAT	2 cut(s)	131, 1339
MroI	TCCGGA	1 cut(s)	1327
MroNI	GCCGGC	1 cut(s)	32
MroXI	GAANNNNTTC	3 cut(s)	957, 1025, 1490
MscI	TGGCCA	1 cut(s)	8
MseI	TTAA	7 cut(s)	321, 558, 665, 887, 1044, 1502, 1515
MslI	CAYNNNNRTG	1 cut(s)	731
Msp20I	TGGCCA	1 cut(s)	8
MspA1I	CMGCKG	2 cut(s)	232, 779
MspCI	CTTAAG	1 cut(s)	320
MspI	CCGG	3 cut(s)	33, 523, 1328
MunI	CAATTG	1 cut(s)	593
Mva1269I	GAATGC	1 cut(s)	129
MvaI	CCWGG	9 cut(s)	10, 61, 73, 858, 930, 947, 963, 1096, 1621
MvnI	CGCG	1 cut(s)	309
MwoI	GCNNNNNNNGC	8 cut(s)	25, 229, 238, 695, 776, 1168, 1174, 1445
NaeI	GCCGGC	1 cut(s)	34
NciI	CCSGG	1 cut(s)	523
NdeI	CATATG	1 cut(s)	262
NdeII	GATC	5 cut(s)	349, 754, 835, 1408, 1597
NgoMIV	GCCGGC	1 cut(s)	32
NlaIII	CATG	7 cut(s)	227, 356, 503, 606, 664, 1175, 1687
NlaIV	GGNNCC	4 cut(s)	77, 156, 837, 1599
NmeAIII	GCCGAG	2 cut(s)	310, 604
NmuCI	GTSAC	3 cut(s)	67, 1138, 1290
NsbI	TGCGCA	1 cut(s)	539
NsiI	ATGCAT	2 cut(s)	131, 1339
PceI	AGGCCT	1 cut(s)	28
PciSI	GCTCTTC	2 cut(s)	696, 1482
PctI	GAATGC	1 cut(s)	129
PdiI	GCCGGC	1 cut(s)	34
PdmI	GAANNNNTTC	3 cut(s)	957, 1025, 1490
PfeI	GAWTC	3 cut(s)	1052, 1069, 1592
PfoI	TCCNGGA	3 cut(s)	521, 961, 1094
PkrI	GCNGC	6 cut(s)	58, 627, 778, 1170, 1363, 1450
PleI	GAGTC	4 cut(s)	520, 604, 886, 999
PpsI	GAGTC	4 cut(s)	520, 604, 886, 999
PpuMI	RGGWCCY	1 cut(s)	75
Psp1406I	AACGTT	1 cut(s)	1716
Psp5II	RGGWCCY	1 cut(s)	75
Psp6I	CCWGG	9 cut(s)	8, 59, 71, 856, 928, 945, 961, 1094, 1619
PspGI	CCWGG	9 cut(s)	8, 59, 71, 856, 928, 945, 961, 1094, 1619
PspN4I	GGNNCC	4 cut(s)	77, 156, 837, 1599
PspPI	GGNCC	4 cut(s)	75, 235, 304, 943
PspPPI	RGGWCCY	1 cut(s)	75
PsrI	GAACNNNNNNTAC	2 cut(s)	362, 394
PsuI	RGATCY	3 cut(s)	835, 1408, 1597
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	1 cut(s)	1490
RsaNI	GTAC	1 cut(s)	1489
RseI	CAYNNNNRTG	1 cut(s)	731
SalI	GTCGAC	1 cut(s)	1301
SapI	GCTCTTC	2 cut(s)	696, 1482
SaqAI	TTAA	7 cut(s)	321, 558, 665, 887, 1044, 1502, 1515
SatI	GCNGC	6 cut(s)	57, 626, 777, 1169, 1362, 1449
Sau3AI	GATC	5 cut(s)	349, 754, 835, 1408, 1597
Sau96I	GGNCC	4 cut(s)	75, 235, 304, 943
ScaI	AGTACT	1 cut(s)	1490
SchI	GAGTC	4 cut(s)	520, 604, 887, 999
SexAI	ACCWGGT	2 cut(s)	71, 928
SfaNI	GCATC	6 cut(s)	376, 483, 799, 916, 1669, 1763
SfcI	CTRYAG	1 cut(s)	447
SinI	GGWCC	3 cut(s)	75, 235, 304
SmiMI	CAYNNNNRTG	1 cut(s)	731
SmlI	CTYRAG	1 cut(s)	320
SmoI	CTYRAG	1 cut(s)	320
SseBI	AGGCCT	1 cut(s)	28
SsiI	CCGC	5 cut(s)	57, 230, 307, 1265, 1376
StuI	AGGCCT	1 cut(s)	28
TaaI	ACNGT	5 cut(s)	410, 485, 1037, 1062, 1209
TaiI	ACGT	3 cut(s)	380, 1639, 1719
TaqI	TCGA	5 cut(s)	384, 760, 807, 1302, 1494
TatI	WGTACW	1 cut(s)	1488
TauI	GCSGC	1 cut(s)	59
TfiI	GAWTC	3 cut(s)	1052, 1069, 1592
Tru1I	TTAA	7 cut(s)	321, 558, 665, 887, 1044, 1502, 1515
Tru9I	TTAA	7 cut(s)	321, 558, 665, 887, 1044, 1502, 1515
TscAI	CASTG	1 cut(s)	1214
TseFI	GTSAC	3 cut(s)	67, 1138, 1290
TseI	GCWGC	5 cut(s)	625, 776, 1168, 1361, 1448
Tsp45I	GTSAC	3 cut(s)	67, 1138, 1290
TspDTI	ATGAA	9 cut(s)	205, 370, 516, 939, 1034, 1521, 1623, 1647, 1700
TspGWI	ACGGA	1 cut(s)	1750
TspRI	CASTG	1 cut(s)	1214
Vha464I	CTTAAG	1 cut(s)	320
VpaK11BI	GGWCC	3 cut(s)	75, 235, 304
XapI	RAATTY	2 cut(s)	1022, 1239
XmiI	GTMKAC	1 cut(s)	1302
XmnI	GAANNNNTTC	3 cut(s)	957, 1025, 1490
ZrmI	AGTACT	1 cut(s)	1490
Zsp2I	ATGCAT	2 cut(s)	131, 1339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.