Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0012222

Physical Location & Seq

Genomic Coordinates Reverse (-)

40451458 .. 40455704

Gene Structure 4247 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG350800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGTGAAGAAGAAGCATTACAGGCCTGCCGGCAAGAAAAAGGAAGGAAACGCGGCCAGGTTCGTCACCAGGTCCCAAGCCGTAAAGCAACTCCAAGTCAATCTTCCCCTCTTCAGGAAACTATGCATTCTGAAGGGTATATTCCCTCGGGAGCCGAAGAAAAAGGTGAAGGGGAATCACCATACGTATTATCACTTGAAGGATGTTTCATTCATTCAACACGAACCGCTGCTCGACAAGATGAGGAATATCAGGGCATATGAAAAGAAAGTAAAGAAAGCCGAGGCAAAGAAGAACAGAGACCGTGCTAATATTCTCAGGCAGAGAAGACCCACTTACAAATTAGATAACGTTATATTGCAGAGGTATCCGAAGTTCATTGATGCATTGAGAGATTTGGATGATTGTCTCACAATGGTTCACCTCTTTGCGGCCTTACCTGCTATAGAGGATAGAATTGACGTGAAACGCATCCATAACTGTCGGAGGATGAGCCATGAATGGCAAGCTTTTATATCTCGGACTCATAAATTGCGCAAAGTCTTTGTATCTGTTAAAGGCATATATTATCAGGCCGAGGTAAAGGGGCAATTGATCACATGGTTGACTCCTCACCCTTTGCAGCAAGTTTTGACTGATGATGTTGACTTCAATATCATGCTAAACTTTTTGGAGTTTTATGAGGCTCTTCTTGCTTTTGTGAATTGTCATTTATATCGTTCCATCAATGTGAAGTATCCACCAATTCTTGATCCTCGATTGGAAGCTTTTGCAGCCGAACTGTATGCACTATCAAGATACTTCGATGCAAGTTCTCGGTCCTCTGTGTTGGATCCTCAGGTTTCAAGTTTGCCTGGATCCAGTAAAGTTGATGAGTCTGAATTAAGACTTGCCCAACTTCAGCATCAGCTTCCTTCCAATGAACCTGGTGCATTGATGGGCCTCGTTGAAAATGTTCCTGGTGAGGATGAAGAGGATAATGATACAATGATGTGTAAGGAACTCTTCAAGGATATGAAATTTTTCTTGAACCGTGAGGTTAACAGAGAATCATTATTGTTTGTGATTCCTGCTTTTGGTGGGATTGTGTCCTGGAAAGGAGATGGAGCTCCATTTGAAGAAGATGATAACAGCATCACCCATCAGATTGTTGACAGGCCATTGCAGCATGAGCTCTGTGAAGGAAGAAAATATGTTCAACCACAGTGGGTTTATGATTGTGTAAATGCCAAGAAAATTCTGCCTACTCGGGATTATTTGGCGGGACGAGAACTTCCCCCACATTTGTCACCTTTTGTTGACCCAAAGGAAGAAGGTTATGTTCCGGACTATGCCTTGAAAATTGAACAATGGAAGGCTTCTGACATCCTCCCACTTCCAGATGTTGGAAAGGAAGATTTGGAAGATCCTCAGAATTTTGCTGACCTAGAAAAAGCAAAAGAAGCTGCAAAGAATGACAAGAAGCTGAAGGCTCTTCAGAAGGAGTATTTTGATGGATTGAAAGTGGAACTTAATGGTGTACCGCCTTCATCCTCCATTTCAAAAACAGAAAATCAGATTTCTGCCAAGGCGACCGAGGACAGGGAAGAATCTGATCCTGATTATGAACAGATTGCCAAGGATAAAGAAGAACTGGAACTACTTACTATTTCCAAGAAAAAGAGGGGTCTATATGAAGCCATGAAGAAAGGCAAGAAACGAAAGCACGACAATGTTGAGGTTATCAAGGAACGGAAGAGAAAACTAAAAGAGTCTCAAAAATCAAGGGATGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000463 GO:0000470 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0010468 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030684 GO:0030686 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904 GO:2000232

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRCT_2 Pescadillo_N

Protein Analysis

591

Amino Acids

68.48

Weight (kDa)

9.03

Isoelectric Point (pI)

45.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pescadillo_N	PF06732	12 - 270	4.3e-109	Pescadillo N-terminus
BRCT_2	PF16589	335 - 419	9.2e-09	BRCT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14520
fragaria_vesca	FvH4_3g26080 FvH4_3g26080 FvH4_3g26080
malus_domestica	MD09G1027600.v1.1 MD17G1027600.v1.1
prunus_persica	Prupe.3G291100_v2.0.a1
pyrus_communis	pycom111g02170 pycom17g02260
rosa_chinensis	RchiOBHm_Chr5g0047391
rosa_laevigata	RLG00000034492
rosa_multiflora	Rmu_sc0000580.1_g000062 Rmu_sc0003441.1_g000056
rosa_roxburghii	Rroxscaffold_1G00034010
rosa_rugosa	Rorug05G0236100
rosa_samantha	Rh5AG314900 Rh5CG350800 Rh5DG334700
rosa_wichuraiana	Rw5G029430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	536
Acc36I	ACCTGC	1 cut(s)	448
AccB7I	CCANNNNNTGG	1 cut(s)	1385
AccII	CGCG	1 cut(s)	53
AccIII	TCCGGA	1 cut(s)	1324
AciI	CCGC	5 cut(s)	53, 227, 431, 1262, 1523
AclI	AACGTT	1 cut(s)	351
AclWI	GGATC	7 cut(s)	746, 827, 840, 852, 865, 1400, 1589
AcoI	YGGCCR	1 cut(s)	54
AcsI	RAATTY	3 cut(s)	1019, 1236, 1414
AcuI	CTGAAG	5 cut(s)	97, 152, 884, 1460, 1487
AfaI	GTAC	1 cut(s)	1521
AfiI	CCNNNNNNNGG	5 cut(s)	114, 430, 1076, 1385, 1581
AjiI	CACGTC	1 cut(s)	463
AjnI	CCWGG	6 cut(s)	56, 68, 853, 925, 958, 1091
AjuI	GAANNNNNNNTTGG	2 cut(s)	87, 119
AluBI	AGCT	7 cut(s)	509, 767, 910, 1109, 1174, 1445, 1465
AluI	AGCT	7 cut(s)	509, 767, 910, 1109, 1174, 1445, 1465
Alw21I	GWGCWC	2 cut(s)	1111, 1176
Alw26I	GTCTC	3 cut(s)	294, 413, 1758
AlwI	GGATC	7 cut(s)	746, 827, 840, 852, 865, 1400, 1589
Ama87I	CYCGRG	2 cut(s)	147, 1248
Aor13HI	TCCGGA	1 cut(s)	1324
AoxI	GGCC	6 cut(s)	23, 54, 432, 573, 940, 1157
ApeKI	GCWGC	5 cut(s)	229, 622, 773, 1165, 1445
ApoI	RAATTY	3 cut(s)	1019, 1236, 1414
Asp700I	GAANNNNTTC	2 cut(s)	954, 1022
AspLEI	GCGC	1 cut(s)	537
AspS9I	GGNCC	3 cut(s)	72, 819, 940
AsuHPI	GGTGA	9 cut(s)	16, 58, 170, 178, 413, 605, 974, 1129, 1281
AvaI	CYCGRG	2 cut(s)	147, 1248
AvaII	GGWCC	2 cut(s)	72, 819
AxyI	CCTNAGG	1 cut(s)	837
BamHI	GGATCC	2 cut(s)	832, 857
BanII	GRGCYC	2 cut(s)	1111, 1176
BarI	GAAGNNNNNNTAC	1 cut(s)	34
BbsI	GAAGAC	1 cut(s)	334
Bbv12I	GWGCWC	2 cut(s)	1111, 1176
BbvI	GCAGC	5 cut(s)	216, 634, 785, 1177, 1432
BccI	CCATC	6 cut(s)	731, 931, 1097, 1149, 1487, 1763
BceAI	ACGGC	1 cut(s)	65
BcgI	CGANNNNNNTGC	2 cut(s)	767, 801
BciT130I	CCWGG	6 cut(s)	58, 70, 855, 927, 960, 1093
BciVI	GTATCC	2 cut(s)	378, 747
BclI	TGATCA	1 cut(s)	594
BcoDI	GTCTC	3 cut(s)	294, 413, 1758
BfaI	CTAG	1 cut(s)	1427
BfmI	CTRYAG	1 cut(s)	444
BfuAI	ACCTGC	1 cut(s)	448
BfuI	GTATCC	2 cut(s)	378, 747
BisI	GCNGC	7 cut(s)	54, 230, 432, 623, 774, 1166, 1446
BlsI	GCNGC	7 cut(s)	55, 231, 433, 624, 775, 1167, 1447
Bme1390I	CCNGG	6 cut(s)	58, 70, 855, 927, 960, 1093
Bme18I	GGWCC	2 cut(s)	72, 819
BmeT110I	CYCGRG	2 cut(s)	147, 1248
BmgBI	CACGTC	1 cut(s)	463
BmgT120I	GGNCC	3 cut(s)	72, 819, 940
BmiI	GGNNCC	4 cut(s)	74, 153, 834, 859
BmrFI	CCNGG	6 cut(s)	58, 70, 855, 927, 960, 1093
BmsI	GCATC	5 cut(s)	373, 480, 796, 913, 1143
BpiI	GAAGAC	1 cut(s)	334
BsaAI	YACGTR	1 cut(s)	186
BsaI	GGTCTC	1 cut(s)	294
BsaJI	CCNNGG	6 cut(s)	146, 282, 576, 1566, 1575, 1617
BsaWI	WCCGGW	1 cut(s)	1324
Bsc4I	CCNNNNNNNGG	5 cut(s)	114, 430, 1076, 1385, 1581
Bse118I	RCCGGY	1 cut(s)	29
Bse1I	ACTGG	2 cut(s)	861, 1638
Bse21I	CCTNAGG	1 cut(s)	837
Bse3DI	GCAATG	1 cut(s)	1160
BseAI	TCCGGA	1 cut(s)	1324
BseBI	CCWGG	6 cut(s)	58, 70, 855, 927, 960, 1093
BseDI	CCNNGG	6 cut(s)	146, 282, 576, 1566, 1575, 1617
BseGI	GGATG	8 cut(s)	208, 406, 471, 495, 973, 1365, 1529, 1774
BseLI	CCNNNNNNNGG	5 cut(s)	114, 430, 1076, 1385, 1581
BseMI	GCAATG	1 cut(s)	1160
BseMII	CTCAG	3 cut(s)	331, 851, 1424
BseNI	ACTGG	2 cut(s)	861, 1638
BseRI	GAGGAG	1 cut(s)	600
BseXI	GCAGC	5 cut(s)	216, 634, 785, 1177, 1432
Bsh1236I	CGCG	1 cut(s)	53
Bsh1285I	CGRYCG	1 cut(s)	1575
BshFI	GGCC	6 cut(s)	25, 56, 434, 575, 942, 1159
BsiEI	CGRYCG	1 cut(s)	1575
BsiHKAI	GWGCWC	2 cut(s)	1111, 1176
BsiHKCI	CYCGRG	2 cut(s)	147, 1248
BsiSI	CCGG	2 cut(s)	30, 1325
BslFI	GGGAC	2 cut(s)	58, 1278
BslI	CCNNNNNNNGG	5 cut(s)	114, 430, 1076, 1385, 1581
BsmAI	GTCTC	3 cut(s)	294, 413, 1758
BsmFI	GGGAC	2 cut(s)	58, 1278
BsmI	GAATGC	1 cut(s)	126
BsnI	GGCC	6 cut(s)	25, 56, 434, 575, 942, 1159
Bso31I	GGTCTC	1 cut(s)	294
BsoBI	CYCGRG	2 cut(s)	147, 1248
Bsp1286I	GDGCHC	2 cut(s)	1111, 1176
Bsp13I	TCCGGA	1 cut(s)	1324
Bsp143I	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
BspACI	CCGC	5 cut(s)	53, 227, 431, 1262, 1523
BspANI	GGCC	6 cut(s)	25, 56, 434, 575, 942, 1159
BspCNI	CTCAG	3 cut(s)	330, 850, 1423
BspEI	TCCGGA	1 cut(s)	1324
BspFNI	CGCG	1 cut(s)	53
BspLI	GGNNCC	4 cut(s)	74, 153, 834, 859
BspMI	ACCTGC	1 cut(s)	448
BspPI	GGATC	7 cut(s)	746, 827, 840, 852, 865, 1400, 1589
BspQI	GCTCTTC	2 cut(s)	693, 1479
BspTNI	GGTCTC	1 cut(s)	294
BsrDI	GCAATG	1 cut(s)	1160
BsrFI	RCCGGY	1 cut(s)	29
BsrI	ACTGG	2 cut(s)	861, 1638
BssAI	RCCGGY	1 cut(s)	29
BssECI	CCNNGG	6 cut(s)	146, 282, 576, 1566, 1575, 1617
BssMI	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
BssT1I	CCWWGG	2 cut(s)	1566, 1617
Bst2UI	CCWGG	6 cut(s)	58, 70, 855, 927, 960, 1093
Bst4CI	ACNGT	5 cut(s)	305, 482, 783, 1034, 1206
Bst6I	CTCTTC	6 cut(s)	116, 693, 966, 1010, 1479, 1730
BstBAI	YACGTR	1 cut(s)	186
BstC8I	GCNNGC	3 cut(s)	27, 31, 507
BstDEI	CTNAG	3 cut(s)	317, 837, 1410
BstF5I	GGATG	8 cut(s)	208, 406, 471, 495, 973, 1365, 1529, 1774
BstFNI	CGCG	1 cut(s)	53
BstHHI	GCGC	1 cut(s)	537
BstKTI	GATC	6 cut(s)	597, 754, 835, 860, 1408, 1597
BstMAI	GTCTC	3 cut(s)	294, 413, 1758
BstMBI	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
BstMCI	CGRYCG	1 cut(s)	1575
BstMWI	GCNNNNNNNGC	7 cut(s)	22, 440, 692, 773, 1165, 1171, 1442
BstNI	CCWGG	6 cut(s)	58, 70, 855, 927, 960, 1093
BstSCI	CCNGG	6 cut(s)	56, 68, 853, 925, 958, 1091
BstSFI	CTRYAG	1 cut(s)	444
BstSNI	TACGTA	1 cut(s)	186
BstUI	CGCG	1 cut(s)	53
BstV1I	GCAGC	5 cut(s)	216, 634, 785, 1177, 1432
BstV2I	GAAGAC	1 cut(s)	334
BstX2I	RGATCY	3 cut(s)	832, 857, 1405
BstYI	RGATCY	3 cut(s)	832, 857, 1405
Bsu36I	CCTNAGG	1 cut(s)	837
BsuI	GTATCC	2 cut(s)	378, 747
BsuRI	GGCC	6 cut(s)	25, 56, 434, 575, 942, 1159
BtrI	CACGTC	1 cut(s)	463
BtsCI	GGATG	8 cut(s)	208, 406, 471, 495, 973, 1365, 1529, 1774
BtsIMutI	CAGTG	1 cut(s)	1211
BveI	ACCTGC	1 cut(s)	448
Cac8I	GCNNGC	3 cut(s)	27, 31, 507
CfoI	GCGC	1 cut(s)	537
Cfr10I	RCCGGY	1 cut(s)	29
Cfr13I	GGNCC	3 cut(s)	72, 819, 940
CsiI	ACCWGGT	2 cut(s)	68, 925
Csp6I	GTAC	1 cut(s)	1520
CspCI	CAANNNNNGTGG	2 cut(s)	1187, 1222
CviAII	CATG	5 cut(s)	497, 600, 658, 1169, 1681
CviQI	GTAC	1 cut(s)	1520
DdeI	CTNAG	3 cut(s)	317, 837, 1410
DpnI	GATC	6 cut(s)	596, 753, 834, 859, 1407, 1596
DpnII	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
EaeI	YGGCCR	1 cut(s)	54
Eam1104I	CTCTTC	6 cut(s)	116, 693, 966, 1010, 1479, 1730
EarI	CTCTTC	6 cut(s)	116, 693, 966, 1010, 1479, 1730
Ecl136II	GAGCTC	2 cut(s)	1109, 1174
Eco105I	TACGTA	1 cut(s)	186
Eco130I	CCWWGG	2 cut(s)	1566, 1617
Eco147I	AGGCCT	1 cut(s)	25
Eco24I	GRGCYC	2 cut(s)	1111, 1176
Eco31I	GGTCTC	1 cut(s)	294
Eco47I	GGWCC	2 cut(s)	72, 819
Eco53kI	GAGCTC	2 cut(s)	1109, 1174
Eco57I	CTGAAG	5 cut(s)	97, 152, 884, 1460, 1487
Eco81I	CCTNAGG	1 cut(s)	837
Eco88I	CYCGRG	2 cut(s)	147, 1248
EcoICRI	GAGCTC	2 cut(s)	1109, 1174
EcoO109I	RGGNCCY	1 cut(s)	72
EcoRII	CCWGG	6 cut(s)	56, 68, 853, 925, 958, 1091
EcoT14I	CCWWGG	2 cut(s)	1566, 1617
EcoT22I	ATGCAT	2 cut(s)	128, 388
EcoT38I	GRGCYC	2 cut(s)	1111, 1176
ErhI	CCWWGG	2 cut(s)	1566, 1617
FaeI	CATG	5 cut(s)	500, 603, 661, 1172, 1684
FalI	AAGNNNNNCTT	8 cut(s)	87, 119, 319, 351, 989, 1021, 1494, 1526
FaqI	GGGAC	2 cut(s)	58, 1278
FatI	CATG	5 cut(s)	496, 599, 657, 1168, 1680
FauI	CCCGC	1 cut(s)	1255
FauNDI	CATATG	1 cut(s)	259
FbaI	TGATCA	1 cut(s)	594
Fnu4HI	GCNGC	7 cut(s)	54, 230, 432, 623, 774, 1166, 1446
FokI	GGATG	7 cut(s)	215, 413, 458, 502, 980, 1352, 1516
FriOI	GRGCYC	2 cut(s)	1111, 1176
Fsp4HI	GCNGC	7 cut(s)	54, 230, 432, 623, 774, 1166, 1446
FspBI	CTAG	1 cut(s)	1427
FspI	TGCGCA	1 cut(s)	536
GlaI	GCGC	1 cut(s)	536
GluI	GCNGC	7 cut(s)	54, 230, 432, 623, 774, 1166, 1446
HaeIII	GGCC	6 cut(s)	25, 56, 434, 575, 942, 1159
HapII	CCGG	2 cut(s)	30, 1325
HhaI	GCGC	1 cut(s)	537
Hin1II	CATG	5 cut(s)	500, 603, 661, 1172, 1684
Hin6I	GCGC	1 cut(s)	535
HinP1I	GCGC	1 cut(s)	535
HincII	GTYRAC	5 cut(s)	606, 646, 1042, 1153, 1300
HindII	GTYRAC	5 cut(s)	606, 646, 1042, 1153, 1300
HindIII	AAGCTT	2 cut(s)	507, 765
HinfI	GANTC	8 cut(s)	175, 523, 607, 875, 1049, 1066, 1589, 1751
HpaI	GTTAAC	1 cut(s)	1042
HpaII	CCGG	2 cut(s)	30, 1325
HphI	GGTGA	9 cut(s)	16, 58, 170, 178, 413, 605, 974, 1129, 1281
Hpy166II	GTNNAC	7 cut(s)	421, 606, 646, 1042, 1153, 1300, 1520
Hpy188III	TCNNGA	9 cut(s)	115, 149, 749, 795, 1027, 1250, 1325, 1379, 1598
Hpy8I	GTNNAC	7 cut(s)	421, 606, 646, 1042, 1153, 1300, 1520
HpyCH4III	ACNGT	5 cut(s)	305, 482, 783, 1034, 1206
HpyCH4IV	ACGT	3 cut(s)	185, 351, 462
HpyF10VI	GCNNNNNNNGC	7 cut(s)	22, 440, 692, 773, 1165, 1171, 1442
HpyF3I	CTNAG	3 cut(s)	317, 837, 1410
HpySE526I	ACGT	3 cut(s)	185, 351, 462
Hsp92II	CATG	5 cut(s)	500, 603, 661, 1172, 1684
HspAI	GCGC	1 cut(s)	535
Kpn2I	TCCGGA	1 cut(s)	1324
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
Ksp22I	TGATCA	1 cut(s)	594
KspAI	GTTAAC	1 cut(s)	1042
Kzo9I	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
LguI	GCTCTTC	2 cut(s)	693, 1479
LmnI	GCTCC	3 cut(s)	151, 1106, 1114
Lsp1109I	GCAGC	5 cut(s)	216, 634, 785, 1177, 1432
LweI	GCATC	5 cut(s)	373, 480, 796, 913, 1143
MabI	ACCWGGT	2 cut(s)	68, 925
MaeI	CTAG	1 cut(s)	1427
MaeII	ACGT	3 cut(s)	185, 351, 462
MaeIII	GTNAC	2 cut(s)	64, 1287
MalI	GATC	6 cut(s)	596, 753, 834, 859, 1407, 1596
MboI	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
MfeI	CAATTG	1 cut(s)	590
MflI	RGATCY	3 cut(s)	832, 857, 1405
MhlI	GDGCHC	2 cut(s)	1111, 1176
MlyI	GAGTC	4 cut(s)	517, 601, 884, 1760
MmeI	TCCRAC	3 cut(s)	464, 810, 1366
Mph1103I	ATGCAT	2 cut(s)	128, 388
MroI	TCCGGA	1 cut(s)	1324
MroNI	GCCGGC	1 cut(s)	29
MroXI	GAANNNNTTC	2 cut(s)	954, 1022
MseI	TTAA	4 cut(s)	555, 884, 1041, 1512
MslI	CAYNNNNRTG	2 cut(s)	728, 1710
MspA1I	CMGCKG	1 cut(s)	229
MspI	CCGG	2 cut(s)	30, 1325
MspR9I	CCNGG	6 cut(s)	58, 70, 855, 927, 960, 1093
MunI	CAATTG	1 cut(s)	590
Mva1269I	GAATGC	1 cut(s)	126
MvaI	CCWGG	6 cut(s)	58, 70, 855, 927, 960, 1093
MvnI	CGCG	1 cut(s)	53
MwoI	GCNNNNNNNGC	7 cut(s)	22, 440, 692, 773, 1165, 1171, 1442
NaeI	GCCGGC	1 cut(s)	31
NdeI	CATATG	1 cut(s)	259
NdeII	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	5 cut(s)	500, 603, 661, 1172, 1684
NlaIV	GGNNCC	4 cut(s)	74, 153, 834, 859
NmeAIII	GCCGAG	2 cut(s)	307, 601
NmuCI	GTSAC	2 cut(s)	64, 1287
NsbI	TGCGCA	1 cut(s)	536
NsiI	ATGCAT	2 cut(s)	128, 388
PceI	AGGCCT	1 cut(s)	25
PciSI	GCTCTTC	2 cut(s)	693, 1479
PctI	GAATGC	1 cut(s)	126
PdiI	GCCGGC	1 cut(s)	31
PdmI	GAANNNNTTC	2 cut(s)	954, 1022
PfeI	GAWTC	4 cut(s)	175, 1049, 1066, 1589
PflMI	CCANNNNNTGG	1 cut(s)	1385
PfoI	TCCNGGA	1 cut(s)	1091
PkrI	GCNGC	7 cut(s)	55, 231, 433, 624, 775, 1167, 1447
PleI	GAGTC	4 cut(s)	517, 601, 883, 1759
PpsI	GAGTC	4 cut(s)	517, 601, 883, 1759
Ppu21I	YACGTR	1 cut(s)	186
PpuMI	RGGWCCY	1 cut(s)	72
Psp124BI	GAGCTC	2 cut(s)	1111, 1176
Psp1406I	AACGTT	1 cut(s)	351
Psp5II	RGGWCCY	1 cut(s)	72
Psp6I	CCWGG	6 cut(s)	56, 68, 853, 925, 958, 1091
PspGI	CCWGG	6 cut(s)	56, 68, 853, 925, 958, 1091
PspN4I	GGNNCC	4 cut(s)	74, 153, 834, 859
PspPI	GGNCC	3 cut(s)	72, 819, 940
PspPPI	RGGWCCY	1 cut(s)	72
PsrI	GAACNNNNNNTAC	4 cut(s)	359, 391, 1623, 1655
PsuI	RGATCY	3 cut(s)	832, 857, 1405
RsaI	GTAC	1 cut(s)	1521
RsaNI	GTAC	1 cut(s)	1520
RseI	CAYNNNNRTG	2 cut(s)	728, 1710
SacI	GAGCTC	2 cut(s)	1111, 1176
SapI	GCTCTTC	2 cut(s)	693, 1479
SaqAI	TTAA	4 cut(s)	555, 884, 1041, 1512
SatI	GCNGC	7 cut(s)	54, 230, 432, 623, 774, 1166, 1446
Sau3AI	GATC	6 cut(s)	594, 751, 832, 857, 1405, 1594
Sau96I	GGNCC	3 cut(s)	72, 819, 940
SchI	GAGTC	4 cut(s)	517, 601, 884, 1760
ScrFI	CCNGG	6 cut(s)	58, 70, 855, 927, 960, 1093
SduI	GDGCHC	2 cut(s)	1111, 1176
SexAI	ACCWGGT	2 cut(s)	68, 925
SfaNI	GCATC	5 cut(s)	373, 480, 796, 913, 1143
SfcI	CTRYAG	1 cut(s)	444
SinI	GGWCC	2 cut(s)	72, 819
SmiMI	CAYNNNNRTG	2 cut(s)	728, 1710
SnaBI	TACGTA	1 cut(s)	186
SseBI	AGGCCT	1 cut(s)	25
SsiI	CCGC	5 cut(s)	53, 227, 431, 1262, 1523
SspI	AATATT	1 cut(s)	313
SspMI	CTAG	1 cut(s)	1427
SstI	GAGCTC	2 cut(s)	1111, 1176
StuI	AGGCCT	1 cut(s)	25
StyD4I	CCNGG	6 cut(s)	56, 68, 853, 925, 958, 1091
StyI	CCWWGG	2 cut(s)	1566, 1617
TaaI	ACNGT	5 cut(s)	305, 482, 783, 1034, 1206
TaiI	ACGT	3 cut(s)	188, 354, 465
TaqI	TCGA	3 cut(s)	234, 757, 804
TaqII	GACCGA	2 cut(s)	807, 1589
TauI	GCSGC	2 cut(s)	56, 434
TfiI	GAWTC	4 cut(s)	175, 1049, 1066, 1589
Tru1I	TTAA	4 cut(s)	555, 884, 1041, 1512
Tru9I	TTAA	4 cut(s)	555, 884, 1041, 1512
TscAI	CASTG	1 cut(s)	1211
TseFI	GTSAC	2 cut(s)	64, 1287
TseI	GCWGC	5 cut(s)	229, 622, 773, 1165, 1445
Tsp45I	GTSAC	2 cut(s)	64, 1287
TspGWI	ACGGA	1 cut(s)	1747
TspRI	CASTG	1 cut(s)	1211
Van91I	CCANNNNNTGG	1 cut(s)	1385
VpaK11BI	GGWCC	2 cut(s)	72, 819
XapI	RAATTY	3 cut(s)	1019, 1236, 1414
XmnI	GAANNNNTTC	2 cut(s)	954, 1022
XspI	CTAG	1 cut(s)	1427
Zsp2I	ATGCAT	2 cut(s)	128, 388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.