No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g28341 |
| malus_domestica | MD03G1170500.v1.1 |
| prunus_persica | Prupe.4G256400_v2.0.a1 |
| rosa_samantha | Rh5AG339400 Rh5BG349300 Rh5CG376200 Rh5DG362200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 196 |
| AfaI | GTAC | 1 cut(s) | 53 |
| AgsI | TTSAA | 1 cut(s) | 38 |
| AleI | CACNNNNGTG | 1 cut(s) | 267 |
| AluBI | AGCT | 2 cut(s) | 120, 152 |
| AluI | AGCT | 2 cut(s) | 120, 152 |
| Alw26I | GTCTC | 1 cut(s) | 223 |
| ApeKI | GCWGC | 3 cut(s) | 213, 216, 219 |
| ApoI | RAATTY | 1 cut(s) | 196 |
| BbvI | GCAGC | 3 cut(s) | 225, 228, 231 |
| BccI | CCATC | 1 cut(s) | 22 |
| BclI | TGATCA | 2 cut(s) | 157, 163 |
| BcoDI | GTCTC | 1 cut(s) | 223 |
| BfaI | CTAG | 1 cut(s) | 375 |
| BisI | GCNGC | 3 cut(s) | 214, 217, 220 |
| BlsI | GCNGC | 3 cut(s) | 215, 218, 221 |
| BmrI | ACTGGG | 2 cut(s) | 142, 274 |
| BmuI | ACTGGG | 2 cut(s) | 142, 274 |
| BsaBI | GATNNNNATC | 1 cut(s) | 162 |
| BsaI | GGTCTC | 1 cut(s) | 223 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 264, 294 |
| Bse1I | ACTGG | 2 cut(s) | 137, 269 |
| Bse8I | GATNNNNATC | 1 cut(s) | 162 |
| BseGI | GGATG | 1 cut(s) | 37 |
| BseJI | GATNNNNATC | 1 cut(s) | 162 |
| BseMII | CTCAG | 1 cut(s) | 104 |
| BseNI | ACTGG | 2 cut(s) | 137, 269 |
| BseRI | GAGGAG | 1 cut(s) | 307 |
| BseXI | GCAGC | 3 cut(s) | 225, 228, 231 |
| BsmAI | GTCTC | 1 cut(s) | 223 |
| BsmI | GAATGC | 1 cut(s) | 215 |
| Bso31I | GGTCTC | 1 cut(s) | 223 |
| Bsp143I | GATC | 2 cut(s) | 157, 163 |
| BspCNI | CTCAG | 1 cut(s) | 105 |
| BspHI | TCATGA | 2 cut(s) | 160, 169 |
| BspTNI | GGTCTC | 1 cut(s) | 223 |
| BsrI | ACTGG | 2 cut(s) | 137, 269 |
| BssMI | GATC | 2 cut(s) | 157, 163 |
| Bst4CI | ACNGT | 1 cut(s) | 56 |
| Bst6I | CTCTTC | 2 cut(s) | 18, 97 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 210 |
| BstDEI | CTNAG | 2 cut(s) | 62, 113 |
| BstF5I | GGATG | 1 cut(s) | 37 |
| BstKTI | GATC | 2 cut(s) | 160, 166 |
| BstMAI | GTCTC | 1 cut(s) | 223 |
| BstMBI | GATC | 2 cut(s) | 157, 163 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 210, 219 |
| BstV1I | GCAGC | 3 cut(s) | 225, 228, 231 |
| BtsCI | GGATG | 1 cut(s) | 37 |
| BtsI | GCAGTG | 1 cut(s) | 357 |
| BtsIMutI | CAGTG | 3 cut(s) | 61, 262, 357 |
| CciI | TCATGA | 2 cut(s) | 160, 169 |
| Csp6I | GTAC | 1 cut(s) | 52 |
| CviAII | CATG | 2 cut(s) | 161, 170 |
| CviJI | RGCY | 6 cut(s) | 120, 152, 180, 193, 311, 352 |
| CviKI_1 | RGCY | 6 cut(s) | 120, 152, 180, 193, 311, 352 |
| CviQI | GTAC | 1 cut(s) | 52 |
| DdeI | CTNAG | 2 cut(s) | 62, 113 |
| DpnI | GATC | 2 cut(s) | 159, 165 |
| DpnII | GATC | 2 cut(s) | 157, 163 |
| DraI | TTTAAA | 1 cut(s) | 301 |
| Eam1104I | CTCTTC | 2 cut(s) | 18, 97 |
| EarI | CTCTTC | 2 cut(s) | 18, 97 |
| Eco31I | GGTCTC | 1 cut(s) | 223 |
| FaeI | CATG | 2 cut(s) | 164, 173 |
| FaiI | YATR | 7 cut(s) | 20, 162, 171, 236, 306, 319, 321 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 233, 265 |
| FatI | CATG | 2 cut(s) | 160, 169 |
| FbaI | TGATCA | 2 cut(s) | 157, 163 |
| Fnu4HI | GCNGC | 3 cut(s) | 214, 217, 220 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 3 cut(s) | 214, 217, 220 |
| FspBI | CTAG | 1 cut(s) | 375 |
| GluI | GCNGC | 3 cut(s) | 214, 217, 220 |
| Hin1II | CATG | 2 cut(s) | 164, 173 |
| Hpy166II | GTNNAC | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 1 cut(s) | 157 |
| Hpy188III | TCNNGA | 5 cut(s) | 80, 112, 128, 161, 170 |
| Hpy8I | GTNNAC | 1 cut(s) | 59 |
| HpyAV | CCTTC | 2 cut(s) | 170, 271 |
| HpyCH4III | ACNGT | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 1 cut(s) | 213 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 210, 219 |
| HpyF3I | CTNAG | 2 cut(s) | 62, 113 |
| Hsp92II | CATG | 2 cut(s) | 164, 173 |
| Ksp22I | TGATCA | 2 cut(s) | 157, 163 |
| Kzo9I | GATC | 2 cut(s) | 157, 163 |
| LmnI | GCTCC | 1 cut(s) | 149 |
| LpnPI | CCDG | 5 cut(s) | 27, 118, 125, 214, 250 |
| Lsp1109I | GCAGC | 3 cut(s) | 225, 228, 231 |
| MaeI | CTAG | 1 cut(s) | 375 |
| MalI | GATC | 2 cut(s) | 159, 165 |
| MboI | GATC | 2 cut(s) | 157, 163 |
| MboII | GAAGA | 4 cut(s) | 35, 98, 114, 253 |
| MluCI | AATT | 1 cut(s) | 196 |
| MnlI | CCTC | 7 cut(s) | 135, 139, 166, 266, 285, 288, 348 |
| MseI | TTAA | 4 cut(s) | 182, 300, 348, 379 |
| MslI | CAYNNNNRTG | 1 cut(s) | 267 |
| MssI | GTTTAAAC | 1 cut(s) | 301 |
| Mva1269I | GAATGC | 1 cut(s) | 215 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 210, 219 |
| NdeII | GATC | 2 cut(s) | 157, 163 |
| NlaIII | CATG | 2 cut(s) | 164, 173 |
| OliI | CACNNNNGTG | 1 cut(s) | 267 |
| PagI | TCATGA | 2 cut(s) | 160, 169 |
| PctI | GAATGC | 1 cut(s) | 215 |
| PkrI | GCNGC | 3 cut(s) | 215, 218, 221 |
| PmeI | GTTTAAAC | 1 cut(s) | 301 |
| RsaI | GTAC | 1 cut(s) | 53 |
| RsaNI | GTAC | 1 cut(s) | 52 |
| RseI | CAYNNNNRTG | 1 cut(s) | 267 |
| SaqAI | TTAA | 4 cut(s) | 182, 300, 348, 379 |
| SatI | GCNGC | 3 cut(s) | 214, 217, 220 |
| Sau3AI | GATC | 2 cut(s) | 157, 163 |
| SetI | ASST | 4 cut(s) | 122, 154, 282, 299 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 267 |
| Sse9I | AATT | 1 cut(s) | 196 |
| SspMI | CTAG | 1 cut(s) | 375 |
| TaaI | ACNGT | 1 cut(s) | 56 |
| TaqI | TCGA | 1 cut(s) | 79 |
| TasI | AATT | 1 cut(s) | 196 |
| TatI | WGTACW | 1 cut(s) | 51 |
| Tru1I | TTAA | 4 cut(s) | 182, 300, 348, 379 |
| Tru9I | TTAA | 4 cut(s) | 182, 300, 348, 379 |
| TscAI | CASTG | 3 cut(s) | 61, 269, 364 |
| TseI | GCWGC | 3 cut(s) | 213, 216, 219 |
| TspDTI | ATGAA | 2 cut(s) | 17, 99 |
| TspRI | CASTG | 3 cut(s) | 61, 269, 364 |
| XapI | RAATTY | 1 cut(s) | 196 |
| XspI | CTAG | 1 cut(s) | 375 |