FvH4_3g40270

15-cis-phytoene desaturase, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0015456
Physical Location & Seq
Reverse (-)
34020012 .. 34021957
1946 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g40270.t1

Sequence Viewer

Length: 1518 bp
ATGAGGAACAAGATTGCCTATGTCCCACATCCTACAGATGAAATTTTCCGATCAACCAAACAAGCCCTCGATCTCATCCTTCTTTTCGAAATGAAACTCCTCACTCTACCTGTCCCTCATCCCTGTTCTCCAAACCCTACCCTCCTCCGCTTCAAATTCAAACCCCAATCATCTCTACAGTACCCAAATCTCACTCCCCCTAAACCTCAATCCCAACCAACACAAAAACCACGTGTCGTCGTCATCGGCGCCGGCCTCGCCGGCCTAGCCGCAGCCACCCACCTCAACTCCCAAAACATCCCCTTCCTTCTTCTCGAAGCTTCTGATGACGTCGGCGGCCGTGTCCGAACCGACCTTGTCGACGACTTTCTTCTCGACCGCGGTTTCCAAATCTTCATTACAGCTTACCCCGAAGCTCGGAAGCTTCTCGATTACCAAGCCCTCGATCTTCAAACATTCTACTCGGGAGCTAGAATATACTACAATGGCCAGTTCCACACCGTAGCCGATCCTCTGCGCAATTTTTGGGATTCCATCAAGTCCTTAGCTAATCCAATCGGATCAGTTTCTGATAAACTGCTTATCGGATTGACGAGACTCCGGGTTTTGATCAAATCCGATGAAGAAATATTTGCTTCAAGTGAAGTCTCCACGATGGAGCTGCTGAGGAAAACCGGGTTTTCGGATTCGATCATAGGCCGATTCTTTCAACCCTTTTTCGGCGGAGTTTTCTTCGACAAGAAGCTCGAGACTACTTCCAGATTGTTCGATTTCATCTTCAAGTGTCTTGCTCTTGGAGACAACACTCTTCCTTCCAAAGGCATTGGCGCCATTCCAAAACAATTGGCGGCAAAGTTGCCAGCTGATTCGATTCTCTTCAACTCGAAGGTCCTTTCGATTGATCTCGATGGCGAGGCGCCGCTTGTGAGGTTGGAGAATGGAGAAGAGTTGAGTAGCGAGCTAGGTGTGATAGTGGCAGTTGAGCAACCAGAAGCGGATAAGCTTTTGGCGGGAAAGGCGTATGAACCGGTCCAAAGGAAACCGGCTCGGAGTACTGTTTGTTTGTATTTCTCAACAGACCGGGACAATATTCCGGTCCAAGATCCCGTTTTGTTTCTTAACGGTTCAGGTAAAGGCATTGTGAATAACATGTTCTTTGCAACAAATGTAGCTCCGTCTTATGGACCATCTGAAAAGGCATTGGTTTCGATATCCTTGGTCGGAGACTTTGAGAATGTGAAAGATGAGGATTTGACGGTTCAAGTTGTTCGTGAGCTCTCTGACTGGTTCGGGGGATCCATGGTAGGATCTTGGAGGCATCTAAGAACGTATCGGATCAAATTCGCACAACCTAATCAATCTCCGCCGGTTCATTCAACAAGAGATTCTCGAGTCAAGTCGGGTGTTTACGTATGCGGTGATCATGTCACAACTGCCACATTTGATGGTGCTTTGGTTTCGGGAAGAAGAGCAGTAGAAGCTTTGCTCAGAGACAATGCCTTGAATCGAGTAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase

Protein Analysis

506

Amino Acids

55.87

Weight (kDa)

7.65

Isoelectric Point (pI)

36.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 81 - 145 1.6e-14 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 86 - 496 1.2e-56 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015456)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09580
fragaria_vesca FvH4_3g40270
malus_domestica MD03G1054600.v1.1
prunus_persica Prupe.6G043200_v2.0.a1
pyrus_communis pycom03g04330
rosa_chinensis RchiOBHm_Chr5g0072531
rosa_laevigata RLG00000036310
rosa_multiflora Rmu_sc0002088.1_g000015 Rmu_sc0007873.1_g000006
rosa_roxburghii Rroxscaffold_1G00008610
rosa_rugosa Rorug05G0418900
rosa_samantha Rh5AG475400 Rh5BG495600 Rh5CG519400 Rh5DG507800
rosa_wichuraiana Rw5G044160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 333
Acc16I TGCGCA 1 cut(s) 518
AccB1I GGYRCC 3 cut(s) 248, 827, 916
AccI GTMKAC 1 cut(s) 360
AccII CGCG 1 cut(s) 381
AclWI GGATC 7 cut(s) 503, 568, 1097, 1290, 1303, 1315, 1343
AcoI YGGCCR 2 cut(s) 337, 487
AcsI RAATTY 3 cut(s) 42, 155, 1340
AcvI CACGTG 1 cut(s) 233
AcyI GRCGYC 4 cut(s) 249, 330, 828, 917
AfaI GTAC 2 cut(s) 182, 1054
AfiI CCNNNNNNNGG 4 cut(s) 417, 719, 818, 1181
AflIII ACRYGT 2 cut(s) 232, 1149
AgeI ACCGGT 1 cut(s) 1027
Alw21I GWGCWC 1 cut(s) 1278
Alw26I GTCTC 6 cut(s) 589, 652, 743, 792, 1218, 1485
AlwI GGATC 7 cut(s) 503, 568, 1097, 1290, 1303, 1315, 1343
AlwNI CAGNNNCTG 1 cut(s) 569
Ama87I CYCGRG 3 cut(s) 463, 746, 1389
AoxI GGCC 5 cut(s) 253, 262, 337, 487, 697
ApeKI GCWGC 2 cut(s) 272, 661
ApoI RAATTY 3 cut(s) 42, 155, 1340
AsiGI ACCGGT 1 cut(s) 1027
AspLEI GCGC 4 cut(s) 251, 519, 830, 919
AspS9I GGNCC 4 cut(s) 889, 1030, 1096, 1184
AsuC2I CCSGG 3 cut(s) 602, 676, 1082
AsuHPI GGTGA 1 cut(s) 1430
AsuII TTCGAA 1 cut(s) 87
AvaI CYCGRG 3 cut(s) 463, 746, 1389
AvaII GGWCC 4 cut(s) 889, 1030, 1096, 1184
BalI TGGCCA 1 cut(s) 489
BamHI GGATCC 1 cut(s) 1295
BanI GGYRCC 3 cut(s) 248, 827, 916
BanII GRGCYC 1 cut(s) 1278
BbrPI CACGTG 1 cut(s) 233
Bbv12I GWGCWC 1 cut(s) 1278
BbvCI CCTCAGC 1 cut(s) 665
BbvI GCAGC 2 cut(s) 284, 648
BccI CCATC 5 cut(s) 542, 649, 902, 1195, 1439
BceAI ACGGC 1 cut(s) 324
BcgI CGANNNNNNTGC 4 cut(s) 643, 677, 1188, 1222
BclI TGATCA 2 cut(s) 609, 1420
BcnI CCSGG 3 cut(s) 602, 676, 1082
BcoDI GTCTC 6 cut(s) 589, 652, 743, 792, 1218, 1485
BfaI CTAG 3 cut(s) 266, 471, 962
BfmI CTRYAG 2 cut(s) 33, 176
BfoI RGCGCY 3 cut(s) 252, 831, 920
BglI GCCNNNNNGGC 1 cut(s) 261
BisI GCNGC 6 cut(s) 270, 273, 337, 662, 849, 920
BlsI GCNGC 6 cut(s) 271, 274, 338, 663, 850, 921
BmcAI AGTACT 1 cut(s) 1054
Bme1390I CCNGG 3 cut(s) 602, 676, 1082
Bme18I GGWCC 4 cut(s) 889, 1030, 1096, 1184
BmeT110I CYCGRG 3 cut(s) 463, 746, 1389
BmgT120I GGNCC 4 cut(s) 889, 1030, 1096, 1184
BmiI GGNNCC 4 cut(s) 250, 829, 918, 1297
BmrFI CCNGG 3 cut(s) 602, 676, 1082
BmsI GCATC 1 cut(s) 1327
Bpu10I CCTNAGC 2 cut(s) 544, 665
Bpu14I TTCGAA 1 cut(s) 87
BpuMI CCSGG 3 cut(s) 602, 676, 1082
BsaAI YACGTR 2 cut(s) 233, 1411
BsaHI GRCGYC 4 cut(s) 249, 330, 828, 917
BsaJI CCNNGG 3 cut(s) 379, 1215, 1299
BsaWI WCCGGW 2 cut(s) 1027, 1093
BsaXI ACNNNNNCTCC 2 cut(s) 272, 302
Bsc4I CCNNNNNNNGG 4 cut(s) 417, 719, 818, 1181
Bse118I RCCGGY 5 cut(s) 251, 260, 1027, 1042, 1366
Bse1I ACTGG 2 cut(s) 490, 1289
BseDI CCNNGG 3 cut(s) 379, 1215, 1299
BseGI GGATG 4 cut(s) 28, 75, 118, 297
BseLI CCNNNNNNNGG 4 cut(s) 417, 719, 818, 1181
BseMII CTCAG 2 cut(s) 656, 1501
BseNI ACTGG 2 cut(s) 490, 1289
BseRI GAGGAG 2 cut(s) 89, 134
BseX3I CGGCCG 1 cut(s) 337
BseXI GCAGC 2 cut(s) 284, 648
Bsh1236I CGCG 1 cut(s) 381
Bsh1285I CGRYCG 2 cut(s) 340, 379
BshFI GGCC 5 cut(s) 255, 264, 339, 489, 699
BshNI GGYRCC 3 cut(s) 248, 827, 916
BshTI ACCGGT 1 cut(s) 1027
BsiEI CGRYCG 2 cut(s) 340, 379
BsiHKAI GWGCWC 1 cut(s) 1278
BsiHKCI CYCGRG 3 cut(s) 463, 746, 1389
BsiSI CCGG 9 cut(s) 252, 261, 601, 675, 1028, 1043, 1081, 1094, 1367
BslFI GGGAC 3 cut(s) 8, 98, 1097
BslI CCNNNNNNNGG 4 cut(s) 417, 719, 818, 1181
BsmAI GTCTC 6 cut(s) 589, 652, 743, 792, 1218, 1485
BsmFI GGGAC 3 cut(s) 8, 98, 1097
BsnI GGCC 5 cut(s) 255, 264, 339, 489, 699
BsoBI CYCGRG 3 cut(s) 463, 746, 1389
Bsp119I TTCGAA 1 cut(s) 87
Bsp1286I GDGCHC 1 cut(s) 1278
Bsp19I CCATGG 1 cut(s) 1299
BspANI GGCC 5 cut(s) 255, 264, 339, 489, 699
BspCNI CTCAG 2 cut(s) 657, 1500
BspFNI CGCG 1 cut(s) 381
BspLI GGNNCC 4 cut(s) 250, 829, 918, 1297
BspPI GGATC 7 cut(s) 503, 568, 1097, 1290, 1303, 1315, 1343
BspQI GCTCTTC 1 cut(s) 1462
BspT104I TTCGAA 1 cut(s) 87
BspT107I GGYRCC 3 cut(s) 248, 827, 916
BsrFI RCCGGY 5 cut(s) 251, 260, 1027, 1042, 1366
BsrI ACTGG 2 cut(s) 490, 1289
BssAI RCCGGY 5 cut(s) 251, 260, 1027, 1042, 1366
BssECI CCNNGG 3 cut(s) 379, 1215, 1299
BssNI GRCGYC 4 cut(s) 249, 330, 828, 917
BssT1I CCWWGG 2 cut(s) 1215, 1299
Bst4CI ACNGT 5 cut(s) 180, 502, 1057, 1124, 1258
Bst6I CTCTTC 4 cut(s) 813, 881, 939, 1462
BstACI GRCGYC 4 cut(s) 249, 330, 828, 917
BstBAI YACGTR 2 cut(s) 233, 1411
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 4 cut(s) 253, 262, 861, 959
BstDEI CTNAG 4 cut(s) 544, 665, 1322, 1487
BstDSI CCRYGG 2 cut(s) 379, 1299
BstENI CCTNNNNNAGG 1 cut(s) 816
BstF5I GGATG 4 cut(s) 28, 75, 118, 297
BstFNI CGCG 1 cut(s) 381
BstH2I RGCGCY 3 cut(s) 252, 831, 920
BstHHI GCGC 4 cut(s) 251, 519, 830, 919
BstMAI GTCTC 6 cut(s) 589, 652, 743, 792, 1218, 1485
BstMCI CGRYCG 2 cut(s) 340, 379
BstMWI GCNNNNNNNGC 5 cut(s) 257, 261, 266, 1016, 1478
BstNSI RCATGY 1 cut(s) 1153
BstSCI CCNGG 3 cut(s) 600, 674, 1080
BstSFI CTRYAG 2 cut(s) 33, 176
BstSNI TACGTA 1 cut(s) 1411
BstUI CGCG 1 cut(s) 381
BstV1I GCAGC 2 cut(s) 284, 648
BstX2I RGATCY 3 cut(s) 1102, 1295, 1307
BstYI RGATCY 3 cut(s) 1102, 1295, 1307
BstZI CGGCCG 1 cut(s) 337
BsuRI GGCC 5 cut(s) 255, 264, 339, 489, 699
BtgI CCRYGG 2 cut(s) 379, 1299
BtsCI GGATG 4 cut(s) 28, 75, 118, 297
Cac8I GCNNGC 4 cut(s) 253, 262, 861, 959
CaiI CAGNNNCTG 1 cut(s) 569
CfoI GCGC 4 cut(s) 251, 519, 830, 919
Cfr10I RCCGGY 5 cut(s) 251, 260, 1027, 1042, 1366
Cfr13I GGNCC 4 cut(s) 889, 1030, 1096, 1184
Cfr42I CCGCGG 1 cut(s) 382
Csp6I GTAC 2 cut(s) 181, 1053
CspAI ACCGGT 1 cut(s) 1027
CviAII CATG 3 cut(s) 1150, 1300, 1424
CviQI GTAC 2 cut(s) 181, 1053
DdeI CTNAG 4 cut(s) 544, 665, 1322, 1487
DinI GGCGCC 3 cut(s) 250, 829, 918
EaeI YGGCCR 2 cut(s) 337, 487
EagI CGGCCG 1 cut(s) 337
Eam1104I CTCTTC 4 cut(s) 813, 881, 939, 1462
EarI CTCTTC 4 cut(s) 813, 881, 939, 1462
EciI GGCGGA 2 cut(s) 738, 1353
Ecl136II GAGCTC 1 cut(s) 1276
EclXI CGGCCG 1 cut(s) 337
Eco105I TACGTA 1 cut(s) 1411
Eco130I CCWWGG 2 cut(s) 1215, 1299
Eco24I GRGCYC 1 cut(s) 1278
Eco32I GATATC 1 cut(s) 1212
Eco47I GGWCC 4 cut(s) 889, 1030, 1096, 1184
Eco52I CGGCCG 1 cut(s) 337
Eco53kI GAGCTC 1 cut(s) 1276
Eco72I CACGTG 1 cut(s) 233
Eco88I CYCGRG 3 cut(s) 463, 746, 1389
EcoICRI GAGCTC 1 cut(s) 1276
EcoNI CCTNNNNNAGG 1 cut(s) 816
EcoO109I RGGNCCY 1 cut(s) 889
EcoRV GATATC 1 cut(s) 1212
EcoT14I CCWWGG 2 cut(s) 1215, 1299
EcoT38I GRGCYC 1 cut(s) 1278
EgeI GGCGCC 3 cut(s) 250, 829, 918
EheI GGCGCC 3 cut(s) 250, 829, 918
ErhI CCWWGG 2 cut(s) 1215, 1299
FaeI CATG 3 cut(s) 1153, 1303, 1427
FaiI YATR 9 cut(s) 21, 478, 695, 1023, 1151, 1182, 1301, 1414, 1425
FaqI GGGAC 3 cut(s) 8, 98, 1097
FatI CATG 3 cut(s) 1149, 1299, 1423
FauI CCCGC 1 cut(s) 1003
FbaI TGATCA 2 cut(s) 609, 1420
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 6 cut(s) 270, 273, 337, 662, 849, 920
FokI GGATG 4 cut(s) 15, 62, 105, 284
FriOI GRGCYC 1 cut(s) 1278
Fsp4HI GCNGC 6 cut(s) 270, 273, 337, 662, 849, 920
FspBI CTAG 3 cut(s) 266, 471, 962
FspI TGCGCA 1 cut(s) 518
GlaI GCGC 4 cut(s) 250, 518, 829, 918
GluI GCNGC 6 cut(s) 270, 273, 337, 662, 849, 920
HaeII RGCGCY 3 cut(s) 252, 831, 920
HaeIII GGCC 5 cut(s) 255, 264, 339, 489, 699
HapII CCGG 9 cut(s) 252, 261, 601, 675, 1028, 1043, 1081, 1094, 1367
HhaI GCGC 4 cut(s) 251, 519, 830, 919
Hin1I GRCGYC 4 cut(s) 249, 330, 828, 917
Hin1II CATG 3 cut(s) 1153, 1303, 1427
Hin6I GCGC 4 cut(s) 249, 517, 828, 917
HinP1I GCGC 4 cut(s) 249, 517, 828, 917
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HindIII AAGCTT 4 cut(s) 318, 422, 1001, 1479
HinfI GANTC 9 cut(s) 530, 597, 686, 702, 866, 871, 1385, 1392, 1504
HpaII CCGG 9 cut(s) 252, 261, 601, 675, 1028, 1043, 1081, 1094, 1367
HphI GGTGA 1 cut(s) 1430
Hpy166II GTNNAC 2 cut(s) 361, 1408
Hpy8I GTNNAC 2 cut(s) 361, 1408
Hpy99I CGWCG 3 cut(s) 242, 335, 365
HpyAV CCTTC 5 cut(s) 89, 313, 317, 822, 880
HpyCH4III ACNGT 5 cut(s) 180, 502, 1057, 1124, 1258
HpyCH4IV ACGT 4 cut(s) 232, 330, 1328, 1410
HpyCH4V TGCA 1 cut(s) 1160
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 261, 266, 1016, 1478
HpyF3I CTNAG 4 cut(s) 544, 665, 1322, 1487
HpySE526I ACGT 4 cut(s) 232, 330, 1328, 1410
Hsp92I GRCGYC 4 cut(s) 249, 330, 828, 917
Hsp92II CATG 3 cut(s) 1153, 1303, 1427
HspAI GCGC 4 cut(s) 249, 517, 828, 917
KasI GGCGCC 3 cut(s) 248, 827, 916
KroI GCCGGC 2 cut(s) 251, 260
KroNI GCCGGC 2 cut(s) 253, 262
Ksp22I TGATCA 2 cut(s) 609, 1420
KspI CCGCGG 1 cut(s) 382
LguI GCTCTTC 1 cut(s) 1462
LmnI GCTCC 3 cut(s) 467, 658, 1177
Lsp1109I GCAGC 2 cut(s) 284, 648
LweI GCATC 1 cut(s) 1327
MaeI CTAG 3 cut(s) 266, 471, 962
MaeII ACGT 4 cut(s) 232, 330, 1328, 1410
MaeIII GTNAC 1 cut(s) 1426
MfeI CAATTG 1 cut(s) 842
MflI RGATCY 3 cut(s) 1102, 1295, 1307
MhlI GDGCHC 1 cut(s) 1278
MlsI TGGCCA 1 cut(s) 489
MluCI AATT 6 cut(s) 42, 155, 520, 842, 1340, 1512
MluNI TGGCCA 1 cut(s) 489
Mly113I GGCGCC 3 cut(s) 249, 828, 917
MlyI GAGTC 2 cut(s) 591, 1401
MmeI TCCRAC 2 cut(s) 912, 1201
Mox20I TGGCCA 1 cut(s) 489
MroNI GCCGGC 2 cut(s) 251, 260
MscI TGGCCA 1 cut(s) 489
MseI TTAA 2 cut(s) 1119, 1516
Msp20I TGGCCA 1 cut(s) 489
MspA1I CMGCKG 2 cut(s) 381, 863
MspI CCGG 9 cut(s) 252, 261, 601, 675, 1028, 1043, 1081, 1094, 1367
MspR9I CCNGG 3 cut(s) 602, 676, 1082
MunI CAATTG 1 cut(s) 842
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 5 cut(s) 257, 261, 266, 1016, 1478
NaeI GCCGGC 2 cut(s) 253, 262
NarI GGCGCC 3 cut(s) 249, 828, 917
NciI CCSGG 3 cut(s) 602, 676, 1082
NcoI CCATGG 1 cut(s) 1299
NgoMIV GCCGGC 2 cut(s) 251, 260
NlaIII CATG 3 cut(s) 1153, 1303, 1427
NlaIV GGNNCC 4 cut(s) 250, 829, 918, 1297
NmuCI GTSAC 1 cut(s) 1426
NsbI TGCGCA 1 cut(s) 518
NspI RCATGY 1 cut(s) 1153
NspV TTCGAA 1 cut(s) 87
PaeR7I CTCGAG 2 cut(s) 746, 1389
PciI ACATGT 1 cut(s) 1149
PciSI GCTCTTC 1 cut(s) 1462
PdiI GCCGGC 2 cut(s) 253, 262
PfeI GAWTC 7 cut(s) 530, 686, 702, 866, 871, 1385, 1504
PflFI GACNNNGTC 1 cut(s) 356
PinAI ACCGGT 1 cut(s) 1027
PkrI GCNGC 6 cut(s) 271, 274, 338, 663, 850, 921
PleI GAGTC 2 cut(s) 591, 1400
PluTI GGCGCC 3 cut(s) 252, 831, 920
PmaCI CACGTG 1 cut(s) 233
PmlI CACGTG 1 cut(s) 233
PpsI GAGTC 2 cut(s) 591, 1400
Ppu21I YACGTR 2 cut(s) 233, 1411
PpuMI RGGWCCY 1 cut(s) 889
PscI ACATGT 1 cut(s) 1149
Psp124BI GAGCTC 1 cut(s) 1278
Psp5II RGGWCCY 1 cut(s) 889
PspCI CACGTG 1 cut(s) 233
PspN4I GGNNCC 4 cut(s) 250, 829, 918, 1297
PspPI GGNCC 4 cut(s) 889, 1030, 1096, 1184
PspPPI RGGWCCY 1 cut(s) 889
PstNI CAGNNNCTG 1 cut(s) 569
PsuI RGATCY 3 cut(s) 1102, 1295, 1307
PsyI GACNNNGTC 1 cut(s) 356
PvuII CAGCTG 1 cut(s) 863
RsaI GTAC 2 cut(s) 182, 1054
RsaNI GTAC 2 cut(s) 181, 1053
SacI GAGCTC 1 cut(s) 1278
SacII CCGCGG 1 cut(s) 382
SalI GTCGAC 1 cut(s) 359
SapI GCTCTTC 1 cut(s) 1462
SaqAI TTAA 2 cut(s) 1119, 1516
SatI GCNGC 6 cut(s) 270, 273, 337, 662, 849, 920
Sau96I GGNCC 4 cut(s) 889, 1030, 1096, 1184
ScaI AGTACT 1 cut(s) 1054
SchI GAGTC 2 cut(s) 591, 1401
ScrFI CCNGG 3 cut(s) 602, 676, 1082
SduI GDGCHC 1 cut(s) 1278
SfaNI GCATC 1 cut(s) 1327
SfcI CTRYAG 2 cut(s) 33, 176
SfiI GGCCNNNNNGGCC 1 cut(s) 261
SfoI GGCGCC 3 cut(s) 250, 829, 918
Sfr274I CTCGAG 2 cut(s) 746, 1389
Sfr303I CCGCGG 1 cut(s) 382
SfuI TTCGAA 1 cut(s) 87
SgrBI CCGCGG 1 cut(s) 382
SinI GGWCC 4 cut(s) 889, 1030, 1096, 1184
SlaI CTCGAG 2 cut(s) 746, 1389
SmlI CTYRAG 2 cut(s) 746, 1389
SmoI CTYRAG 2 cut(s) 746, 1389
SnaBI TACGTA 1 cut(s) 1411
Sse9I AATT 6 cut(s) 42, 155, 520, 842, 1340, 1512
SspDI GGCGCC 3 cut(s) 248, 827, 916
SspI AATATT 2 cut(s) 630, 1090
SspMI CTAG 3 cut(s) 266, 471, 962
SstI GAGCTC 1 cut(s) 1278
StyD4I CCNGG 3 cut(s) 600, 674, 1080
StyI CCWWGG 2 cut(s) 1215, 1299
TaaI ACNGT 5 cut(s) 180, 502, 1057, 1124, 1258
TaiI ACGT 4 cut(s) 235, 333, 1331, 1413
TasI AATT 6 cut(s) 42, 155, 520, 842, 1340, 1512
TatI WGTACW 1 cut(s) 1052
TauI GCSGC 4 cut(s) 272, 339, 851, 922
TfiI GAWTC 7 cut(s) 530, 686, 702, 866, 871, 1385, 1504
Tru1I TTAA 2 cut(s) 1119, 1516
Tru9I TTAA 2 cut(s) 1119, 1516
TseFI GTSAC 1 cut(s) 1426
TseI GCWGC 2 cut(s) 272, 661
Tsp45I GTSAC 1 cut(s) 1426
TspDTI ATGAA 7 cut(s) 54, 107, 385, 636, 763, 1038, 1361
TspGWI ACGGA 1 cut(s) 1164
Tth111I GACNNNGTC 1 cut(s) 356
VpaK11BI GGWCC 4 cut(s) 889, 1030, 1096, 1184
XagI CCTNNNNNAGG 1 cut(s) 816
XapI RAATTY 3 cut(s) 42, 155, 1340
XceI RCATGY 1 cut(s) 1153
XhoI CTCGAG 2 cut(s) 746, 1389
XmiI GTMKAC 1 cut(s) 360
XspI CTAG 3 cut(s) 266, 471, 962
ZraI GACGTC 1 cut(s) 331
ZrmI AGTACT 1 cut(s) 1054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.