MD03G1054600.v1.1

15-cis-phytoene desaturase, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0015456
Physical Location & Seq
Forward (+)
4355983 .. 4357446
1464 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1054600.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGAAACTGATCACTCTTCCTCTTCCACTCCCATCCACCACCACCGCCACCACCACCCTCCTCTCCCCCAAACCCCAACTCCTCCGCTTCAAATTCAAACCCCAATCATCTCTCCAGACAACTATCAACCCCCCAAAATCCCCATTCCCGCCAAACCCCAAGTCCCCTGTTATTATCATCGGCGGAGGACTCGCCGGCCTCGCCGCCGCCACCCACCTCAACTCCCAGAACACCCCTTTCCTCCTCCTCGAAGCCTCCGATGCCGTCGGCGGCCGCGTCCGAACTGACGTCGTCGACGGGTTCCTTCTCGACCGCGGCTTCCAAATCTTCATCACCGCTTACCCCGAAGCCCAGAAACTTCTCGACTACCAATCCCTCGACCTCCAGAAATTCTACTCCGGCGCCCGTATTTACTACGGAGGTAGTTTCCACACCGTCGCCGACCCCCTCCGGGATTTCTGGAACTCTATCAAGTCCCTCGCCAACCCGATCGGATCCATTCCCGATAAATTGCTCATCGGATTGACGAGATTTCGGGTTCTGACGAAATCCGACGACGAGATATTCTCCTCCGGCGATGAAGTCTCCACGATGGAGCTGCTGAGGGGAATCGGGTTCTCCGATTCGATCATCGCCCGATTCTTTCAGCCGTTTTTTGGCGGCGTTTTCTTCGACAAAGAGCTCGAAACAACTTCCAGATTGTTCAATTTCATCTTCAAGTGTCTCGCCCTCGGCGACAACACTCTCCCATCCAACGGCATTAGCGCCATCCCACAGCAATTGGCCGCGAAATTGCCGTCCGATTCGATCGTTCTCAATTCCCGAGTCGCTTCGATTGATTTCAGCGGCGACGAGTCTTCGTCGCCAAGTGTGATATTGGAGAGCGGAGAGGTTTTGAGAAGCGAGCTTGGAGTGATAGTGGCAGTTGAGCAACCGGAAGCGGATAAGCTTTTGGCGGGAAGGATAAGTGCACCGGTCCGGACCAAACCGGCTCGAAGTACAGTTTGCTTGTATTTCACAGCAGACCGGGCCAACATTCCGGTTTCTGACCCGGTTTTGTTTCTTAACGGGTCGGGCAAGGGCATTGTGAATAATATGTTTTTCGCAACCAATGTGGCTCCGTCTTATGGCCCACCCGATAAGGCTTTGGTATCGGTATCGCTTGTCGGAGGTTTTGAGGATGTGACGGATGATGATCTGACGACTGAAGTTGTTCATGAGCTCTCTGGCTGGTTTGGGGGATCAATGGTGGGATCTTGGAGACACTTGAGAACGTATCGGATTAAATTTGCGCAACCAAACCAATGTCCGCCGCTCGATTCGAAGAGAAACCCTCGGGTCGGGTCGGGTGTGTATGTGTGCGGTGACCATTGGACGACTGCCACATTTGATGGGGCGTTGGCGTCGGGAAAGAGAGCGGCAGAAGCTTTGCTTAGAGACAGTGCCTTGAATAGGGTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Amino_oxidase

Protein Analysis

488

Amino Acids

52.65

Weight (kDa)

6.55

Isoelectric Point (pI)

37.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAD_binding_8 PF13450 59 - 123 1.1e-14 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 64 - 478 3.3e-57 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015456)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09580
fragaria_vesca FvH4_3g40270
malus_domestica MD03G1054600.v1.1
prunus_persica Prupe.6G043200_v2.0.a1
pyrus_communis pycom03g04330
rosa_chinensis RchiOBHm_Chr5g0072531
rosa_laevigata RLG00000036310
rosa_multiflora Rmu_sc0002088.1_g000015 Rmu_sc0007873.1_g000006
rosa_roxburghii Rroxscaffold_1G00008610
rosa_rugosa Rorug05G0418900
rosa_samantha Rh5AG475400 Rh5BG495600 Rh5CG519400 Rh5DG507800
rosa_wichuraiana Rw5G044160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 291
Acc16I TGCGCA 1 cut(s) 1293
AccB1I GGYRCC 1 cut(s) 401
AccBSI CCGCTC 3 cut(s) 885, 1315, 1418
AccI GTMKAC 1 cut(s) 294
AccII CGCG 3 cut(s) 276, 315, 788
AccIII TCCGGA 1 cut(s) 978
AclWI GGATC 4 cut(s) 489, 502, 1249, 1261
AcoI YGGCCR 2 cut(s) 271, 783
AcsI RAATTY 3 cut(s) 92, 389, 1286
AcuI CTGAAG 1 cut(s) 1227
AcyI GRCGYC 3 cut(s) 288, 402, 1403
AfaI GTAC 1 cut(s) 1000
AfiI CCNNNNNNNGG 6 cut(s) 451, 656, 755, 1127, 1340, 1452
AgeI ACCGGT 1 cut(s) 973
AgsI TTSAA 5 cut(s) 91, 97, 706, 718, 1450
AluBI AGCT 6 cut(s) 598, 682, 907, 949, 1222, 1427
AluI AGCT 6 cut(s) 598, 682, 907, 949, 1222, 1427
Alw21I GWGCWC 3 cut(s) 684, 973, 1224
Alw26I GTCTC 4 cut(s) 589, 728, 1255, 1431
Alw44I GTGCAC 1 cut(s) 969
AlwI GGATC 4 cut(s) 489, 502, 1249, 1261
Ama87I CYCGRG 2 cut(s) 822, 1335
Aor13HI TCCGGA 1 cut(s) 978
AoxI GGCC 5 cut(s) 196, 271, 783, 1029, 1129
ApaLI GTGCAC 1 cut(s) 969
ApeKI GCWGC 1 cut(s) 598
ApoI RAATTY 3 cut(s) 92, 389, 1286
ArsI GACNNNNNNTTYG 4 cut(s) 146, 178, 782, 814
AsiGI ACCGGT 1 cut(s) 973
Asp700I GAANNNNTTC 1 cut(s) 1212
AspLEI GCGC 3 cut(s) 404, 767, 1294
AspS9I GGNCC 4 cut(s) 976, 981, 1029, 1130
AsuC2I CCSGG 3 cut(s) 452, 1028, 1052
AsuHPI GGTGA 2 cut(s) 325, 1376
AsuII TTCGAA 1 cut(s) 1322
AvaI CYCGRG 2 cut(s) 822, 1335
AvaII GGWCC 2 cut(s) 976, 981
BaeGI GKGCMC 1 cut(s) 973
BamHI GGATCC 1 cut(s) 494
BanI GGYRCC 1 cut(s) 401
BanII GRGCYC 2 cut(s) 684, 1224
BbsI GAAGAC 1 cut(s) 849
Bbv12I GWGCWC 3 cut(s) 684, 973, 1224
BbvCI CCTCAGC 1 cut(s) 602
BbvI GCAGC 1 cut(s) 585
BccI CCATC 5 cut(s) 40, 586, 757, 776, 1385
BceAI ACGGC 4 cut(s) 248, 634, 772, 781
BcgI CGANNNNNNTGC 2 cut(s) 580, 614
BclI TGATCA 1 cut(s) 9
BcnI CCSGG 3 cut(s) 452, 1028, 1052
BcoDI GTCTC 4 cut(s) 589, 728, 1255, 1431
BfoI RGCGCY 2 cut(s) 405, 768
Bme1390I CCNGG 3 cut(s) 452, 1028, 1052
Bme18I GGWCC 2 cut(s) 976, 981
BmeT110I CYCGRG 2 cut(s) 822, 1335
BmgT120I GGNCC 4 cut(s) 976, 981, 1029, 1130
BmiI GGNNCC 4 cut(s) 302, 403, 496, 1119
BmrFI CCNGG 3 cut(s) 452, 1028, 1052
BmsI GCATC 1 cut(s) 250
BpiI GAAGAC 1 cut(s) 849
BplI GAGNNNNNCTC 4 cut(s) 551, 583, 1318, 1350
BpmI CTGGAG 2 cut(s) 98, 368
Bpu10I CCTNAGC 1 cut(s) 602
Bpu14I TTCGAA 1 cut(s) 1322
BpuEI CTTGAG 1 cut(s) 1288
BpuMI CCSGG 3 cut(s) 452, 1028, 1052
BsaBI GATNNNNATC 1 cut(s) 1194
BsaHI GRCGYC 3 cut(s) 288, 402, 1403
BsaJI CCNNGG 3 cut(s) 313, 730, 1334
BsaWI WCCGGW 4 cut(s) 934, 973, 978, 1039
BsaXI ACNNNNNCTCC 6 cut(s) 63, 93, 206, 236, 903, 933
Bsc4I CCNNNNNNNGG 6 cut(s) 451, 656, 755, 1127, 1340, 1452
Bse118I RCCGGY 3 cut(s) 194, 973, 988
Bse8I GATNNNNATC 1 cut(s) 1194
BseAI TCCGGA 1 cut(s) 978
BseDI CCNNGG 3 cut(s) 313, 730, 1334
BseGI GGATG 5 cut(s) 32, 749, 768, 1186, 1195
BseJI GATNNNNATC 1 cut(s) 1194
BseLI CCNNNNNNNGG 6 cut(s) 451, 656, 755, 1127, 1340, 1452
BseMII CTCAG 1 cut(s) 593
BseRI GAGGAG 5 cut(s) 50, 71, 233, 236, 559
BseSI GKGCMC 1 cut(s) 973
BseX3I CGGCCG 1 cut(s) 271
BseXI GCAGC 1 cut(s) 585
Bsh1236I CGCG 3 cut(s) 276, 315, 788
Bsh1285I CGRYCG 4 cut(s) 274, 313, 492, 810
BshFI GGCC 5 cut(s) 198, 273, 785, 1031, 1131
BshNI GGYRCC 1 cut(s) 401
BshTI ACCGGT 1 cut(s) 973
BsiEI CGRYCG 4 cut(s) 274, 313, 492, 810
BsiHKAI GWGCWC 3 cut(s) 684, 973, 1224
BsiHKCI CYCGRG 2 cut(s) 822, 1335
BslFI GGGAC 2 cut(s) 148, 460
BslI CCNNNNNNNGG 6 cut(s) 451, 656, 755, 1127, 1340, 1452
BsmAI GTCTC 4 cut(s) 589, 728, 1255, 1431
BsmFI GGGAC 2 cut(s) 148, 460
BsnI GGCC 5 cut(s) 198, 273, 785, 1031, 1131
BsoBI CYCGRG 2 cut(s) 822, 1335
Bsp119I TTCGAA 1 cut(s) 1322
Bsp1286I GDGCHC 3 cut(s) 684, 973, 1224
Bsp13I TCCGGA 1 cut(s) 978
Bsp143I GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
BspANI GGCC 5 cut(s) 198, 273, 785, 1031, 1131
BspCNI CTCAG 1 cut(s) 594
BspEI TCCGGA 1 cut(s) 978
BspFNI CGCG 3 cut(s) 276, 315, 788
BspHI TCATGA 1 cut(s) 1216
BspLI GGNNCC 4 cut(s) 302, 403, 496, 1119
BspPI GGATC 4 cut(s) 489, 502, 1249, 1261
BspT104I TTCGAA 1 cut(s) 1322
BspT107I GGYRCC 1 cut(s) 401
BsrBI CCGCTC 3 cut(s) 885, 1315, 1418
BsrFI RCCGGY 3 cut(s) 194, 973, 988
BssAI RCCGGY 3 cut(s) 194, 973, 988
BssECI CCNNGG 3 cut(s) 313, 730, 1334
BssMI GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
BssNI GRCGYC 3 cut(s) 288, 402, 1403
Bst4CI ACNGT 3 cut(s) 436, 1003, 1442
Bst6I CTCTTC 3 cut(s) 21, 27, 1319
BstACI GRCGYC 3 cut(s) 288, 402, 1403
BstBI TTCGAA 1 cut(s) 1322
BstC8I GCNNGC 2 cut(s) 196, 905
BstDEI CTNAG 2 cut(s) 602, 1433
BstDSI CCRYGG 1 cut(s) 313
BstEII GGTNACC 1 cut(s) 1364
BstENI CCTNNNNNAGG 1 cut(s) 1450
BstF5I GGATG 5 cut(s) 32, 749, 768, 1186, 1195
BstFNI CGCG 3 cut(s) 276, 315, 788
BstH2I RGCGCY 2 cut(s) 405, 768
BstHHI GCGC 3 cut(s) 404, 767, 1294
BstKTI GATC 8 cut(s) 12, 492, 497, 630, 810, 1198, 1244, 1256
BstMAI GTCTC 4 cut(s) 589, 728, 1255, 1431
BstMBI GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
BstMCI CGRYCG 4 cut(s) 274, 313, 492, 810
BstMWI GCNNNNNNNGC 4 cut(s) 200, 260, 1028, 1424
BstPI GGTNACC 1 cut(s) 1364
BstSCI CCNGG 3 cut(s) 450, 1026, 1050
BstSLI GKGCMC 1 cut(s) 973
BstUI CGCG 3 cut(s) 276, 315, 788
BstV1I GCAGC 1 cut(s) 585
BstV2I GAAGAC 1 cut(s) 849
BstX2I RGATCY 2 cut(s) 494, 1253
BstYI RGATCY 2 cut(s) 494, 1253
BstZI CGGCCG 1 cut(s) 271
BsuRI GGCC 5 cut(s) 198, 273, 785, 1031, 1131
BtgI CCRYGG 1 cut(s) 313
BtgZI GCGATG 2 cut(s) 591, 616
BtsCI GGATG 5 cut(s) 32, 749, 768, 1186, 1195
BtsIMutI CAGTG 1 cut(s) 1447
Cac8I GCNNGC 2 cut(s) 196, 905
CciI TCATGA 1 cut(s) 1216
CciNI GCGGCCGC 1 cut(s) 271
CfoI GCGC 3 cut(s) 404, 767, 1294
Cfr10I RCCGGY 3 cut(s) 194, 973, 988
Cfr13I GGNCC 4 cut(s) 976, 981, 1029, 1130
Cfr42I CCGCGG 1 cut(s) 316
CpoI CGGWCCG 1 cut(s) 976
CseI GACGC 2 cut(s) 265, 1392
Csp6I GTAC 1 cut(s) 999
CspAI ACCGGT 1 cut(s) 973
CspCI CAANNNNNGTGG 4 cut(s) 762, 797, 1095, 1130
CspI CGGWCCG 1 cut(s) 976
CviAII CATG 1 cut(s) 1217
CviQI GTAC 1 cut(s) 999
DdeI CTNAG 2 cut(s) 602, 1433
DinI GGCGCC 1 cut(s) 403
DpnI GATC 8 cut(s) 11, 491, 496, 629, 809, 1197, 1243, 1255
DpnII GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
EaeI YGGCCR 2 cut(s) 271, 783
EagI CGGCCG 1 cut(s) 271
Eam1104I CTCTTC 3 cut(s) 21, 27, 1319
EarI CTCTTC 3 cut(s) 21, 27, 1319
EciI GGCGGA 2 cut(s) 198, 1299
Ecl136II GAGCTC 2 cut(s) 682, 1222
EclXI CGGCCG 1 cut(s) 271
Eco24I GRGCYC 2 cut(s) 684, 1224
Eco47I GGWCC 2 cut(s) 976, 981
Eco52I CGGCCG 1 cut(s) 271
Eco53kI GAGCTC 2 cut(s) 682, 1222
Eco57I CTGAAG 1 cut(s) 1227
Eco88I CYCGRG 2 cut(s) 822, 1335
Eco91I GGTNACC 1 cut(s) 1364
EcoICRI GAGCTC 2 cut(s) 682, 1222
EcoNI CCTNNNNNAGG 1 cut(s) 1450
EcoO65I GGTNACC 1 cut(s) 1364
EcoT38I GRGCYC 2 cut(s) 684, 1224
EgeI GGCGCC 1 cut(s) 403
EheI GGCGCC 1 cut(s) 403
FaeI CATG 1 cut(s) 1220
FaiI YATR 4 cut(s) 1097, 1128, 1218, 1356
FalI AAGNNNNNCTT 2 cut(s) 1416, 1448
FaqI GGGAC 2 cut(s) 148, 460
FatI CATG 1 cut(s) 1216
FauI CCCGC 2 cut(s) 156, 949
FbaI TGATCA 1 cut(s) 9
FblI GTMKAC 1 cut(s) 294
FokI GGATG 5 cut(s) 19, 736, 755, 1193, 1202
FriOI GRGCYC 2 cut(s) 684, 1224
FspI TGCGCA 1 cut(s) 1293
GlaI GCGC 3 cut(s) 403, 766, 1293
GsuI CTGGAG 2 cut(s) 98, 368
HaeII RGCGCY 2 cut(s) 405, 768
HaeIII GGCC 5 cut(s) 198, 273, 785, 1031, 1131
HgaI GACGC 2 cut(s) 265, 1392
HhaI GCGC 3 cut(s) 404, 767, 1294
Hin1I GRCGYC 3 cut(s) 288, 402, 1403
Hin1II CATG 1 cut(s) 1220
Hin6I GCGC 3 cut(s) 402, 765, 1292
HinP1I GCGC 3 cut(s) 402, 765, 1292
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HindIII AAGCTT 2 cut(s) 947, 1425
HinfI GANTC 8 cut(s) 189, 609, 623, 639, 803, 825, 854, 1319
HphI GGTGA 2 cut(s) 325, 1376
Hpy166II GTNNAC 2 cut(s) 295, 971
Hpy8I GTNNAC 2 cut(s) 295, 971
HpyAV CCTTC 2 cut(s) 314, 954
HpyCH4III ACNGT 3 cut(s) 436, 1003, 1442
HpyCH4IV ACGT 2 cut(s) 288, 1274
HpyCH4V TGCA 1 cut(s) 971
HpyF10VI GCNNNNNNNGC 4 cut(s) 200, 260, 1028, 1424
HpyF3I CTNAG 2 cut(s) 602, 1433
HpySE526I ACGT 2 cut(s) 288, 1274
Hsp92I GRCGYC 3 cut(s) 288, 402, 1403
Hsp92II CATG 1 cut(s) 1220
HspAI GCGC 3 cut(s) 402, 765, 1292
KasI GGCGCC 1 cut(s) 401
Kpn2I TCCGGA 1 cut(s) 978
KroI GCCGGC 1 cut(s) 194
KroNI GCCGGC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 9
KspI CCGCGG 1 cut(s) 316
Kzo9I GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
LmnI GCTCC 2 cut(s) 595, 1123
Lsp1109I GCAGC 1 cut(s) 585
LweI GCATC 1 cut(s) 250
MaeII ACGT 2 cut(s) 288, 1274
MaeIII GTNAC 2 cut(s) 1183, 1364
MalI GATC 8 cut(s) 11, 491, 496, 629, 809, 1197, 1243, 1255
MbiI CCGCTC 3 cut(s) 885, 1315, 1418
MboI GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
MboII GAAGA 7 cut(s) 8, 14, 319, 661, 706, 849, 1336
MfeI CAATTG 1 cut(s) 779
MflI RGATCY 2 cut(s) 494, 1253
MhlI GDGCHC 3 cut(s) 684, 973, 1224
MluCI AATT 8 cut(s) 92, 389, 509, 706, 779, 791, 817, 1286
Mly113I GGCGCC 1 cut(s) 402
MlyI GAGTC 3 cut(s) 183, 834, 863
MmeI TCCRAC 3 cut(s) 576, 777, 1147
MroI TCCGGA 1 cut(s) 978
MroNI GCCGGC 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 1212
MseI TTAA 2 cut(s) 1065, 1284
MspA1I CMGCKG 2 cut(s) 315, 846
MspR9I CCNGG 3 cut(s) 452, 1028, 1052
MunI CAATTG 1 cut(s) 779
MvnI CGCG 3 cut(s) 276, 315, 788
MwoI GCNNNNNNNGC 4 cut(s) 200, 260, 1028, 1424
NaeI GCCGGC 1 cut(s) 196
NarI GGCGCC 1 cut(s) 402
NciI CCSGG 3 cut(s) 452, 1028, 1052
NdeII GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
NgoMIV GCCGGC 1 cut(s) 194
NlaIII CATG 1 cut(s) 1220
NlaIV GGNNCC 4 cut(s) 302, 403, 496, 1119
NmeAIII GCCGAG 1 cut(s) 711
NmuCI GTSAC 2 cut(s) 1183, 1364
NotI GCGGCCGC 1 cut(s) 271
NsbI TGCGCA 1 cut(s) 1293
NspV TTCGAA 1 cut(s) 1322
PagI TCATGA 1 cut(s) 1216
PcsI WCGNNNNNNNCGW 4 cut(s) 255, 273, 618, 732
PdiI GCCGGC 1 cut(s) 196
PdmI GAANNNNTTC 1 cut(s) 1212
PfeI GAWTC 5 cut(s) 609, 623, 639, 803, 1319
PflFI GACNNNGTC 1 cut(s) 290
PfoI TCCNGGA 1 cut(s) 450
PinAI ACCGGT 1 cut(s) 973
Ple19I CGATCG 2 cut(s) 492, 810
PleI GAGTC 3 cut(s) 183, 833, 862
PluTI GGCGCC 1 cut(s) 405
PpsI GAGTC 3 cut(s) 183, 833, 862
Psp124BI GAGCTC 2 cut(s) 684, 1224
PspEI GGTNACC 1 cut(s) 1364
PspN4I GGNNCC 4 cut(s) 302, 403, 496, 1119
PspPI GGNCC 4 cut(s) 976, 981, 1029, 1130
PsuI RGATCY 2 cut(s) 494, 1253
PsyI GACNNNGTC 1 cut(s) 290
PvuI CGATCG 2 cut(s) 492, 810
RsaI GTAC 1 cut(s) 1000
RsaNI GTAC 1 cut(s) 999
Rsr2I CGGWCCG 1 cut(s) 976
RsrII CGGWCCG 1 cut(s) 976
SacI GAGCTC 2 cut(s) 684, 1224
SacII CCGCGG 1 cut(s) 316
SalI GTCGAC 1 cut(s) 293
SaqAI TTAA 2 cut(s) 1065, 1284
Sau3AI GATC 8 cut(s) 9, 489, 494, 627, 807, 1195, 1241, 1253
Sau96I GGNCC 4 cut(s) 976, 981, 1029, 1130
SchI GAGTC 3 cut(s) 183, 834, 863
ScrFI CCNGG 3 cut(s) 452, 1028, 1052
SduI GDGCHC 3 cut(s) 684, 973, 1224
SfaNI GCATC 1 cut(s) 250
SfoI GGCGCC 1 cut(s) 403
Sfr303I CCGCGG 1 cut(s) 316
SfuI TTCGAA 1 cut(s) 1322
SgrBI CCGCGG 1 cut(s) 316
SgrDI CGTCGACG 1 cut(s) 293
SinI GGWCC 2 cut(s) 976, 981
SmlI CTYRAG 1 cut(s) 1267
SmoI CTYRAG 1 cut(s) 1267
Sse9I AATT 8 cut(s) 92, 389, 509, 706, 779, 791, 817, 1286
SspDI GGCGCC 1 cut(s) 401
SstI GAGCTC 2 cut(s) 684, 1224
StyD4I CCNGG 3 cut(s) 450, 1026, 1050
TaaI ACNGT 3 cut(s) 436, 1003, 1442
TaiI ACGT 2 cut(s) 291, 1277
TasI AATT 8 cut(s) 92, 389, 509, 706, 779, 791, 817, 1286
TatI WGTACW 1 cut(s) 998
TfiI GAWTC 5 cut(s) 609, 623, 639, 803, 1319
Tru1I TTAA 2 cut(s) 1065, 1284
Tru9I TTAA 2 cut(s) 1065, 1284
TscAI CASTG 1 cut(s) 1447
TseFI GTSAC 2 cut(s) 1183, 1364
TseI GCWGC 1 cut(s) 598
Tsp45I GTSAC 2 cut(s) 1183, 1364
TspDTI ATGAA 5 cut(s) 17, 319, 594, 700, 1205
TspGWI ACGGA 3 cut(s) 432, 1110, 1202
TspRI CASTG 1 cut(s) 1447
Tth111I GACNNNGTC 1 cut(s) 290
VneI GTGCAC 1 cut(s) 969
VpaK11BI GGWCC 2 cut(s) 976, 981
XagI CCTNNNNNAGG 1 cut(s) 1450
XapI RAATTY 3 cut(s) 92, 389, 1286
XmiI GTMKAC 1 cut(s) 294
XmnI GAANNNNTTC 1 cut(s) 1212
ZraI GACGTC 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.