FvH4_3g43610

Disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0018015
Physical Location & Seq
Reverse (-)
36330097 .. 36334528
4432 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43610.t1

Sequence Viewer

Length: 3234 bp
ATGGCCTCCAGCTCCCAAGTAACCTCTGGATCTCCTACTTCATCGGATCCATGTTGGAAGTATGATGTGTTTTTGAGTTTCAGGGGCATTGACACTCGCAAGGGTATCACAATCGACATATACGATGGACTCAATCGGAGAGGCATTAAAGCATTCATGGATGATCCAGATCTTAAAGTCGGGGATGCTATTTCTCGCACGCTCATAGAAGCAATTGAAGGGTCAAGGTTTGCAATTGTTGTTCTCTCGCAGAACTATGCTTCTTCTACTTGGTGTTTGGAGGAACTTAGAGAGATTTGTGAGTGCATGAAAGACCAGAGCAGAATTTTGCCACTTTTTTACCATGTTGATCCTACTGATGTTCGATATCAGAAGAGGAGTTTTGAAGAAGCTTTCTCTAATCATGAAACCTCTGGGAGACATGGAACAGAGAAGGTGAAGCAATGGAGAGATGCTTTAAACAAAGTGGCCAATTTCTCCGGGTGGAATACAAATGATTACAAGACTCACAAAGAACTTGTTAACGTCATTGTGGAATTTGTCAGCACGAAAGTTGTACCTGATGCAATTGAGTCCACAGGAGATTTCAAAGTGTTTAAAGCAACAAGACAGGCCATGGATGAGGTTCAGGAAGCCCTTAAAGAGTACAACGTCACTGCCATTGGTGTCTACGGCATGGGAGGAGTTGGCAAGACAACCTTGGTGGAACATGTCAGTGCACAAGCCCGGAAAAGTGGGAGTTTTGATTATGTGACTAAGTGTGTCGTATCCCAAAATCCTAGTTTTGGAATCCTTCAAGACGCATTGGCAGAGCAGTTGGGCTTCAAATTACATGAGGAAACAGAAATTGGAAGATCCGCTAGGTTGCATAAGGAGATAATGAGACGAACAAAGATTCTTATAATCCTGGACGATATTTGGGAGGGAATGAAGTTATCAAGAGTAGGAATTCCAAGCCACAAGGAACTTCAAAAGTGTAATTCCAAAGTCCTACTGACCACAAGGATAAGGAATGTTTGTCATGCCATGGAGTGCCAAAGAAAGATCACACTCAACATTCTCTCAGAACAAGATTCTTGGGCCTTGTTTGTGAGCAAAGCAAGAAAGTCTTTCGAGTCGTCCACTTTCGAGGATGTGGCAAAGAAGGTTGCTGGAGAATGTAGAGGTCTACCGATTGCATTGGTCACAGTTGCAAGGGCGCTCGGAGATAAAGAGTTGGTGGATTGGAGGAGAGCAGCTCAGCGACTAGAGAAGTCGCAGACTGCCAACCCTGATGATAAGGGAGAAGCATTTAAATGTATAAAATTAAGCTATGATTACTTGGAAGATGAGGACTACAAGTCATACTTCTTGCTCTGTTGCTTATTCGCAGAAGACTATGACATCCCTATAAAAGACTTGTTCAGGTATGGGATCAGAACAAGATTGTTTCGAGATGCCGAAACACTCATGGAGGCAAGAGAGGAAGCTGATTCCGTTGTCAAGCATCTGAAATATTCTTGCTTGCTTTTGGATAGTGAAAAAGATGGATGCGTAATGATGCATGATGTTGTCCGGGATGCAGCCATTCAAATTGTGCAATCTGAAGATGAGTTTTTTGTGAAAACCGGCTGTGGTTTAGAGGATTGGCCACGTAATTTACATACAGGCTACCTTGCAATCTCACTAATGTGGAATTATATTAGCAAGCTTCCCAAAAATCTGGTATGTCCAAAACTCCAGATTTTGTTACTAAACCGTAATTTCTTTTTAAAAGATATACCAGAAACTTTCTTCCAATGTCCAAATGAATTAAGGGTATTAGATCTTAGCTTGACTAGCCTTTCATTACTGCCCAAATCATTCGCTCTCCTAACCAACCTCACAGCTTTGTATTTAGATGATATTGGCCTTCTAAGAATTGACACTTCCATACTGGGAAAACTTAAAAAGCTTGAGATGCTGAGTATGAGAAATTTACGTCTGTATGAGTTGTCGGTGGAAATAGGAGGTTTGACCAATCTGAGGATGTTGGATATTACTGGTACGGTTATTTATAGAATTCCCTCCAAACTGATATCAAAGTTGCATGATTTAGAAGAACTGTATATGCAAGGATTTTGGGAGTGGGAGCGCTTGGTGCCTAACGCTGAGGGAGAAGGAGAAGTCGATGATACCTTTACTAATGCTAGCTTTGACGAGGTAACTAGCTTGTCAAAATTAAGAGTTTTGAAGGTTACAATCAGGGGTGATGAATATATCCCTAAATATGTTGAGCTGAAAATGAATTTGGTTGAGTTTGATATATGTATTGGTGGTTTCTACGAGCCAGACAAGACGAAGTTACATGATCGACATCGTCATATCTCAATACGCTGGGATGTCATGATCAGTCACTTACCGGAGTGGTTTCGCGACGAGATAATGAAGAAAGCAGAGACGCTTCGCCACTATCAGTGCCAAAGGTTAATCGACATATTTGTGGAATCTGAGCATGGGAGGTTACAGGGACTGAAGCATCTGCATATAGTGGGTTCCAGTATTCAAGACATCACGGAGGCGGATCCCGCAATAACATGGGTTCCAAGAAAGCCTGTGTTGGAGAATTTGGAAGAGTTGCATCTGGATCAAGTGGATTGTGCAGAGTTGTGTGCCGATCAAGTGGATTGGTCTCTATTCAAGTTGAAGGTATTGAAGGTAAAAGATTGTTACAACTGGGGGAATATACTTTTACCATCTACATTGTTAGAGAGACTACCAAATTTGGAAGAATTAATTGTTCGTTGGACGGACGGGAGTGAATATATGTTTGGGTATGAAGCCTTGCTTGTGTTGCGACAATTAAAGTTGAAAAAGATAAAATTGTATGGTCTAGCAACAGTAAGCATATGTGAGGGACCTGCTCCGCCTGCGATGCTCCAGAATCTTCAAAGTTTGTCCATTACCAAATGCAAGTTGGAGGGAAGTCTCTTCACCTCTGATGTTGCTCAGTGTCTTTCTCAGTTGAATTCCTTAGAATTAAGGATATGCCCACTGTTGGAAAGGATAGTTGAAGCAAGCAACAAGAAGACCGTCTTTCCAAAATTGAAGCGATTACATTTGGAGGGACTTCCAATGTTGTACTATGAAAGTGCTACTTTTGATATTGAGTGTCCTGAATTGGAAGAGTGCTTTCTGCGGAGGTGCCCCAAGTTTTCAGCCTCTTCATTTGACTTCCACAGCAGGAAACAAGTCCAATTCAGACGGTACTTATAG

Protein Analysis

1078

Amino Acids

123.59

Weight (kDa)

6.03

Isoelectric Point (pI)

39.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 20 - 186 2.7e-46 TIR domain
TIR_2 PF13676 23 - 118 2.2e-15 TIR domain
NB-ARC PF00931 204 - 368 2.3e-32 NB-ARC domain
LRR_8 PF13855 571 - 627 5e-07 Leucine rich repeat
LRR_14 PF23598 635 - 803 4.1e-10 Leucine-rich repeat region
LRR_RPS2 PF23247 862 - 1003 1.2e-17 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 951 - 1033 1.8e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 902
Acc36I ACCTGC 1 cut(s) 2887
AccB1I GGYRCC 2 cut(s) 2119, 3162
AccI GTMKAC 2 cut(s) 669, 1168
AccII CGCG 1 cut(s) 2394
AciI CCGC 5 cut(s) 858, 2540, 2547, 2885, 3157
AcoI YGGCCR 2 cut(s) 468, 1628
AcsI RAATTY 9 cut(s) 324, 536, 948, 1954, 2040, 2266, 2584, 2740, 2986
AcuI CTGAAG 2 cut(s) 1605, 2513
AfaI GTAC 5 cut(s) 558, 647, 2026, 3101, 3227
AfeI AGCGCT 1 cut(s) 2114
AfiI CCNNNNNNNGG 3 cut(s) 785, 2004, 3016
AflIII ACRYGT 1 cut(s) 709
AhdI GACNNNNNGTC 1 cut(s) 1339
AjnI CCWGG 1 cut(s) 906
AjuI GAANNNNNNNTTGG 6 cut(s) 831, 863, 2252, 2284, 2772, 2804
AleI CACNNNNGTG 1 cut(s) 1669
Alw21I GWGCWC 1 cut(s) 721
Alw26I GTCTC 6 cut(s) 412, 877, 2411, 2655, 2725, 2951
Alw44I GTGCAC 1 cut(s) 717
AlwNI CAGNNNCTG 1 cut(s) 2491
Aor51HI AGCGCT 1 cut(s) 2114
AoxI GGCC 6 cut(s) 3, 468, 612, 1080, 1628, 1888
ApaLI GTGCAC 1 cut(s) 717
ApeKI GCWGC 2 cut(s) 1235, 1562
ApoI RAATTY 9 cut(s) 324, 536, 948, 1954, 2040, 2266, 2584, 2740, 2986
AseI ATTAAT 1 cut(s) 2753
AspLEI GCGC 2 cut(s) 1201, 2115
AspS9I GGNCC 2 cut(s) 1080, 2876
AsuC2I CCSGG 3 cut(s) 481, 727, 1556
AsuHPI GGTGA 3 cut(s) 448, 2240, 2944
AsuNHI GCTAGC 1 cut(s) 2168
AvaII GGWCC 1 cut(s) 2876
BaeGI GKGCMC 2 cut(s) 721, 3167
BalI TGGCCA 2 cut(s) 470, 1630
BamHI GGATCC 2 cut(s) 46, 2542
BanI GGYRCC 2 cut(s) 2119, 3162
BbsI GAAGAC 2 cut(s) 1380, 3053
Bbv12I GWGCWC 1 cut(s) 721
BbvCI CCTCAGC 1 cut(s) 2130
BbvI GCAGC 2 cut(s) 1247, 1574
BccI CCATC 3 cut(s) 119, 1520, 2722
BceAI ACGGC 1 cut(s) 688
BciT130I CCWGG 1 cut(s) 908
BciVI GTATCC 1 cut(s) 778
BclI TGATCA 1 cut(s) 2367
BcnI CCSGG 3 cut(s) 481, 727, 1556
BcoDI GTCTC 6 cut(s) 412, 877, 2411, 2655, 2725, 2951
BfaI CTAG 7 cut(s) 780, 861, 1247, 1818, 2169, 2187, 2852
BfoI RGCGCY 2 cut(s) 1202, 2116
BfuAI ACCTGC 1 cut(s) 2887
BfuI GTATCC 1 cut(s) 778
BglII AGATCT 2 cut(s) 169, 1804
BisI GCNGC 2 cut(s) 1236, 1563
BlpI GCTNAGC 1 cut(s) 1239
BlsI GCNGC 2 cut(s) 1237, 1564
Bme1390I CCNGG 4 cut(s) 481, 727, 908, 1556
Bme18I GGWCC 1 cut(s) 2876
BmeRI GACNNNNNGTC 1 cut(s) 1339
BmgT120I GGNCC 2 cut(s) 1080, 2876
BmiI GGNNCC 7 cut(s) 48, 2121, 2515, 2544, 2562, 2877, 3164
BmrFI CCNGG 4 cut(s) 481, 727, 908, 1556
BmrI ACTGGG 2 cut(s) 1925, 2704
BmtI GCTAGC 1 cut(s) 2172
BmuI ACTGGG 2 cut(s) 1925, 2704
BpiI GAAGAC 2 cut(s) 1380, 3053
BplI GAGNNNNNCTC 2 cut(s) 1222, 1254
BpmI CTGGAG 3 cut(s) 1173, 1703, 2882
Bpu10I CCTNAGC 1 cut(s) 2130
Bpu1102I GCTNAGC 1 cut(s) 1239
BpuEI CTTGAG 1 cut(s) 1955
BpuMI CCSGG 3 cut(s) 481, 727, 1556
BsaAI YACGTR 1 cut(s) 1634
BsaBI GATNNNNATC 2 cut(s) 168, 2334
BsaI GGTCTC 1 cut(s) 2655
BsaJI CCNNGG 3 cut(s) 615, 699, 1026
BsaWI WCCGGW 1 cut(s) 2380
Bsc4I CCNNNNNNNGG 3 cut(s) 785, 2004, 3016
Bse118I RCCGGY 1 cut(s) 1607
Bse1I ACTGG 4 cut(s) 1920, 2026, 2517, 2699
Bse3DI GCAATG 1 cut(s) 449
Bse8I GATNNNNATC 2 cut(s) 168, 2334
BseBI CCWGG 1 cut(s) 908
BseDI CCNNGG 3 cut(s) 615, 699, 1026
BseGI GGATG 9 cut(s) 166, 190, 625, 1138, 1383, 1535, 1564, 2013, 2365
BseJI GATNNNNATC 2 cut(s) 168, 2334
BseLI CCNNNNNNNGG 3 cut(s) 785, 2004, 3016
BseMI GCAATG 1 cut(s) 449
BseMII CTCAG 8 cut(s) 1077, 1253, 1934, 1994, 2121, 2460, 2981, 2993
BseNI ACTGG 4 cut(s) 1920, 2026, 2517, 2699
BseRI GAGGAG 3 cut(s) 391, 696, 1243
BseSI GKGCMC 2 cut(s) 721, 3167
BseXI GCAGC 2 cut(s) 1247, 1574
BseYI CCCAGC 1 cut(s) 2355
BsgI GTGCAG 1 cut(s) 2640
Bsh1236I CGCG 1 cut(s) 2394
BshFI GGCC 6 cut(s) 5, 470, 614, 1082, 1630, 1890
BshNI GGYRCC 2 cut(s) 2119, 3162
BsiHKAI GWGCWC 1 cut(s) 721
BsiSI CCGG 5 cut(s) 480, 727, 1555, 1608, 2381
BslFI GGGAC 3 cut(s) 2502, 2889, 3099
BslI CCNNNNNNNGG 3 cut(s) 785, 2004, 3016
BsmAI GTCTC 6 cut(s) 412, 877, 2411, 2655, 2725, 2951
BsmBI CGTCTC 2 cut(s) 877, 2411
BsmFI GGGAC 3 cut(s) 2502, 2889, 3099
BsmI GAATGC 1 cut(s) 152
BsnI GGCC 6 cut(s) 5, 470, 614, 1082, 1630, 1890
Bso31I GGTCTC 1 cut(s) 2655
Bsp1286I GDGCHC 2 cut(s) 721, 3167
Bsp1720I GCTNAGC 1 cut(s) 1239
Bsp19I CCATGG 2 cut(s) 615, 1026
Bsp68I TCGCGA 1 cut(s) 2394
BspACI CCGC 5 cut(s) 858, 2540, 2547, 2885, 3157
BspANI GGCC 6 cut(s) 5, 470, 614, 1082, 1630, 1890
BspCNI CTCAG 8 cut(s) 1076, 1252, 1935, 1995, 2122, 2461, 2980, 2992
BspFNI CGCG 1 cut(s) 2394
BspHI TCATGA 2 cut(s) 403, 2364
BspLI GGNNCC 7 cut(s) 48, 2121, 2515, 2544, 2562, 2877, 3164
BspMI ACCTGC 1 cut(s) 2887
BspOI GCTAGC 1 cut(s) 2172
BspT107I GGYRCC 2 cut(s) 2119, 3162
BspTNI GGTCTC 1 cut(s) 2655
BsrDI GCAATG 1 cut(s) 449
BsrFI RCCGGY 1 cut(s) 1607
BsrI ACTGG 4 cut(s) 1920, 2026, 2517, 2699
BssAI RCCGGY 1 cut(s) 1607
BssECI CCNNGG 3 cut(s) 615, 699, 1026
BssT1I CCWWGG 3 cut(s) 615, 699, 1026
Bst2UI CCWGG 1 cut(s) 908
Bst4CI ACNGT 8 cut(s) 1189, 1739, 2029, 2085, 2860, 3015, 3052, 3225
Bst6I CTCTTC 5 cut(s) 368, 2586, 2954, 3138, 3187
BstBAI YACGTR 1 cut(s) 1634
BstC8I GCNNGC 6 cut(s) 200, 1505, 1688, 2170, 2889, 3037
BstDSI CCRYGG 2 cut(s) 615, 1026
BstF5I GGATG 9 cut(s) 166, 190, 625, 1138, 1383, 1535, 1564, 2013, 2365
BstFNI CGCG 1 cut(s) 2394
BstH2I RGCGCY 2 cut(s) 1202, 2116
BstHHI GCGC 2 cut(s) 1201, 2115
BstMAI GTCTC 6 cut(s) 412, 877, 2411, 2655, 2725, 2951
BstMWI GCNNNNNNNGC 7 cut(s) 1818, 1939, 2119, 2546, 2812, 2888, 2893
BstNI CCWGG 1 cut(s) 908
BstNSI RCATGY 1 cut(s) 713
BstSCI CCNGG 4 cut(s) 479, 725, 906, 1554
BstSLI GKGCMC 2 cut(s) 721, 3167
BstUI CGCG 1 cut(s) 2394
BstV1I GCAGC 2 cut(s) 1247, 1574
BstV2I GAAGAC 2 cut(s) 1380, 3053
BstX2I RGATCY 6 cut(s) 29, 46, 169, 854, 1804, 2542
BstXI CCANNNNNNTGG 1 cut(s) 1702
BstYI RGATCY 6 cut(s) 29, 46, 169, 854, 1804, 2542
BsuI GTATCC 1 cut(s) 778
BsuRI GGCC 6 cut(s) 5, 470, 614, 1082, 1630, 1890
BtgI CCRYGG 2 cut(s) 615, 1026
BtgZI GCGATG 1 cut(s) 2906
BtsCI GGATG 9 cut(s) 166, 190, 625, 1138, 1383, 1535, 1564, 2013, 2365
BtsI GCAGTG 1 cut(s) 654
BtsIMutI CAGTG 5 cut(s) 654, 721, 2441, 2975, 3011
BtuMI TCGCGA 1 cut(s) 2394
BveI ACCTGC 1 cut(s) 2887
Cac8I GCNNGC 6 cut(s) 200, 1505, 1688, 2170, 2889, 3037
CaiI CAGNNNCTG 1 cut(s) 2491
CciI TCATGA 2 cut(s) 403, 2364
CfoI GCGC 2 cut(s) 1201, 2115
Cfr10I RCCGGY 1 cut(s) 1607
Cfr13I GGNCC 2 cut(s) 1080, 2876
CseI GACGC 2 cut(s) 809, 2428
Csp6I GTAC 5 cut(s) 557, 646, 2025, 3100, 3226
CspCI CAANNNNNGTGG 2 cut(s) 684, 719
CviQI GTAC 5 cut(s) 557, 646, 2025, 3100, 3226
DraI TTTAAA 4 cut(s) 459, 598, 1294, 1752
DriI GACNNNNNGTC 1 cut(s) 1339
EaeI YGGCCR 2 cut(s) 468, 1628
Eam1104I CTCTTC 5 cut(s) 368, 2586, 2954, 3138, 3187
Eam1105I GACNNNNNGTC 1 cut(s) 1339
EarI CTCTTC 5 cut(s) 368, 2586, 2954, 3138, 3187
EciI GGCGGA 2 cut(s) 2555, 2874
Eco130I CCWWGG 3 cut(s) 615, 699, 1026
Eco31I GGTCTC 1 cut(s) 2655
Eco32I GATATC 2 cut(s) 368, 2058
Eco47I GGWCC 1 cut(s) 2876
Eco47III AGCGCT 1 cut(s) 2114
Eco57I CTGAAG 2 cut(s) 1605, 2513
EcoO109I RGGNCCY 1 cut(s) 2876
EcoRI GAATTC 3 cut(s) 948, 2040, 2986
EcoRII CCWGG 1 cut(s) 906
EcoRV GATATC 2 cut(s) 368, 2058
EcoT14I CCWWGG 3 cut(s) 615, 699, 1026
EcoT22I ATGCAT 1 cut(s) 1545
ErhI CCWWGG 3 cut(s) 615, 699, 1026
Esp3I CGTCTC 2 cut(s) 877, 2411
FaqI GGGAC 3 cut(s) 2502, 2889, 3099
FauI CCCGC 1 cut(s) 2554
FauNDI CATATG 1 cut(s) 2867
FbaI TGATCA 1 cut(s) 2367
FblI GTMKAC 2 cut(s) 669, 1168
Fnu4HI GCNGC 2 cut(s) 1236, 1563
FokI GGATG 9 cut(s) 173, 197, 632, 1145, 1370, 1542, 1571, 2020, 2372
Fsp4HI GCNGC 2 cut(s) 1236, 1563
FspBI CTAG 7 cut(s) 780, 861, 1247, 1818, 2169, 2187, 2852
GlaI GCGC 2 cut(s) 1200, 2114
GluI GCNGC 2 cut(s) 1236, 1563
GsaI CCCAGC 1 cut(s) 2359
GsuI CTGGAG 3 cut(s) 1173, 1703, 2882
HaeII RGCGCY 2 cut(s) 1202, 2116
HaeIII GGCC 6 cut(s) 5, 470, 614, 1082, 1630, 1890
HapII CCGG 5 cut(s) 480, 727, 1555, 1608, 2381
HgaI GACGC 2 cut(s) 809, 2428
HhaI GCGC 2 cut(s) 1201, 2115
Hin6I GCGC 2 cut(s) 1199, 2113
HinP1I GCGC 2 cut(s) 1199, 2113
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HindIII AAGCTT 3 cut(s) 390, 1688, 1931
HpaI GTTAAC 1 cut(s) 523
HpaII CCGG 5 cut(s) 480, 727, 1555, 1608, 2381
HphI GGTGA 3 cut(s) 448, 2240, 2944
Hpy166II GTNNAC 6 cut(s) 523, 576, 670, 719, 1122, 1169
Hpy8I GTNNAC 6 cut(s) 523, 576, 670, 719, 1122, 1169
Hpy99I CGWCG 1 cut(s) 2399
HpyAV CCTTC 9 cut(s) 212, 427, 803, 1138, 1901, 2132, 2206, 2659, 2668
HpyCH4III ACNGT 8 cut(s) 1189, 1739, 2029, 2085, 2860, 3015, 3052, 3225
HpyCH4IV ACGT 4 cut(s) 525, 651, 1633, 1960
HpyF10VI GCNNNNNNNGC 7 cut(s) 1818, 1939, 2119, 2546, 2812, 2888, 2893
HpySE526I ACGT 4 cut(s) 525, 651, 1633, 1960
HspAI GCGC 2 cut(s) 1199, 2113
Ksp22I TGATCA 1 cut(s) 2367
KspAI GTTAAC 1 cut(s) 523
LmnI GCTCC 4 cut(s) 17, 2110, 2887, 2901
Lsp1109I GCAGC 2 cut(s) 1247, 1574
MaeI CTAG 7 cut(s) 780, 861, 1247, 1818, 2169, 2187, 2852
MaeII ACGT 4 cut(s) 525, 651, 1633, 1960
MfeI CAATTG 3 cut(s) 213, 234, 567
MflI RGATCY 6 cut(s) 29, 46, 169, 854, 1804, 2542
MhlI GDGCHC 2 cut(s) 721, 3167
MlsI TGGCCA 2 cut(s) 470, 1630
MluNI TGGCCA 2 cut(s) 470, 1630
MlyI GAGTC 4 cut(s) 123, 499, 581, 1124
MmeI TCCRAC 6 cut(s) 35, 1992, 2559, 2744, 2916, 2997
Mox20I TGGCCA 2 cut(s) 470, 1630
Mph1103I ATGCAT 1 cut(s) 1545
MscI TGGCCA 2 cut(s) 470, 1630
MslI CAYNNNNRTG 4 cut(s) 714, 1294, 1669, 2459
Msp20I TGGCCA 2 cut(s) 470, 1630
MspI CCGG 5 cut(s) 480, 727, 1555, 1608, 2381
MspR9I CCNGG 4 cut(s) 481, 727, 908, 1556
MunI CAATTG 3 cut(s) 213, 234, 567
Mva1269I GAATGC 1 cut(s) 152
MvaI CCWGG 1 cut(s) 908
MvnI CGCG 1 cut(s) 2394
MwoI GCNNNNNNNGC 7 cut(s) 1818, 1939, 2119, 2546, 2812, 2888, 2893
NciI CCSGG 3 cut(s) 481, 727, 1556
NcoI CCATGG 2 cut(s) 615, 1026
NdeI CATATG 1 cut(s) 2867
NheI GCTAGC 1 cut(s) 2168
NlaIV GGNNCC 7 cut(s) 48, 2121, 2515, 2544, 2562, 2877, 3164
NmuCI GTSAC 4 cut(s) 652, 751, 1183, 2372
NruI TCGCGA 1 cut(s) 2394
NsiI ATGCAT 1 cut(s) 1545
NspI RCATGY 1 cut(s) 713
OliI CACNNNNGTG 1 cut(s) 1669
PagI TCATGA 2 cut(s) 403, 2364
PciI ACATGT 1 cut(s) 709
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PctI GAATGC 1 cut(s) 152
PfeI GAWTC 6 cut(s) 789, 895, 1073, 1472, 2465, 2902
PflFI GACNNNGTC 1 cut(s) 2337
PfoI TCCNGGA 2 cut(s) 906, 1554
PkrI GCNGC 2 cut(s) 1237, 1564
PleI GAGTC 4 cut(s) 123, 499, 580, 1123
PpsI GAGTC 4 cut(s) 123, 499, 580, 1123
Ppu21I YACGTR 1 cut(s) 1634
PpuMI RGGWCCY 1 cut(s) 2876
PscI ACATGT 1 cut(s) 709
PshBI ATTAAT 1 cut(s) 2753
PsiI TTATAA 1 cut(s) 902
Psp5II RGGWCCY 1 cut(s) 2876
Psp6I CCWGG 1 cut(s) 906
PspFI CCCAGC 1 cut(s) 2355
PspGI CCWGG 1 cut(s) 906
PspN4I GGNNCC 7 cut(s) 48, 2121, 2515, 2544, 2562, 2877, 3164
PspPI GGNCC 2 cut(s) 1080, 2876
PspPPI RGGWCCY 1 cut(s) 2876
PstNI CAGNNNCTG 1 cut(s) 2491
PsuI RGATCY 6 cut(s) 29, 46, 169, 854, 1804, 2542
PsyI GACNNNGTC 1 cut(s) 2337
RruI TCGCGA 1 cut(s) 2394
RsaI GTAC 5 cut(s) 558, 647, 2026, 3101, 3227
RsaNI GTAC 5 cut(s) 557, 646, 2025, 3100, 3226
RseI CAYNNNNRTG 4 cut(s) 714, 1294, 1669, 2459
SatI GCNGC 2 cut(s) 1236, 1563
Sau96I GGNCC 2 cut(s) 1080, 2876
SchI GAGTC 4 cut(s) 123, 499, 581, 1124
ScrFI CCNGG 4 cut(s) 481, 727, 908, 1556
SduI GDGCHC 2 cut(s) 721, 3167
SinI GGWCC 1 cut(s) 2876
SmiI ATTTAAAT 1 cut(s) 1294
SmiMI CAYNNNNRTG 4 cut(s) 714, 1294, 1669, 2459
SmlI CTYRAG 1 cut(s) 1934
SmoI CTYRAG 1 cut(s) 1934
SsiI CCGC 5 cut(s) 858, 2540, 2547, 2885, 3157
SspI AATATT 1 cut(s) 1496
SspMI CTAG 7 cut(s) 780, 861, 1247, 1818, 2169, 2187, 2852
StyD4I CCNGG 4 cut(s) 479, 725, 906, 1554
StyI CCWWGG 3 cut(s) 615, 699, 1026
SwaI ATTTAAAT 1 cut(s) 1294
TaaI ACNGT 8 cut(s) 1189, 1739, 2029, 2085, 2860, 3015, 3052, 3225
TaiI ACGT 4 cut(s) 528, 654, 1636, 1963
TaqI TCGA 8 cut(s) 114, 364, 1113, 1128, 1432, 2148, 2332, 2451
TatI WGTACW 2 cut(s) 645, 3099
TfiI GAWTC 6 cut(s) 789, 895, 1073, 1472, 2465, 2902
TscAI CASTG 5 cut(s) 661, 721, 2441, 2975, 3018
TseFI GTSAC 4 cut(s) 652, 751, 1183, 2372
TseI GCWGC 2 cut(s) 1235, 1562
Tsp45I GTSAC 4 cut(s) 652, 751, 1183, 2372
TspGWI ACGGA 3 cut(s) 1465, 2549, 2783
TspRI CASTG 5 cut(s) 661, 721, 2441, 2975, 3018
Tth111I GACNNNGTC 1 cut(s) 2337
VneI GTGCAC 1 cut(s) 717
VpaK11BI GGWCC 1 cut(s) 2876
VspI ATTAAT 1 cut(s) 2753
XapI RAATTY 9 cut(s) 324, 536, 948, 1954, 2040, 2266, 2584, 2740, 2986
XceI RCATGY 1 cut(s) 713
XcmI CCANNNNNNNNNTGG 2 cut(s) 23, 2932
XmiI GTMKAC 2 cut(s) 669, 1168
XspI CTAG 7 cut(s) 780, 861, 1247, 1818, 2169, 2187, 2852
Zsp2I ATGCAT 1 cut(s) 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.