Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0016101

Physical Location & Seq

Genomic Coordinates Reverse (-)

38218542 .. 38222658

Gene Structure 4117 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g46060.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGATTACAATTCGTGTAGATTTCACTCCCCTTGTATGTCGAGGGTACGCACTGCTGACTTTAGCAACGGAATGGAGGTGATGTCCTTCCTGGTGAGGGGGTGCTACAGCTTGAAACACATCCAGCAAGCTCATGGGCTGATGGTAACCCTAGGCCTTGAGGAGGCTCGATTCATCGAGGCCTGCTCTTCTCTTGGCTTCTCGAGCTACGCCTGCTCCGTCTTCACCCGCAATCCGCAGCCAAACATTAATCTCTACAACACCATGATCAAGGCTCTACCTCCCTCCGATGCCATTTCCGTCTATACCAGTATTCAAGCAGCCGGGTTGCGCCCCGATACCTACTCGGTCCCCTTGGTGCTCAAGGCCGTGGTTCGCCTGGGCGCAGTTGGAATAGGTAGACAGGTGCACTGCCATAGCATCGTCACTGGGTTGGACACCCATGTCAGCGTGGTCACTGCCCTCATTCACATGTACTCCTCTTGTGGCTCCGTTTTCGACGCTCGCAGATTGTTCGACGGAGCTGCCTTCAGGGATGTCGCTCTCTGGAACGCAATGATCGCCGGATATGCGAAACTGGGTCATGTAGATAGTGCCCGCCATGTGTTCGAAACAATGCCCCTTAATAATAGCAATGTCATTTCTTGGACTGCTCTCATTGCCGGATATGCTCAGGTCAACCGTCCCACCGAAGCCATCATGGTCTTCCGGAGAATGCAGCTTCACAATGTTCAGCCTGATGAGATAGCGATGCTGGCCGCGCTCTCTGCTTGTGCCCAGTTAGGTGCCCTCCGTCTCGGGGAGTGGATCCATAACTACATTCAGAAACATGGATTTCGTGAGCTGTCTTCTCTCAACAATGCTCTCATAGACATGTACGCCAAGTCGGGTAACATAAGAAAAGCCCTTCAAGTTTTCCATAGCACCAATCATAAAACTGTGATAACTTGGACGACCATGATAGCTGGACTTGCCCTGCATGGTCTTGGAACACAAGCCCTTGACATGTTTTCTCAAATGGAAAGGGCTCAAATCGCACCCAACCACATTACTTTCATTGCCATCCTTTCTGCTTGTAGCCATGCCCACTTGGTTCAAACGGGCCTTCGCTATTTTGACATCATGGTTTCAAGGTATCGGATTCAACCCAAAATCATGCACTATGGCTGCATGGTTGATCTACTTGGGCGTGCCGGTTATCTTCAAGAGGCACAACAACTTGTTAGGCAGATGCCATTTGAAGCAAATGCGGCTATATGGGGATCTCTTCTTGCTGCTTCAAACATTCATGGAAATGATGAGCTTGGGGAGCATGCTTTACAGAATCTAATAAAGTTAGAGCCCCAGAATAGTGGAAATTATTCACTTTTGTCTAATACATATACTGCTCTGGGTAGGTGGAATGATTCTAGGATGCTAAGGAAAGTGATGAGGGACAATGGTGTGAAGAAGATGCCAGGCAGGAGTTCCATAGAAGTGAATAGCAGAGTTCATGGATTCATTGCAGGAGACAAATCACATTCCGAGAGAGAAAAGATTTATGAAGTCCTTTACAAGCTTCTCTCACAGTCTACGTTGGCTTGCCATCCGCAACAAGACTGTGGGGAGCTGCTTGAATTCGATGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

543

Amino Acids

60.2

Weight (kDa)

8.74

Isoelectric Point (pI)

47.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	212 - 259	7.4e-08	PPR repeat family
PPR_2	PF13041	313 - 360	1.8e-09	PPR repeat family
E_motif	PF20431	430 - 492	3.1e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56310
fragaria_vesca	FvH4_3g46060 FvH4_3g46060 FvH4_3g46060
malus_domestica	MD03G1001200.v1.1
prunus_persica	Prupe.6G000700_v2.0.a1
rosa_laevigata	RLG00000037084
rosa_multiflora	Rmu_co8446957.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000530
rosa_rugosa	Rorug05G0489400
rosa_samantha	Rh5AG541900 Rh5BG567500 Rh5CG589300 Rh5DG575700
rosa_wichuraiana	Rw5G050410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	443
AccB1I	GGYRCC	1 cut(s)	785
AccI	GTMKAC	2 cut(s)	400, 1571
AccII	CGCG	1 cut(s)	761
AccIII	TCCGGA	1 cut(s)	708
AciI	CCGC	6 cut(s)	229, 236, 598, 759, 1250, 1589
AclWI	GGATC	3 cut(s)	802, 815, 1270
AcoI	YGGCCR	1 cut(s)	756
AcsI	RAATTY	1 cut(s)	1616
AcuI	CTGAAG	1 cut(s)	514
AfaI	GTAC	3 cut(s)	48, 476, 878
AfiI	CCNNNNNNNGG	3 cut(s)	97, 163, 799
AflIII	ACRYGT	3 cut(s)	471, 873, 1005
AjnI	CCWGG	3 cut(s)	90, 378, 1456
Alw21I	GWGCWC	2 cut(s)	363, 411
Alw26I	GTCTC	2 cut(s)	800, 1503
Alw44I	GTGCAC	1 cut(s)	407
AlwI	GGATC	3 cut(s)	802, 815, 1270
Ama87I	CYCGRG	2 cut(s)	202, 797
Aor13HI	TCCGGA	1 cut(s)	708
AoxI	GGCC	5 cut(s)	154, 180, 366, 756, 1102
ApaLI	GTGCAC	1 cut(s)	407
ApeKI	GCWGC	7 cut(s)	238, 320, 524, 718, 1167, 1274, 1609
ApoI	RAATTY	1 cut(s)	1616
AseI	ATTAAT	1 cut(s)	249
Asp700I	GAANNNNTTC	1 cut(s)	1360
AspA2I	CCTAGG	1 cut(s)	151
AspLEI	GCGC	3 cut(s)	333, 386, 763
AspS9I	GGNCC	2 cut(s)	349, 1102
AsuC2I	CCSGG	1 cut(s)	325
AsuHPI	GGTGA	3 cut(s)	91, 106, 217
AsuII	TTCGAA	1 cut(s)	609
AvaI	CYCGRG	2 cut(s)	202, 797
AvaII	GGWCC	1 cut(s)	349
AvrII	CCTAGG	1 cut(s)	151
BaeGI	GKGCMC	4 cut(s)	411, 598, 778, 790
BamHI	GGATCC	1 cut(s)	807
BanI	GGYRCC	1 cut(s)	785
BanII	GRGCYC	2 cut(s)	1030, 1344
BbsI	GAAGAC	3 cut(s)	214, 697, 840
Bbv12I	GWGCWC	2 cut(s)	363, 411
BbvI	GCAGC	7 cut(s)	250, 332, 511, 730, 1154, 1261, 1596
BccI	CCATC	4 cut(s)	136, 704, 1070, 1593
BceAI	ACGGC	1 cut(s)	353
BcgI	CGANNNNNNTGC	4 cut(s)	496, 506, 530, 540
BciT130I	CCWGG	3 cut(s)	92, 380, 1458
BclI	TGATCA	1 cut(s)	267
BcnI	CCSGG	1 cut(s)	325
BcoDI	GTCTC	2 cut(s)	800, 1503
BfaI	CTAG	2 cut(s)	152, 1410
BfmI	CTRYAG	1 cut(s)	106
BisI	GCNGC	9 cut(s)	239, 321, 525, 719, 759, 1168, 1251, 1275, 1610
BlnI	CCTAGG	1 cut(s)	151
BlsI	GCNGC	9 cut(s)	240, 322, 526, 720, 760, 1169, 1252, 1276, 1611
Bme1390I	CCNGG	4 cut(s)	92, 325, 380, 1458
Bme18I	GGWCC	1 cut(s)	349
BmeT110I	CYCGRG	2 cut(s)	202, 797
BmgT120I	GGNCC	2 cut(s)	349, 1102
BmiI	GGNNCC	4 cut(s)	351, 490, 787, 809
BmrFI	CCNGG	4 cut(s)	92, 325, 380, 1458
BmrI	ACTGGG	3 cut(s)	438, 587, 772
BmsI	GCATC	7 cut(s)	280, 429, 741, 1221, 1404, 1443, 1612
BmuI	ACTGGG	3 cut(s)	438, 587, 772
BpiI	GAAGAC	3 cut(s)	214, 697, 840
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
Bpu10I	CCTNAGC	2 cut(s)	672, 1418
Bpu14I	TTCGAA	1 cut(s)	609
BpuEI	CTTGAG	2 cut(s)	179, 347
BpuMI	CCSGG	1 cut(s)	325
BsaJI	CCNNGG	4 cut(s)	151, 354, 369, 379
BsaWI	WCCGGW	1 cut(s)	708
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 98, 200, 230, 461, 491
Bsc4I	CCNNNNNNNGG	3 cut(s)	97, 163, 799
Bse118I	RCCGGY	1 cut(s)	1193
Bse1I	ACTGG	4 cut(s)	309, 433, 582, 778
Bse3DI	GCAATG	5 cut(s)	561, 640, 657, 1056, 1500
BseAI	TCCGGA	1 cut(s)	708
BseBI	CCWGG	3 cut(s)	92, 380, 1458
BseDI	CCNNGG	4 cut(s)	151, 354, 369, 379
BseGI	GGATG	5 cut(s)	120, 541, 1062, 1419, 1585
BseLI	CCNNNNNNNGG	3 cut(s)	97, 163, 799
BseMI	GCAATG	5 cut(s)	561, 640, 657, 1056, 1500
BseMII	CTCAG	1 cut(s)	686
BseNI	ACTGG	4 cut(s)	309, 433, 582, 778
BseRI	GAGGAG	2 cut(s)	176, 469
BseSI	GKGCMC	4 cut(s)	411, 598, 778, 790
BseXI	GCAGC	7 cut(s)	250, 332, 511, 730, 1154, 1261, 1596
Bsh1236I	CGCG	1 cut(s)	761
BshFI	GGCC	5 cut(s)	156, 182, 368, 758, 1104
BshNI	GGYRCC	1 cut(s)	785
BsiHKAI	GWGCWC	2 cut(s)	363, 411
BsiHKCI	CYCGRG	2 cut(s)	202, 797
BsiSI	CCGG	5 cut(s)	324, 564, 663, 709, 1194
BslFI	GGGAC	3 cut(s)	335, 669, 1448
BslI	CCNNNNNNNGG	3 cut(s)	97, 163, 799
BsmAI	GTCTC	2 cut(s)	800, 1503
BsmBI	CGTCTC	1 cut(s)	800
BsmFI	GGGAC	3 cut(s)	335, 669, 1448
BsmI	GAATGC	1 cut(s)	720
BsnI	GGCC	5 cut(s)	156, 182, 368, 758, 1104
BsoBI	CYCGRG	2 cut(s)	202, 797
Bsp119I	TTCGAA	1 cut(s)	609
Bsp1286I	GDGCHC	7 cut(s)	363, 411, 598, 778, 790, 1030, 1344
Bsp13I	TCCGGA	1 cut(s)	708
Bsp143I	GATC	5 cut(s)	267, 558, 807, 1177, 1262
BspACI	CCGC	6 cut(s)	229, 236, 598, 759, 1250, 1589
BspANI	GGCC	5 cut(s)	156, 182, 368, 758, 1104
BspCNI	CTCAG	1 cut(s)	685
BspEI	TCCGGA	1 cut(s)	708
BspFNI	CGCG	1 cut(s)	761
BspLI	GGNNCC	4 cut(s)	351, 490, 787, 809
BspPI	GGATC	3 cut(s)	802, 815, 1270
BspQI	GCTCTTC	1 cut(s)	193
BspT104I	TTCGAA	1 cut(s)	609
BspT107I	GGYRCC	1 cut(s)	785
BsrDI	GCAATG	5 cut(s)	561, 640, 657, 1056, 1500
BsrFI	RCCGGY	1 cut(s)	1193
BsrI	ACTGG	4 cut(s)	309, 433, 582, 778
BssAI	RCCGGY	1 cut(s)	1193
BssECI	CCNNGG	4 cut(s)	151, 354, 369, 379
BssMI	GATC	5 cut(s)	267, 558, 807, 1177, 1262
BssT1I	CCWWGG	2 cut(s)	151, 354
Bst2UI	CCWGG	3 cut(s)	92, 380, 1458
Bst4CI	ACNGT	4 cut(s)	683, 940, 1569, 1601
Bst6I	CTCTTC	2 cut(s)	193, 1272
BstBI	TTCGAA	1 cut(s)	609
BstC8I	GCNNGC	9 cut(s)	129, 184, 214, 505, 598, 756, 1191, 1314, 1582
BstDEI	CTNAG	2 cut(s)	672, 1418
BstDSI	CCRYGG	1 cut(s)	369
BstEII	GGTNACC	1 cut(s)	145
BstENI	CCTNNNNNAGG	1 cut(s)	161
BstF5I	GGATG	5 cut(s)	120, 541, 1062, 1419, 1585
BstFNI	CGCG	1 cut(s)	761
BstHHI	GCGC	3 cut(s)	333, 386, 763
BstKTI	GATC	5 cut(s)	270, 561, 810, 1180, 1265
BstMAI	GTCTC	2 cut(s)	800, 1503
BstMBI	GATC	5 cut(s)	267, 558, 807, 1177, 1262
BstNI	CCWGG	3 cut(s)	92, 380, 1458
BstNSI	RCATGY	4 cut(s)	475, 877, 1009, 1316
BstPI	GGTNACC	1 cut(s)	145
BstSCI	CCNGG	4 cut(s)	90, 323, 378, 1456
BstSFI	CTRYAG	1 cut(s)	106
BstSLI	GKGCMC	4 cut(s)	411, 598, 778, 790
BstUI	CGCG	1 cut(s)	761
BstV1I	GCAGC	7 cut(s)	250, 332, 511, 730, 1154, 1261, 1596
BstV2I	GAAGAC	3 cut(s)	214, 697, 840
BstX2I	RGATCY	2 cut(s)	807, 1262
BstXI	CCANNNNNNTGG	1 cut(s)	1352
BstYI	RGATCY	2 cut(s)	807, 1262
BsuRI	GGCC	5 cut(s)	156, 182, 368, 758, 1104
BtgI	CCRYGG	1 cut(s)	369
BtgZI	GCGATG	1 cut(s)	764
BtsCI	GGATG	5 cut(s)	120, 541, 1062, 1419, 1585
BtsI	GCAGTG	3 cut(s)	51, 409, 456
BtsIMutI	CAGTG	4 cut(s)	51, 409, 426, 456
Cac8I	GCNNGC	9 cut(s)	129, 184, 214, 505, 598, 756, 1191, 1314, 1582
CfoI	GCGC	3 cut(s)	333, 386, 763
Cfr10I	RCCGGY	1 cut(s)	1193
Cfr13I	GGNCC	2 cut(s)	349, 1102
CseI	GACGC	1 cut(s)	509
Csp6I	GTAC	3 cut(s)	47, 475, 877
CviQI	GTAC	3 cut(s)	47, 475, 877
DdeI	CTNAG	2 cut(s)	672, 1418
DpnI	GATC	5 cut(s)	269, 560, 809, 1179, 1264
DpnII	GATC	5 cut(s)	267, 558, 807, 1177, 1262
DrdI	GACNNNNNNGTC	1 cut(s)	443
DseDI	GACNNNNNNGTC	1 cut(s)	443
EaeI	YGGCCR	1 cut(s)	756
Eam1104I	CTCTTC	2 cut(s)	193, 1272
EarI	CTCTTC	2 cut(s)	193, 1272
Eco130I	CCWWGG	2 cut(s)	151, 354
Eco147I	AGGCCT	2 cut(s)	156, 182
Eco24I	GRGCYC	2 cut(s)	1030, 1344
Eco47I	GGWCC	1 cut(s)	349
Eco57I	CTGAAG	1 cut(s)	514
Eco88I	CYCGRG	2 cut(s)	202, 797
Eco91I	GGTNACC	1 cut(s)	145
EcoNI	CCTNNNNNAGG	1 cut(s)	161
EcoO65I	GGTNACC	1 cut(s)	145
EcoRI	GAATTC	1 cut(s)	1616
EcoRII	CCWGG	3 cut(s)	90, 378, 1456
EcoT14I	CCWWGG	2 cut(s)	151, 354
EcoT22I	ATGCAT	1 cut(s)	1627
EcoT38I	GRGCYC	2 cut(s)	1030, 1344
ErhI	CCWWGG	2 cut(s)	151, 354
Esp3I	CGTCTC	1 cut(s)	800
FaqI	GGGAC	3 cut(s)	335, 669, 1448
FauI	CCCGC	2 cut(s)	236, 605
FbaI	TGATCA	1 cut(s)	267
FblI	GTMKAC	2 cut(s)	400, 1571
Fnu4HI	GCNGC	9 cut(s)	239, 321, 525, 719, 759, 1168, 1251, 1275, 1610
FokI	GGATG	5 cut(s)	107, 548, 1049, 1426, 1572
FriOI	GRGCYC	2 cut(s)	1030, 1344
Fsp4HI	GCNGC	9 cut(s)	239, 321, 525, 719, 759, 1168, 1251, 1275, 1610
FspBI	CTAG	2 cut(s)	152, 1410
GlaI	GCGC	3 cut(s)	332, 385, 762
GluI	GCNGC	9 cut(s)	239, 321, 525, 719, 759, 1168, 1251, 1275, 1610
HaeIII	GGCC	5 cut(s)	156, 182, 368, 758, 1104
HapII	CCGG	5 cut(s)	324, 564, 663, 709, 1194
HgaI	GACGC	1 cut(s)	509
HhaI	GCGC	3 cut(s)	333, 386, 763
Hin6I	GCGC	3 cut(s)	331, 384, 761
HinP1I	GCGC	3 cut(s)	331, 384, 761
HincII	GTYRAC	1 cut(s)	679
HindII	GTYRAC	1 cut(s)	679
HindIII	AAGCTT	1 cut(s)	1556
HinfI	GANTC	5 cut(s)	171, 1141, 1324, 1406, 1497
HpaII	CCGG	5 cut(s)	324, 564, 663, 709, 1194
HphI	GGTGA	3 cut(s)	91, 106, 217
Hpy166II	GTNNAC	4 cut(s)	401, 409, 679, 1572
Hpy188I	TCNGA	4 cut(s)	289, 825, 1140, 1525
Hpy188III	TCNNGA	5 cut(s)	202, 547, 709, 839, 1205
Hpy8I	GTNNAC	4 cut(s)	401, 409, 679, 1572
Hpy99I	CGWCG	2 cut(s)	503, 521
HpyAV	CCTTC	4 cut(s)	97, 538, 917, 1115
HpyCH4III	ACNGT	4 cut(s)	683, 940, 1569, 1601
HpyCH4IV	ACGT	1 cut(s)	1574
HpyCH4V	TGCA	7 cut(s)	409, 718, 979, 1159, 1170, 1505, 1625
HpyF3I	CTNAG	2 cut(s)	672, 1418
HpySE526I	ACGT	1 cut(s)	1574
HspAI	GCGC	3 cut(s)	331, 384, 761
Kpn2I	TCCGGA	1 cut(s)	708
Ksp22I	TGATCA	1 cut(s)	267
Kzo9I	GATC	5 cut(s)	267, 558, 807, 1177, 1262
LguI	GCTCTTC	1 cut(s)	193
LmnI	GCTCC	5 cut(s)	221, 494, 521, 1309, 1606
Lsp1109I	GCAGC	7 cut(s)	250, 332, 511, 730, 1154, 1261, 1596
LweI	GCATC	7 cut(s)	280, 429, 741, 1221, 1404, 1443, 1612
MaeI	CTAG	2 cut(s)	152, 1410
MaeII	ACGT	1 cut(s)	1574
MaeIII	GTNAC	4 cut(s)	145, 424, 454, 890
MalI	GATC	5 cut(s)	269, 560, 809, 1179, 1264
MboI	GATC	5 cut(s)	267, 558, 807, 1177, 1262
MboII	GAAGA	8 cut(s)	180, 214, 697, 840, 1193, 1259, 1459, 1462
MflI	RGATCY	2 cut(s)	807, 1262
MhlI	GDGCHC	7 cut(s)	363, 411, 598, 778, 790, 1030, 1344
MluCI	AATT	3 cut(s)	10, 1357, 1616
MmeI	TCCRAC	2 cut(s)	370, 414
Mph1103I	ATGCAT	1 cut(s)	1627
MroI	TCCGGA	1 cut(s)	708
MroXI	GAANNNNTTC	1 cut(s)	1360
MseI	TTAA	2 cut(s)	249, 624
MslI	CAYNNNNRTG	4 cut(s)	470, 872, 1293, 1475
MspI	CCGG	5 cut(s)	324, 564, 663, 709, 1194
MspR9I	CCNGG	4 cut(s)	92, 325, 380, 1458
Mva1269I	GAATGC	1 cut(s)	720
MvaI	CCWGG	3 cut(s)	92, 380, 1458
MvnI	CGCG	1 cut(s)	761
NciI	CCSGG	1 cut(s)	325
NdeII	GATC	5 cut(s)	267, 558, 807, 1177, 1262
NlaIV	GGNNCC	4 cut(s)	351, 490, 787, 809
NmuCI	GTSAC	2 cut(s)	424, 454
NsiI	ATGCAT	1 cut(s)	1627
NspI	RCATGY	4 cut(s)	475, 877, 1009, 1316
NspV	TTCGAA	1 cut(s)	609
PaeI	GCATGC	1 cut(s)	1316
PaeR7I	CTCGAG	1 cut(s)	202
PceI	AGGCCT	2 cut(s)	156, 182
PciI	ACATGT	3 cut(s)	471, 873, 1005
PciSI	GCTCTTC	1 cut(s)	193
PcsI	WCGNNNNNNNCGW	1 cut(s)	216
PctI	GAATGC	1 cut(s)	720
PdmI	GAANNNNTTC	1 cut(s)	1360
PfeI	GAWTC	5 cut(s)	171, 1141, 1324, 1406, 1497
PkrI	GCNGC	9 cut(s)	240, 322, 526, 720, 760, 1169, 1252, 1276, 1611
PscI	ACATGT	3 cut(s)	471, 873, 1005
PshBI	ATTAAT	1 cut(s)	249
Psp6I	CCWGG	3 cut(s)	90, 378, 1456
PspEI	GGTNACC	1 cut(s)	145
PspGI	CCWGG	3 cut(s)	90, 378, 1456
PspN4I	GGNNCC	4 cut(s)	351, 490, 787, 809
PspPI	GGNCC	2 cut(s)	349, 1102
PsuI	RGATCY	2 cut(s)	807, 1262
RsaI	GTAC	3 cut(s)	48, 476, 878
RsaNI	GTAC	3 cut(s)	47, 475, 877
RseI	CAYNNNNRTG	4 cut(s)	470, 872, 1293, 1475
SapI	GCTCTTC	1 cut(s)	193
SaqAI	TTAA	2 cut(s)	249, 624
SatI	GCNGC	9 cut(s)	239, 321, 525, 719, 759, 1168, 1251, 1275, 1610
Sau3AI	GATC	5 cut(s)	267, 558, 807, 1177, 1262
Sau96I	GGNCC	2 cut(s)	349, 1102
ScrFI	CCNGG	4 cut(s)	92, 325, 380, 1458
SduI	GDGCHC	7 cut(s)	363, 411, 598, 778, 790, 1030, 1344
SfaNI	GCATC	7 cut(s)	280, 429, 741, 1221, 1404, 1443, 1612
SfcI	CTRYAG	1 cut(s)	106
Sfr274I	CTCGAG	1 cut(s)	202
SfuI	TTCGAA	1 cut(s)	609
SinI	GGWCC	1 cut(s)	349
SlaI	CTCGAG	1 cut(s)	202
SmiMI	CAYNNNNRTG	4 cut(s)	470, 872, 1293, 1475
SmlI	CTYRAG	3 cut(s)	158, 202, 362
SmoI	CTYRAG	3 cut(s)	158, 202, 362
SphI	GCATGC	1 cut(s)	1316
Sse9I	AATT	3 cut(s)	10, 1357, 1616
SseBI	AGGCCT	2 cut(s)	156, 182
SsiI	CCGC	6 cut(s)	229, 236, 598, 759, 1250, 1589
SspMI	CTAG	2 cut(s)	152, 1410
StuI	AGGCCT	2 cut(s)	156, 182
StyD4I	CCNGG	4 cut(s)	90, 323, 378, 1456
StyI	CCWWGG	2 cut(s)	151, 354
TaaI	ACNGT	4 cut(s)	683, 940, 1569, 1601
TaiI	ACGT	1 cut(s)	1577
TaqI	TCGA	8 cut(s)	41, 169, 177, 203, 498, 516, 609, 1620
TaqII	GACCGA	1 cut(s)	337
TasI	AATT	3 cut(s)	10, 1357, 1616
TatI	WGTACW	1 cut(s)	474
TauI	GCSGC	2 cut(s)	761, 1253
TfiI	GAWTC	5 cut(s)	171, 1141, 1324, 1406, 1497
Tru1I	TTAA	2 cut(s)	249, 624
Tru9I	TTAA	2 cut(s)	249, 624
TscAI	CASTG	4 cut(s)	58, 416, 433, 463
TseFI	GTSAC	2 cut(s)	424, 454
TseI	GCWGC	7 cut(s)	238, 320, 524, 718, 1167, 1274, 1609
Tsp45I	GTSAC	2 cut(s)	424, 454
TspDTI	ATGAA	6 cut(s)	163, 1045, 1277, 1481, 1489, 1557
TspGWI	ACGGA	6 cut(s)	84, 208, 289, 481, 534, 782
TspRI	CASTG	4 cut(s)	58, 416, 433, 463
VneI	GTGCAC	1 cut(s)	407
VpaK11BI	GGWCC	1 cut(s)	349
VspI	ATTAAT	1 cut(s)	249
XagI	CCTNNNNNAGG	1 cut(s)	161
XapI	RAATTY	1 cut(s)	1616
XceI	RCATGY	4 cut(s)	475, 877, 1009, 1316
XcmI	CCANNNNNNNNNTGG	1 cut(s)	131
XhoI	CTCGAG	1 cut(s)	202
XmaJI	CCTAGG	1 cut(s)	151
XmiI	GTMKAC	2 cut(s)	400, 1571
XmnI	GAANNNNTTC	1 cut(s)	1360
XspI	CTAG	2 cut(s)	152, 1410
Zsp2I	ATGCAT	1 cut(s)	1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.