Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0016101

Physical Location & Seq

Genomic Coordinates Forward (+)

80668 .. 82309

Gene Structure 1642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1001200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGAGGAGAGGATTACAGCTCCAGTTTGATCGAGTTTCTTGGTTGCTGAGACAGTGCTCCACCCCCAAACACATCCAGCAAGCTCATGGATTTATGGTCCCCCGAAGCCTTGTTCACGAAAATTTTATCCTCGCCCGATTCATCGACACCTGCTCTTCTCTCGGCCTCTCAGATTACGCCTCTTCCGTCTTCGCCCACTGCCCAGCCACTCATCAGCCAACTATTTATCTCTACAACACCATGATCAAGGCTCACGCTCTCTCCCCCTCCCCCTCCCGCGCCGTCTCTCTTTTCAACTCCATTCAACTCGCCGCCTTGCGCCCTGACTCCTACTCCTTCTCCTTTGTGCTCAAGGCCGTTGTCCGCTTGCTCCAACTTCAACTGGGCGCTCAGATTCACTGCCACGCCATTGCCACTGGGTTCGCCGCCGATGCCAACGTCCTCACTGCCCTCGTTCATATGTATTCCTCCTGCGGATGCGTTTCCCACGCCCGCGCGCTGTTTGATGGAGCTTTCTTTGTCAGGGATGCCGCACTCTGGAACGCAATGATCGGGGGGTATGCCAAGCTCGGTGACCTCGACAGTGCCCGCCATGTGTTTGAACTTATGCCCCATAGCATTCGGAACGTGATTTCTTGGACTGCCCTGATTGCCGGATACGCCCAGACGAACCGCCCCCACGAGGCCATCACCGTCTTCCAGAGAATGCAGGTTGAGAATGTTGAGCCTGATGAGATAGCAGTGTTAGCCGCACTCTCTGCGTGTGCCCATTTAGGTGCCCTTCACTTGGGGGAGTGGATCCATAACTACATTGACAGGCATGGATTTCGTAAGCTGGTTTCTCTTAACAATGCACTTATCGACATGTATGCAAAGTCAGGCAACATCATGAAAGCCCTTCGGGTTTTTGAAAATACCAAGTGCAAAACTGTCGTAACTTGGACGACCATGATTGCTGGACTGGCTCTGCATGGTCTTGCAAGAGAAGCCCTTCAAATGTTTTCTCAAATGGAAAGGGCTCAAATCAAGCCTAACCATATCACTTTCATCGCCATCCTTTCTGCTTGTAGCCATGGTCGATTGGTTGAACTAGGCCATTGGTATTTTAACATCATGATCTCCAAGTATGGGATTGAACCCAAGATCGTTCACTATGGCTGCATGATCGATTTACTTGGGCGCGCCGGTTATCTTGAAGAGGCACATGAGCTGGTTAAGCAGATGCCTTTTGAAGCAAATCCAGCTATATGGGGTTCTCTTCTTGCGGCTTCTAATATACATGGGCATGCTGAGCTTGGGCAGCATGCTTTACAACATCTTATAATGCTCGAGCCCCATAACAGTGGAAACTATGCACTTTTGTCTAACATATATGGTGCTCTAGGTAGGTGGAATGATTCTGGGATGCTAAGAAAAATTATGAGGGACACAGGTGTGAAGAAGGCGCCGGGAGGGAGTTCAGTAGAAGTGAATAACAGAGTCCATGAATTCATGGCAGGAGACAAATCACATTCAGAGTGCACTAGGATATATGGAGTCCTGTTTAAGATTTTCAGGCAGTTGAAGCCGGCTGGACATCTACAAAATGATTGTGAGGAGCTGCTTGAATTTGATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

540

Amino Acids

60.03

Weight (kDa)

8.38

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	208 - 256	3.1e-08	PPR repeat family
PPR	PF01535	211 - 240	5.2e-06	PPR repeat
PPR_2	PF13041	310 - 357	4.7e-11	PPR repeat family
PPR_3	PF13812	311 - 356	3.4e-06	Pentatricopeptide repeat domain
PPR	PF01535	312 - 340	1.3e-06	PPR repeat
E_motif	PF20431	427 - 489	7.1e-19	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56310
fragaria_vesca	FvH4_3g46060 FvH4_3g46060 FvH4_3g46060
malus_domestica	MD03G1001200.v1.1
prunus_persica	Prupe.6G000700_v2.0.a1
rosa_laevigata	RLG00000037084
rosa_multiflora	Rmu_co8446957.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000530
rosa_rugosa	Rorug05G0489400
rosa_samantha	Rh5AG541900 Rh5BG567500 Rh5CG589300 Rh5DG575700
rosa_wichuraiana	Rw5G050410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1322
AarI	CACCTGC	1 cut(s)	158
Acc36I	ACCTGC	2 cut(s)	158, 700
AccB1I	GGYRCC	2 cut(s)	776, 1444
AccII	CGCG	4 cut(s)	279, 495, 497, 1182
AclWI	GGATC	2 cut(s)	793, 806
AcsI	RAATTY	3 cut(s)	121, 1487, 1607
AcyI	GRCGYC	1 cut(s)	1445
AfiI	CCNNNNNNNGG	4 cut(s)	537, 682, 787, 1128
AflIII	ACRYGT	1 cut(s)	864
AleI	CACNNNNGTG	1 cut(s)	1433
AluBI	AGCT	9 cut(s)	19, 83, 512, 568, 835, 1210, 1244, 1294, 1600
AluI	AGCT	9 cut(s)	19, 83, 512, 568, 835, 1210, 1244, 1294, 1600
Alw21I	GWGCWC	4 cut(s)	59, 351, 1381, 1523
Alw26I	GTCTC	3 cut(s)	43, 289, 1494
Alw44I	GTGCAC	1 cut(s)	1519
AlwI	GGATC	2 cut(s)	793, 806
Ama87I	CYCGRG	1 cut(s)	1328
AoxI	GGCC	4 cut(s)	163, 354, 684, 1093
ApaLI	GTGCAC	1 cut(s)	1519
ApeKI	GCWGC	3 cut(s)	1158, 1300, 1600
ApoI	RAATTY	3 cut(s)	121, 1487, 1607
AscI	GGCGCGCC	1 cut(s)	1180
Asp700I	GAANNNNTTC	1 cut(s)	990
AspLEI	GCGC	8 cut(s)	281, 321, 389, 497, 499, 1182, 1184, 1447
AspS9I	GGNCC	1 cut(s)	97
AsuC2I	CCSGG	1 cut(s)	1449
AsuHPI	GGTGA	2 cut(s)	584, 682
AvaI	CYCGRG	1 cut(s)	1328
AvaII	GGWCC	1 cut(s)	97
BaeGI	GKGCMC	4 cut(s)	589, 769, 781, 1523
BamHI	GGATCC	1 cut(s)	798
BanI	GGYRCC	2 cut(s)	776, 1444
BanII	GRGCYC	2 cut(s)	1021, 1335
BauI	CACGAG	1 cut(s)	680
BbsI	GAAGAC	2 cut(s)	181, 688
Bbv12I	GWGCWC	4 cut(s)	59, 351, 1381, 1523
BbvI	GCAGC	3 cut(s)	1145, 1312, 1587
BccI	CCATC	3 cut(s)	500, 695, 1061
BceAI	ACGGC	2 cut(s)	266, 341
BcgI	CGANNNNNNTGC	6 cut(s)	809, 843, 851, 885, 913, 947
BciVI	GTATCC	1 cut(s)	650
BclI	TGATCA	1 cut(s)	243
BcnI	CCSGG	1 cut(s)	1449
BcoDI	GTCTC	3 cut(s)	43, 289, 1494
BfaI	CTAG	3 cut(s)	1091, 1382, 1524
BfoI	RGCGCY	2 cut(s)	390, 1448
BfuAI	ACCTGC	2 cut(s)	158, 700
BfuI	GTATCC	1 cut(s)	650
BisI	GCNGC	8 cut(s)	312, 426, 531, 750, 1159, 1266, 1301, 1601
BlpI	GCTNAGC	1 cut(s)	1290
BlsI	GCNGC	8 cut(s)	313, 427, 532, 751, 1160, 1267, 1302, 1602
Bme1390I	CCNGG	1 cut(s)	1449
Bme18I	GGWCC	1 cut(s)	97
BmeT110I	CYCGRG	1 cut(s)	1328
BmgT120I	GGNCC	1 cut(s)	97
BmiI	GGNNCC	4 cut(s)	99, 778, 800, 1446
BmrFI	CCNGG	1 cut(s)	1449
BmrI	ACTGGG	2 cut(s)	392, 426
BmsI	GCATC	5 cut(s)	421, 467, 517, 1212, 1395
BmuI	ACTGGG	2 cut(s)	392, 426
BpiI	GAAGAC	2 cut(s)	181, 688
BpmI	CTGGAG	1 cut(s)	5
Bpu1102I	GCTNAGC	1 cut(s)	1290
BpuEI	CTTGAG	1 cut(s)	335
BpuMI	CCSGG	1 cut(s)	1449
Bsa29I	ATCGAT	1 cut(s)	1167
BsaHI	GRCGYC	1 cut(s)	1445
BsaJI	CCNNGG	1 cut(s)	1072
BsaXI	ACNNNNNCTCC	6 cut(s)	245, 275, 317, 323, 347, 353
Bsc4I	CCNNNNNNNGG	4 cut(s)	537, 682, 787, 1128
Bse118I	RCCGGY	2 cut(s)	1184, 1567
Bse1I	ACTGG	4 cut(s)	22, 387, 421, 966
Bse3DI	GCAATG	2 cut(s)	408, 552
BseCI	ATCGAT	1 cut(s)	1167
BseDI	CCNNGG	1 cut(s)	1072
BseGI	GGATG	5 cut(s)	72, 482, 532, 1053, 1410
BseLI	CCNNNNNNNGG	4 cut(s)	537, 682, 787, 1128
BseMI	GCAATG	2 cut(s)	408, 552
BseMII	CTCAG	4 cut(s)	38, 183, 404, 1281
BseNI	ACTGG	4 cut(s)	22, 387, 421, 966
BsePI	GCGCGC	2 cut(s)	495, 1180
BseRI	GAGGAG	2 cut(s)	19, 1610
BseSI	GKGCMC	4 cut(s)	589, 769, 781, 1523
BseXI	GCAGC	3 cut(s)	1145, 1312, 1587
BseYI	CCCAGC	1 cut(s)	202
Bsh1236I	CGCG	4 cut(s)	279, 495, 497, 1182
BshFI	GGCC	4 cut(s)	165, 356, 686, 1095
BshNI	GGYRCC	2 cut(s)	776, 1444
BshVI	ATCGAT	1 cut(s)	1167
BsiHKAI	GWGCWC	4 cut(s)	59, 351, 1381, 1523
BsiHKCI	CYCGRG	1 cut(s)	1328
BsiSI	CCGG	4 cut(s)	654, 1185, 1448, 1568
BslFI	GGGAC	2 cut(s)	83, 1439
BslI	CCNNNNNNNGG	4 cut(s)	537, 682, 787, 1128
BsmAI	GTCTC	3 cut(s)	43, 289, 1494
BsmBI	CGTCTC	1 cut(s)	289
BsmFI	GGGAC	2 cut(s)	83, 1439
BsmI	GAATGC	2 cut(s)	618, 711
BsnI	GGCC	4 cut(s)	165, 356, 686, 1095
BsoBI	CYCGRG	1 cut(s)	1328
Bsp1286I	GDGCHC	9 cut(s)	59, 351, 589, 769, 781, 1021, 1335, 1381, 1523
Bsp143I	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
Bsp1720I	GCTNAGC	1 cut(s)	1290
Bsp19I	CCATGG	1 cut(s)	1072
BspANI	GGCC	4 cut(s)	165, 356, 686, 1095
BspCNI	CTCAG	4 cut(s)	39, 182, 403, 1282
BspDI	ATCGAT	1 cut(s)	1167
BspFNI	CGCG	4 cut(s)	279, 495, 497, 1182
BspHI	TCATGA	2 cut(s)	888, 1113
BspLI	GGNNCC	4 cut(s)	99, 778, 800, 1446
BspMI	ACCTGC	2 cut(s)	158, 700
BspPI	GGATC	2 cut(s)	793, 806
BspQI	GCTCTTC	1 cut(s)	160
BspT107I	GGYRCC	2 cut(s)	776, 1444
BsrDI	GCAATG	2 cut(s)	408, 552
BsrFI	RCCGGY	2 cut(s)	1184, 1567
BsrI	ACTGG	4 cut(s)	22, 387, 421, 966
BssAI	RCCGGY	2 cut(s)	1184, 1567
BssECI	CCNNGG	1 cut(s)	1072
BssHII	GCGCGC	2 cut(s)	495, 1180
BssMI	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
BssNI	GRCGYC	1 cut(s)	1445
BssSI	CACGAG	1 cut(s)	680
BssT1I	CCWWGG	1 cut(s)	1072
Bst2BI	CACGAG	1 cut(s)	680
Bst4CI	ACNGT	5 cut(s)	54, 584, 694, 931, 1343
Bst6I	CTCTTC	4 cut(s)	160, 187, 1191, 1263
BstACI	GRCGYC	1 cut(s)	1445
BstAPI	GCANNNNNTGC	1 cut(s)	758
BstC8I	GCNNGC	9 cut(s)	81, 368, 493, 497, 589, 1182, 1287, 1305, 1569
BstDEI	CTNAG	5 cut(s)	47, 169, 390, 1290, 1409
BstDSI	CCRYGG	1 cut(s)	1072
BstEII	GGTNACC	1 cut(s)	572
BstF5I	GGATG	5 cut(s)	72, 482, 532, 1053, 1410
BstFNI	CGCG	4 cut(s)	279, 495, 497, 1182
BstH2I	RGCGCY	2 cut(s)	390, 1448
BstHHI	GCGC	8 cut(s)	281, 321, 389, 497, 499, 1182, 1184, 1447
BstKTI	GATC	7 cut(s)	31, 246, 552, 801, 1119, 1146, 1167
BstMAI	GTCTC	3 cut(s)	43, 289, 1494
BstMBI	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
BstNSI	RCATGY	3 cut(s)	868, 1289, 1307
BstPI	GGTNACC	1 cut(s)	572
BstSCI	CCNGG	1 cut(s)	1447
BstSLI	GKGCMC	4 cut(s)	589, 769, 781, 1523
BstUI	CGCG	4 cut(s)	279, 495, 497, 1182
BstV1I	GCAGC	3 cut(s)	1145, 1312, 1587
BstV2I	GAAGAC	2 cut(s)	181, 688
BstX2I	RGATCY	1 cut(s)	798
BstXI	CCANNNNNNTGG	2 cut(s)	1248, 1343
BstYI	RGATCY	1 cut(s)	798
Bsu15I	ATCGAT	1 cut(s)	1167
BsuI	GTATCC	1 cut(s)	650
BsuRI	GGCC	4 cut(s)	165, 356, 686, 1095
BsuTUI	ATCGAT	1 cut(s)	1167
BtgI	CCRYGG	1 cut(s)	1072
BtgZI	GCGATG	1 cut(s)	1033
BtsCI	GGATG	5 cut(s)	72, 482, 532, 1053, 1410
BtsI	GCAGTG	4 cut(s)	196, 397, 444, 747
BtsIMutI	CAGTG	8 cut(s)	59, 196, 397, 414, 444, 589, 747, 1348
BveI	ACCTGC	2 cut(s)	158, 700
Cac8I	GCNNGC	9 cut(s)	81, 368, 493, 497, 589, 1182, 1287, 1305, 1569
CciI	TCATGA	2 cut(s)	888, 1113
CfoI	GCGC	8 cut(s)	281, 321, 389, 497, 499, 1182, 1184, 1447
Cfr10I	RCCGGY	2 cut(s)	1184, 1567
Cfr13I	GGNCC	1 cut(s)	97
ClaI	ATCGAT	1 cut(s)	1167
DdeI	CTNAG	5 cut(s)	47, 169, 390, 1290, 1409
DinI	GGCGCC	1 cut(s)	1446
DpnI	GATC	7 cut(s)	30, 245, 551, 800, 1118, 1145, 1166
DpnII	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
Eam1104I	CTCTTC	4 cut(s)	160, 187, 1191, 1263
EarI	CTCTTC	4 cut(s)	160, 187, 1191, 1263
Eco130I	CCWWGG	1 cut(s)	1072
Eco24I	GRGCYC	2 cut(s)	1021, 1335
Eco47I	GGWCC	1 cut(s)	97
Eco88I	CYCGRG	1 cut(s)	1328
Eco91I	GGTNACC	1 cut(s)	572
EcoO65I	GGTNACC	1 cut(s)	572
EcoRI	GAATTC	1 cut(s)	1487
EcoT14I	CCWWGG	1 cut(s)	1072
EcoT38I	GRGCYC	2 cut(s)	1021, 1335
EgeI	GGCGCC	1 cut(s)	1446
EheI	GGCGCC	1 cut(s)	1446
ErhI	CCWWGG	1 cut(s)	1072
Esp3I	CGTCTC	1 cut(s)	289
FaqI	GGGAC	2 cut(s)	83, 1439
FauI	CCCGC	3 cut(s)	284, 500, 596
FauNDI	CATATG	1 cut(s)	459
FbaI	TGATCA	1 cut(s)	243
Fnu4HI	GCNGC	8 cut(s)	312, 426, 531, 750, 1159, 1266, 1301, 1601
FokI	GGATG	5 cut(s)	59, 489, 539, 1040, 1417
FriOI	GRGCYC	2 cut(s)	1021, 1335
Fsp4HI	GCNGC	8 cut(s)	312, 426, 531, 750, 1159, 1266, 1301, 1601
FspBI	CTAG	3 cut(s)	1091, 1382, 1524
GlaI	GCGC	8 cut(s)	280, 320, 388, 496, 498, 1181, 1183, 1446
GluI	GCNGC	8 cut(s)	312, 426, 531, 750, 1159, 1266, 1301, 1601
GsaI	CCCAGC	1 cut(s)	206
GsuI	CTGGAG	1 cut(s)	5
HaeII	RGCGCY	2 cut(s)	390, 1448
HaeIII	GGCC	4 cut(s)	165, 356, 686, 1095
HapII	CCGG	4 cut(s)	654, 1185, 1448, 1568
HhaI	GCGC	8 cut(s)	281, 321, 389, 497, 499, 1182, 1184, 1447
Hin1I	GRCGYC	1 cut(s)	1445
Hin6I	GCGC	8 cut(s)	279, 319, 387, 495, 497, 1180, 1182, 1445
HinP1I	GCGC	8 cut(s)	279, 319, 387, 495, 497, 1180, 1182, 1445
HinfI	GANTC	6 cut(s)	138, 326, 394, 1397, 1479, 1536
HpaII	CCGG	4 cut(s)	654, 1185, 1448, 1568
HphI	GGTGA	2 cut(s)	584, 682
Hpy166II	GTNNAC	3 cut(s)	115, 1150, 1521
Hpy188I	TCNGA	4 cut(s)	172, 393, 624, 1516
Hpy188III	TCNNGA	6 cut(s)	116, 538, 700, 889, 1114, 1193
Hpy8I	GTNNAC	3 cut(s)	115, 1150, 1521
HpyAV	CCTTC	5 cut(s)	346, 791, 908, 1001, 1435
HpyCH4III	ACNGT	5 cut(s)	54, 584, 694, 931, 1343
HpyCH4IV	ACGT	2 cut(s)	438, 627
HpyCH4V	TGCA	9 cut(s)	709, 854, 872, 924, 970, 980, 1161, 1355, 1521
HpyF3I	CTNAG	5 cut(s)	47, 169, 390, 1290, 1409
HpySE526I	ACGT	2 cut(s)	438, 627
Hsp92I	GRCGYC	1 cut(s)	1445
HspAI	GCGC	8 cut(s)	279, 319, 387, 495, 497, 1180, 1182, 1445
KasI	GGCGCC	1 cut(s)	1444
KroI	GCCGGC	1 cut(s)	1567
KroNI	GCCGGC	1 cut(s)	1569
Ksp22I	TGATCA	1 cut(s)	243
Kzo9I	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
LguI	GCTCTTC	1 cut(s)	160
LmnI	GCTCC	5 cut(s)	24, 62, 375, 509, 1597
Lsp1109I	GCAGC	3 cut(s)	1145, 1312, 1587
LweI	GCATC	5 cut(s)	421, 467, 517, 1212, 1395
MaeI	CTAG	3 cut(s)	1091, 1382, 1524
MaeII	ACGT	2 cut(s)	438, 627
MaeIII	GTNAC	2 cut(s)	572, 934
MalI	GATC	7 cut(s)	30, 245, 551, 800, 1118, 1145, 1166
MboI	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
MboII	GAAGA	7 cut(s)	147, 174, 181, 688, 1208, 1250, 1450
MflI	RGATCY	1 cut(s)	798
MhlI	GDGCHC	9 cut(s)	59, 351, 589, 769, 781, 1021, 1335, 1381, 1523
MluCI	AATT	4 cut(s)	121, 1416, 1487, 1607
Mly113I	GGCGCC	1 cut(s)	1445
MlyI	GAGTC	3 cut(s)	320, 1488, 1545
MmeI	TCCRAC	1 cut(s)	397
MroNI	GCCGGC	1 cut(s)	1567
MroXI	GAANNNNTTC	1 cut(s)	990
MseI	TTAA	4 cut(s)	846, 1107, 1215, 1545
MslI	CAYNNNNRTG	4 cut(s)	774, 1284, 1341, 1433
MspI	CCGG	4 cut(s)	654, 1185, 1448, 1568
MspR9I	CCNGG	1 cut(s)	1449
Mva1269I	GAATGC	2 cut(s)	618, 711
MvnI	CGCG	4 cut(s)	279, 495, 497, 1182
NaeI	GCCGGC	1 cut(s)	1569
NarI	GGCGCC	1 cut(s)	1445
NciI	CCSGG	1 cut(s)	1449
NcoI	CCATGG	1 cut(s)	1072
NdeI	CATATG	1 cut(s)	459
NdeII	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
NgoMIV	GCCGGC	1 cut(s)	1567
NlaIV	GGNNCC	4 cut(s)	99, 778, 800, 1446
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	1 cut(s)	572
NspI	RCATGY	3 cut(s)	868, 1289, 1307
OliI	CACNNNNGTG	1 cut(s)	1433
PaeI	GCATGC	2 cut(s)	1289, 1307
PaeR7I	CTCGAG	1 cut(s)	1328
PagI	TCATGA	2 cut(s)	888, 1113
PalAI	GGCGCGCC	1 cut(s)	1180
PaqCI	CACCTGC	1 cut(s)	158
PauI	GCGCGC	2 cut(s)	495, 1180
PciI	ACATGT	1 cut(s)	864
PciSI	GCTCTTC	1 cut(s)	160
PcsI	WCGNNNNNNNCGW	2 cut(s)	183, 576
PctI	GAATGC	2 cut(s)	618, 711
PdiI	GCCGGC	1 cut(s)	1569
PdmI	GAANNNNTTC	1 cut(s)	990
PfeI	GAWTC	3 cut(s)	138, 394, 1397
PkrI	GCNGC	8 cut(s)	313, 427, 532, 751, 1160, 1267, 1302, 1602
PleI	GAGTC	3 cut(s)	320, 1487, 1544
PluTI	GGCGCC	1 cut(s)	1448
PpsI	GAGTC	3 cut(s)	320, 1487, 1544
PscI	ACATGT	1 cut(s)	864
PsiI	TTATAA	1 cut(s)	1322
PspEI	GGTNACC	1 cut(s)	572
PspFI	CCCAGC	1 cut(s)	202
PspN4I	GGNNCC	4 cut(s)	99, 778, 800, 1446
PspPI	GGNCC	1 cut(s)	97
PspXI	VCTCGAGB	1 cut(s)	1328
PsuI	RGATCY	1 cut(s)	798
PteI	GCGCGC	2 cut(s)	495, 1180
RseI	CAYNNNNRTG	4 cut(s)	774, 1284, 1341, 1433
SapI	GCTCTTC	1 cut(s)	160
SaqAI	TTAA	4 cut(s)	846, 1107, 1215, 1545
SatI	GCNGC	8 cut(s)	312, 426, 531, 750, 1159, 1266, 1301, 1601
Sau3AI	GATC	7 cut(s)	28, 243, 549, 798, 1116, 1143, 1164
Sau96I	GGNCC	1 cut(s)	97
SchI	GAGTC	3 cut(s)	320, 1488, 1545
ScrFI	CCNGG	1 cut(s)	1449
SduI	GDGCHC	9 cut(s)	59, 351, 589, 769, 781, 1021, 1335, 1381, 1523
SfaNI	GCATC	5 cut(s)	421, 467, 517, 1212, 1395
SfoI	GGCGCC	1 cut(s)	1446
Sfr274I	CTCGAG	1 cut(s)	1328
SgsI	GGCGCGCC	1 cut(s)	1180
SinI	GGWCC	1 cut(s)	97
SlaI	CTCGAG	1 cut(s)	1328
SmiMI	CAYNNNNRTG	4 cut(s)	774, 1284, 1341, 1433
SmlI	CTYRAG	2 cut(s)	350, 1328
SmoI	CTYRAG	2 cut(s)	350, 1328
SphI	GCATGC	2 cut(s)	1289, 1307
Sse9I	AATT	4 cut(s)	121, 1416, 1487, 1607
SspDI	GGCGCC	1 cut(s)	1444
SspMI	CTAG	3 cut(s)	1091, 1382, 1524
StyD4I	CCNGG	1 cut(s)	1447
StyI	CCWWGG	1 cut(s)	1072
TaaI	ACNGT	5 cut(s)	54, 584, 694, 931, 1343
TaiI	ACGT	2 cut(s)	441, 630
TaqI	TCGA	7 cut(s)	31, 144, 579, 861, 1078, 1167, 1329
TasI	AATT	4 cut(s)	121, 1416, 1487, 1607
TauI	GCSGC	5 cut(s)	314, 428, 533, 752, 1268
TfiI	GAWTC	3 cut(s)	138, 394, 1397
Tru1I	TTAA	4 cut(s)	846, 1107, 1215, 1545
Tru9I	TTAA	4 cut(s)	846, 1107, 1215, 1545
TscAI	CASTG	8 cut(s)	59, 203, 404, 421, 451, 589, 747, 1348
TseFI	GTSAC	1 cut(s)	572
TseI	GCWGC	3 cut(s)	1158, 1300, 1600
Tsp45I	GTSAC	1 cut(s)	572
TspDTI	ATGAA	6 cut(s)	130, 446, 905, 1036, 1480, 1500
TspGWI	ACGGA	1 cut(s)	175
TspRI	CASTG	8 cut(s)	59, 203, 404, 421, 451, 589, 747, 1348
VneI	GTGCAC	1 cut(s)	1519
VpaK11BI	GGWCC	1 cut(s)	97
XapI	RAATTY	3 cut(s)	121, 1487, 1607
XceI	RCATGY	3 cut(s)	868, 1289, 1307
XcmI	CCANNNNNNNNNTGG	1 cut(s)	83
XhoI	CTCGAG	1 cut(s)	1328
XmnI	GAANNNNTTC	1 cut(s)	990
XspI	CTAG	3 cut(s)	1091, 1382, 1524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.