FvH4_4g06980

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
6332045 .. 6334046
2002 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g06980.t1

Sequence Viewer

Length: 174 bp
ATGATTGGCGTTTTGAATCAGAGGATTATTTTTGGAGGAGTTCCATTTGGGCGGTGCTTCGGGTTTGGTGGTTGGGTTTGTCTTGCCGACGCTTTTGGGTTGCTTTTGGCTTCTTCCGTCTTCCAAAGTGAAATTGGTTCTACCTTGATAGTGATCGCATTGATTCGGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.05

Weight (kDa)

7.83

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018786)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 52
AgsI TTSAA 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 112
BpiI GAAGAC 1 cut(s) 112
BsaBI GATNNNNATC 1 cut(s) 152
Bse8I GATNNNNATC 1 cut(s) 152
BseJI GATNNNNATC 1 cut(s) 152
BseRI GAGGAG 1 cut(s) 51
Bsp143I GATC 1 cut(s) 153
BspACI CCGC 1 cut(s) 52
BssMI GATC 1 cut(s) 153
BstKTI GATC 1 cut(s) 156
BstMBI GATC 1 cut(s) 153
BstV2I GAAGAC 1 cut(s) 112
CseI GACGC 1 cut(s) 98
CviJI RGCY 2 cut(s) 110, 169
CviKI_1 RGCY 2 cut(s) 110, 169
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
HgaI GACGC 1 cut(s) 98
HinfI GANTC 2 cut(s) 16, 163
Hpy188I TCNGA 1 cut(s) 21
Hpy99I CGWCG 1 cut(s) 92
Kzo9I GATC 1 cut(s) 153
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MboII GAAGA 2 cut(s) 105, 112
MluCI AATT 1 cut(s) 132
MnlI CCTC 2 cut(s) 15, 29
NdeII GATC 1 cut(s) 153
PfeI GAWTC 2 cut(s) 16, 163
Sau3AI GATC 1 cut(s) 153
SetI ASST 1 cut(s) 146
SgeI CNNG 3 cut(s) 73, 95, 157
Sse9I AATT 1 cut(s) 132
SsiI CCGC 1 cut(s) 52
TasI AATT 1 cut(s) 132
TfiI GAWTC 2 cut(s) 16, 163
TspGWI ACGGA 1 cut(s) 106
XcmI CCANNNNNNNNNTGG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.