FvH4_4g22160

Pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0013658
Physical Location & Seq
Forward (+)
25084880 .. 25088199
3320 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22160.t1

Sequence Viewer

Length: 1971 bp
ATGGAAGCCCTTCCATCCCTACAAACCCAGCGTCTCCTCATCAAGGACAACCCAATCAACTGCGCTTCCCAGCAAAGACATTCCCGAAATGTCCAGACACCCAGGAAGGTCGCCTTGGCACACCGAGCGTTCGACGGAATGTCTCACTCAGACACCTACGCTTGGAACAAGCTCATACAAACCCACATTGCGAACAATGACTTCCACTACGCCGTTTCTACTTATGACCAAATGCTCCACCGCGGCGTTCGCCCAGATAGGCACACTCTGCCTCGGGCCTTATCCGCTTCTCGCCTCTCGGATGATCTCTCTCTCGGCAAGCAACTACATTGCCATGCTGTGAAGTTTGGTTGCGCGAATGACCGTTATGTCATTGCTGCTCTGATTGAGCTTTATGGGAGGCTGCAGAGCGCTGACACGGCGAAATGTGTGTTTGATAAGGCTAGTGTGAAGGACTTGGTGTCGTGGACTATGATAGCTAGGTTGTACATTGTGGAAGGTAAGCCGAGAATGGCGCTTGATATGTTTGATGGGATGGTTGAGTCTGGGGCTAAGATGGATGCGGTGGCGCTGGCTACGGCTGCTGGAGCTTGTGGGATGATGAAGTCAATGACTGATGGAGTGAAAGTCCACCGGGTTGCTAAGGAGCAGGGGTTGGAGTTTGATGTGTTGGTGAGCAATAGTCTCTCGAAAATGTACATTGATTGTGGCTGTCTAGAGGATGCTCGAGCAATTTTCGATCAGAGGCCTGCTAAAGATGTCATTTCGTGGACAGAGATGATTCGTGTTTATGTGAAGAAGGGAGGGTTCAATGAGGGACTTAAATTGTTTCGGCAGATGGCTGCAGATGGACTGAAACCGGATCAACTCTCGGTATCTAGCGTCCTCCCGGCCTGTGCAAGAGTGTCTGCCTATAAACAAGGTAAGGAAATTCATGGATACTTGCTCCGAAATGGAATCCATATGAATCTTACTGTCCAGAATGCTCTTATGGACATGTATATCAAATCAGGATTTATTGAATCTGCTTTGAAAATTTTTGCTGGGCTGAAACACAAAGATGTTATTTCATATACTGTGATGATATTGGGGTACAGCTTACATGGACAAGGACCCCTTGGAGTTGATTTATTCCGACAAATGGAGAAAGAATTGAGCATAAAGATTGATGAATTAACATATGCTGCTGTTCTTCATGCTTGTGTTGCTGCACGAATGGTTAAGGAAGGAAAGTGTTACTTCAACTGTATCAAGACACCTACAGTTGCTCATTGTGCTTTGTTAGTAGCTCTTTTATCCCATTCTGGACTCTTTGATGAGGCAAGGAGCTTCATATCAGAGAAAAGAATTGAAGGACATGCTGAGGTACTGAGAGCACTGCTAGATGGCTGTAGGATCCACAAGCAATTGATATTAGGTAAGCGGCTTGCTGAACAGCTCTGTGATTTGGAACCTCTTAATCCTGATAATTATGTGTTACTCTCCAATTTGTATGCGGACAATGAAAAATGGGACACGGTCTTTTCACTGAGAGGAATGATTACAGACATGGGTTTGAAACCGAAGGAAGCTTTTTCTTGGATAGAATTCAGAAACAAAATTCATGTGTTTGGGACGAGAGATGCAGCTCACCCAAGATCAGAGAGACTATACTGGGAGCTGCAGTCTCTGATGAAGAAAATGGAAGATGAAGATATCATACCTGATTTGGATTATAGTCTCCACGATGTTTATGAAGAGCGGGAGTGCATTCAAATTGGGCACAGTGAAATGTTGGCAATTTCTTTTGGTCTCATCAGTTCACAAACTGGAACAACAATACGTGTAACTAAGAACCTCCGGGTGTGTCGCAACTGTCATGCTTCTGCCAAAGCTATATCCAAGATGGTAGGACGAGAAATAATACTCAAGGACCCAAAATGTTTCCACCATTTTAAGGATGGCTATTGTTCATGTGGTGATTTTTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

657

Amino Acids

73.78

Weight (kDa)

8.44

Isoelectric Point (pI)

35.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 51 - 89 8.1e-07 PPR repeat family
PPR_2 PF13041 252 - 301 2.2e-08 PPR repeat family
PPR_2 PF13041 353 - 402 4.8e-06 PPR repeat family
E_motif PF20431 469 - 529 2.6e-08 E motif
DYW_deaminase PF14432 568 - 656 4.2e-33 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 368
AccBSI CCGCTC 1 cut(s) 1741
AccII CGCG 2 cut(s) 243, 356
AciI CCGC 7 cut(s) 241, 243, 285, 563, 1423, 1496, 1741
AclWI GGATC 3 cut(s) 870, 1390, 1403
AcsI RAATTY 4 cut(s) 930, 1035, 1586, 1599
AfaI GTAC 4 cut(s) 488, 698, 1094, 1368
AfeI AGCGCT 1 cut(s) 412
AfiI CCNNNNNNNGG 4 cut(s) 43, 162, 1141, 1936
AflIII ACRYGT 2 cut(s) 996, 1822
AgsI TTSAA 7 cut(s) 811, 1022, 1033, 1243, 1352, 1558, 1754
AhdI GACNNNNNGTC 2 cut(s) 139, 460
AjnI CCWGG 1 cut(s) 101
AjuI GAANNNNNNNTTGG 2 cut(s) 98, 130
Alw21I GWGCWC 1 cut(s) 1378
Alw26I GTCTC 7 cut(s) 38, 147, 689, 1639, 1671, 1724, 1796
AlwI GGATC 3 cut(s) 870, 1390, 1403
AlwNI CAGNNNCTG 1 cut(s) 1669
Ama87I CYCGRG 2 cut(s) 273, 726
Aor51HI AGCGCT 1 cut(s) 412
AoxI GGCC 3 cut(s) 276, 746, 891
ApeKI GCWGC 8 cut(s) 377, 403, 581, 842, 1184, 1208, 1625, 1660
ApoI RAATTY 4 cut(s) 930, 1035, 1586, 1599
ArsI GACNNNNNNTTYG 2 cut(s) 16, 48
Asp700I GAANNNNTTC 1 cut(s) 9
AspLEI GCGC 5 cut(s) 65, 356, 413, 517, 571
AspS9I GGNCC 3 cut(s) 276, 1112, 1912
AsuC2I CCSGG 3 cut(s) 635, 890, 1841
AsuHPI GGTGA 3 cut(s) 685, 1622, 1970
AvaI CYCGRG 2 cut(s) 273, 726
AvaII GGWCC 2 cut(s) 1112, 1912
BaeGI GKGCMC 1 cut(s) 1764
BamHI GGATCC 1 cut(s) 1395
BarI GAAGNNNNNNTAC 2 cut(s) 1683, 1715
Bbv12I GWGCWC 1 cut(s) 1378
BbvCI CCTCAGC 1 cut(s) 1362
BbvI GCAGC 8 cut(s) 364, 390, 568, 829, 1171, 1195, 1637, 1647
BceAI ACGGC 3 cut(s) 197, 435, 594
BciT130I CCWGG 1 cut(s) 103
BciVI GTATCC 1 cut(s) 932
BcnI CCSGG 3 cut(s) 635, 890, 1841
BcoDI GTCTC 7 cut(s) 38, 147, 689, 1639, 1671, 1724, 1796
BfaI CTAG 5 cut(s) 444, 480, 716, 879, 1382
BfmI CTRYAG 5 cut(s) 404, 843, 1260, 1390, 1661
BfoI RGCGCY 3 cut(s) 414, 518, 572
BfuI GTATCC 1 cut(s) 932
Bme1390I CCNGG 4 cut(s) 103, 635, 890, 1841
Bme18I GGWCC 2 cut(s) 1112, 1912
BmeRI GACNNNNNGTC 2 cut(s) 139, 460
BmeT110I CYCGRG 2 cut(s) 273, 726
BmgT120I GGNCC 3 cut(s) 276, 1112, 1912
BmiI GGNNCC 4 cut(s) 1114, 1397, 1452, 1914
BmrFI CCNGG 4 cut(s) 103, 635, 890, 1841
BmrI ACTGGG 1 cut(s) 1663
BmsI GCATC 3 cut(s) 550, 712, 1612
BmuI ACTGGG 1 cut(s) 1663
BpmI CTGGAG 1 cut(s) 606
Bpu10I CCTNAGC 2 cut(s) 642, 1362
BpuEI CTTGAG 1 cut(s) 1892
BpuMI CCSGG 3 cut(s) 635, 890, 1841
BsaAI YACGTR 1 cut(s) 1823
BsaI GGTCTC 1 cut(s) 1796
BsaJI CCNNGG 5 cut(s) 101, 114, 241, 272, 1117
BsaWI WCCGGW 1 cut(s) 859
BsaXI ACNNNNNCTCC 6 cut(s) 612, 638, 642, 668, 1649, 1679
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 162, 1141, 1936
Bse1I ACTGG 2 cut(s) 1658, 1813
Bse3DI GCAATG 3 cut(s) 186, 328, 372
BseBI CCWGG 1 cut(s) 103
BseDI CCNNGG 5 cut(s) 101, 114, 241, 272, 1117
BseGI GGATG 7 cut(s) 14, 307, 540, 565, 603, 727, 1945
BseLI CCNNNNNNNGG 4 cut(s) 43, 162, 1141, 1936
BseMI GCAATG 3 cut(s) 186, 328, 372
BseMII CTCAG 4 cut(s) 162, 1353, 1361, 1520
BseNI ACTGG 2 cut(s) 1658, 1813
BseRI GAGGAG 1 cut(s) 26
BseSI GKGCMC 1 cut(s) 1764
BseXI GCAGC 8 cut(s) 364, 390, 568, 829, 1171, 1195, 1637, 1647
BseYI CCCAGC 3 cut(s) 27, 69, 1043
BsgI GTGCAG 1 cut(s) 1194
Bsh1236I CGCG 2 cut(s) 243, 356
BshFI GGCC 3 cut(s) 278, 748, 893
BsiHKAI GWGCWC 1 cut(s) 1378
BsiHKCI CYCGRG 2 cut(s) 273, 726
BsiSI CCGG 4 cut(s) 634, 860, 890, 1840
BslFI GGGAC 3 cut(s) 831, 1526, 1627
BslI CCNNNNNNNGG 4 cut(s) 43, 162, 1141, 1936
BsmAI GTCTC 7 cut(s) 38, 147, 689, 1639, 1671, 1724, 1796
BsmBI CGTCTC 1 cut(s) 38
BsmFI GGGAC 3 cut(s) 831, 1526, 1627
BsmI GAATGC 2 cut(s) 988, 1749
BsnI GGCC 3 cut(s) 278, 748, 893
Bso31I GGTCTC 1 cut(s) 1796
BsoBI CYCGRG 2 cut(s) 273, 726
Bsp1286I GDGCHC 2 cut(s) 1378, 1764
Bsp1407I TGTACA 2 cut(s) 486, 696
Bsp143I GATC 5 cut(s) 304, 739, 862, 1395, 1637
BspACI CCGC 7 cut(s) 241, 243, 285, 563, 1423, 1496, 1741
BspANI GGCC 3 cut(s) 278, 748, 893
BspCNI CTCAG 4 cut(s) 161, 1354, 1362, 1521
BspFNI CGCG 2 cut(s) 243, 356
BspLI GGNNCC 4 cut(s) 1114, 1397, 1452, 1914
BspMAI CTGCAG 3 cut(s) 408, 847, 1665
BspPI GGATC 3 cut(s) 870, 1390, 1403
BspQI GCTCTTC 1 cut(s) 1731
BspTNI GGTCTC 1 cut(s) 1796
BsrBI CCGCTC 1 cut(s) 1741
BsrDI GCAATG 3 cut(s) 186, 328, 372
BsrGI TGTACA 2 cut(s) 486, 696
BsrI ACTGG 2 cut(s) 1658, 1813
BssECI CCNNGG 5 cut(s) 101, 114, 241, 272, 1117
BssMI GATC 5 cut(s) 304, 739, 862, 1395, 1637
BssT1I CCWWGG 2 cut(s) 114, 1117
Bst2UI CCWGG 1 cut(s) 103
Bst4CI ACNGT 8 cut(s) 365, 976, 1078, 1247, 1264, 1519, 1766, 1856
Bst6I CTCTTC 1 cut(s) 1731
BstAPI GCANNNNNTGC 1 cut(s) 268
BstAUI TGTACA 2 cut(s) 486, 696
BstBAI YACGTR 1 cut(s) 1823
BstC8I GCNNGC 4 cut(s) 320, 573, 750, 1428
BstDEI CTNAG 7 cut(s) 148, 552, 642, 1362, 1370, 1529, 1830
BstDSI CCRYGG 1 cut(s) 241
BstENI CCTNNNNNAGG 1 cut(s) 41
BstF5I GGATG 7 cut(s) 14, 307, 540, 565, 603, 727, 1945
BstFNI CGCG 2 cut(s) 243, 356
BstH2I RGCGCY 3 cut(s) 414, 518, 572
BstHHI GCGC 5 cut(s) 65, 356, 413, 517, 571
BstKTI GATC 5 cut(s) 307, 742, 865, 1398, 1640
BstMAI GTCTC 7 cut(s) 38, 147, 689, 1639, 1671, 1724, 1796
BstMBI GATC 5 cut(s) 304, 739, 862, 1395, 1637
BstMWI GCNNNNNNNGC 9 cut(s) 125, 249, 268, 284, 419, 581, 587, 1205, 1274
BstNI CCWGG 1 cut(s) 103
BstNSI RCATGY 2 cut(s) 1000, 1361
BstSCI CCNGG 4 cut(s) 101, 633, 888, 1839
BstSFI CTRYAG 5 cut(s) 404, 843, 1260, 1390, 1661
BstSLI GKGCMC 1 cut(s) 1764
BstUI CGCG 2 cut(s) 243, 356
BstV1I GCAGC 8 cut(s) 364, 390, 568, 829, 1171, 1195, 1637, 1647
BstX2I RGATCY 1 cut(s) 1395
BstYI RGATCY 1 cut(s) 1395
BsuI GTATCC 1 cut(s) 932
BsuRI GGCC 3 cut(s) 278, 748, 893
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 7 cut(s) 14, 307, 540, 565, 603, 727, 1945
BtsI GCAGTG 1 cut(s) 1376
BtsIMutI CAGTG 3 cut(s) 1376, 1526, 1771
Cac8I GCNNGC 4 cut(s) 320, 573, 750, 1428
CaiI CAGNNNCTG 1 cut(s) 1669
CfoI GCGC 5 cut(s) 65, 356, 413, 517, 571
Cfr13I GGNCC 3 cut(s) 276, 1112, 1912
Cfr42I CCGCGG 1 cut(s) 244
CseI GACGC 2 cut(s) 20, 871
Csp6I GTAC 4 cut(s) 487, 697, 1093, 1367
CviQI GTAC 4 cut(s) 487, 697, 1093, 1367
DdeI CTNAG 7 cut(s) 148, 552, 642, 1362, 1370, 1529, 1830
DpnI GATC 5 cut(s) 306, 741, 864, 1397, 1639
DpnII GATC 5 cut(s) 304, 739, 862, 1395, 1637
DrdI GACNNNNNNGTC 1 cut(s) 368
DriI GACNNNNNGTC 2 cut(s) 139, 460
DseDI GACNNNNNNGTC 1 cut(s) 368
Eam1104I CTCTTC 1 cut(s) 1731
Eam1105I GACNNNNNGTC 2 cut(s) 139, 460
EarI CTCTTC 1 cut(s) 1731
Eco130I CCWWGG 2 cut(s) 114, 1117
Eco147I AGGCCT 1 cut(s) 748
Eco31I GGTCTC 1 cut(s) 1796
Eco32I GATATC 1 cut(s) 1696
Eco47I GGWCC 2 cut(s) 1112, 1912
Eco47III AGCGCT 1 cut(s) 412
Eco88I CYCGRG 2 cut(s) 273, 726
EcoNI CCTNNNNNAGG 1 cut(s) 41
EcoO109I RGGNCCY 2 cut(s) 1112, 1912
EcoRI GAATTC 1 cut(s) 1586
EcoRII CCWGG 1 cut(s) 101
EcoRV GATATC 1 cut(s) 1696
EcoT14I CCWWGG 2 cut(s) 114, 1117
ErhI CCWWGG 2 cut(s) 114, 1117
Esp3I CGTCTC 1 cut(s) 38
FalI AAGNNNNNCTT 6 cut(s) 98, 130, 1101, 1133, 1223, 1255
FaqI GGGAC 3 cut(s) 831, 1526, 1627
FauI CCCGC 1 cut(s) 1734
FauNDI CATATG 2 cut(s) 963, 1180
FokI GGATG 6 cut(s) 314, 547, 572, 610, 734, 1952
FspBI CTAG 5 cut(s) 444, 480, 716, 879, 1382
GlaI GCGC 5 cut(s) 64, 355, 412, 516, 570
GsaI CCCAGC 3 cut(s) 31, 73, 1047
GsuI CTGGAG 1 cut(s) 606
HaeII RGCGCY 3 cut(s) 414, 518, 572
HaeIII GGCC 3 cut(s) 278, 748, 893
HapII CCGG 4 cut(s) 634, 860, 890, 1840
HgaI GACGC 2 cut(s) 20, 871
HhaI GCGC 5 cut(s) 65, 356, 413, 517, 571
Hin6I GCGC 5 cut(s) 63, 354, 411, 515, 569
HinP1I GCGC 5 cut(s) 63, 354, 411, 515, 569
HindIII AAGCTT 1 cut(s) 1569
HinfI GANTC 6 cut(s) 542, 781, 957, 967, 1022, 1308
HpaII CCGG 4 cut(s) 634, 860, 890, 1840
HphI GGTGA 3 cut(s) 685, 1622, 1970
Hpy166II GTNNAC 4 cut(s) 468, 631, 771, 1802
Hpy188III TCNNGA 9 cut(s) 84, 94, 688, 716, 979, 1011, 1252, 1305, 1463
Hpy8I GTNNAC 4 cut(s) 468, 631, 771, 1802
Hpy99I CGWCG 1 cut(s) 137
HpyAV CCTTC 8 cut(s) 20, 100, 445, 491, 793, 1220, 1346, 1558
HpyCH4III ACNGT 8 cut(s) 365, 976, 1078, 1247, 1264, 1519, 1766, 1856
HpyCH4IV ACGT 1 cut(s) 1822
HpyCH4V TGCA 7 cut(s) 406, 845, 899, 1211, 1625, 1663, 1749
HpyF10VI GCNNNNNNNGC 9 cut(s) 125, 249, 268, 284, 419, 581, 587, 1205, 1274
HpyF3I CTNAG 7 cut(s) 148, 552, 642, 1362, 1370, 1529, 1830
HpySE526I ACGT 1 cut(s) 1822
HspAI GCGC 5 cut(s) 63, 354, 411, 515, 569
KspI CCGCGG 1 cut(s) 244
Kzo9I GATC 5 cut(s) 304, 739, 862, 1395, 1637
LguI GCTCTTC 1 cut(s) 1731
LmnI GCTCC 6 cut(s) 240, 587, 646, 951, 1326, 1657
Lsp1109I GCAGC 8 cut(s) 364, 390, 568, 829, 1171, 1195, 1637, 1647
LweI GCATC 3 cut(s) 550, 712, 1612
MaeI CTAG 5 cut(s) 444, 480, 716, 879, 1382
MaeII ACGT 1 cut(s) 1822
MaeIII GTNAC 3 cut(s) 1235, 1476, 1825
MalI GATC 5 cut(s) 306, 741, 864, 1397, 1639
MbiI CCGCTC 1 cut(s) 1741
MboI GATC 5 cut(s) 304, 739, 862, 1395, 1637
MboII GAAGA 6 cut(s) 808, 1184, 1687, 1697, 1703, 1748
MfeI CAATTG 1 cut(s) 1406
MflI RGATCY 1 cut(s) 1395
MhlI GDGCHC 2 cut(s) 1378, 1764
MlyI GAGTC 2 cut(s) 551, 1302
MmeI TCCRAC 2 cut(s) 636, 1159
MroXI GAANNNNTTC 1 cut(s) 9
MseI TTAA 5 cut(s) 822, 1175, 1221, 1458, 1935
MslI CAYNNNNRTG 3 cut(s) 333, 1059, 1200
MspA1I CMGCKG 1 cut(s) 243
MspI CCGG 4 cut(s) 634, 860, 890, 1840
MspR9I CCNGG 4 cut(s) 103, 635, 890, 1841
MunI CAATTG 1 cut(s) 1406
Mva1269I GAATGC 2 cut(s) 988, 1749
MvaI CCWGG 1 cut(s) 103
MvnI CGCG 2 cut(s) 243, 356
MwoI GCNNNNNNNGC 9 cut(s) 125, 249, 268, 284, 419, 581, 587, 1205, 1274
NciI CCSGG 3 cut(s) 635, 890, 1841
NdeI CATATG 2 cut(s) 963, 1180
NdeII GATC 5 cut(s) 304, 739, 862, 1395, 1637
NlaIV GGNNCC 4 cut(s) 1114, 1397, 1452, 1914
NmeAIII GCCGAG 2 cut(s) 294, 531
NspI RCATGY 2 cut(s) 1000, 1361
PaeR7I CTCGAG 1 cut(s) 726
PceI AGGCCT 1 cut(s) 748
PciI ACATGT 1 cut(s) 996
PciSI GCTCTTC 1 cut(s) 1731
PctI GAATGC 2 cut(s) 988, 1749
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 4 cut(s) 781, 957, 967, 1022
PflFI GACNNNGTC 1 cut(s) 1517
PleI GAGTC 2 cut(s) 550, 1302
PpsI GAGTC 2 cut(s) 550, 1302
Ppu21I YACGTR 1 cut(s) 1823
PpuMI RGGWCCY 2 cut(s) 1112, 1912
PscI ACATGT 1 cut(s) 996
Psp5II RGGWCCY 2 cut(s) 1112, 1912
Psp6I CCWGG 1 cut(s) 101
PspFI CCCAGC 3 cut(s) 27, 69, 1043
PspGI CCWGG 1 cut(s) 101
PspN4I GGNNCC 4 cut(s) 1114, 1397, 1452, 1914
PspPI GGNCC 3 cut(s) 276, 1112, 1912
PspPPI RGGWCCY 2 cut(s) 1112, 1912
PspXI VCTCGAGB 1 cut(s) 726
PstI CTGCAG 3 cut(s) 408, 847, 1665
PstNI CAGNNNCTG 1 cut(s) 1669
PsuI RGATCY 1 cut(s) 1395
PsyI GACNNNGTC 1 cut(s) 1517
RsaI GTAC 4 cut(s) 488, 698, 1094, 1368
RsaNI GTAC 4 cut(s) 487, 697, 1093, 1367
RseI CAYNNNNRTG 3 cut(s) 333, 1059, 1200
SacII CCGCGG 1 cut(s) 244
SapI GCTCTTC 1 cut(s) 1731
SaqAI TTAA 5 cut(s) 822, 1175, 1221, 1458, 1935
Sau3AI GATC 5 cut(s) 304, 739, 862, 1395, 1637
Sau96I GGNCC 3 cut(s) 276, 1112, 1912
SchI GAGTC 2 cut(s) 551, 1302
ScrFI CCNGG 4 cut(s) 103, 635, 890, 1841
SduI GDGCHC 2 cut(s) 1378, 1764
SfaNI GCATC 3 cut(s) 550, 712, 1612
SfcI CTRYAG 5 cut(s) 404, 843, 1260, 1390, 1661
Sfr274I CTCGAG 1 cut(s) 726
Sfr303I CCGCGG 1 cut(s) 244
SgrBI CCGCGG 1 cut(s) 244
SinI GGWCC 2 cut(s) 1112, 1912
SlaI CTCGAG 1 cut(s) 726
SmiMI CAYNNNNRTG 3 cut(s) 333, 1059, 1200
SmlI CTYRAG 2 cut(s) 726, 1907
SmoI CTYRAG 2 cut(s) 726, 1907
SseBI AGGCCT 1 cut(s) 748
SsiI CCGC 7 cut(s) 241, 243, 285, 563, 1423, 1496, 1741
SspMI CTAG 5 cut(s) 444, 480, 716, 879, 1382
StuI AGGCCT 1 cut(s) 748
StyD4I CCNGG 4 cut(s) 101, 633, 888, 1839
StyI CCWWGG 2 cut(s) 114, 1117
TaaI ACNGT 8 cut(s) 365, 976, 1078, 1247, 1264, 1519, 1766, 1856
TaiI ACGT 1 cut(s) 1825
TaqI TCGA 4 cut(s) 132, 689, 727, 738
TatI WGTACW 2 cut(s) 486, 696
TauI GCSGC 2 cut(s) 246, 1426
TfiI GAWTC 4 cut(s) 781, 957, 967, 1022
Tru1I TTAA 5 cut(s) 822, 1175, 1221, 1458, 1935
Tru9I TTAA 5 cut(s) 822, 1175, 1221, 1458, 1935
TscAI CASTG 3 cut(s) 1383, 1533, 1771
TseI GCWGC 8 cut(s) 377, 403, 581, 842, 1184, 1208, 1625, 1660
TspGWI ACGGA 1 cut(s) 150
TspRI CASTG 3 cut(s) 1383, 1533, 1771
Tth111I GACNNNGTC 1 cut(s) 1517
VpaK11BI GGWCC 2 cut(s) 1112, 1912
XagI CCTNNNNNAGG 1 cut(s) 41
XapI RAATTY 4 cut(s) 930, 1035, 1586, 1599
XbaI TCTAGA 1 cut(s) 715
XceI RCATGY 2 cut(s) 1000, 1361
XcmI CCANNNNNNNNNTGG 1 cut(s) 1937
XhoI CTCGAG 1 cut(s) 726
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 5 cut(s) 444, 480, 716, 879, 1382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.