Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0013658

Physical Location & Seq

Genomic Coordinates Forward (+)

51782502 .. 51784478

Gene Structure 1977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00370060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGAAGCCCTCCCATCAATACAAGCCCAGCGCCTTCTCATCAAGGACAATCCAATCAACCCTTCCCAGCAGAGACATGCCCGAAATGTTCAGACCCCAACGAAGGTCGCTGTGGCACACCAAATGTTCGACGGAATGCCCCAGTCAGACACCTACGCTTGGAATAGGCTTATCCAAACCCATATCGCCAACAATGACTTCCACCACGCCGTCTCTACTTACCACCAAATGCTCCACCGCGGTGTTCGCCCAGATAGGCACACTCTGCCTCGTGCATTATCCGCTTCTCGCCTCTCGGCTGATCTATCTCTCGGCAAACAACTCCATTGCCATGCTTTGAAATTCGGTTGCTCAAATGACCGGTACGTCATTGCTGCTCTCATTGAGCTTTATGGGCGTCTTCAGAGCGTTGACACGGCGAAATGGGTGTATGATAAGTCCAATGTGAGGGATTTGGTGTCATGGACTATGGTAGCTAGGTTGTACATTGCGGAAGGTAAGCCCAGAATGGCGCTTGATATGTTCGATAGAATGGTTGAGTCTGGTGCTGAGATAGATGCCGTGGCACTGGCGACGGCTGCTGGAGCTTGTGGCTTGTTGAAATCGATGACGGATGGAATGAAAGTCCACCGGGTTGCAAAAGAGCGGGGCTTGGAGTTTGATGTGTTGGTGAGCAATAGCCTCTCGAAAATGTACATTGATTGTGGCTGTGTAGAGGATGCTCGGGCGATTTTCGATCAGAGGCCTGCAAAAGATGTCATTTCGTGGACAGAGATGATACGTGTCTATGTGAAGAAGGGAGGTTTCAATGAGGGTGTTAAATTGTTTCGGCAGATGATTGCAGATGGACTGAAACCGGATCAACTCTCGGTATCTAGCGTCCTCCCAGCATGTGCGAGAGTGTCTGCCAGTAAACAAGGTAAGGAAATTCATGGATACTTGCTTCGAAATGGAATCCATATGAATCTCACTGTCCAGAATGCTCTTATGGACATGTATATCAAATCAGGATTTATTGAATGTGCTTCGAAAATTTTTGCCGGGTTGAAGCGCAAAGATGTTATTTCATGTACTGTGATGATATTAGGGTACAGCTTACATGGACAAGGTCACCTTGGAGTTGATTTGTTCCGCCAAATAGAGAAAGATTCGAGCATAAAGATTGATGAATTAACATATGCTGCTGTACTTCTTGCTTGTGTTGCTGCACGAATGGTAGAGGAAGGGAAGTTTTACTTCAACTGTATAAAGACACCTACAGTTGCACACTGTGCTTTGTTAGTAGCTCTTTTATCTCATTCTGGACTCTTTGATGAGGCAAGGAACTTCATATCAGAGAAAAGAATCGAAGGACATGCTGAGGTACTGAGAGCACTGCTAGATGGCTGTAGGATTCATAAGCAATTGATATTAGGTAAGCGGCTTGCTGAGCAGCTCTGTGATTTGGAACCTCTTAATCCCGATAACTATGTGTTACTCTCCAATCTGTATGCTGACAATGCAAAATGGGACATGGTCTTTGCACTGAGAGGAATGATTACTGACATGGGTCTGAAACCGAGGGAAGCTTGTTCTTGGATAGAATTCAGAAACAAAATTCATGTGTTCGGCACGAGAGATGCAGCTCACCCAAGATCAGAGAGACTATACTGGGAGCTGCAGTGTCTGACAAAGAAAATGGAAGATGAAGATATCAGACTTGATTTGGATTATAGTCTCCATGATGTTTATGAAGAGCGGGAGTGCATTCAAATTGGACACAGTGAGATGTTGGCAATTTCTTTTGGTCTCATCAGTACACTAGCTGGAACAACAATACGTGTAACTAAGAACCTCCGGGTGTGCCGCAATTGCCATGCTTCTGCAAAAGCTATATCCAAGATGGTAGGACGAGAAATCATACTCAAGGACCCAAATTGTTTCCACCATTTTAAGGATGGATATTGTTCATGTGGTGATTTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

655

Amino Acids

73.75

Weight (kDa)

8.44

Isoelectric Point (pI)

36.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	50 - 88	2.6e-07	PPR repeat family
PPR_2	PF13041	251 - 300	2.3e-08	PPR repeat family
E_motif	PF20431	468 - 528	8.8e-10	E motif
DYW_deaminase	PF14432	568 - 655	7.6e-33	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013658)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g22160 FvH4_4g22160
malus_domestica	MD00G1011100.v1.1 MD00G1167900.v1.1 MD02G1251400.v1.1 MD11G1025800.v1.1 MD12G1177100.v1.1
prunus_persica	Prupe.1G211300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0428391
rosa_laevigata	RLG00000007155
rosa_multiflora	Rmu_sc0004698.1_g000005
rosa_roxburghii	Rroxscaffold_5G00370060
rosa_rugosa	Rorug04G0225200
rosa_samantha	Rh4AG282300 Rh4BG287900 Rh4CG303700 Rh4DG285000
rosa_wichuraiana	Rw4G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	365
AccBSI	CCGCTC	2 cut(s)	646, 1738
AccII	CGCG	1 cut(s)	240
AciI	CCGC	9 cut(s)	238, 240, 282, 491, 646, 1132, 1420, 1738, 1846
AclWI	GGATC	1 cut(s)	867
AcsI	RAATTY	5 cut(s)	341, 927, 1032, 1583, 1596
AcuI	CTGAAG	1 cut(s)	386
AcyI	GRCGYC	1 cut(s)	397
AdeI	CACNNNGTG	1 cut(s)	1271
AfaI	GTAC	8 cut(s)	365, 485, 695, 1072, 1091, 1188, 1365, 1798
AfiI	CCNNNNNNNGG	4 cut(s)	103, 159, 447, 1933
AflIII	ACRYGT	3 cut(s)	781, 993, 1819
AgeI	ACCGGT	1 cut(s)	360
AgsI	TTSAA	7 cut(s)	340, 601, 808, 1019, 1048, 1240, 1751
AjuI	GAANNNNNNNTTGG	4 cut(s)	46, 78, 182, 214
AleI	CACNNNNGTG	1 cut(s)	240
Alw21I	GWGCWC	1 cut(s)	1375
Alw26I	GTCTC	5 cut(s)	67, 217, 1636, 1721, 1793
AlwI	GGATC	1 cut(s)	867
AlwNI	CAGNNNCTG	1 cut(s)	1666
Ama87I	CYCGRG	1 cut(s)	723
AoxI	GGCC	1 cut(s)	743
ApeKI	GCWGC	7 cut(s)	374, 578, 1181, 1205, 1432, 1622, 1657
ApoI	RAATTY	5 cut(s)	341, 927, 1032, 1583, 1596
ArsI	GACNNNNNNTTYG	2 cut(s)	1502, 1534
AsiGI	ACCGGT	1 cut(s)	360
AspLEI	GCGC	3 cut(s)	33, 514, 1053
AspS9I	GGNCC	1 cut(s)	1909
AsuC2I	CCSGG	3 cut(s)	632, 1042, 1838
AsuHPI	GGTGA	4 cut(s)	682, 1103, 1619, 1967
AsuII	TTCGAA	2 cut(s)	946, 1028
AvaI	CYCGRG	1 cut(s)	723
AvaII	GGWCC	1 cut(s)	1909
BauI	CACGAG	2 cut(s)	270, 1612
BbsI	GAAGAC	1 cut(s)	392
Bbv12I	GWGCWC	1 cut(s)	1375
BbvCI	CCTCAGC	1 cut(s)	1359
BbvI	GCAGC	7 cut(s)	361, 565, 1168, 1192, 1444, 1634, 1644
BccI	CCATC	6 cut(s)	22, 608, 839, 1376, 1876, 1931
BceAI	ACGGC	4 cut(s)	194, 432, 545, 591
BcgI	CGANNNNNNTGC	2 cut(s)	1337, 1371
BciVI	GTATCC	1 cut(s)	929
BcnI	CCSGG	3 cut(s)	632, 1042, 1838
BcoDI	GTCTC	5 cut(s)	67, 217, 1636, 1721, 1793
BfaI	CTAG	4 cut(s)	477, 876, 1379, 1802
BfmI	CTRYAG	3 cut(s)	1257, 1387, 1658
BfoI	RGCGCY	2 cut(s)	34, 515
BfuI	GTATCC	1 cut(s)	929
BisI	GCNGC	9 cut(s)	375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
BlpI	GCTNAGC	1 cut(s)	1428
BlsI	GCNGC	9 cut(s)	376, 580, 1183, 1207, 1422, 1434, 1624, 1659, 1847
Bme1390I	CCNGG	3 cut(s)	632, 1042, 1838
Bme18I	GGWCC	1 cut(s)	1909
BmeT110I	CYCGRG	1 cut(s)	723
BmgT120I	GGNCC	1 cut(s)	1909
BmiI	GGNNCC	2 cut(s)	1449, 1911
BmrFI	CCNGG	3 cut(s)	632, 1042, 1838
BmrI	ACTGGG	2 cut(s)	136, 1660
BmsI	GCATC	3 cut(s)	547, 709, 1609
BmuI	ACTGGG	2 cut(s)	136, 1660
BoxI	GACNNNNGTC	1 cut(s)	1548
BpiI	GAAGAC	1 cut(s)	392
BpmI	CTGGAG	1 cut(s)	603
Bpu10I	CCTNAGC	1 cut(s)	1359
Bpu1102I	GCTNAGC	1 cut(s)	1428
Bpu14I	TTCGAA	2 cut(s)	946, 1028
BpuEI	CTTGAG	1 cut(s)	1889
BpuMI	CCSGG	3 cut(s)	632, 1042, 1838
Bsa29I	ATCGAT	1 cut(s)	605
BsaAI	YACGTR	2 cut(s)	782, 1820
BsaHI	GRCGYC	1 cut(s)	397
BsaI	GGTCTC	1 cut(s)	1793
BsaJI	CCNNGG	4 cut(s)	238, 561, 1114, 1559
BsaWI	WCCGGW	2 cut(s)	360, 856
BsaXI	ACNNNNNCTCC	2 cut(s)	1646, 1676
Bsc4I	CCNNNNNNNGG	4 cut(s)	103, 159, 447, 1933
Bse118I	RCCGGY	1 cut(s)	360
Bse1I	ACTGG	4 cut(s)	142, 573, 909, 1655
Bse3DI	GCAATG	3 cut(s)	325, 369, 486
BseCI	ATCGAT	1 cut(s)	605
BseDI	CCNNGG	4 cut(s)	238, 561, 1114, 1559
BseGI	GGATG	3 cut(s)	619, 724, 1942
BseLI	CCNNNNNNNGG	4 cut(s)	103, 159, 447, 1933
BseMI	GCAATG	3 cut(s)	325, 369, 486
BseMII	CTCAG	5 cut(s)	540, 1350, 1358, 1419, 1517
BseNI	ACTGG	4 cut(s)	142, 573, 909, 1655
BseXI	GCAGC	7 cut(s)	361, 565, 1168, 1192, 1444, 1634, 1644
BseYI	CCCAGC	3 cut(s)	27, 66, 886
BsgI	GTGCAG	1 cut(s)	1191
Bsh1236I	CGCG	1 cut(s)	240
BshFI	GGCC	1 cut(s)	745
BshTI	ACCGGT	1 cut(s)	360
BshVI	ATCGAT	1 cut(s)	605
BsiHKAI	GWGCWC	1 cut(s)	1375
BsiHKCI	CYCGRG	1 cut(s)	723
BsiSI	CCGG	5 cut(s)	361, 631, 857, 1041, 1837
BslFI	GGGAC	1 cut(s)	1523
BslI	CCNNNNNNNGG	4 cut(s)	103, 159, 447, 1933
BsmAI	GTCTC	5 cut(s)	67, 217, 1636, 1721, 1793
BsmBI	CGTCTC	1 cut(s)	217
BsmFI	GGGAC	1 cut(s)	1523
BsmI	GAATGC	3 cut(s)	141, 985, 1746
BsnI	GGCC	1 cut(s)	745
Bso31I	GGTCTC	1 cut(s)	1793
BsoBI	CYCGRG	1 cut(s)	723
Bsp119I	TTCGAA	2 cut(s)	946, 1028
Bsp1286I	GDGCHC	1 cut(s)	1375
Bsp1407I	TGTACA	2 cut(s)	483, 693
Bsp143I	GATC	4 cut(s)	301, 736, 859, 1634
Bsp1720I	GCTNAGC	1 cut(s)	1428
BspACI	CCGC	9 cut(s)	238, 240, 282, 491, 646, 1132, 1420, 1738, 1846
BspANI	GGCC	1 cut(s)	745
BspCNI	CTCAG	5 cut(s)	541, 1351, 1359, 1420, 1518
BspDI	ATCGAT	1 cut(s)	605
BspFNI	CGCG	1 cut(s)	240
BspLI	GGNNCC	2 cut(s)	1449, 1911
BspMAI	CTGCAG	1 cut(s)	1662
BspPI	GGATC	1 cut(s)	867
BspQI	GCTCTTC	1 cut(s)	1728
BspT104I	TTCGAA	2 cut(s)	946, 1028
BspTNI	GGTCTC	1 cut(s)	1793
BsrBI	CCGCTC	2 cut(s)	646, 1738
BsrDI	GCAATG	3 cut(s)	325, 369, 486
BsrFI	RCCGGY	1 cut(s)	360
BsrGI	TGTACA	2 cut(s)	483, 693
BsrI	ACTGG	4 cut(s)	142, 573, 909, 1655
BssAI	RCCGGY	1 cut(s)	360
BssECI	CCNNGG	4 cut(s)	238, 561, 1114, 1559
BssMI	GATC	4 cut(s)	301, 736, 859, 1634
BssNI	GRCGYC	1 cut(s)	397
BssSI	CACGAG	2 cut(s)	270, 1612
BssT1I	CCWWGG	1 cut(s)	1114
Bst2BI	CACGAG	2 cut(s)	270, 1612
Bst4CI	ACNGT	6 cut(s)	973, 1075, 1244, 1261, 1271, 1763
Bst6I	CTCTTC	1 cut(s)	1728
BstACI	GRCGYC	1 cut(s)	397
BstAPI	GCANNNNNTGC	2 cut(s)	265, 1271
BstAUI	TGTACA	2 cut(s)	483, 693
BstBAI	YACGTR	2 cut(s)	782, 1820
BstBI	TTCGAA	2 cut(s)	946, 1028
BstC8I	GCNNGC	2 cut(s)	747, 1425
BstDEI	CTNAG	6 cut(s)	549, 1359, 1367, 1428, 1526, 1827
BstDSI	CCRYGG	2 cut(s)	238, 561
BstEII	GGTNACC	1 cut(s)	1109
BstF5I	GGATG	3 cut(s)	619, 724, 1942
BstFNI	CGCG	1 cut(s)	240
BstH2I	RGCGCY	2 cut(s)	34, 515
BstHHI	GCGC	3 cut(s)	33, 514, 1053
BstKTI	GATC	4 cut(s)	304, 739, 862, 1637
BstMAI	GTCTC	5 cut(s)	67, 217, 1636, 1721, 1793
BstMBI	GATC	4 cut(s)	301, 736, 859, 1634
BstNSI	RCATGY	4 cut(s)	80, 894, 997, 1358
BstPAI	GACNNNNGTC	1 cut(s)	1548
BstPI	GGTNACC	1 cut(s)	1109
BstSCI	CCNGG	3 cut(s)	630, 1040, 1836
BstSFI	CTRYAG	3 cut(s)	1257, 1387, 1658
BstUI	CGCG	1 cut(s)	240
BstV1I	GCAGC	7 cut(s)	361, 565, 1168, 1192, 1444, 1634, 1644
BstV2I	GAAGAC	1 cut(s)	392
Bsu15I	ATCGAT	1 cut(s)	605
BsuI	GTATCC	1 cut(s)	929
BsuRI	GGCC	1 cut(s)	745
BsuTUI	ATCGAT	1 cut(s)	605
BtgI	CCRYGG	2 cut(s)	238, 561
BtsCI	GGATG	3 cut(s)	619, 724, 1942
BtsI	GCAGTG	2 cut(s)	1373, 1667
BtsIMutI	CAGTG	7 cut(s)	566, 969, 1267, 1373, 1523, 1667, 1768
Cac8I	GCNNGC	2 cut(s)	747, 1425
CaiI	CAGNNNCTG	1 cut(s)	1666
CfoI	GCGC	3 cut(s)	33, 514, 1053
Cfr10I	RCCGGY	1 cut(s)	360
Cfr13I	GGNCC	1 cut(s)	1909
Cfr42I	CCGCGG	1 cut(s)	241
ClaI	ATCGAT	1 cut(s)	605
CseI	GACGC	2 cut(s)	386, 868
Csp6I	GTAC	8 cut(s)	364, 484, 694, 1071, 1090, 1187, 1364, 1797
CspAI	ACCGGT	1 cut(s)	360
CviQI	GTAC	8 cut(s)	364, 484, 694, 1071, 1090, 1187, 1364, 1797
DdeI	CTNAG	6 cut(s)	549, 1359, 1367, 1428, 1526, 1827
DpnI	GATC	4 cut(s)	303, 738, 861, 1636
DpnII	GATC	4 cut(s)	301, 736, 859, 1634
DraIII	CACNNNGTG	1 cut(s)	1271
DrdI	GACNNNNNNGTC	1 cut(s)	365
DseDI	GACNNNNNNGTC	1 cut(s)	365
Eam1104I	CTCTTC	1 cut(s)	1728
EarI	CTCTTC	1 cut(s)	1728
EciI	GGCGGA	1 cut(s)	1121
Eco130I	CCWWGG	1 cut(s)	1114
Eco147I	AGGCCT	1 cut(s)	745
Eco31I	GGTCTC	1 cut(s)	1793
Eco32I	GATATC	1 cut(s)	1693
Eco47I	GGWCC	1 cut(s)	1909
Eco57I	CTGAAG	1 cut(s)	386
Eco88I	CYCGRG	1 cut(s)	723
Eco91I	GGTNACC	1 cut(s)	1109
EcoO109I	RGGNCCY	1 cut(s)	1909
EcoO65I	GGTNACC	1 cut(s)	1109
EcoRI	GAATTC	1 cut(s)	1583
EcoRV	GATATC	1 cut(s)	1693
EcoT14I	CCWWGG	1 cut(s)	1114
ErhI	CCWWGG	1 cut(s)	1114
Esp3I	CGTCTC	1 cut(s)	217
FalI	AAGNNNNNCTT	4 cut(s)	1098, 1130, 1220, 1252
FaqI	GGGAC	1 cut(s)	1523
FauI	CCCGC	2 cut(s)	639, 1731
FauNDI	CATATG	2 cut(s)	960, 1177
Fnu4HI	GCNGC	9 cut(s)	375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
FokI	GGATG	3 cut(s)	626, 731, 1949
Fsp4HI	GCNGC	9 cut(s)	375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
FspBI	CTAG	4 cut(s)	477, 876, 1379, 1802
GlaI	GCGC	3 cut(s)	32, 513, 1052
GluI	GCNGC	9 cut(s)	375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
GsaI	CCCAGC	3 cut(s)	31, 70, 890
GsuI	CTGGAG	1 cut(s)	603
HaeII	RGCGCY	2 cut(s)	34, 515
HaeIII	GGCC	1 cut(s)	745
HapII	CCGG	5 cut(s)	361, 631, 857, 1041, 1837
HgaI	GACGC	2 cut(s)	386, 868
HhaI	GCGC	3 cut(s)	33, 514, 1053
Hin1I	GRCGYC	1 cut(s)	397
Hin6I	GCGC	3 cut(s)	31, 512, 1051
HinP1I	GCGC	3 cut(s)	31, 512, 1051
HincII	GTYRAC	1 cut(s)	412
HindII	GTYRAC	1 cut(s)	412
HindIII	AAGCTT	1 cut(s)	1566
HinfI	GANTC	7 cut(s)	539, 954, 964, 1148, 1305, 1344, 1393
HpaII	CCGG	5 cut(s)	361, 631, 857, 1041, 1837
HphI	GGTGA	4 cut(s)	682, 1103, 1619, 1967
Hpy166II	GTNNAC	5 cut(s)	412, 628, 768, 914, 1799
Hpy188III	TCNNGA	5 cut(s)	685, 976, 1008, 1302, 1460
Hpy8I	GTNNAC	5 cut(s)	412, 628, 768, 914, 1799
Hpy99I	CGWCG	2 cut(s)	134, 577
HpyAV	CCTTC	7 cut(s)	44, 72, 97, 488, 790, 1217, 1343
HpyCH4III	ACNGT	6 cut(s)	973, 1075, 1244, 1261, 1271, 1763
HpyCH4IV	ACGT	3 cut(s)	366, 781, 1819
HpyF3I	CTNAG	6 cut(s)	549, 1359, 1367, 1428, 1526, 1827
HpySE526I	ACGT	3 cut(s)	366, 781, 1819
Hsp92I	GRCGYC	1 cut(s)	397
HspAI	GCGC	3 cut(s)	31, 512, 1051
KspI	CCGCGG	1 cut(s)	241
Kzo9I	GATC	4 cut(s)	301, 736, 859, 1634
LguI	GCTCTTC	1 cut(s)	1728
LmnI	GCTCC	3 cut(s)	237, 584, 1654
Lsp1109I	GCAGC	7 cut(s)	361, 565, 1168, 1192, 1444, 1634, 1644
LweI	GCATC	3 cut(s)	547, 709, 1609
MaeI	CTAG	4 cut(s)	477, 876, 1379, 1802
MaeII	ACGT	3 cut(s)	366, 781, 1819
MaeIII	GTNAC	3 cut(s)	1109, 1473, 1822
MalI	GATC	4 cut(s)	303, 738, 861, 1636
MbiI	CCGCTC	2 cut(s)	646, 1738
MboI	GATC	4 cut(s)	301, 736, 859, 1634
MboII	GAAGA	5 cut(s)	392, 805, 1694, 1700, 1745
MfeI	CAATTG	2 cut(s)	1403, 1849
MhlI	GDGCHC	1 cut(s)	1375
MlyI	GAGTC	2 cut(s)	548, 1299
MseI	TTAA	4 cut(s)	819, 1172, 1455, 1932
MslI	CAYNNNNRTG	2 cut(s)	240, 330
MspA1I	CMGCKG	1 cut(s)	240
MspI	CCGG	5 cut(s)	361, 631, 857, 1041, 1837
MspR9I	CCNGG	3 cut(s)	632, 1042, 1838
MunI	CAATTG	2 cut(s)	1403, 1849
Mva1269I	GAATGC	3 cut(s)	141, 985, 1746
MvnI	CGCG	1 cut(s)	240
NciI	CCSGG	3 cut(s)	632, 1042, 1838
NdeI	CATATG	2 cut(s)	960, 1177
NdeII	GATC	4 cut(s)	301, 736, 859, 1634
NlaIV	GGNNCC	2 cut(s)	1449, 1911
NmeAIII	GCCGAG	2 cut(s)	275, 291
NmuCI	GTSAC	1 cut(s)	1109
NspI	RCATGY	4 cut(s)	80, 894, 997, 1358
NspV	TTCGAA	2 cut(s)	946, 1028
OliI	CACNNNNGTG	1 cut(s)	240
PceI	AGGCCT	1 cut(s)	745
PciI	ACATGT	1 cut(s)	993
PciSI	GCTCTTC	1 cut(s)	1728
PctI	GAATGC	3 cut(s)	141, 985, 1746
PfeI	GAWTC	5 cut(s)	954, 964, 1148, 1344, 1393
PflFI	GACNNNGTC	2 cut(s)	1107, 1514
PinAI	ACCGGT	1 cut(s)	360
PkrI	GCNGC	9 cut(s)	376, 580, 1183, 1207, 1422, 1434, 1624, 1659, 1847
PleI	GAGTC	2 cut(s)	547, 1299
PpsI	GAGTC	2 cut(s)	547, 1299
Ppu21I	YACGTR	2 cut(s)	782, 1820
PpuMI	RGGWCCY	1 cut(s)	1909
PscI	ACATGT	1 cut(s)	993
PshAI	GACNNNNGTC	1 cut(s)	1548
Psp5II	RGGWCCY	1 cut(s)	1909
PspEI	GGTNACC	1 cut(s)	1109
PspFI	CCCAGC	3 cut(s)	27, 66, 886
PspN4I	GGNNCC	2 cut(s)	1449, 1911
PspPI	GGNCC	1 cut(s)	1909
PspPPI	RGGWCCY	1 cut(s)	1909
PstI	CTGCAG	1 cut(s)	1662
PstNI	CAGNNNCTG	1 cut(s)	1666
PsyI	GACNNNGTC	2 cut(s)	1107, 1514
RsaI	GTAC	8 cut(s)	365, 485, 695, 1072, 1091, 1188, 1365, 1798
RsaNI	GTAC	8 cut(s)	364, 484, 694, 1071, 1090, 1187, 1364, 1797
RseI	CAYNNNNRTG	2 cut(s)	240, 330
SacII	CCGCGG	1 cut(s)	241
SapI	GCTCTTC	1 cut(s)	1728
SaqAI	TTAA	4 cut(s)	819, 1172, 1455, 1932
SatI	GCNGC	9 cut(s)	375, 579, 1182, 1206, 1421, 1433, 1623, 1658, 1846
Sau3AI	GATC	4 cut(s)	301, 736, 859, 1634
Sau96I	GGNCC	1 cut(s)	1909
SchI	GAGTC	2 cut(s)	548, 1299
ScrFI	CCNGG	3 cut(s)	632, 1042, 1838
SduI	GDGCHC	1 cut(s)	1375
SfaNI	GCATC	3 cut(s)	547, 709, 1609
SfcI	CTRYAG	3 cut(s)	1257, 1387, 1658
Sfr303I	CCGCGG	1 cut(s)	241
SfuI	TTCGAA	2 cut(s)	946, 1028
SgrBI	CCGCGG	1 cut(s)	241
SinI	GGWCC	1 cut(s)	1909
SmiMI	CAYNNNNRTG	2 cut(s)	240, 330
SmlI	CTYRAG	1 cut(s)	1904
SmoI	CTYRAG	1 cut(s)	1904
SseBI	AGGCCT	1 cut(s)	745
SsiI	CCGC	9 cut(s)	238, 240, 282, 491, 646, 1132, 1420, 1738, 1846
SspMI	CTAG	4 cut(s)	477, 876, 1379, 1802
StuI	AGGCCT	1 cut(s)	745
StyD4I	CCNGG	3 cut(s)	630, 1040, 1836
StyI	CCWWGG	1 cut(s)	1114
TaaI	ACNGT	6 cut(s)	973, 1075, 1244, 1261, 1271, 1763
TaiI	ACGT	3 cut(s)	369, 784, 1822
TaqI	TCGA	9 cut(s)	129, 525, 605, 686, 735, 946, 1028, 1151, 1347
TatI	WGTACW	5 cut(s)	483, 693, 1070, 1186, 1796
TauI	GCSGC	2 cut(s)	1423, 1848
TfiI	GAWTC	5 cut(s)	954, 964, 1148, 1344, 1393
Tru1I	TTAA	4 cut(s)	819, 1172, 1455, 1932
Tru9I	TTAA	4 cut(s)	819, 1172, 1455, 1932
TscAI	CASTG	7 cut(s)	573, 976, 1274, 1380, 1530, 1667, 1768
TseFI	GTSAC	1 cut(s)	1109
TseI	GCWGC	7 cut(s)	374, 578, 1181, 1205, 1432, 1622, 1657
Tsp45I	GTSAC	1 cut(s)	1109
TspGWI	ACGGA	2 cut(s)	147, 626
TspRI	CASTG	7 cut(s)	573, 976, 1274, 1380, 1530, 1667, 1768
Tth111I	GACNNNGTC	2 cut(s)	1107, 1514
VpaK11BI	GGWCC	1 cut(s)	1909
XapI	RAATTY	5 cut(s)	341, 927, 1032, 1583, 1596
XceI	RCATGY	4 cut(s)	80, 894, 997, 1358
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1934
XspI	CTAG	4 cut(s)	477, 876, 1379, 1802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.