Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0013658

Physical Location & Seq

Genomic Coordinates Reverse (-)

1366079 .. 1367572

Gene Structure 1494 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1011100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGGAAGCCCTTCTATCCGCCCAAATCCAGCGCTTGATCGTCACCGAGAACCCAATCAACACCGCCCACTACAAGCACTCCCGAAATGCTAAACCCACCACGAAGGTGGCCGTCACCCACAAGGTGTTCGACAAAATGCCCCACTCAGATACCTTCGCATGGAACAGACTTATCCAGACCCATATCGCCAATGCCGACTTCCTCCATGCCCACGCTCACAAGCTCGGCTGCTCTGGTGACCGGTACGTGGTTGCTGCTCTCATTGAGTTGTACGGTCGCCTCGACACCGCGGACTCCGCGAAAGGGCTGTTTGACAAGTCCCTGGTTAAGGACTCTGTTTCATGGACAATGCTGGCCAGGCTGTACATTACGGAAGGTAAACCCGGCAAGGCGGTTCATGTGTTTGAGAGAATGGTGGAGTCCGGAGCACAGATAGATTTTGTGGCTGTGGCGACGGCGGCTGGTGCCTGTGGCATGTTGAGATCGTTGATTGATGGAACAAAAGTCCACAGGGTTGCCAAGGAACGTGGATTGGAGTATGATGTGTTGGTGAGCAATACCCTCTTGAAAATATACATGGACTGTGGCTGTATCGACGAAGCTTGGGCAGTTTTCAACCAAATACCGGAGAAAGATGTCATTTCTTGGACAGAAATGATTCATGCCAATGTGAAGAGGGGATGCTTCAATGAGGGTCTTAAGCTGTTTAGGCAGATGGTTGGAGACGGGGTGAAACCTGATCCGCTCTCGGTCTCTAGTGTTCTCCCAGTATGCGCAAGAATGTCTGCAGGTAAACATGGCAAAGAGACTCATGGATTCTTGCTGCGACATGGCATTCGAATGAATCTCACCGTTCTGAATGCTCTTATGGACATGTATGTCAAGTCGGGATTTATCAAATCAGCTGCAAAAGTTTTTGCCAGGTCGAAGTACAGAGATCTTGTTTCGTGGACAGTGATGATAACTGGGTACAGCTTACACGGACAAGGAAAGATCGGAGTAGATTTATTCTGCCAAATGGAGAAGGAAACGAGTACACAGATCGATGAAATCACCTATGCTGCTGTCCTTCATGCTTGCGTTGCAGCACGCATGGTCGAGGAAGGGAAGTTTTACTTCAACTGCATCAAGACACCTACAGTTGCACATTGTGCTTTGTTCGTAACTCTTCTATCGCGTTCTGGGCTGTTTTATGAGGCAAAGAACTTTATTGCCGATAAAAAGACCGCATCGGATCCCGTCATGCCTGAACAAGAGCTCAAGGACTACGAGATCAACCTTAAGGATTGCAGGCCCATGGTGCTCGACACCCTCTTCATGCTTTTCTCGTCAAAATCACCTCGCCAGTACCTGCACCAGTATCTTAAAACTCCTCGAGGTCCTGCCATGGCGTCTCTGTCCGACATCAAGGCTGCACCACTCTTCTCTTGCACCGTCCTCCGTCTCTCGCCTCGCAGCTGCCACCAACTTCAAAGACCGCTGTCAAACGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

498

Amino Acids

55.43

Weight (kDa)

8.99

Isoelectric Point (pI)

29.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	211 - 259	6.2e-07	PPR repeat family
PPR_2	PF13041	313 - 361	1.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013658)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g22160 FvH4_4g22160
malus_domestica	MD00G1011100.v1.1 MD00G1167900.v1.1 MD02G1251400.v1.1 MD11G1025800.v1.1 MD12G1177100.v1.1
prunus_persica	Prupe.1G211300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0428391
rosa_laevigata	RLG00000007155
rosa_multiflora	Rmu_sc0004698.1_g000005
rosa_roxburghii	Rroxscaffold_5G00370060
rosa_rugosa	Rorug04G0225200
rosa_samantha	Rh4AG282300 Rh4BG287900 Rh4CG303700 Rh4DG285000
rosa_wichuraiana	Rw4G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	878
AbsI	CCTCGAGG	1 cut(s)	1374
Acc16I	TGCGCA	1 cut(s)	775
Acc36I	ACCTGC	2 cut(s)	779, 1359
AccB1I	GGYRCC	1 cut(s)	464
AccBSI	CCGCTC	1 cut(s)	745
AccII	CGCG	3 cut(s)	290, 299, 1177
AccIII	TCCGGA	1 cut(s)	422
AclWI	GGATC	3 cut(s)	734, 1229, 1242
AcoI	YGGCCR	2 cut(s)	108, 354
AcyI	GRCGYC	1 cut(s)	1391
AdeI	CACNNNGTG	2 cut(s)	124, 1151
AfaI	GTAC	7 cut(s)	245, 272, 365, 932, 971, 1036, 1349
AfeI	AGCGCT	1 cut(s)	32
AfiI	CCNNNNNNNGG	5 cut(s)	159, 247, 303, 328, 625
AflII	CTTAAG	2 cut(s)	698, 1280
AflIII	ACRYGT	1 cut(s)	873
AgeI	ACCGGT	1 cut(s)	240
AgsI	TTSAA	5 cut(s)	568, 616, 688, 1120, 1472
AjnI	CCWGG	3 cut(s)	321, 356, 920
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
AleI	CACNNNNGTG	1 cut(s)	104
AluBI	AGCT	7 cut(s)	223, 602, 703, 905, 975, 1258, 1458
AluI	AGCT	7 cut(s)	223, 602, 703, 905, 975, 1258, 1458
Alw21I	GWGCWC	3 cut(s)	430, 1260, 1305
Alw26I	GTCTC	5 cut(s)	717, 757, 800, 1398, 1448
AlwI	GGATC	3 cut(s)	734, 1229, 1242
AlwNI	CAGNNNCTG	1 cut(s)	1351
Ama87I	CYCGRG	1 cut(s)	1374
Aor13HI	TCCGGA	1 cut(s)	422
Aor51HI	AGCGCT	1 cut(s)	32
AoxI	GGCC	3 cut(s)	108, 354, 1292
ApeKI	GCWGC	9 cut(s)	228, 254, 823, 905, 1061, 1085, 1412, 1455, 1458
ArsI	GACNNNNNNTTYG	2 cut(s)	819, 851
AsiGI	ACCGGT	1 cut(s)	240
Asp700I	GAANNNNTTC	2 cut(s)	9, 657
AspLEI	GCGC	2 cut(s)	33, 776
AspS9I	GGNCC	2 cut(s)	1293, 1379
AsuC2I	CCSGG	1 cut(s)	384
AsuHPI	GGTGA	8 cut(s)	34, 106, 248, 562, 742, 841, 1045, 1329
AsuII	TTCGAA	1 cut(s)	838
AvaI	CYCGRG	1 cut(s)	1374
AvaII	GGWCC	1 cut(s)	1379
BalI	TGGCCA	1 cut(s)	356
BamHI	GGATCC	1 cut(s)	1234
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	1 cut(s)	1260
Bbv12I	GWGCWC	3 cut(s)	430, 1260, 1305
BbvI	GCAGC	9 cut(s)	215, 241, 810, 892, 1048, 1097, 1399, 1445, 1467
BccI	CCATC	2 cut(s)	488, 709
BceAI	ACGGC	2 cut(s)	95, 471
BciT130I	CCWGG	3 cut(s)	323, 358, 922
BcnI	CCSGG	1 cut(s)	384
BcoDI	GTCTC	5 cut(s)	717, 757, 800, 1398, 1448
BfaI	CTAG	2 cut(s)	756, 1492
BfmI	CTRYAG	2 cut(s)	786, 1137
BfoI	RGCGCY	1 cut(s)	34
BfrI	CTTAAG	2 cut(s)	698, 1280
BfuAI	ACCTGC	2 cut(s)	779, 1359
BglII	AGATCT	1 cut(s)	937
Bme1390I	CCNGG	4 cut(s)	323, 358, 384, 922
Bme18I	GGWCC	1 cut(s)	1379
BmeT110I	CYCGRG	1 cut(s)	1374
BmgT120I	GGNCC	2 cut(s)	1293, 1379
BmiI	GGNNCC	2 cut(s)	466, 1236
BmrFI	CCNGG	4 cut(s)	323, 358, 384, 922
BmrI	ACTGGG	2 cut(s)	761, 975
BmsI	GCATC	3 cut(s)	671, 1134, 1238
BmuI	ACTGGG	2 cut(s)	761, 975
BoxI	GACNNNNGTC	1 cut(s)	1480
Bpu14I	TTCGAA	1 cut(s)	838
BpuEI	CTTGAG	1 cut(s)	1244
BpuMI	CCSGG	1 cut(s)	384
Bsa29I	ATCGAT	1 cut(s)	1044
BsaAI	YACGTR	1 cut(s)	247
BsaHI	GRCGYC	1 cut(s)	1391
BsaI	GGTCTC	1 cut(s)	757
BsaJI	CCNNGG	5 cut(s)	288, 321, 519, 1296, 1386
BsaWI	WCCGGW	3 cut(s)	240, 422, 625
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 714, 744
Bsc4I	CCNNNNNNNGG	5 cut(s)	159, 247, 303, 328, 625
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	4 cut(s)	767, 970, 1345, 1357
BseAI	TCCGGA	1 cut(s)	422
BseBI	CCWGG	3 cut(s)	323, 358, 922
BseCI	ATCGAT	1 cut(s)	1044
BseDI	CCNNGG	5 cut(s)	288, 321, 519, 1296, 1386
BseGI	GGATG	1 cut(s)	686
BseLI	CCNNNNNNNGG	5 cut(s)	159, 247, 303, 328, 625
BseMII	CTCAG	1 cut(s)	159
BseNI	ACTGG	4 cut(s)	767, 970, 1345, 1357
BseRI	GAGGAG	1 cut(s)	1362
BseXI	GCAGC	9 cut(s)	215, 241, 810, 892, 1048, 1097, 1399, 1445, 1467
BsgI	GTGCAG	2 cut(s)	1337, 1398
Bsh1236I	CGCG	3 cut(s)	290, 299, 1177
Bsh1285I	CGRYCG	1 cut(s)	277
BshFI	GGCC	3 cut(s)	110, 356, 1294
BshNI	GGYRCC	1 cut(s)	464
BshTI	ACCGGT	1 cut(s)	240
BshVI	ATCGAT	1 cut(s)	1044
BsiEI	CGRYCG	1 cut(s)	277
BsiHKAI	GWGCWC	3 cut(s)	430, 1260, 1305
BsiHKCI	CYCGRG	1 cut(s)	1374
BsiSI	CCGG	4 cut(s)	241, 384, 423, 626
BslFI	GGGAC	1 cut(s)	304
BslI	CCNNNNNNNGG	5 cut(s)	159, 247, 303, 328, 625
BsmAI	GTCTC	5 cut(s)	717, 757, 800, 1398, 1448
BsmBI	CGTCTC	3 cut(s)	717, 1398, 1448
BsmFI	GGGAC	1 cut(s)	304
BsmI	GAATGC	2 cut(s)	834, 865
BsnI	GGCC	3 cut(s)	110, 356, 1294
Bso31I	GGTCTC	1 cut(s)	757
BsoBI	CYCGRG	1 cut(s)	1374
Bsp119I	TTCGAA	1 cut(s)	838
Bsp1286I	GDGCHC	3 cut(s)	430, 1260, 1305
Bsp13I	TCCGGA	1 cut(s)	422
Bsp1407I	TGTACA	1 cut(s)	363
Bsp143I	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
Bsp19I	CCATGG	2 cut(s)	1296, 1386
BspANI	GGCC	3 cut(s)	110, 356, 1294
BspCNI	CTCAG	1 cut(s)	158
BspDI	ATCGAT	1 cut(s)	1044
BspEI	TCCGGA	1 cut(s)	422
BspFNI	CGCG	3 cut(s)	290, 299, 1177
BspLI	GGNNCC	2 cut(s)	466, 1236
BspMAI	CTGCAG	1 cut(s)	790
BspMI	ACCTGC	2 cut(s)	779, 1359
BspPI	GGATC	3 cut(s)	734, 1229, 1242
BspT104I	TTCGAA	1 cut(s)	838
BspT107I	GGYRCC	1 cut(s)	464
BspTI	CTTAAG	2 cut(s)	698, 1280
BspTNI	GGTCTC	1 cut(s)	757
BsrBI	CCGCTC	1 cut(s)	745
BsrFI	RCCGGY	1 cut(s)	240
BsrGI	TGTACA	1 cut(s)	363
BsrI	ACTGG	4 cut(s)	767, 970, 1345, 1357
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	5 cut(s)	288, 321, 519, 1296, 1386
BssMI	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
BssNI	GRCGYC	1 cut(s)	1391
BssT1I	CCWWGG	3 cut(s)	519, 1296, 1386
Bst2UI	CCWGG	3 cut(s)	323, 358, 922
Bst4CI	ACNGT	6 cut(s)	275, 584, 853, 955, 1141, 1435
Bst6I	CTCTTC	4 cut(s)	668, 1173, 1319, 1427
BstACI	GRCGYC	1 cut(s)	1391
BstAFI	CTTAAG	2 cut(s)	698, 1280
BstAPI	GCANNNNNTGC	1 cut(s)	1151
BstAUI	TGTACA	1 cut(s)	363
BstBAI	YACGTR	1 cut(s)	247
BstBI	TTCGAA	1 cut(s)	838
BstC8I	GCNNGC	4 cut(s)	354, 1078, 1090, 1292
BstDEI	CTNAG	1 cut(s)	145
BstDSI	CCRYGG	3 cut(s)	288, 1296, 1386
BstEII	GGTNACC	1 cut(s)	236
BstENI	CCTNNNNNAGG	1 cut(s)	326
BstF5I	GGATG	1 cut(s)	686
BstFNI	CGCG	3 cut(s)	290, 299, 1177
BstH2I	RGCGCY	1 cut(s)	34
BstHHI	GCGC	2 cut(s)	33, 776
BstKTI	GATC	8 cut(s)	39, 485, 742, 940, 996, 1044, 1237, 1275
BstMAI	GTCTC	5 cut(s)	717, 757, 800, 1398, 1448
BstMBI	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
BstMCI	CGRYCG	1 cut(s)	277
BstMWI	GCNNNNNNNGC	9 cut(s)	296, 358, 458, 464, 709, 1082, 1151, 1183, 1300
BstNI	CCWGG	3 cut(s)	323, 358, 922
BstNSI	RCATGY	2 cut(s)	478, 877
BstPAI	GACNNNNGTC	1 cut(s)	1480
BstPI	GGTNACC	1 cut(s)	236
BstSCI	CCNGG	4 cut(s)	321, 356, 382, 920
BstSFI	CTRYAG	2 cut(s)	786, 1137
BstUI	CGCG	3 cut(s)	290, 299, 1177
BstV1I	GCAGC	9 cut(s)	215, 241, 810, 892, 1048, 1097, 1399, 1445, 1467
BstX2I	RGATCY	2 cut(s)	937, 1234
BstXI	CCANNNNNNTGG	1 cut(s)	106
BstYI	RGATCY	2 cut(s)	937, 1234
Bsu15I	ATCGAT	1 cut(s)	1044
BsuRI	GGCC	3 cut(s)	110, 356, 1294
BsuTUI	ATCGAT	1 cut(s)	1044
BtgI	CCRYGG	3 cut(s)	288, 1296, 1386
BtsCI	GGATG	1 cut(s)	686
BtsIMutI	CAGTG	1 cut(s)	960
BveI	ACCTGC	2 cut(s)	779, 1359
Cac8I	GCNNGC	4 cut(s)	354, 1078, 1090, 1292
CaiI	CAGNNNCTG	1 cut(s)	1351
CfoI	GCGC	2 cut(s)	33, 776
Cfr10I	RCCGGY	1 cut(s)	240
Cfr13I	GGNCC	2 cut(s)	1293, 1379
Cfr42I	CCGCGG	1 cut(s)	291
ClaI	ATCGAT	1 cut(s)	1044
CseI	GACGC	1 cut(s)	1380
Csp6I	GTAC	7 cut(s)	244, 271, 364, 931, 970, 1035, 1348
CspAI	ACCGGT	1 cut(s)	240
CspCI	CAANNNNNGTGG	2 cut(s)	508, 543
CviQI	GTAC	7 cut(s)	244, 271, 364, 931, 970, 1035, 1348
DdeI	CTNAG	1 cut(s)	145
DpnI	GATC	8 cut(s)	38, 484, 741, 939, 995, 1043, 1236, 1274
DpnII	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
DraIII	CACNNNGTG	2 cut(s)	124, 1151
DrdI	GACNNNNNNGTC	1 cut(s)	878
DseDI	GACNNNNNNGTC	1 cut(s)	878
EaeI	YGGCCR	2 cut(s)	108, 354
Eam1104I	CTCTTC	4 cut(s)	668, 1173, 1319, 1427
EarI	CTCTTC	4 cut(s)	668, 1173, 1319, 1427
EciI	GGCGGA	1 cut(s)	7
Ecl136II	GAGCTC	1 cut(s)	1258
Eco130I	CCWWGG	3 cut(s)	519, 1296, 1386
Eco24I	GRGCYC	1 cut(s)	1260
Eco31I	GGTCTC	1 cut(s)	757
Eco47I	GGWCC	1 cut(s)	1379
Eco47III	AGCGCT	1 cut(s)	32
Eco53kI	GAGCTC	1 cut(s)	1258
Eco88I	CYCGRG	1 cut(s)	1374
Eco91I	GGTNACC	1 cut(s)	236
EcoICRI	GAGCTC	1 cut(s)	1258
EcoNI	CCTNNNNNAGG	1 cut(s)	326
EcoO109I	RGGNCCY	1 cut(s)	1379
EcoO65I	GGTNACC	1 cut(s)	236
EcoRII	CCWGG	3 cut(s)	321, 356, 920
EcoT14I	CCWWGG	3 cut(s)	519, 1296, 1386
EcoT38I	GRGCYC	1 cut(s)	1260
ErhI	CCWWGG	3 cut(s)	519, 1296, 1386
Esp3I	CGTCTC	3 cut(s)	717, 1398, 1448
FalI	AAGNNNNNCTT	2 cut(s)	1100, 1132
FaqI	GGGAC	1 cut(s)	304
FokI	GGATG	1 cut(s)	693
FriOI	GRGCYC	1 cut(s)	1260
FspBI	CTAG	2 cut(s)	756, 1492
FspI	TGCGCA	1 cut(s)	775
GlaI	GCGC	2 cut(s)	32, 775
HaeII	RGCGCY	1 cut(s)	34
HaeIII	GGCC	3 cut(s)	110, 356, 1294
HapII	CCGG	4 cut(s)	241, 384, 423, 626
HgaI	GACGC	1 cut(s)	1380
HhaI	GCGC	2 cut(s)	33, 776
Hin1I	GRCGYC	1 cut(s)	1391
Hin6I	GCGC	2 cut(s)	31, 774
HinP1I	GCGC	2 cut(s)	31, 774
HindIII	AAGCTT	1 cut(s)	600
HinfI	GANTC	7 cut(s)	293, 332, 419, 658, 808, 816, 844
HpaII	CCGG	4 cut(s)	241, 384, 423, 626
HphI	GGTGA	8 cut(s)	34, 106, 248, 562, 742, 841, 1045, 1329
Hpy166II	GTNNAC	5 cut(s)	380, 508, 794, 951, 1037
Hpy188I	TCNGA	5 cut(s)	148, 858, 998, 1234, 1402
Hpy188III	TCNNGA	6 cut(s)	81, 175, 423, 565, 888, 1129
Hpy8I	GTNNAC	5 cut(s)	380, 508, 794, 951, 1037
Hpy99I	CGWCG	2 cut(s)	457, 599
HpyAV	CCTTC	7 cut(s)	20, 97, 163, 368, 1018, 1079, 1097
HpyCH4III	ACNGT	6 cut(s)	275, 584, 853, 955, 1141, 1435
HpyCH4IV	ACGT	2 cut(s)	246, 526
HpyCH4V	TGCA	9 cut(s)	788, 908, 1085, 1125, 1145, 1290, 1354, 1415, 1431
HpyF10VI	GCNNNNNNNGC	9 cut(s)	296, 358, 458, 464, 709, 1082, 1151, 1183, 1300
HpyF3I	CTNAG	1 cut(s)	145
HpySE526I	ACGT	2 cut(s)	246, 526
Hsp92I	GRCGYC	1 cut(s)	1391
HspAI	GCGC	2 cut(s)	31, 774
Kpn2I	TCCGGA	1 cut(s)	422
KspI	CCGCGG	1 cut(s)	291
Kzo9I	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
LmnI	GCTCC	1 cut(s)	425
Lsp1109I	GCAGC	9 cut(s)	215, 241, 810, 892, 1048, 1097, 1399, 1445, 1467
LweI	GCATC	3 cut(s)	671, 1134, 1238
MaeI	CTAG	2 cut(s)	756, 1492
MaeII	ACGT	2 cut(s)	246, 526
MaeIII	GTNAC	4 cut(s)	40, 112, 236, 1162
MalI	GATC	8 cut(s)	38, 484, 741, 939, 995, 1043, 1236, 1274
MbiI	CCGCTC	1 cut(s)	745
MboI	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
MboII	GAAGA	4 cut(s)	685, 1160, 1306, 1414
MflI	RGATCY	2 cut(s)	937, 1234
MhlI	GDGCHC	3 cut(s)	430, 1260, 1305
MlsI	TGGCCA	1 cut(s)	356
MluNI	TGGCCA	1 cut(s)	356
MlyI	GAGTC	4 cut(s)	287, 326, 428, 802
MmeI	TCCRAC	2 cut(s)	700, 1425
Mox20I	TGGCCA	1 cut(s)	356
MroI	TCCGGA	1 cut(s)	422
MroXI	GAANNNNTTC	2 cut(s)	9, 657
MscI	TGGCCA	1 cut(s)	356
MseI	TTAA	4 cut(s)	327, 699, 1281, 1365
MslI	CAYNNNNRTG	3 cut(s)	104, 666, 839
Msp20I	TGGCCA	1 cut(s)	356
MspA1I	CMGCKG	4 cut(s)	290, 905, 1458, 1480
MspCI	CTTAAG	2 cut(s)	698, 1280
MspI	CCGG	4 cut(s)	241, 384, 423, 626
MspR9I	CCNGG	4 cut(s)	323, 358, 384, 922
Mva1269I	GAATGC	2 cut(s)	834, 865
MvaI	CCWGG	3 cut(s)	323, 358, 922
MvnI	CGCG	3 cut(s)	290, 299, 1177
MwoI	GCNNNNNNNGC	9 cut(s)	296, 358, 458, 464, 709, 1082, 1151, 1183, 1300
NciI	CCSGG	1 cut(s)	384
NcoI	CCATGG	2 cut(s)	1296, 1386
NdeII	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
NlaIV	GGNNCC	2 cut(s)	466, 1236
NmeAIII	GCCGAG	1 cut(s)	204
NmuCI	GTSAC	3 cut(s)	40, 112, 236
NsbI	TGCGCA	1 cut(s)	775
NspI	RCATGY	2 cut(s)	478, 877
NspV	TTCGAA	1 cut(s)	838
OliI	CACNNNNGTG	1 cut(s)	104
PaeR7I	CTCGAG	1 cut(s)	1374
PciI	ACATGT	1 cut(s)	873
PcsI	WCGNNNNNNNCGW	2 cut(s)	192, 279
PctI	GAATGC	2 cut(s)	834, 865
PdmI	GAANNNNTTC	2 cut(s)	9, 657
PfeI	GAWTC	3 cut(s)	658, 816, 844
PinAI	ACCGGT	1 cut(s)	240
PleI	GAGTC	4 cut(s)	287, 326, 427, 802
PpsI	GAGTC	4 cut(s)	287, 326, 427, 802
Ppu21I	YACGTR	1 cut(s)	247
PpuMI	RGGWCCY	1 cut(s)	1379
PscI	ACATGT	1 cut(s)	873
PshAI	GACNNNNGTC	1 cut(s)	1480
Psp124BI	GAGCTC	1 cut(s)	1260
Psp5II	RGGWCCY	1 cut(s)	1379
Psp6I	CCWGG	3 cut(s)	321, 356, 920
PspEI	GGTNACC	1 cut(s)	236
PspGI	CCWGG	3 cut(s)	321, 356, 920
PspN4I	GGNNCC	2 cut(s)	466, 1236
PspPI	GGNCC	2 cut(s)	1293, 1379
PspPPI	RGGWCCY	1 cut(s)	1379
PspXI	VCTCGAGB	1 cut(s)	1374
PstI	CTGCAG	1 cut(s)	790
PstNI	CAGNNNCTG	1 cut(s)	1351
PsuI	RGATCY	2 cut(s)	937, 1234
PvuII	CAGCTG	2 cut(s)	905, 1458
RsaI	GTAC	7 cut(s)	245, 272, 365, 932, 971, 1036, 1349
RsaNI	GTAC	7 cut(s)	244, 271, 364, 931, 970, 1035, 1348
RseI	CAYNNNNRTG	3 cut(s)	104, 666, 839
SacI	GAGCTC	1 cut(s)	1260
SacII	CCGCGG	1 cut(s)	291
SaqAI	TTAA	4 cut(s)	327, 699, 1281, 1365
Sau3AI	GATC	8 cut(s)	36, 482, 739, 937, 993, 1041, 1234, 1272
Sau96I	GGNCC	2 cut(s)	1293, 1379
SchI	GAGTC	4 cut(s)	287, 326, 428, 802
ScrFI	CCNGG	4 cut(s)	323, 358, 384, 922
SduI	GDGCHC	3 cut(s)	430, 1260, 1305
SfaNI	GCATC	3 cut(s)	671, 1134, 1238
SfcI	CTRYAG	2 cut(s)	786, 1137
Sfr274I	CTCGAG	1 cut(s)	1374
Sfr303I	CCGCGG	1 cut(s)	291
SfuI	TTCGAA	1 cut(s)	838
SgrBI	CCGCGG	1 cut(s)	291
SinI	GGWCC	1 cut(s)	1379
SlaI	CTCGAG	1 cut(s)	1374
SmiMI	CAYNNNNRTG	3 cut(s)	104, 666, 839
SmlI	CTYRAG	4 cut(s)	698, 1259, 1280, 1374
SmoI	CTYRAG	4 cut(s)	698, 1259, 1280, 1374
SspMI	CTAG	2 cut(s)	756, 1492
SstI	GAGCTC	1 cut(s)	1260
StyD4I	CCNGG	4 cut(s)	321, 356, 382, 920
StyI	CCWWGG	3 cut(s)	519, 1296, 1386
TaaI	ACNGT	6 cut(s)	275, 584, 853, 955, 1141, 1435
TaiI	ACGT	2 cut(s)	249, 529
TaqI	TCGA	9 cut(s)	129, 282, 594, 838, 926, 1044, 1098, 1305, 1375
TaqII	GACCGA	1 cut(s)	739
TatI	WGTACW	3 cut(s)	363, 930, 1034
TauI	GCSGC	1 cut(s)	461
TfiI	GAWTC	3 cut(s)	658, 816, 844
Tru1I	TTAA	4 cut(s)	327, 699, 1281, 1365
Tru9I	TTAA	4 cut(s)	327, 699, 1281, 1365
TscAI	CASTG	1 cut(s)	960
TseFI	GTSAC	3 cut(s)	40, 112, 236
TseI	GCWGC	9 cut(s)	228, 254, 823, 905, 1061, 1085, 1412, 1455, 1458
Tsp45I	GTSAC	3 cut(s)	40, 112, 236
TspDTI	ATGAA	7 cut(s)	330, 386, 650, 857, 1061, 1062, 1306
TspGWI	ACGGA	3 cut(s)	386, 996, 1430
TspRI	CASTG	1 cut(s)	960
Vha464I	CTTAAG	2 cut(s)	698, 1280
VpaK11BI	GGWCC	1 cut(s)	1379
XagI	CCTNNNNNAGG	1 cut(s)	326
XceI	RCATGY	2 cut(s)	478, 877
XcmI	CCANNNNNNNNNTGG	1 cut(s)	103
XhoI	CTCGAG	1 cut(s)	1374
XmnI	GAANNNNTTC	2 cut(s)	9, 657
XspI	CTAG	2 cut(s)	756, 1492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.