FvH4_4g23150

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
25729532 .. 25730810
1279 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g23150.t1

Sequence Viewer

Length: 828 bp
ATGGAGAAGTACCAAACCCTAGAAATTGCTCAGAAAAACCCTAACTCCCCAGTCTTCTACCTCTACCTCAATCGCCCCAACCACCGTAACGCCCTATCACGCGCCTTCTTCACCGAATTCCCCAAAGCCCTCTCCTCCCTCGACCAAAACCCCGACGCCAACGTCATCATCCTCACCGGCGCCGGAGACCACTTCTGCGCCGGAATCGACCTCAACAACCTATCCTCGATCGCCGCGGAATCCGTCTCCGGAGACCGCGGCCGCGACGGTGAGAGGCTCCGGCGAGCGATCAAGCTCATGCAGGACGCCATCACCGCCATCGAGCGGTGCCGGAAGCCGGTGATCGCCGCCGTCCAAGGCGCGTGCATCGGCGGTGGGATCGATATTATCACCGCCTGTGACATAAGGTACTGCAGCAAGGACGCGTTCTTCTCGGTCAAAGAGGTTGACCTGGCCATCACCGCCGACCTTGGAACGCTGCAGCGGCTGCCCAGTATAGTCGGGTACGGCCACGCGCTTGAGCTGGCGTTAACGGGTCGGAGGTTCTCGGGTCAGGAGGCCAAGGAGCTGGGCCTGGTCTCTGGAGTATTCGGGTCGAAGCAGGAGCTGGAGAACGGCGTACGACTCGTCGCAGAGGGAATGGCTGCAAAGTCGCCGTTGGCAGTGACGGGGACGAAGGCGGTGTTGCAGAGGAGCAGGGAGATGAGTGTGGAGCAGGGATTGGACTACGTCGCCACGTGGAATTCGGCAATGCTGTTATCCGATGACTTAACGGAAGCGATTTCTGCTCACATGCAGAAAAGAAAGCCGGTGTTTGCCAAGCTCTGA

Protein Analysis

276

Amino Acids

29.82

Weight (kDa)

7.63

Isoelectric Point (pI)

37.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_1 PF00378 16 - 273 9.5e-50 Enoyl-CoA hydratase/isomerase
ECH_2 PF16113 21 - 200 9.4e-26 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015972)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43280
fragaria_vesca FvH4_4g23150
malus_domestica MD13G1124500.v1.1
prunus_persica Prupe.1G220600_v2.0.a1
pyrus_communis pycom13g10880
rosa_chinensis RchiOBHm_Chr4g0429491
rosa_laevigata RLG00000007066
rosa_multiflora Rmu_sc0003708.1_g000006
rosa_roxburghii Rroxscaffold_5G00371190
rosa_rugosa Rorug04G0236400
rosa_samantha Rh4AG292100 Rh4BG297900 Rh4CG313400 Rh4DG295000
rosa_wichuraiana Rw4G025300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 161
AccB1I GGYRCC 2 cut(s) 179, 327
AccBSI CCGCTC 1 cut(s) 325
AccII CGCG 7 cut(s) 102, 236, 258, 264, 362, 425, 515
AccIII TCCGGA 1 cut(s) 248
AclWI GGATC 1 cut(s) 386
AcoI YGGCCR 3 cut(s) 259, 453, 508
AcsI RAATTY 2 cut(s) 116, 742
AcvI CACGTG 1 cut(s) 738
AcyI GRCGYC 3 cut(s) 156, 180, 306
AfaI GTAC 4 cut(s) 11, 410, 506, 621
AfiI CCNNNNNNNGG 2 cut(s) 324, 337
AflIII ACRYGT 1 cut(s) 423
AjnI CCWGG 2 cut(s) 450, 573
AluBI AGCT 5 cut(s) 295, 523, 568, 607, 823
AluI AGCT 5 cut(s) 295, 523, 568, 607, 823
Alw26I GTCTC 4 cut(s) 180, 246, 250, 583
AlwI GGATC 1 cut(s) 386
AlwNI CAGNNNCTG 2 cut(s) 487, 607
Ama87I CYCGRG 1 cut(s) 547
Aor13HI TCCGGA 1 cut(s) 248
AoxI GGCC 5 cut(s) 259, 453, 508, 558, 571
ApeKI GCWGC 5 cut(s) 414, 478, 481, 487, 644
ApoI RAATTY 2 cut(s) 116, 742
AspLEI GCGC 5 cut(s) 104, 182, 200, 362, 517
AspS9I GGNCC 1 cut(s) 571
AsuHPI GGTGA 7 cut(s) 103, 166, 281, 304, 352, 382, 451
AvaI CYCGRG 1 cut(s) 547
BalI TGGCCA 1 cut(s) 455
BanI GGYRCC 2 cut(s) 179, 327
BbrPI CACGTG 1 cut(s) 738
BbsI GAAGAC 1 cut(s) 46
BbvI GCAGC 5 cut(s) 426, 465, 474, 493, 631
BccI CCATC 3 cut(s) 317, 326, 464
BceAI ACGGC 4 cut(s) 335, 523, 631, 640
BciT130I CCWGG 2 cut(s) 452, 575
BcoDI GTCTC 4 cut(s) 180, 246, 250, 583
BfaI CTAG 1 cut(s) 20
BfmI CTRYAG 2 cut(s) 412, 479
BfoI RGCGCY 1 cut(s) 183
Bme1390I CCNGG 2 cut(s) 452, 575
BmeT110I CYCGRG 1 cut(s) 547
BmgT120I GGNCC 1 cut(s) 571
BmiI GGNNCC 3 cut(s) 181, 278, 329
BmrFI CCNGG 2 cut(s) 452, 575
BmrI ACTGGG 2 cut(s) 44, 486
BmsI GCATC 1 cut(s) 375
BmuI ACTGGG 2 cut(s) 44, 486
BpiI GAAGAC 1 cut(s) 46
BpmI CTGGAG 2 cut(s) 603, 629
BpuEI CTTGAG 1 cut(s) 539
Bsa29I ATCGAT 1 cut(s) 381
BsaAI YACGTR 1 cut(s) 738
BsaHI GRCGYC 3 cut(s) 156, 180, 306
BsaI GGTCTC 3 cut(s) 180, 246, 583
BsaJI CCNNGG 5 cut(s) 234, 256, 355, 469, 561
BsaWI WCCGGW 1 cut(s) 248
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bsc4I CCNNNNNNNGG 2 cut(s) 324, 337
Bse118I RCCGGY 3 cut(s) 176, 337, 808
Bse1I ACTGG 2 cut(s) 50, 492
Bse3DI GCAATG 1 cut(s) 756
BseAI TCCGGA 1 cut(s) 248
BseBI CCWGG 2 cut(s) 452, 575
BseCI ATCGAT 1 cut(s) 381
BseDI CCNNGG 5 cut(s) 234, 256, 355, 469, 561
BseGI GGATG 1 cut(s) 168
BseLI CCNNNNNNNGG 2 cut(s) 324, 337
BseMI GCAATG 1 cut(s) 756
BseMII CTCAG 1 cut(s) 44
BseNI ACTGG 2 cut(s) 50, 492
BseRI GAGGAG 2 cut(s) 124, 706
BseX3I CGGCCG 1 cut(s) 259
BseXI GCAGC 5 cut(s) 426, 465, 474, 493, 631
BseYI CCCAGC 1 cut(s) 568
Bsh1236I CGCG 7 cut(s) 102, 236, 258, 264, 362, 425, 515
Bsh1285I CGRYCG 2 cut(s) 231, 262
BshFI GGCC 5 cut(s) 261, 455, 510, 560, 573
BshNI GGYRCC 2 cut(s) 179, 327
BshVI ATCGAT 1 cut(s) 381
BsiEI CGRYCG 2 cut(s) 231, 262
BsiHKCI CYCGRG 1 cut(s) 547
BsiSI CCGG 8 cut(s) 177, 183, 201, 249, 280, 331, 338, 809
BsiWI CGTACG 1 cut(s) 619
BslFI GGGAC 1 cut(s) 685
BslI CCNNNNNNNGG 2 cut(s) 324, 337
BsmAI GTCTC 4 cut(s) 180, 246, 250, 583
BsmBI CGTCTC 1 cut(s) 250
BsmFI GGGAC 1 cut(s) 685
BsnI GGCC 5 cut(s) 261, 455, 510, 560, 573
Bso31I GGTCTC 3 cut(s) 180, 246, 583
BsoBI CYCGRG 1 cut(s) 547
Bsp13I TCCGGA 1 cut(s) 248
Bsp143I GATC 4 cut(s) 228, 288, 342, 378
BspANI GGCC 5 cut(s) 261, 455, 510, 560, 573
BspCNI CTCAG 1 cut(s) 43
BspDI ATCGAT 1 cut(s) 381
BspEI TCCGGA 1 cut(s) 248
BspFNI CGCG 7 cut(s) 102, 236, 258, 264, 362, 425, 515
BspLI GGNNCC 3 cut(s) 181, 278, 329
BspMAI CTGCAG 2 cut(s) 416, 483
BspPI GGATC 1 cut(s) 386
BspT107I GGYRCC 2 cut(s) 179, 327
BspTNI GGTCTC 3 cut(s) 180, 246, 583
BsrBI CCGCTC 1 cut(s) 325
BsrDI GCAATG 1 cut(s) 756
BsrFI RCCGGY 3 cut(s) 176, 337, 808
BsrI ACTGG 2 cut(s) 50, 492
BssAI RCCGGY 3 cut(s) 176, 337, 808
BssECI CCNNGG 5 cut(s) 234, 256, 355, 469, 561
BssMI GATC 4 cut(s) 228, 288, 342, 378
BssNI GRCGYC 3 cut(s) 156, 180, 306
BssT1I CCWWGG 3 cut(s) 355, 469, 561
Bst2UI CCWGG 2 cut(s) 452, 575
Bst4CI ACNGT 2 cut(s) 86, 269
BstACI GRCGYC 3 cut(s) 156, 180, 306
BstAPI GCANNNNNTGC 1 cut(s) 487
BstBAI YACGTR 1 cut(s) 738
BstC8I GCNNGC 3 cut(s) 285, 364, 525
BstDEI CTNAG 1 cut(s) 30
BstDSI CCRYGG 2 cut(s) 234, 256
BstF5I GGATG 1 cut(s) 168
BstFNI CGCG 7 cut(s) 102, 236, 258, 264, 362, 425, 515
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 5 cut(s) 104, 182, 200, 362, 517
BstKTI GATC 4 cut(s) 231, 291, 345, 381
BstMAI GTCTC 4 cut(s) 180, 246, 250, 583
BstMBI GATC 4 cut(s) 228, 288, 342, 378
BstMCI CGRYCG 2 cut(s) 231, 262
BstMWI GCNNNNNNNGC 5 cut(s) 314, 461, 484, 487, 785
BstNI CCWGG 2 cut(s) 452, 575
BstNSI RCATGY 1 cut(s) 796
BstSCI CCNGG 2 cut(s) 450, 573
BstSFI CTRYAG 2 cut(s) 412, 479
BstUI CGCG 7 cut(s) 102, 236, 258, 264, 362, 425, 515
BstV1I GCAGC 5 cut(s) 426, 465, 474, 493, 631
BstV2I GAAGAC 1 cut(s) 46
BstXI CCANNNNNNTGG 1 cut(s) 568
BstZI CGGCCG 1 cut(s) 259
Bsu15I ATCGAT 1 cut(s) 381
BsuRI GGCC 5 cut(s) 261, 455, 510, 560, 573
BsuTUI ATCGAT 1 cut(s) 381
BtgI CCRYGG 2 cut(s) 234, 256
BtsCI GGATG 1 cut(s) 168
BtsI GCAGTG 1 cut(s) 669
BtsIMutI CAGTG 1 cut(s) 669
Cac8I GCNNGC 3 cut(s) 285, 364, 525
CaiI CAGNNNCTG 2 cut(s) 487, 607
CciNI GCGGCCGC 1 cut(s) 259
CfoI GCGC 5 cut(s) 104, 182, 200, 362, 517
Cfr10I RCCGGY 3 cut(s) 176, 337, 808
Cfr13I GGNCC 1 cut(s) 571
Cfr42I CCGCGG 2 cut(s) 237, 259
ClaI ATCGAT 1 cut(s) 381
CseI GACGC 3 cut(s) 164, 314, 431
Csp6I GTAC 4 cut(s) 10, 409, 505, 620
CviAII CATG 2 cut(s) 298, 793
CviQI GTAC 4 cut(s) 10, 409, 505, 620
DdeI CTNAG 1 cut(s) 30
DinI GGCGCC 1 cut(s) 181
DpnI GATC 4 cut(s) 230, 290, 344, 380
DpnII GATC 4 cut(s) 228, 288, 342, 378
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
EaeI YGGCCR 3 cut(s) 259, 453, 508
EagI CGGCCG 1 cut(s) 259
EclXI CGGCCG 1 cut(s) 259
Eco130I CCWWGG 3 cut(s) 355, 469, 561
Eco31I GGTCTC 3 cut(s) 180, 246, 583
Eco52I CGGCCG 1 cut(s) 259
Eco72I CACGTG 1 cut(s) 738
Eco88I CYCGRG 1 cut(s) 547
EcoRI GAATTC 2 cut(s) 116, 742
EcoRII CCWGG 2 cut(s) 450, 573
EcoT14I CCWWGG 3 cut(s) 355, 469, 561
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
ErhI CCWWGG 3 cut(s) 355, 469, 561
Esp3I CGTCTC 1 cut(s) 250
FaeI CATG 2 cut(s) 301, 796
FaiI YATR 4 cut(s) 299, 404, 497, 794
FaqI GGGAC 1 cut(s) 685
FatI CATG 2 cut(s) 297, 792
FokI GGATG 1 cut(s) 155
FspBI CTAG 1 cut(s) 20
GlaI GCGC 5 cut(s) 103, 181, 199, 361, 516
GsaI CCCAGC 1 cut(s) 572
GsuI CTGGAG 2 cut(s) 603, 629
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 5 cut(s) 261, 455, 510, 560, 573
HapII CCGG 8 cut(s) 177, 183, 201, 249, 280, 331, 338, 809
HgaI GACGC 3 cut(s) 164, 314, 431
HhaI GCGC 5 cut(s) 104, 182, 200, 362, 517
Hin1I GRCGYC 3 cut(s) 156, 180, 306
Hin1II CATG 2 cut(s) 301, 796
Hin6I GCGC 5 cut(s) 102, 180, 198, 360, 515
HinP1I GCGC 5 cut(s) 102, 180, 198, 360, 515
HincII GTYRAC 2 cut(s) 448, 531
HindII GTYRAC 2 cut(s) 448, 531
HinfI GANTC 3 cut(s) 204, 239, 624
HpaI GTTAAC 1 cut(s) 531
HpaII CCGG 8 cut(s) 177, 183, 201, 249, 280, 331, 338, 809
HphI GGTGA 7 cut(s) 103, 166, 281, 304, 352, 382, 451
Hpy166II GTNNAC 2 cut(s) 448, 531
Hpy188I TCNGA 4 cut(s) 33, 540, 763, 827
Hpy188III TCNNGA 3 cut(s) 249, 554, 582
Hpy8I GTNNAC 2 cut(s) 448, 531
Hpy99I CGWCG 4 cut(s) 158, 269, 632, 734
HpyAV CCTTC 2 cut(s) 115, 670
HpyCH4III ACNGT 2 cut(s) 86, 269
HpyCH4IV ACGT 3 cut(s) 162, 729, 737
HpyCH4V TGCA 7 cut(s) 301, 366, 414, 481, 647, 688, 796
HpyF10VI GCNNNNNNNGC 5 cut(s) 314, 461, 484, 487, 785
HpyF3I CTNAG 1 cut(s) 30
HpySE526I ACGT 3 cut(s) 162, 729, 737
Hsp92I GRCGYC 3 cut(s) 156, 180, 306
Hsp92II CATG 2 cut(s) 301, 796
HspAI GCGC 5 cut(s) 102, 180, 198, 360, 515
KasI GGCGCC 1 cut(s) 179
Kpn2I TCCGGA 1 cut(s) 248
KspAI GTTAAC 1 cut(s) 531
KspI CCGCGG 2 cut(s) 237, 259
Kzo9I GATC 4 cut(s) 228, 288, 342, 378
LmnI GCTCC 5 cut(s) 282, 565, 604, 693, 712
Lsp1109I GCAGC 5 cut(s) 426, 465, 474, 493, 631
LweI GCATC 1 cut(s) 375
MaeI CTAG 1 cut(s) 20
MaeII ACGT 3 cut(s) 162, 729, 737
MaeIII GTNAC 3 cut(s) 86, 398, 664
MalI GATC 4 cut(s) 230, 290, 344, 380
MbiI CCGCTC 1 cut(s) 325
MboI GATC 4 cut(s) 228, 288, 342, 378
MboII GAAGA 3 cut(s) 46, 100, 421
MlsI TGGCCA 1 cut(s) 455
MluCI AATT 3 cut(s) 24, 116, 742
MluI ACGCGT 1 cut(s) 423
MluNI TGGCCA 1 cut(s) 455
Mly113I GGCGCC 1 cut(s) 180
MlyI GAGTC 1 cut(s) 618
MmeI TCCRAC 1 cut(s) 518
Mox20I TGGCCA 1 cut(s) 455
MroI TCCGGA 1 cut(s) 248
MscI TGGCCA 1 cut(s) 455
MseI TTAA 2 cut(s) 530, 770
Msp20I TGGCCA 1 cut(s) 455
MspA1I CMGCKG 3 cut(s) 236, 258, 484
MspI CCGG 8 cut(s) 177, 183, 201, 249, 280, 331, 338, 809
MspR9I CCNGG 2 cut(s) 452, 575
MvaI CCWGG 2 cut(s) 452, 575
MvnI CGCG 7 cut(s) 102, 236, 258, 264, 362, 425, 515
MwoI GCNNNNNNNGC 5 cut(s) 314, 461, 484, 487, 785
NarI GGCGCC 1 cut(s) 180
NdeII GATC 4 cut(s) 228, 288, 342, 378
NlaIII CATG 2 cut(s) 301, 796
NlaIV GGNNCC 3 cut(s) 181, 278, 329
NmuCI GTSAC 2 cut(s) 398, 664
NotI GCGGCCGC 1 cut(s) 259
NspI RCATGY 1 cut(s) 796
PfeI GAWTC 2 cut(s) 204, 239
Pfl23II CGTACG 1 cut(s) 619
PflFI GACNNNGTC 1 cut(s) 728
Ple19I CGATCG 1 cut(s) 231
PleI GAGTC 1 cut(s) 618
PluTI GGCGCC 1 cut(s) 183
PmaCI CACGTG 1 cut(s) 738
PmlI CACGTG 1 cut(s) 738
PpsI GAGTC 1 cut(s) 618
Ppu21I YACGTR 1 cut(s) 738
Psp6I CCWGG 2 cut(s) 450, 573
PspCI CACGTG 1 cut(s) 738
PspFI CCCAGC 1 cut(s) 568
PspGI CCWGG 2 cut(s) 450, 573
PspLI CGTACG 1 cut(s) 619
PspN4I GGNNCC 3 cut(s) 181, 278, 329
PspPI GGNCC 1 cut(s) 571
PstI CTGCAG 2 cut(s) 416, 483
PstNI CAGNNNCTG 2 cut(s) 487, 607
PsyI GACNNNGTC 1 cut(s) 728
PvuI CGATCG 1 cut(s) 231
RsaI GTAC 4 cut(s) 11, 410, 506, 621
RsaNI GTAC 4 cut(s) 10, 409, 505, 620
SacII CCGCGG 2 cut(s) 237, 259
SaqAI TTAA 2 cut(s) 530, 770
Sau3AI GATC 4 cut(s) 228, 288, 342, 378
Sau96I GGNCC 1 cut(s) 571
SchI GAGTC 1 cut(s) 618
ScrFI CCNGG 2 cut(s) 452, 575
SfaNI GCATC 1 cut(s) 375
SfcI CTRYAG 2 cut(s) 412, 479
SfoI GGCGCC 1 cut(s) 181
Sfr303I CCGCGG 2 cut(s) 237, 259
SgrAI CRCCGGYG 1 cut(s) 176
SgrBI CCGCGG 2 cut(s) 237, 259
SmlI CTYRAG 1 cut(s) 518
SmoI CTYRAG 1 cut(s) 518
Sse9I AATT 3 cut(s) 24, 116, 742
SspDI GGCGCC 1 cut(s) 179
SspMI CTAG 1 cut(s) 20
StyD4I CCNGG 2 cut(s) 450, 573
StyI CCWWGG 3 cut(s) 355, 469, 561
TaaI ACNGT 2 cut(s) 86, 269
TaiI ACGT 3 cut(s) 165, 732, 740
TaqI TCGA 6 cut(s) 141, 207, 227, 321, 381, 596
TaqII GACCGA 1 cut(s) 424
TasI AATT 3 cut(s) 24, 116, 742
TauI GCSGC 5 cut(s) 236, 261, 264, 350, 487
TfiI GAWTC 2 cut(s) 204, 239
Tru1I TTAA 2 cut(s) 530, 770
Tru9I TTAA 2 cut(s) 530, 770
TscAI CASTG 1 cut(s) 669
TseFI GTSAC 2 cut(s) 398, 664
TseI GCWGC 5 cut(s) 414, 478, 481, 487, 644
Tsp45I GTSAC 2 cut(s) 398, 664
TspGWI ACGGA 2 cut(s) 232, 788
TspRI CASTG 1 cut(s) 669
Tth111I GACNNNGTC 1 cut(s) 728
XapI RAATTY 2 cut(s) 116, 742
XceI RCATGY 1 cut(s) 796
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.