Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0010217

Physical Location & Seq

Genomic Coordinates Reverse (-)

26267137 .. 26274870

Gene Structure 7734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g23960.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2538 bp

ATGTCAGGACCTGGAAAACGAAGCAATTTCCGGAGCCGAGTCAAACCCTTCAAGCACCTTGACGACGACGTTTCACTCCGCCGTCGTATCCCCAATCGCCGCCCCCGAAACGACAGCTCGATCAGAATCTTCAACGTCGATCTCAAAATCGCGCTAGGGCTCAGCGTCGTCGCCTTCTTCTTCGTTTTGTTTCTGATCTATAACCTCATCAATCATATTCCTCAAGCTCAGATACCTAGAGTCGTCACGCCGCTCCCTGCTCCCAAGCTCATGGACCTCCCTCAGTTTCAAGGCGAGCACAAGGAGAGCTTGTATTGGGGGACGTACCGGCCTCATGCTTATCTCGGAATCCGAGCTAGGACTCCTCGGTCTTTGATCGGGGGATTGATGTGGCTAGGTGTACAGGATGGGAGATATTCCCTGCGACATTTCTGCCAGGATTCTGATGGCCTTAGCCAATACGGGTGGACAGATCATGATGGGCGCAACTACGGACATCAAATGATTGTTGACCAGGAAATGGAGCTGGCAACTAGTTTCTTGAAGTCAAAGGGGGAAGATAGTGGTTATGGGGGCGATTGGGCAGTTCGACTTAATGTACAAAACCACAAATCTAATGCAAATGAGGAACTTTCAAGAAGTGCACATCTCTTTTTCTATTTGGCTGATGAAGATGGAAATGCTCTAACTGTAGGTGAAGACACATTGGGAACGTCTGAGAATTCCCTCCTTGCATCTGGTTCTCATATGGACATTGGAAATTGGCAGCTGCATCTGAAGTCAGAAGATGATTTGGAAATTCATTATTCTGGTTTCAAGACACCTCATATTCACAACTTATCTGATCTTGTCCAGGAAAATCTTGGACTACAAATAAGGAAATTTAATCGATTGCAGCTACCTGACTCATCTGATGATTATCCAAGTATTCTGGTTTTCCAGATCTCGGCTAAGATTCCCTTCAAGGCGGATATCACATTAATATCTGGAACTGGTTTGGAAAGTTCAAGAGTACAGAAGCGTATCAGCAGCCTTACAGGTACTTCGCTAACCAGTCAACTGAAAGAGAAGCAAAGAGAGTTTGATTCAAAGTTTGAGAAGACCTTTAATTTAGATAACAAGGTTGATTCTGAATCTATTATTGCCGGTAAGGCTGCTATTGGAAACTTGTTGGGTGGCATCGGCTATTTCTTTGGCCAGTCAAAAATTGCTCTCCCCAAGGATTTGAATCTGGCAAGTCAGGATAATTCTATTTTATATTGGCCTGCTGAGCTTTACACAGCAGTTCCAAGTCGACCCTTCTTTCCAAGAGGATTTTTGTGGGATGAAGGTTTTCATCAGCTCTTGATTCGGCGGTGGGATACACGCATTTCCTTGGACATCGTAGGGCACTGGTTAGATCTAATGAATATTGATGGATGGATTCCACGTGAGCAAATTTTAGGAGCTGAAGCTCTCAGTAAAGTCCCCAAGGAGTTTGTTGCTCAACTTCCATCAAATGGAAATCCGCCAACTCTATTTTTAGTGTTACGAGAACTTCTTCATGGATTAAAGAAAAATAAGTTTACCGCTGCTGAAAGCAACGACATCTCTTCATTCCTAAAACAGGCCTATGTTCGCCTAGAAGCATGGTTTCAGTGGTTCAACACTACACAGTCAGGAAAAGAAATAGGCACCTACTACTGGCATGGGAGAGACCACACAACAACGCGGCAACTAAATCCACAGACGCTGTCTTCTGGGTTTGATGATTATCCTCGTGCTTCTCACCCAAGTGAGGATGAACGTCACATAGATCTTAGATGCTGGATGCTTCTTGCAGCTGATTGCATGCATTCCATTTCAGAGCTTTTTGAGGAAAATAATTTTGGAAAGGAATATGATACTACGGTTAAGTTTCTCTCTGATTTTGAAATTCTGAACCAGATGCACTATGACAATGCGTATGGAGCATATTTTGATTTCGGAAATCATACAGAAAAGGTTCGTCTAAGGTGGAAAGAAACGATTGTGGGAAACAATTATCCAACTCGAGAGCTTTTAAGGGAAGTACTGGAGACCCCCAAGCTGAGACTGGTTCCTCATATTGGTTATGTTAGTCTATTCCCCTTCATGGGAAGGATTATTCCAGCTGATTCGTGGATTCTGGAAAAACAGCTGGATCTTATATCAAACCGCAGTATCTTGTGGACGGATTTTGGATTGCGTTCTCTTGCTAAAACAAGCTCGATCTATATGAAACACAACACAGAGCATGATGCTCCTTATTGGAGGGGTCCAATATGGATGAACATGAATTACATGATTCTTTCATCACTCAATCATTACTCCAGAGAGGATGGGCCATATAAAGACAAGGCAAAAACCATCTATGGAGACCTGAGAGGCAATTTGATTAGAAATGTGGTTCGGAATTACCACAAAACTGGGTTCTTCTGGGAACAGTATGACCAGAGAAATGGCAAAGGTAAAGGTGCACGTGTATTTACTGGTTGGACATCTCTCGTCCTGTTAATCATGGCAGAAGCTTACCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004573 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016787 GO:0016798 GO:0019538 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0070085 GO:0071704 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

Glyco_hydro_63 Glyco_hydro_63N

Protein Analysis

846

Amino Acids

97.08

Weight (kDa)

7.2

Isoelectric Point (pI)

45.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_63N	PF16923	103 - 264	1.7e-42	Glycosyl hydrolase family 63 N-terminal domain
Glyco_hydro_63	PF03200	346 - 835	2.6e-218	Glycosyl hydrolase family 63 C-terminal domain
MGH1-like_GH	PF22422	439 - 823	2e-16	Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67490 AT1G67490
fragaria_vesca	FvH4_4g23960 FvH4_4g23960
malus_domestica	MD13G1116700.v1.1 MD16G1117400.v1.1
prunus_persica	Prupe.1G228800_v2.0.a1
pyrus_communis	pycom13g10130 pycom16g10060
rosa_chinensis	RchiOBHm_Chr4g0430631
rosa_laevigata	RLG00000006961
rosa_multiflora	Rmu_sc0000131.1_g000015 Rmu_sc0005117.1_g000005 Rmu_sc0006863.1_g000002
rosa_roxburghii	Rroxscaffold_5G00372380
rosa_rugosa	Rorug04G0244900
rosa_samantha	Rh4AG300900 Rh4BG308000 Rh4CG325100 Rh4DG305600
rosa_wichuraiana	Rw4G026110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	367
AccB1I	GGYRCC	1 cut(s)	1673
AccB7I	CCANNNNNTGG	2 cut(s)	520, 1499
AccBSI	CCGCTC	1 cut(s)	253
AccI	GTMKAC	1 cut(s)	1294
AccII	CGCG	2 cut(s)	152, 1711
AccIII	TCCGGA	1 cut(s)	30
AciI	CCGC	9 cut(s)	79, 100, 251, 968, 1354, 1508, 1569, 1711, 2176
AclWI	GGATC	1 cut(s)	2169
AcoI	YGGCCR	1 cut(s)	1195
AcsI	RAATTY	5 cut(s)	721, 798, 881, 1437, 1914
AcuI	CTGAAG	2 cut(s)	797, 1470
AcvI	CACGTG	2 cut(s)	1430, 2480
AfaI	GTAC	6 cut(s)	326, 402, 600, 1014, 1042, 2052
AfiI	CCNNNNNNNGG	9 cut(s)	520, 946, 1499, 1606, 1683, 1777, 2087, 2113, 2114
AflIII	ACRYGT	1 cut(s)	2479
AhlI	ACTAGT	1 cut(s)	533
AjnI	CCWGG	4 cut(s)	10, 435, 513, 852
AjuI	GAANNNNNNNTTGG	2 cut(s)	1851, 1883
AleI	CACNNNNGTG	1 cut(s)	1773
Alw21I	GWGCWC	3 cut(s)	300, 646, 2479
Alw26I	GTCTC	4 cut(s)	1689, 2051, 2065, 2370
Alw44I	GTGCAC	2 cut(s)	642, 2475
AlwI	GGATC	1 cut(s)	2169
AlwNI	CAGNNNCTG	2 cut(s)	11, 1732
Ama87I	CYCGRG	1 cut(s)	2031
Aor13HI	TCCGGA	1 cut(s)	30
AoxI	GGCC	6 cut(s)	329, 448, 1195, 1262, 1608, 2342
ApaLI	GTGCAC	2 cut(s)	642, 2475
ApeKI	GCWGC	7 cut(s)	766, 769, 895, 1029, 1154, 1571, 1820
ApoI	RAATTY	5 cut(s)	721, 798, 881, 1437, 1914
AseI	ATTAAT	1 cut(s)	980
Asp700I	GAANNNNTTC	3 cut(s)	1332, 1539, 1983
AspLEI	GCGC	2 cut(s)	154, 486
AspS9I	GGNCC	4 cut(s)	8, 274, 2276, 2342
AsuHPI	GGTGA	2 cut(s)	707, 1760
AvaI	CYCGRG	1 cut(s)	2031
AvaII	GGWCC	3 cut(s)	8, 274, 2276
BaeGI	GKGCMC	3 cut(s)	646, 1392, 2479
BaeI	ACNNNNGTAYC	4 cut(s)	1875, 1908, 2164, 2197
BalI	TGGCCA	1 cut(s)	1197
BanI	GGYRCC	1 cut(s)	1673
BanII	GRGCYC	1 cut(s)	162
BauI	CACGAG	1 cut(s)	1758
BbrPI	CACGTG	2 cut(s)	1430, 2480
BbsI	GAAGAC	3 cut(s)	705, 1106, 1728
Bbv12I	GWGCWC	3 cut(s)	300, 646, 2479
BbvI	GCAGC	7 cut(s)	756, 778, 907, 1041, 1141, 1558, 1832
BccI	CCATC	9 cut(s)	401, 440, 473, 668, 1409, 1413, 1501, 2333, 2375
BceAI	ACGGC	1 cut(s)	66
BcgI	CGANNNNNNTGC	2 cut(s)	414, 448
BciT130I	CCWGG	4 cut(s)	12, 437, 515, 854
BciVI	GTATCC	2 cut(s)	98, 1354
BcoDI	GTCTC	4 cut(s)	1689, 2051, 2065, 2370
BcuI	ACTAGT	1 cut(s)	533
BfaI	CTAG	6 cut(s)	155, 237, 357, 395, 534, 1622
BfmI	CTRYAG	1 cut(s)	690
BfuI	GTATCC	2 cut(s)	98, 1354
BglI	GCCNNNNNGGC	1 cut(s)	1151
BglII	AGATCT	3 cut(s)	942, 1399, 1795
BlpI	GCTNAGC	2 cut(s)	161, 1269
BmcAI	AGTACT	1 cut(s)	2052
Bme1390I	CCNGG	4 cut(s)	12, 437, 515, 854
Bme18I	GGWCC	3 cut(s)	8, 274, 2276
BmeT110I	CYCGRG	1 cut(s)	2031
BmgT120I	GGNCC	4 cut(s)	8, 274, 2276, 2342
BmiI	GGNNCC	4 cut(s)	35, 1675, 2079, 2277
BmrFI	CCNGG	4 cut(s)	12, 437, 515, 854
BmrI	ACTGGG	1 cut(s)	2436
BmsI	GCATC	7 cut(s)	743, 781, 1188, 1793, 1800, 1917, 2248
BmuI	ACTGGG	1 cut(s)	2436
BpiI	GAAGAC	3 cut(s)	705, 1106, 1728
BpmI	CTGGAG	2 cut(s)	2075, 2314
Bpu10I	CCTNAGC	1 cut(s)	452
Bpu1102I	GCTNAGC	2 cut(s)	161, 1269
BpuEI	CTTGAG	1 cut(s)	207
Bsa29I	ATCGAT	1 cut(s)	889
BsaAI	YACGTR	2 cut(s)	1430, 2480
BsaBI	GATNNNNATC	4 cut(s)	125, 918, 1227, 1752
BsaI	GGTCTC	3 cut(s)	1689, 2051, 2370
BsaJI	CCNNGG	4 cut(s)	365, 1218, 1374, 1470
BsaWI	WCCGGW	1 cut(s)	30
BsaXI	ACNNNNNCTCC	2 cut(s)	296, 326
Bsc4I	CCNNNNNNNGG	9 cut(s)	520, 946, 1499, 1606, 1683, 1777, 2087, 2113, 2114
Bse118I	RCCGGY	2 cut(s)	327, 1145
Bse1I	ACTGG	9 cut(s)	997, 1053, 1198, 1397, 1688, 2058, 2079, 2431, 2494
Bse8I	GATNNNNATC	4 cut(s)	125, 918, 1227, 1752
BseAI	TCCGGA	1 cut(s)	30
BseBI	CCWGG	4 cut(s)	12, 437, 515, 854
BseCI	ATCGAT	1 cut(s)	889
BseDI	CCNNGG	4 cut(s)	365, 1218, 1374, 1470
BseGI	GGATG	7 cut(s)	412, 1330, 1424, 1786, 1815, 2292, 2344
BseJI	GATNNNNATC	4 cut(s)	125, 918, 1227, 1752
BseLI	CCNNNNNNNGG	9 cut(s)	520, 946, 1499, 1606, 1683, 1777, 2087, 2113, 2114
BseMII	CTCAG	8 cut(s)	175, 242, 296, 708, 1260, 1471, 2060, 2372
BseNI	ACTGG	9 cut(s)	997, 1053, 1198, 1397, 1688, 2058, 2079, 2431, 2494
BseRI	GAGGAG	1 cut(s)	354
BseSI	GKGCMC	3 cut(s)	646, 1392, 2479
BseXI	GCAGC	7 cut(s)	756, 778, 907, 1041, 1141, 1558, 1832
Bsh1236I	CGCG	2 cut(s)	152, 1711
BshFI	GGCC	6 cut(s)	331, 450, 1197, 1264, 1610, 2344
BshNI	GGYRCC	1 cut(s)	1673
BshVI	ATCGAT	1 cut(s)	889
BsiHKAI	GWGCWC	3 cut(s)	300, 646, 2479
BsiHKCI	CYCGRG	1 cut(s)	2031
BsiSI	CCGG	3 cut(s)	31, 328, 1146
BslFI	GGGAC	2 cut(s)	334, 1451
BslI	CCNNNNNNNGG	9 cut(s)	520, 946, 1499, 1606, 1683, 1777, 2087, 2113, 2114
BsmAI	GTCTC	4 cut(s)	1689, 2051, 2065, 2370
BsmFI	GGGAC	2 cut(s)	334, 1451
BsmI	GAATGC	1 cut(s)	1834
BsnI	GGCC	6 cut(s)	331, 450, 1197, 1264, 1610, 2344
Bso31I	GGTCTC	3 cut(s)	1689, 2051, 2370
BsoBI	CYCGRG	1 cut(s)	2031
Bsp1286I	GDGCHC	5 cut(s)	162, 300, 646, 1392, 2479
Bsp13I	TCCGGA	1 cut(s)	30
Bsp1407I	TGTACA	2 cut(s)	400, 598
Bsp1720I	GCTNAGC	2 cut(s)	161, 1269
BspACI	CCGC	9 cut(s)	79, 100, 251, 968, 1354, 1508, 1569, 1711, 2176
BspANI	GGCC	6 cut(s)	331, 450, 1197, 1264, 1610, 2344
BspCNI	CTCAG	8 cut(s)	174, 241, 295, 709, 1261, 1470, 2061, 2373
BspDI	ATCGAT	1 cut(s)	889
BspEI	TCCGGA	1 cut(s)	30
BspFNI	CGCG	2 cut(s)	152, 1711
BspHI	TCATGA	1 cut(s)	475
BspLI	GGNNCC	4 cut(s)	35, 1675, 2079, 2277
BspPI	GGATC	1 cut(s)	2169
BspT107I	GGYRCC	1 cut(s)	1673
BspTNI	GGTCTC	3 cut(s)	1689, 2051, 2370
BsrBI	CCGCTC	1 cut(s)	253
BsrFI	RCCGGY	2 cut(s)	327, 1145
BsrGI	TGTACA	2 cut(s)	400, 598
BsrI	ACTGG	9 cut(s)	997, 1053, 1198, 1397, 1688, 2058, 2079, 2431, 2494
BssAI	RCCGGY	2 cut(s)	327, 1145
BssECI	CCNNGG	4 cut(s)	365, 1218, 1374, 1470
BssSI	CACGAG	1 cut(s)	1758
BssT1I	CCWWGG	3 cut(s)	1218, 1374, 1470
Bst2BI	CACGAG	1 cut(s)	1758
Bst2UI	CCWGG	4 cut(s)	12, 437, 515, 854
Bst4CI	ACNGT	4 cut(s)	691, 1656, 1891, 2445
Bst6I	CTCTTC	1 cut(s)	1597
BstAUI	TGTACA	2 cut(s)	400, 598
BstBAI	YACGTR	2 cut(s)	1430, 2480
BstC8I	GCNNGC	4 cut(s)	296, 528, 1266, 1832
BstENI	CCTNNNNNAGG	1 cut(s)	1604
BstF5I	GGATG	7 cut(s)	412, 1330, 1424, 1786, 1815, 2292, 2344
BstFNI	CGCG	2 cut(s)	152, 1711
BstHHI	GCGC	2 cut(s)	154, 486
BstMAI	GTCTC	4 cut(s)	1689, 2051, 2065, 2370
BstMWI	GCNNNNNNNGC	3 cut(s)	1151, 1270, 1949
BstNI	CCWGG	4 cut(s)	12, 437, 515, 854
BstNSI	RCATGY	1 cut(s)	1834
BstSCI	CCNGG	4 cut(s)	10, 435, 513, 852
BstSFI	CTRYAG	1 cut(s)	690
BstSLI	GKGCMC	3 cut(s)	646, 1392, 2479
BstUI	CGCG	2 cut(s)	152, 1711
BstV1I	GCAGC	7 cut(s)	756, 778, 907, 1041, 1141, 1558, 1832
BstV2I	GAAGAC	3 cut(s)	705, 1106, 1728
BstX2I	RGATCY	4 cut(s)	942, 1399, 1795, 2161
BstXI	CCANNNNNNTGG	3 cut(s)	271, 2426, 2459
BstYI	RGATCY	4 cut(s)	942, 1399, 1795, 2161
Bsu15I	ATCGAT	1 cut(s)	889
BsuI	GTATCC	2 cut(s)	98, 1354
BsuRI	GGCC	6 cut(s)	331, 450, 1197, 1264, 1610, 2344
BsuTUI	ATCGAT	1 cut(s)	889
BtsCI	GGATG	7 cut(s)	412, 1330, 1424, 1786, 1815, 2292, 2344
BtsIMutI	CAGTG	2 cut(s)	1390, 1643
Cac8I	GCNNGC	4 cut(s)	296, 528, 1266, 1832
CaiI	CAGNNNCTG	2 cut(s)	11, 1732
CciI	TCATGA	1 cut(s)	475
CfoI	GCGC	2 cut(s)	154, 486
Cfr10I	RCCGGY	2 cut(s)	327, 1145
Cfr13I	GGNCC	4 cut(s)	8, 274, 2276, 2342
ClaI	ATCGAT	1 cut(s)	889
CseI	GACGC	2 cut(s)	154, 1738
Csp6I	GTAC	6 cut(s)	325, 401, 599, 1013, 1041, 2051
CspCI	CAANNNNNGTGG	2 cut(s)	446, 481
CviQI	GTAC	6 cut(s)	325, 401, 599, 1013, 1041, 2051
DrdI	GACNNNNNNGTC	1 cut(s)	367
DseDI	GACNNNNNNGTC	1 cut(s)	367
EaeI	YGGCCR	1 cut(s)	1195
Eam1104I	CTCTTC	1 cut(s)	1597
EarI	CTCTTC	1 cut(s)	1597
EciI	GGCGGA	3 cut(s)	68, 983, 1497
Eco130I	CCWWGG	3 cut(s)	1218, 1374, 1470
Eco147I	AGGCCT	1 cut(s)	1610
Eco24I	GRGCYC	1 cut(s)	162
Eco31I	GGTCTC	3 cut(s)	1689, 2051, 2370
Eco32I	GATATC	1 cut(s)	973
Eco47I	GGWCC	3 cut(s)	8, 274, 2276
Eco57I	CTGAAG	2 cut(s)	797, 1470
Eco72I	CACGTG	2 cut(s)	1430, 2480
Eco88I	CYCGRG	1 cut(s)	2031
EcoNI	CCTNNNNNAGG	1 cut(s)	1604
EcoO109I	RGGNCCY	1 cut(s)	8
EcoRI	GAATTC	1 cut(s)	721
EcoRII	CCWGG	4 cut(s)	10, 435, 513, 852
EcoRV	GATATC	1 cut(s)	973
EcoT14I	CCWWGG	3 cut(s)	1218, 1374, 1470
EcoT22I	ATGCAT	1 cut(s)	1836
EcoT38I	GRGCYC	1 cut(s)	162
ErhI	CCWWGG	3 cut(s)	1218, 1374, 1470
FalI	AAGNNNNNCTT	4 cut(s)	293, 325, 944, 976
FaqI	GGGAC	2 cut(s)	334, 1451
FauNDI	CATATG	1 cut(s)	747
FblI	GTMKAC	1 cut(s)	1294
FokI	GGATG	7 cut(s)	419, 1337, 1431, 1793, 1822, 2299, 2351
FriOI	GRGCYC	1 cut(s)	162
FspBI	CTAG	6 cut(s)	155, 237, 357, 395, 534, 1622
GlaI	GCGC	2 cut(s)	153, 485
GsuI	CTGGAG	2 cut(s)	2075, 2314
HaeIII	GGCC	6 cut(s)	331, 450, 1197, 1264, 1610, 2344
HapII	CCGG	3 cut(s)	31, 328, 1146
HgaI	GACGC	2 cut(s)	154, 1738
HhaI	GCGC	2 cut(s)	154, 486
Hin6I	GCGC	2 cut(s)	152, 484
HinP1I	GCGC	2 cut(s)	152, 484
HincII	GTYRAC	3 cut(s)	511, 1058, 1295
HindII	GTYRAC	3 cut(s)	511, 1058, 1295
HindIII	AAGCTT	1 cut(s)	2526
HpaII	CCGG	3 cut(s)	31, 328, 1146
HphI	GGTGA	2 cut(s)	707, 1760
Hpy166II	GTNNAC	9 cut(s)	401, 468, 511, 644, 1058, 1295, 1566, 2190, 2477
Hpy8I	GTNNAC	9 cut(s)	401, 468, 511, 644, 1058, 1295, 1566, 2190, 2477
Hpy99I	CGWCG	6 cut(s)	68, 71, 87, 140, 170, 173
HpyAV	CCTTC	7 cut(s)	58, 184, 970, 1309, 1322, 2112, 2119
HpyCH4III	ACNGT	4 cut(s)	691, 1656, 1891, 2445
HpyCH4IV	ACGT	7 cut(s)	69, 135, 323, 713, 1429, 1786, 2479
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1151, 1270, 1949
HpySE526I	ACGT	7 cut(s)	69, 135, 323, 713, 1429, 1786, 2479
HspAI	GCGC	2 cut(s)	152, 484
Kpn2I	TCCGGA	1 cut(s)	30
LmnI	GCTCC	7 cut(s)	33, 258, 265, 523, 1445, 1949, 2266
Lsp1109I	GCAGC	7 cut(s)	756, 778, 907, 1041, 1141, 1558, 1832
LweI	GCATC	7 cut(s)	743, 781, 1188, 1793, 1800, 1917, 2248
MaeI	CTAG	6 cut(s)	155, 237, 357, 395, 534, 1622
MaeII	ACGT	7 cut(s)	69, 135, 323, 713, 1429, 1786, 2479
MaeIII	GTNAC	3 cut(s)	244, 1527, 1787
MbiI	CCGCTC	1 cut(s)	253
MflI	RGATCY	4 cut(s)	942, 1399, 1795, 2161
MhlI	GDGCHC	5 cut(s)	162, 300, 646, 1392, 2479
MlsI	TGGCCA	1 cut(s)	1197
MluNI	TGGCCA	1 cut(s)	1197
MlyI	GAGTC	4 cut(s)	48, 249, 355, 899
MmeI	TCCRAC	2 cut(s)	2051, 2474
Mox20I	TGGCCA	1 cut(s)	1197
Mph1103I	ATGCAT	1 cut(s)	1836
MroI	TCCGGA	1 cut(s)	30
MroXI	GAANNNNTTC	3 cut(s)	1332, 1539, 1983
MscI	TGGCCA	1 cut(s)	1197
MseI	TTAA	8 cut(s)	594, 885, 980, 1107, 1550, 1893, 2042, 2513
MslI	CAYNNNNRTG	1 cut(s)	1773
Msp20I	TGGCCA	1 cut(s)	1197
MspA1I	CMGCKG	5 cut(s)	769, 1571, 1823, 2132, 2158
MspI	CCGG	3 cut(s)	31, 328, 1146
MspR9I	CCNGG	4 cut(s)	12, 437, 515, 854
Mva1269I	GAATGC	1 cut(s)	1834
MvaI	CCWGG	4 cut(s)	12, 437, 515, 854
MvnI	CGCG	2 cut(s)	152, 1711
MwoI	GCNNNNNNNGC	3 cut(s)	1151, 1270, 1949
NdeI	CATATG	1 cut(s)	747
NlaIV	GGNNCC	4 cut(s)	35, 1675, 2079, 2277
NmeAIII	GCCGAG	2 cut(s)	62, 926
NmuCI	GTSAC	2 cut(s)	244, 1787
NsiI	ATGCAT	1 cut(s)	1836
NspI	RCATGY	1 cut(s)	1834
OliI	CACNNNNGTG	1 cut(s)	1773
PaeI	GCATGC	1 cut(s)	1834
PaeR7I	CTCGAG	1 cut(s)	2031
PagI	TCATGA	1 cut(s)	475
PceI	AGGCCT	1 cut(s)	1610
PcsI	WCGNNNNNNNCGW	1 cut(s)	103
PctI	GAATGC	1 cut(s)	1834
PdmI	GAANNNNTTC	3 cut(s)	1332, 1539, 1983
PflFI	GACNNNGTC	1 cut(s)	1732
PflMI	CCANNNNNTGG	2 cut(s)	520, 1499
PfoI	TCCNGGA	1 cut(s)	852
PleI	GAGTC	4 cut(s)	47, 248, 355, 899
PmaCI	CACGTG	2 cut(s)	1430, 2480
PmlI	CACGTG	2 cut(s)	1430, 2480
PpsI	GAGTC	4 cut(s)	47, 248, 355, 899
Ppu21I	YACGTR	2 cut(s)	1430, 2480
PpuMI	RGGWCCY	1 cut(s)	8
PshBI	ATTAAT	1 cut(s)	980
Psp5II	RGGWCCY	1 cut(s)	8
Psp6I	CCWGG	4 cut(s)	10, 435, 513, 852
PspCI	CACGTG	2 cut(s)	1430, 2480
PspGI	CCWGG	4 cut(s)	10, 435, 513, 852
PspN4I	GGNNCC	4 cut(s)	35, 1675, 2079, 2277
PspPI	GGNCC	4 cut(s)	8, 274, 2276, 2342
PspPPI	RGGWCCY	1 cut(s)	8
PsrI	GAACNNNNNNTAC	2 cut(s)	2282, 2314
PstNI	CAGNNNCTG	2 cut(s)	11, 1732
PsuI	RGATCY	4 cut(s)	942, 1399, 1795, 2161
PsyI	GACNNNGTC	1 cut(s)	1732
PvuII	CAGCTG	4 cut(s)	769, 1823, 2132, 2158
RsaI	GTAC	6 cut(s)	326, 402, 600, 1014, 1042, 2052
RsaNI	GTAC	6 cut(s)	325, 401, 599, 1013, 1041, 2051
RseI	CAYNNNNRTG	1 cut(s)	1773
SalI	GTCGAC	1 cut(s)	1293
SaqAI	TTAA	8 cut(s)	594, 885, 980, 1107, 1550, 1893, 2042, 2513
Sau96I	GGNCC	4 cut(s)	8, 274, 2276, 2342
ScaI	AGTACT	1 cut(s)	2052
SchI	GAGTC	4 cut(s)	48, 249, 355, 899
ScrFI	CCNGG	4 cut(s)	12, 437, 515, 854
SduI	GDGCHC	5 cut(s)	162, 300, 646, 1392, 2479
SfaNI	GCATC	7 cut(s)	743, 781, 1188, 1793, 1800, 1917, 2248
SfcI	CTRYAG	1 cut(s)	690
Sfr274I	CTCGAG	1 cut(s)	2031
SinI	GGWCC	3 cut(s)	8, 274, 2276
SlaI	CTCGAG	1 cut(s)	2031
SmiMI	CAYNNNNRTG	1 cut(s)	1773
SmlI	CTYRAG	2 cut(s)	222, 2031
SmoI	CTYRAG	2 cut(s)	222, 2031
SpeI	ACTAGT	1 cut(s)	533
SphI	GCATGC	1 cut(s)	1834
SseBI	AGGCCT	1 cut(s)	1610
SsiI	CCGC	9 cut(s)	79, 100, 251, 968, 1354, 1508, 1569, 1711, 2176
SspI	AATATT	1 cut(s)	1411
SspMI	CTAG	6 cut(s)	155, 237, 357, 395, 534, 1622
StuI	AGGCCT	1 cut(s)	1610
StyD4I	CCNGG	4 cut(s)	10, 435, 513, 852
StyI	CCWWGG	3 cut(s)	1218, 1374, 1470
TaaI	ACNGT	4 cut(s)	691, 1656, 1891, 2445
TaiI	ACGT	7 cut(s)	72, 138, 326, 716, 1432, 1789, 2482
TaqI	TCGA	7 cut(s)	119, 138, 589, 889, 1294, 2032, 2228
TaqII	GACCGA	1 cut(s)	357
TatI	WGTACW	4 cut(s)	400, 598, 1012, 2050
TauI	GCSGC	3 cut(s)	102, 253, 1714
Tru1I	TTAA	8 cut(s)	594, 885, 980, 1107, 1550, 1893, 2042, 2513
Tru9I	TTAA	8 cut(s)	594, 885, 980, 1107, 1550, 1893, 2042, 2513
TscAI	CASTG	2 cut(s)	1397, 1643
TseFI	GTSAC	2 cut(s)	244, 1787
TseI	GCWGC	7 cut(s)	766, 769, 895, 1029, 1154, 1571, 1820
Tsp45I	GTSAC	2 cut(s)	244, 1787
TspGWI	ACGGA	2 cut(s)	507, 2207
TspRI	CASTG	2 cut(s)	1397, 1643
Tth111I	GACNNNGTC	1 cut(s)	1732
Van91I	CCANNNNNTGG	2 cut(s)	520, 1499
VneI	GTGCAC	2 cut(s)	642, 2475
VpaK11BI	GGWCC	3 cut(s)	8, 274, 2276
VspI	ATTAAT	1 cut(s)	980
XagI	CCTNNNNNAGG	1 cut(s)	1604
XapI	RAATTY	5 cut(s)	721, 798, 881, 1437, 1914
XceI	RCATGY	1 cut(s)	1834
XcmI	CCANNNNNNNNNTGG	4 cut(s)	443, 860, 2071, 2136
XhoI	CTCGAG	1 cut(s)	2031
XmiI	GTMKAC	1 cut(s)	1294
XmnI	GAANNNNTTC	3 cut(s)	1332, 1539, 1983
XspI	CTAG	6 cut(s)	155, 237, 357, 395, 534, 1622
ZrmI	AGTACT	1 cut(s)	2052
Zsp2I	ATGCAT	1 cut(s)	1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.