Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0010217

Physical Location & Seq

Genomic Coordinates Reverse (-)

53821477 .. 53829356

Gene Structure 7880 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00372380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2562 bp

ATGTCTGGAACCGGAAAACGAAGCACTAGTAGTCGGAGCCGAGTCAAACCGTCCAAGCATGCCAACGACGACGAAGACGACGGCGTTTCACTCCGCCGTCGTAGTAGGCCCAATCTCCGCCGCCGAAACGACAGCTCGATCAGAATCTTCAACGTCGATCTCAAAATCGTGCTAGGGCTCAGCGTCGTGGCCTTCTTTGTCATTTTGATTTTCATCTATAACCTCATAAACCATGTCGCACAGCCTCAGATACCTAGGGTCGTCACGCCATTCCCTGCTCCGAAGCTCATGGACCTCCCTCAGTTTCAAGGTGAGCATAAGGAGAACTTGTATTGGGGAACGTATCGGCCTCATGCTTATCTCGGAATCCGAGCTAGGACTCCTCGGTCTTTGATTGCTGGATTAATGTGGCTAGGTATACAGGATGGGAGATATTCCCTGCGGCATTTTTGCCAAGATTCTGATGGTCTGGCCCAATATGGTTGGACAGATCATGATGGGCGCACTTATGGACATCAAGTCATTGTTGACCAGGAAATGAAGTTGGCCACTAGTTTCTTGAAATCAAAGGGGGAAGACAGTGGTTACGGGGGAGACTGGGCAGTTCGACTTGATGTACAAAACCACAAATCTAACGGCAATGATGAACTTTTGAGAAGTGCACATCTCTTTTTCTATTTGGCTGATGAAGAGGGAAATGCTCTAACTGTAGGAGAAGACACATTGGGAACTTCTGAGAATTCCCTCCTTGCATCTGGTTCTCGTATGGACGTTGGAAGTTGGCAGCTGCATCTAAAATCAGAAGATGATTTGGAAGTTCATTATTCTGGTTTTAAGACGCCTCATATTCACAACTTATCTGATCTTGTCCAGGAAAATCTTGGACTACAAGTAAGGAAATTTAATCGACTGCAGCTACCTGACTCATCTGAAGATTATCCAAGTATTCTGGTTTTTCAGATTTCCGGTAAGATTCCTTTCAAGGTGGATATCACATTTGTATCTGGAACTGGTTTGGAAAGTTCAAGAGTAGAGAAACGTGTCAGCAGCCTTACAGGTACTTCACTAACCAGCCAACTGAAAGGGAAGCAAAGAGAATTTGACTCGAAGTTTGAGAAGACCTTTAACCTAACTGACAAGCAGGTTGATCCTGAATCTATTATTGCTGGTAAGGCTGCTATTGGAAACTTGTTGGGTGGCATCGGCTATTTCTTTGGCCAGTCAAAAATTGCCCTCCCTAAGGATGTGAATCTGGCAAGTCAGGATAATTCTATTTTATATTGGCCTGCCGAGCTTTACACAGCTGTTCCAAGTCGACCTTTCTTTCCAAGGGGATTTTTGTGGGATGAAGGCTTTCATCAGCTTTTGATCTGGCGTTGGGATACACGCATTTCCTTGGACATCTTAGGACACTGGTTAGATCTGATGAATATTGATGGATGGATTCCACGTGAGCAAATTTTAGGTGCCGAAGCTCTCAGTAAAGTCCCCAAGGAATTTGTTGCTCAGCTTCCATCAAATGGAAATCCACCAACTCTATTTTTAGTATTACGTGAACTACTTCATGGTTTAAAGAAAAATCAGTTTACTGCTCCTGAAAGCAATGAGATCTCTTCATTCCTAAAACAGGCTTTTGTTCGCCTAGAAGCATGGTTTCAGTGGTTCAACACTACCCAGTCAGGAAAAGAAATTGGCGCCTACTACTGGCATGGAAGAGACCATACAACAACGCGGCAACTAAATCCGCAGACACTGTCTTCTGGGTTTGATGATTATCCTCGTGCTTCTCACCCAAGTGAGGATGAACGTCATGTAGATCTTAGATGCTGGATGCTTCTTGCAGCAGATTGCTTGCATTCCATTTTGAAGCTTTTCGAGGAGGATAACAAATTTGGAAAGGAGTATGATACTACAGTTAAGATGCTCTCGGATTTTGAAATTCTGAATCAGATGCATTATGACGATGCGTATGGAGCTTACTTTGATTTTGGGAATCATACAGAAAAGGTTCGTTTAAGGTGGAAGGAAATGATGGTGGGACACAACTATCCAACTCGAGAGCTTTTACGGGAAGTATTGGAAACTCCCAAGCTGAGACTGGTTCCTCACATTGGCTATGTTAGTCTTTTCCCCTTCATGGGAAGGATTATTCCAGCTGATTCGTGGATTCTGGAGAAACAGCTAGATCTTATATCAAACCGGAGTATCTTGTGGACAGATTTTGGACTGCGTTCTCTTGCAAAAACAAGCTCCATCTATATGAAACATAACACAGAGCATGACGCTCCTTATTGGAGGGGTCCAATATGGATGAACATGAATTACATGATTCTTTCATCACTCTATCATTACTCCACAGAGGATGGGCCATATAGAGAAAAGGCAAGAACCATCTATGATGACTTGAGAGGCAATTTGATTAGAAATGTGGTTCGGAATTACCACAAAACTGGGTTCTTCTGGGAACAGTTTGATCAGAGAAATGGCAAGGGTAAAGGTGCACGCGTATTTACTGGTTGGACATCTCTTGTCTTGTTAATCATGGCAGAAGCTTACCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004573 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016787 GO:0016798 GO:0019538 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0070085 GO:0071704 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

Glyco_hydro_63 Glyco_hydro_63N

Protein Analysis

853

Amino Acids

97.92

Weight (kDa)

6.88

Isoelectric Point (pI)

46.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_63N	PF16923	110 - 272	4.1e-41	Glycosyl hydrolase family 63 N-terminal domain
Glyco_hydro_63	PF03200	352 - 850	8.2e-222	Glycosyl hydrolase family 63 C-terminal domain
MGH1-like_GH	PF22422	526 - 838	9.8e-16	Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010217)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67490 AT1G67490
fragaria_vesca	FvH4_4g23960 FvH4_4g23960
malus_domestica	MD13G1116700.v1.1 MD16G1117400.v1.1
prunus_persica	Prupe.1G228800_v2.0.a1
pyrus_communis	pycom13g10130 pycom16g10060
rosa_chinensis	RchiOBHm_Chr4g0430631
rosa_laevigata	RLG00000006961
rosa_multiflora	Rmu_sc0000131.1_g000015 Rmu_sc0005117.1_g000005 Rmu_sc0006863.1_g000002
rosa_roxburghii	Rroxscaffold_5G00372380
rosa_rugosa	Rorug04G0244900
rosa_samantha	Rh4AG300900 Rh4BG308000 Rh4CG325100 Rh4DG305600
rosa_wichuraiana	Rw4G026110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	385
Acc36I	ACCTGC	1 cut(s)	1132
AccB1I	GGYRCC	2 cut(s)	1466, 1694
AccB7I	CCANNNNNTGG	1 cut(s)	1520
AccI	GTMKAC	2 cut(s)	418, 1315
AccII	CGCG	2 cut(s)	1732, 2505
AciI	CCGC	6 cut(s)	94, 118, 121, 442, 1732, 1745
AclWI	GGATC	1 cut(s)	1142
AcoI	YGGCCR	2 cut(s)	546, 1216
AcsI	RAATTY	7 cut(s)	739, 899, 1097, 1458, 1496, 1889, 1938
AcuI	CTGAAG	1 cut(s)	951
AcvI	CACGTG	1 cut(s)	1451
AcyI	GRCGYC	2 cut(s)	839, 1695
AfaI	GTAC	2 cut(s)	618, 1060
AfiI	CCNNNNNNNGG	8 cut(s)	1240, 1520, 1627, 1704, 1798, 2111, 2137, 2138
AflIII	ACRYGT	2 cut(s)	1039, 2503
AgsI	TTSAA	8 cut(s)	151, 308, 562, 982, 1026, 1666, 1867, 1937
AhdI	GACNNNNNGTC	1 cut(s)	518
AhlI	ACTAGT	2 cut(s)	26, 551
AjnI	CCWGG	2 cut(s)	531, 870
AleI	CACNNNNGTG	1 cut(s)	1794
Alw21I	GWGCWC	2 cut(s)	664, 2503
Alw26I	GTCTC	3 cut(s)	588, 1710, 2089
Alw44I	GTGCAC	2 cut(s)	660, 2499
AlwI	GGATC	1 cut(s)	1142
AlwNI	CAGNNNCTG	1 cut(s)	1753
Ama87I	CYCGRG	1 cut(s)	2055
AoxI	GGCC	8 cut(s)	107, 189, 347, 471, 546, 1216, 1283, 2366
ApaLI	GTGCAC	2 cut(s)	660, 2499
ApeKI	GCWGC	6 cut(s)	784, 787, 913, 1047, 1175, 1841
ApoI	RAATTY	7 cut(s)	739, 899, 1097, 1458, 1496, 1889, 1938
ArsI	GACNNNNNNTTYG	2 cut(s)	1094, 1126
AseI	ATTAAT	1 cut(s)	404
Asp700I	GAANNNNTTC	4 cut(s)	1353, 1560, 1871, 2007
AspA2I	CCTAGG	1 cut(s)	254
AspLEI	GCGC	2 cut(s)	504, 1697
AspS9I	GGNCC	5 cut(s)	108, 292, 472, 2300, 2366
AsuHPI	GGTGA	2 cut(s)	323, 1781
AvaI	CYCGRG	1 cut(s)	2055
AvaII	GGWCC	2 cut(s)	292, 2300
AvrII	CCTAGG	1 cut(s)	254
AxyI	CCTNAGG	1 cut(s)	1239
BaeGI	GKGCMC	2 cut(s)	664, 2503
BaeI	ACNNNNGTAYC	6 cut(s)	984, 1017, 1899, 1932, 2188, 2221
BalI	TGGCCA	2 cut(s)	548, 1218
BanI	GGYRCC	2 cut(s)	1466, 1694
BanII	GRGCYC	1 cut(s)	180
BarI	GAAGNNNNNNTAC	2 cut(s)	1705, 1737
BauI	CACGAG	1 cut(s)	1779
BbrPI	CACGTG	1 cut(s)	1451
BbsI	GAAGAC	5 cut(s)	81, 582, 723, 1124, 1749
Bbv12I	GWGCWC	2 cut(s)	664, 2503
BbvI	GCAGC	6 cut(s)	774, 796, 925, 1059, 1162, 1853
BceAI	ACGGC	3 cut(s)	81, 97, 652
BciT130I	CCWGG	2 cut(s)	533, 872
BciVI	GTATCC	1 cut(s)	1375
BclI	TGATCA	1 cut(s)	2473
BcoDI	GTCTC	3 cut(s)	588, 1710, 2089
BcuI	ACTAGT	2 cut(s)	26, 551
BfaI	CTAG	8 cut(s)	27, 173, 255, 375, 413, 552, 1643, 2183
BfmI	CTRYAG	3 cut(s)	708, 911, 1911
BfoI	RGCGCY	1 cut(s)	1698
BfuAI	ACCTGC	1 cut(s)	1132
BfuI	GTATCC	1 cut(s)	1375
BglII	AGATCT	4 cut(s)	1420, 1608, 1816, 2185
BisI	GCNGC	9 cut(s)	121, 443, 785, 788, 914, 1048, 1176, 1733, 1842
BlnI	CCTAGG	1 cut(s)	254
BlpI	GCTNAGC	2 cut(s)	179, 1506
BlsI	GCNGC	9 cut(s)	122, 444, 786, 789, 915, 1049, 1177, 1734, 1843
Bme1390I	CCNGG	2 cut(s)	533, 872
Bme18I	GGWCC	2 cut(s)	292, 2300
BmeRI	GACNNNNNGTC	1 cut(s)	518
BmeT110I	CYCGRG	1 cut(s)	2055
BmgT120I	GGNCC	5 cut(s)	108, 292, 472, 2300, 2366
BmiI	GGNNCC	6 cut(s)	10, 38, 1468, 1696, 2103, 2301
BmrFI	CCNGG	2 cut(s)	533, 872
BmrI	ACTGGG	3 cut(s)	607, 1669, 2460
BmsI	GCATC	8 cut(s)	761, 799, 1209, 1814, 1821, 1911, 1941, 1954
BmuI	ACTGGG	3 cut(s)	607, 1669, 2460
BpiI	GAAGAC	5 cut(s)	81, 582, 723, 1124, 1749
BpmI	CTGGAG	1 cut(s)	2192
Bpu1102I	GCTNAGC	2 cut(s)	179, 1506
BpuEI	CTTGAG	1 cut(s)	2425
BsaAI	YACGTR	2 cut(s)	1451, 1553
BsaBI	GATNNNNATC	4 cut(s)	143, 212, 1248, 1773
BsaHI	GRCGYC	2 cut(s)	839, 1695
BsaI	GGTCTC	1 cut(s)	1710
BsaJI	CCNNGG	5 cut(s)	254, 383, 1328, 1395, 1491
BsaWI	WCCGGW	3 cut(s)	11, 965, 2199
BsaXI	ACNNNNNCTCC	2 cut(s)	314, 344
Bsc4I	CCNNNNNNNGG	8 cut(s)	1240, 1520, 1627, 1704, 1798, 2111, 2137, 2138
Bse1I	ACTGG	9 cut(s)	602, 1015, 1219, 1418, 1675, 1709, 2103, 2455, 2518
Bse21I	CCTNAGG	1 cut(s)	1239
Bse3DI	GCAATG	2 cut(s)	646, 1609
Bse8I	GATNNNNATC	4 cut(s)	143, 212, 1248, 1773
BseBI	CCWGG	2 cut(s)	533, 872
BseDI	CCNNGG	5 cut(s)	254, 383, 1328, 1395, 1491
BseGI	GGATG	8 cut(s)	430, 1249, 1351, 1445, 1807, 1836, 2316, 2368
BseJI	GATNNNNATC	4 cut(s)	143, 212, 1248, 1773
BseLI	CCNNNNNNNGG	8 cut(s)	1240, 1520, 1627, 1704, 1798, 2111, 2137, 2138
BseMI	GCAATG	2 cut(s)	646, 1609
BseMII	CTCAG	7 cut(s)	193, 260, 314, 726, 1492, 1520, 2084
BseNI	ACTGG	9 cut(s)	602, 1015, 1219, 1418, 1675, 1709, 2103, 2455, 2518
BseRI	GAGGAG	2 cut(s)	372, 1892
BseSI	GKGCMC	2 cut(s)	664, 2503
BseXI	GCAGC	6 cut(s)	774, 796, 925, 1059, 1162, 1853
Bsh1236I	CGCG	2 cut(s)	1732, 2505
BshFI	GGCC	8 cut(s)	109, 191, 349, 473, 548, 1218, 1285, 2368
BshNI	GGYRCC	2 cut(s)	1466, 1694
BsiHKAI	GWGCWC	2 cut(s)	664, 2503
BsiHKCI	CYCGRG	1 cut(s)	2055
BsiSI	CCGG	3 cut(s)	12, 966, 2200
BslFI	GGGAC	2 cut(s)	1472, 2052
BslI	CCNNNNNNNGG	8 cut(s)	1240, 1520, 1627, 1704, 1798, 2111, 2137, 2138
BsmAI	GTCTC	3 cut(s)	588, 1710, 2089
BsmFI	GGGAC	2 cut(s)	1472, 2052
BsmI	GAATGC	1 cut(s)	1855
BsnI	GGCC	8 cut(s)	109, 191, 349, 473, 548, 1218, 1285, 2368
Bso31I	GGTCTC	1 cut(s)	1710
BsoBI	CYCGRG	1 cut(s)	2055
Bsp1286I	GDGCHC	3 cut(s)	180, 664, 2503
Bsp1407I	TGTACA	1 cut(s)	616
Bsp1720I	GCTNAGC	2 cut(s)	179, 1506
BspACI	CCGC	6 cut(s)	94, 118, 121, 442, 1732, 1745
BspANI	GGCC	8 cut(s)	109, 191, 349, 473, 548, 1218, 1285, 2368
BspCNI	CTCAG	7 cut(s)	192, 259, 313, 727, 1491, 1519, 2085
BspFNI	CGCG	2 cut(s)	1732, 2505
BspHI	TCATGA	1 cut(s)	493
BspLI	GGNNCC	6 cut(s)	10, 38, 1468, 1696, 2103, 2301
BspMAI	CTGCAG	1 cut(s)	915
BspMI	ACCTGC	1 cut(s)	1132
BspPI	GGATC	1 cut(s)	1142
BspT107I	GGYRCC	2 cut(s)	1466, 1694
BspTNI	GGTCTC	1 cut(s)	1710
BsrDI	GCAATG	2 cut(s)	646, 1609
BsrGI	TGTACA	1 cut(s)	616
BsrI	ACTGG	9 cut(s)	602, 1015, 1219, 1418, 1675, 1709, 2103, 2455, 2518
BssECI	CCNNGG	5 cut(s)	254, 383, 1328, 1395, 1491
BssNAI	GTATAC	1 cut(s)	419
BssNI	GRCGYC	2 cut(s)	839, 1695
BssSI	CACGAG	1 cut(s)	1779
BssT1I	CCWWGG	4 cut(s)	254, 1328, 1395, 1491
Bst1107I	GTATAC	1 cut(s)	419
Bst2BI	CACGAG	1 cut(s)	1779
Bst2UI	CCWGG	2 cut(s)	533, 872
Bst4CI	ACNGT	6 cut(s)	51, 581, 709, 1755, 1915, 2469
Bst6I	CTCTTC	3 cut(s)	684, 1618, 1708
BstACI	GRCGYC	2 cut(s)	839, 1695
BstAUI	TGTACA	1 cut(s)	616
BstBAI	YACGTR	2 cut(s)	1451, 1553
BstC8I	GCNNGC	4 cut(s)	60, 1287, 1853, 2503
BstENI	CCTNNNNNAGG	2 cut(s)	1238, 1625
BstF5I	GGATG	8 cut(s)	430, 1249, 1351, 1445, 1807, 1836, 2316, 2368
BstFNI	CGCG	2 cut(s)	1732, 2505
BstH2I	RGCGCY	1 cut(s)	1698
BstHHI	GCGC	2 cut(s)	504, 1697
BstMAI	GTCTC	3 cut(s)	588, 1710, 2089
BstMWI	GCNNNNNNNGC	3 cut(s)	1172, 1291, 1973
BstNI	CCWGG	2 cut(s)	533, 872
BstNSI	RCATGY	1 cut(s)	62
BstSCI	CCNGG	2 cut(s)	531, 870
BstSFI	CTRYAG	3 cut(s)	708, 911, 1911
BstSLI	GKGCMC	2 cut(s)	664, 2503
BstUI	CGCG	2 cut(s)	1732, 2505
BstV1I	GCAGC	6 cut(s)	774, 796, 925, 1059, 1162, 1853
BstV2I	GAAGAC	5 cut(s)	81, 582, 723, 1124, 1749
BstX2I	RGATCY	4 cut(s)	1420, 1608, 1816, 2185
BstXI	CCANNNNNNTGG	1 cut(s)	2450
BstYI	RGATCY	4 cut(s)	1420, 1608, 1816, 2185
BstZ17I	GTATAC	1 cut(s)	419
Bsu36I	CCTNAGG	1 cut(s)	1239
BsuI	GTATCC	1 cut(s)	1375
BsuRI	GGCC	8 cut(s)	109, 191, 349, 473, 548, 1218, 1285, 2368
BtsCI	GGATG	8 cut(s)	430, 1249, 1351, 1445, 1807, 1836, 2316, 2368
BtsIMutI	CAGTG	4 cut(s)	586, 1411, 1664, 1751
BveI	ACCTGC	1 cut(s)	1132
Cac8I	GCNNGC	4 cut(s)	60, 1287, 1853, 2503
CaiI	CAGNNNCTG	1 cut(s)	1753
CciI	TCATGA	1 cut(s)	493
CfoI	GCGC	2 cut(s)	504, 1697
Cfr13I	GGNCC	5 cut(s)	108, 292, 472, 2300, 2366
CseI	GACGC	3 cut(s)	172, 847, 2291
Csp6I	GTAC	2 cut(s)	617, 1059
CviQI	GTAC	2 cut(s)	617, 1059
DinI	GGCGCC	1 cut(s)	1696
DraI	TTTAAA	1 cut(s)	1572
DrdI	GACNNNNNNGTC	1 cut(s)	385
DriI	GACNNNNNGTC	1 cut(s)	518
DseDI	GACNNNNNNGTC	1 cut(s)	385
EaeI	YGGCCR	2 cut(s)	546, 1216
Eam1104I	CTCTTC	3 cut(s)	684, 1618, 1708
Eam1105I	GACNNNNNGTC	1 cut(s)	518
EarI	CTCTTC	3 cut(s)	684, 1618, 1708
EciI	GGCGGA	2 cut(s)	83, 107
Eco130I	CCWWGG	4 cut(s)	254, 1328, 1395, 1491
Eco24I	GRGCYC	1 cut(s)	180
Eco31I	GGTCTC	1 cut(s)	1710
Eco32I	GATATC	1 cut(s)	991
Eco47I	GGWCC	2 cut(s)	292, 2300
Eco57I	CTGAAG	1 cut(s)	951
Eco72I	CACGTG	1 cut(s)	1451
Eco81I	CCTNAGG	1 cut(s)	1239
Eco88I	CYCGRG	1 cut(s)	2055
EcoNI	CCTNNNNNAGG	2 cut(s)	1238, 1625
EcoRI	GAATTC	1 cut(s)	739
EcoRII	CCWGG	2 cut(s)	531, 870
EcoRV	GATATC	1 cut(s)	991
EcoT14I	CCWWGG	4 cut(s)	254, 1328, 1395, 1491
EcoT22I	ATGCAT	1 cut(s)	1956
EcoT38I	GRGCYC	1 cut(s)	180
EgeI	GGCGCC	1 cut(s)	1696
EheI	GGCGCC	1 cut(s)	1696
ErhI	CCWWGG	4 cut(s)	254, 1328, 1395, 1491
FalI	AAGNNNNNCTT	4 cut(s)	311, 343, 1303, 1335
FaqI	GGGAC	2 cut(s)	1472, 2052
FbaI	TGATCA	1 cut(s)	2473
FblI	GTMKAC	2 cut(s)	418, 1315
Fnu4HI	GCNGC	9 cut(s)	121, 443, 785, 788, 914, 1048, 1176, 1733, 1842
FokI	GGATG	8 cut(s)	437, 1256, 1358, 1452, 1814, 1843, 2323, 2375
FriOI	GRGCYC	1 cut(s)	180
Fsp4HI	GCNGC	9 cut(s)	121, 443, 785, 788, 914, 1048, 1176, 1733, 1842
FspBI	CTAG	8 cut(s)	27, 173, 255, 375, 413, 552, 1643, 2183
GlaI	GCGC	2 cut(s)	503, 1696
GluI	GCNGC	9 cut(s)	121, 443, 785, 788, 914, 1048, 1176, 1733, 1842
GsuI	CTGGAG	1 cut(s)	2192
HaeII	RGCGCY	1 cut(s)	1698
HaeIII	GGCC	8 cut(s)	109, 191, 349, 473, 548, 1218, 1285, 2368
HapII	CCGG	3 cut(s)	12, 966, 2200
HgaI	GACGC	3 cut(s)	172, 847, 2291
HhaI	GCGC	2 cut(s)	504, 1697
Hin1I	GRCGYC	2 cut(s)	839, 1695
Hin6I	GCGC	2 cut(s)	502, 1695
HinP1I	GCGC	2 cut(s)	502, 1695
HincII	GTYRAC	2 cut(s)	529, 1316
HindII	GTYRAC	2 cut(s)	529, 1316
HindIII	AAGCTT	2 cut(s)	1868, 2550
HpaII	CCGG	3 cut(s)	12, 966, 2200
HphI	GGTGA	2 cut(s)	323, 1781
Hpy166II	GTNNAC	8 cut(s)	419, 529, 662, 1316, 1556, 1587, 2214, 2501
Hpy8I	GTNNAC	8 cut(s)	419, 529, 662, 1316, 1556, 1587, 2214, 2501
Hpy99I	CGWCG	6 cut(s)	71, 74, 83, 102, 158, 188
HpyAV	CCTTC	5 cut(s)	202, 1343, 2017, 2136, 2143
HpyCH4III	ACNGT	6 cut(s)	51, 581, 709, 1755, 1915, 2469
HpyCH4IV	ACGT	7 cut(s)	153, 341, 771, 1039, 1450, 1552, 1807
HpyCH4V	TGCA	9 cut(s)	662, 752, 790, 913, 1841, 1855, 1954, 2240, 2501
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1172, 1291, 1973
HpySE526I	ACGT	7 cut(s)	153, 341, 771, 1039, 1450, 1552, 1807
Hsp92I	GRCGYC	2 cut(s)	839, 1695
HspAI	GCGC	2 cut(s)	502, 1695
KasI	GGCGCC	1 cut(s)	1694
Ksp22I	TGATCA	1 cut(s)	2473
LmnI	GCTCC	6 cut(s)	36, 283, 1597, 1973, 2255, 2290
Lsp1109I	GCAGC	6 cut(s)	774, 796, 925, 1059, 1162, 1853
LweI	GCATC	8 cut(s)	761, 799, 1209, 1814, 1821, 1911, 1941, 1954
MaeI	CTAG	8 cut(s)	27, 173, 255, 375, 413, 552, 1643, 2183
MaeII	ACGT	7 cut(s)	153, 341, 771, 1039, 1450, 1552, 1807
MaeIII	GTNAC	2 cut(s)	262, 584
MflI	RGATCY	4 cut(s)	1420, 1608, 1816, 2185
MhlI	GDGCHC	3 cut(s)	180, 664, 2503
MlsI	TGGCCA	2 cut(s)	548, 1218
MluI	ACGCGT	1 cut(s)	2503
MluNI	TGGCCA	2 cut(s)	548, 1218
Mly113I	GGCGCC	1 cut(s)	1695
MlyI	GAGTC	4 cut(s)	51, 373, 917, 1097
MmeI	TCCRAC	5 cut(s)	14, 464, 754, 2075, 2498
Mox20I	TGGCCA	2 cut(s)	548, 1218
Mph1103I	ATGCAT	1 cut(s)	1956
MroXI	GAANNNNTTC	4 cut(s)	1353, 1560, 1871, 2007
MscI	TGGCCA	2 cut(s)	548, 1218
MseI	TTAA	8 cut(s)	404, 834, 903, 1125, 1571, 1917, 2015, 2537
MslI	CAYNNNNRTG	2 cut(s)	1794, 2258
Msp20I	TGGCCA	2 cut(s)	548, 1218
MspA1I	CMGCKG	3 cut(s)	787, 1304, 2156
MspI	CCGG	3 cut(s)	12, 966, 2200
MspR9I	CCNGG	2 cut(s)	533, 872
Mva1269I	GAATGC	1 cut(s)	1855
MvaI	CCWGG	2 cut(s)	533, 872
MvnI	CGCG	2 cut(s)	1732, 2505
MwoI	GCNNNNNNNGC	3 cut(s)	1172, 1291, 1973
NarI	GGCGCC	1 cut(s)	1695
NlaIV	GGNNCC	6 cut(s)	10, 38, 1468, 1696, 2103, 2301
NmeAIII	GCCGAG	2 cut(s)	65, 1315
NmuCI	GTSAC	1 cut(s)	262
NsiI	ATGCAT	1 cut(s)	1956
NspI	RCATGY	1 cut(s)	62
OliI	CACNNNNGTG	1 cut(s)	1794
PaeI	GCATGC	1 cut(s)	62
PaeR7I	CTCGAG	1 cut(s)	2055
PagI	TCATGA	1 cut(s)	493
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	1855
PdmI	GAANNNNTTC	4 cut(s)	1353, 1560, 1871, 2007
PflFI	GACNNNGTC	1 cut(s)	1753
PflMI	CCANNNNNTGG	1 cut(s)	1520
PfoI	TCCNGGA	1 cut(s)	870
PkrI	GCNGC	9 cut(s)	122, 444, 786, 789, 915, 1049, 1177, 1734, 1843
PleI	GAGTC	4 cut(s)	50, 373, 917, 1097
PluTI	GGCGCC	1 cut(s)	1698
PmaCI	CACGTG	1 cut(s)	1451
PmlI	CACGTG	1 cut(s)	1451
PpsI	GAGTC	4 cut(s)	50, 373, 917, 1097
Ppu21I	YACGTR	2 cut(s)	1451, 1553
PshBI	ATTAAT	1 cut(s)	404
Psp6I	CCWGG	2 cut(s)	531, 870
PspCI	CACGTG	1 cut(s)	1451
PspGI	CCWGG	2 cut(s)	531, 870
PspN4I	GGNNCC	6 cut(s)	10, 38, 1468, 1696, 2103, 2301
PspPI	GGNCC	5 cut(s)	108, 292, 472, 2300, 2366
PsrI	GAACNNNNNNTAC	2 cut(s)	2306, 2338
PstI	CTGCAG	1 cut(s)	915
PstNI	CAGNNNCTG	1 cut(s)	1753
PsuI	RGATCY	4 cut(s)	1420, 1608, 1816, 2185
PsyI	GACNNNGTC	1 cut(s)	1753
PvuII	CAGCTG	3 cut(s)	787, 1304, 2156
RsaI	GTAC	2 cut(s)	618, 1060
RsaNI	GTAC	2 cut(s)	617, 1059
RseI	CAYNNNNRTG	2 cut(s)	1794, 2258
SalI	GTCGAC	1 cut(s)	1314
SaqAI	TTAA	8 cut(s)	404, 834, 903, 1125, 1571, 1917, 2015, 2537
SatI	GCNGC	9 cut(s)	121, 443, 785, 788, 914, 1048, 1176, 1733, 1842
Sau96I	GGNCC	5 cut(s)	108, 292, 472, 2300, 2366
SchI	GAGTC	4 cut(s)	51, 373, 917, 1097
ScrFI	CCNGG	2 cut(s)	533, 872
SduI	GDGCHC	3 cut(s)	180, 664, 2503
SfaNI	GCATC	8 cut(s)	761, 799, 1209, 1814, 1821, 1911, 1941, 1954
SfcI	CTRYAG	3 cut(s)	708, 911, 1911
SfoI	GGCGCC	1 cut(s)	1696
Sfr274I	CTCGAG	1 cut(s)	2055
SinI	GGWCC	2 cut(s)	292, 2300
SlaI	CTCGAG	1 cut(s)	2055
SmiMI	CAYNNNNRTG	2 cut(s)	1794, 2258
SmlI	CTYRAG	2 cut(s)	2055, 2404
SmoI	CTYRAG	2 cut(s)	2055, 2404
SpeI	ACTAGT	2 cut(s)	26, 551
SphI	GCATGC	1 cut(s)	62
SsiI	CCGC	6 cut(s)	94, 118, 121, 442, 1732, 1745
SspDI	GGCGCC	1 cut(s)	1694
SspI	AATATT	1 cut(s)	1432
SspMI	CTAG	8 cut(s)	27, 173, 255, 375, 413, 552, 1643, 2183
StyD4I	CCNGG	2 cut(s)	531, 870
StyI	CCWWGG	4 cut(s)	254, 1328, 1395, 1491
TaaI	ACNGT	6 cut(s)	51, 581, 709, 1755, 1915, 2469
TaiI	ACGT	7 cut(s)	156, 344, 774, 1042, 1453, 1555, 1810
TaqI	TCGA	8 cut(s)	137, 156, 607, 907, 1106, 1315, 1875, 2056
TaqII	GACCGA	1 cut(s)	375
TatI	WGTACW	1 cut(s)	616
TauI	GCSGC	3 cut(s)	123, 445, 1735
Tru1I	TTAA	8 cut(s)	404, 834, 903, 1125, 1571, 1917, 2015, 2537
Tru9I	TTAA	8 cut(s)	404, 834, 903, 1125, 1571, 1917, 2015, 2537
TscAI	CASTG	4 cut(s)	586, 1418, 1664, 1758
TseFI	GTSAC	1 cut(s)	262
TseI	GCWGC	6 cut(s)	784, 787, 913, 1047, 1175, 1841
Tsp45I	GTSAC	1 cut(s)	262
TspRI	CASTG	4 cut(s)	586, 1418, 1664, 1758
Tth111I	GACNNNGTC	1 cut(s)	1753
Van91I	CCANNNNNTGG	1 cut(s)	1520
VneI	GTGCAC	2 cut(s)	660, 2499
VpaK11BI	GGWCC	2 cut(s)	292, 2300
VspI	ATTAAT	1 cut(s)	404
XagI	CCTNNNNNAGG	2 cut(s)	1238, 1625
XapI	RAATTY	7 cut(s)	739, 899, 1097, 1458, 1496, 1889, 1938
XceI	RCATGY	1 cut(s)	62
XcmI	CCANNNNNNNNNTGG	4 cut(s)	461, 878, 2095, 2160
XhoI	CTCGAG	1 cut(s)	2055
XmaJI	CCTAGG	1 cut(s)	254
XmiI	GTMKAC	2 cut(s)	418, 1315
XmnI	GAANNNNTTC	4 cut(s)	1353, 1560, 1871, 2007
XspI	CTAG	8 cut(s)	27, 173, 255, 375, 413, 552, 1643, 2183
Zsp2I	ATGCAT	1 cut(s)	1956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.