FvH4_4g34660

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
32301067 .. 32314015
12949 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g34660.t8

Sequence Viewer

Length: 1608 bp
ATGGCAGCTCGAAGGGTCTCGTCTCTTTTGTCTCGTTCATTCACTTCTGCTTCTTCCTTTTCTAAAGGGAGGTCTTCTGTAAGTAGAGGAATTGGTAAATATAGCACTGCTGCTGCTGCTGCTGTTGAGGACCCAATTACTCCACCTGTCAAAGTAGGTCACACTAAGCTTTTGATCAATGGGCACTTTGTGGATGCAGCATCAGGAAAAACATTTCCCACATTGGACCCTCGGACTGGGGATGTGATCGCTCATGTCGCTGAAGGCGATGCTGAAGATGTAGATCGTGCAGTTGCTGCTGCTAGAAAAGCATTTGATGAAGGACCATGGCCAAAGATGACAGCTTATGAAAGATCTCGGGTCCTTTTCCGCTTTGCTGATCTGATTGAGAAACATAATGATGAACTAGCAGCACTTGAGACATGGGATAATGGGAAGCCATTTGAACAATCTGCTAAAATTGAAATACCAATGGTTGCACGTTTCTTTCGTTACTATGCTGGTTATGCGGATAAGATTCACGGTCTCACCGTTCCAGCTGATGGACCATATCATGTGCAAACCTTGCATGAACCTATAGGTGTTGCAGGTCAGATTATTCCATGGAACTTCCCTCTTGTCATGTTTGCTTGGAAGGTTGCACCTGCTCTAGCATGTGGGAACACTATTGTTCTGAAGACCGCAGAGCAGACACCATTGTCTGCTCTCTATGCTGCACATCTGTTGCATGAGGCCGGACTGCCTCCAGGTGCTCTGAATATGGTTTCTGGCTTTGGTCCAACTGCAGGTGCGGCAATTGCTAGTCATATGGACGTTGATAAGGTTGCTTTTACTGGATCAACTGCTACTGGTAAAATTGTACTTGAACTAGCTGCTAAAAGCAATCTTAAGACAGTAACTTTGGAGCTTGGTGGGAAATCTCCGTTTATTGTATGTGAGGATGCTGATGTAGACAAGGCTGTTGAGTTGGCTCATTTTGCTCTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGTTCTCGTACTTTTGTACATGAACGTGTATATGATGAGTTTGTAGAGAAAGCAACGGCACGTGCCGAGAAACGTGTAGTTGGTGATCCATTCAAGGGGGGCATCGAGCAAGGTCCTCAGATTGATTCAGACCAATTTGAGAAGATCCTGAAGTATATAGATTACGGTATTAAAGGGGGAGCGACACTGGAAACAGGAGGAGAACGATTTGGCTCAAAAGGTTACTACATTAAGCCCACTGTATTCTCAAATGTGAAGGATGACATGCAGATAGCAAAGGATGAGATCTTTGGCCCAGTGCAGACGGTCTTGAAATACAAGGAACTCGATGAGGTGATAAAGAGGGCAAACAATTCGCGCTACGGCCTTGCTGCAGGGGTATTTACACAGAACATAGACACTGCAAACACATTGACACGTGCATTGCGAGTTGGTAGTGTATGGATCAACTGCTTTGATGTGTTTGATGCTTCTATTCCTTTTGGAGGGTACAAGATGAGTGGAAATGGAAGAGAAAAGGGTATTTACGGCCTTCAGAATTACTTGCAAGTCAAGGCTGTGGTCACACCCCTCAAAAATCCGGCATGGCTATAA

Protein Analysis

536

Amino Acids

57.93

Weight (kDa)

7.19

Isoelectric Point (pI)

26.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 63 - 525 2.4e-180 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 652, 776
AasI GACNNNNNNGTC 1 cut(s) 697
Acc36I ACCTGC 3 cut(s) 578, 652, 776
AccB7I CCANNNNNTGG 1 cut(s) 542
AccI GTMKAC 1 cut(s) 951
AccII CGCG 1 cut(s) 1372
AciI CCGC 4 cut(s) 370, 509, 681, 791
AclWI GGATC 4 cut(s) 844, 1094, 1153, 1466
AcoI YGGCCR 1 cut(s) 329
AcuI CTGAAG 5 cut(s) 282, 294, 695, 1184, 1532
AcvI CACGTG 2 cut(s) 1076, 1433
AdeI CACNNNGTG 1 cut(s) 190
AfaI GTAC 4 cut(s) 861, 1024, 1032, 1505
AfiI CCNNNNNNNGG 5 cut(s) 236, 542, 785, 1109, 1499
AflII CTTAAG 1 cut(s) 887
AflIII ACRYGT 3 cut(s) 1039, 1087, 1430
AgsI TTSAA 5 cut(s) 446, 464, 866, 1108, 1327
AjnI CCWGG 1 cut(s) 745
AluBI AGCT 6 cut(s) 8, 169, 344, 539, 872, 907
AluI AGCT 6 cut(s) 8, 169, 344, 539, 872, 907
Alw21I GWGCWC 1 cut(s) 754
Alw26I GTCTC 5 cut(s) 22, 27, 36, 413, 530
AlwI GGATC 4 cut(s) 844, 1094, 1153, 1466
AlwNI CAGNNNCTG 1 cut(s) 296
Ama87I CYCGRG 1 cut(s) 357
AoxI GGCC 5 cut(s) 329, 732, 1306, 1378, 1543
ArsI GACNNNNNNTTYG 2 cut(s) 883, 915
AspLEI GCGC 1 cut(s) 1374
AspS9I GGNCC 8 cut(s) 130, 226, 323, 361, 545, 776, 1127, 1307
AsuHPI GGTGA 3 cut(s) 520, 1109, 1360
AvaI CYCGRG 1 cut(s) 357
AvaII GGWCC 7 cut(s) 130, 226, 323, 361, 545, 776, 1127
BaeGI GKGCMC 1 cut(s) 186
BalI TGGCCA 1 cut(s) 331
BbrPI CACGTG 2 cut(s) 1076, 1433
BbsI GAAGAC 2 cut(s) 66, 683
Bbv12I GWGCWC 1 cut(s) 754
BccI CCATC 1 cut(s) 536
BceAI ACGGC 3 cut(s) 1086, 1393, 1558
BcgI CGANNNNNNTGC 2 cut(s) 1350, 1384
BciT130I CCWGG 1 cut(s) 747
BclI TGATCA 1 cut(s) 174
BcoDI GTCTC 5 cut(s) 22, 27, 36, 413, 530
BfaI CTAG 5 cut(s) 303, 407, 650, 801, 869
BfmI CTRYAG 3 cut(s) 576, 783, 1386
BfrI CTTAAG 1 cut(s) 887
BfuAI ACCTGC 3 cut(s) 578, 652, 776
BglII AGATCT 2 cut(s) 353, 1299
Bme1390I CCNGG 1 cut(s) 747
Bme18I GGWCC 7 cut(s) 130, 226, 323, 361, 545, 776, 1127
BmeT110I CYCGRG 1 cut(s) 357
BmgT120I GGNCC 8 cut(s) 130, 226, 323, 361, 545, 776, 1127, 1307
BmiI GGNNCC 3 cut(s) 132, 228, 362
BmrFI CCNGG 1 cut(s) 747
BmrI ACTGGG 2 cut(s) 246, 1304
BmsI GCATC 6 cut(s) 184, 209, 259, 931, 1125, 1471
BmuI ACTGGG 2 cut(s) 246, 1304
BpiI GAAGAC 2 cut(s) 66, 683
BpmI CTGGAG 1 cut(s) 729
BpuEI CTTGAG 1 cut(s) 437
BsaAI YACGTR 2 cut(s) 1076, 1433
BsaBI GATNNNNATC 1 cut(s) 282
BsaI GGTCTC 2 cut(s) 22, 530
BsaJI CCNNGG 3 cut(s) 230, 326, 602
Bsc4I CCNNNNNNNGG 5 cut(s) 236, 542, 785, 1109, 1499
Bse1I ACTGG 5 cut(s) 241, 838, 853, 1206, 1310
Bse3DI GCAATG 1 cut(s) 1436
Bse8I GATNNNNATC 1 cut(s) 282
BseBI CCWGG 1 cut(s) 747
BseDI CCNNGG 3 cut(s) 230, 326, 602
BseGI GGATG 5 cut(s) 199, 247, 946, 1279, 1300
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 5 cut(s) 236, 542, 785, 1109, 1499
BseMI GCAATG 1 cut(s) 1436
BseMII CTCAG 1 cut(s) 1145
BseNI ACTGG 5 cut(s) 241, 838, 853, 1206, 1310
BseRI GAGGAG 1 cut(s) 1227
BseSI GKGCMC 1 cut(s) 186
BsgI GTGCAG 3 cut(s) 309, 699, 1334
Bsh1236I CGCG 1 cut(s) 1372
BshFI GGCC 5 cut(s) 331, 734, 1308, 1380, 1545
BsiHKAI GWGCWC 1 cut(s) 754
BsiHKCI CYCGRG 1 cut(s) 357
BsiSI CCGG 2 cut(s) 735, 1595
BslFI GGGAC 1 cut(s) 1011
BslI CCNNNNNNNGG 5 cut(s) 236, 542, 785, 1109, 1499
BsmAI GTCTC 5 cut(s) 22, 27, 36, 413, 530
BsmBI CGTCTC 1 cut(s) 27
BsmFI GGGAC 1 cut(s) 1011
BsnI GGCC 5 cut(s) 331, 734, 1308, 1380, 1545
Bso31I GGTCTC 2 cut(s) 22, 530
BsoBI CYCGRG 1 cut(s) 357
Bsp1286I GDGCHC 2 cut(s) 186, 754
Bsp1407I TGTACA 1 cut(s) 1030
Bsp19I CCATGG 2 cut(s) 326, 602
BspACI CCGC 4 cut(s) 370, 509, 681, 791
BspANI GGCC 5 cut(s) 331, 734, 1308, 1380, 1545
BspCNI CTCAG 1 cut(s) 1144
BspFNI CGCG 1 cut(s) 1372
BspLI GGNNCC 3 cut(s) 132, 228, 362
BspMAI CTGCAG 2 cut(s) 787, 1390
BspMI ACCTGC 3 cut(s) 578, 652, 776
BspPI GGATC 4 cut(s) 844, 1094, 1153, 1466
BspTI CTTAAG 1 cut(s) 887
BspTNI GGTCTC 2 cut(s) 22, 530
BsrDI GCAATG 1 cut(s) 1436
BsrGI TGTACA 1 cut(s) 1030
BsrI ACTGG 5 cut(s) 241, 838, 853, 1206, 1310
BssECI CCNNGG 3 cut(s) 230, 326, 602
BssT1I CCWWGG 2 cut(s) 326, 602
Bst2UI CCWGG 1 cut(s) 747
Bst4CI ACNGT 6 cut(s) 524, 532, 895, 1181, 1255, 1321
Bst6I CTCTTC 1 cut(s) 1519
BstAFI CTTAAG 1 cut(s) 887
BstAPI GCANNNNNTGC 2 cut(s) 296, 565
BstAUI TGTACA 1 cut(s) 1030
BstBAI YACGTR 2 cut(s) 1076, 1433
BstDEI CTNAG 2 cut(s) 165, 1131
BstDSI CCRYGG 2 cut(s) 326, 602
BstENI CCTNNNNNAGG 1 cut(s) 1497
BstF5I GGATG 5 cut(s) 199, 247, 946, 1279, 1300
BstFNI CGCG 1 cut(s) 1372
BstHHI GCGC 1 cut(s) 1374
BstMAI GTCTC 5 cut(s) 22, 27, 36, 413, 530
BstNI CCWGG 1 cut(s) 747
BstNSI RCATGY 2 cut(s) 657, 1282
BstSCI CCNGG 1 cut(s) 745
BstSFI CTRYAG 3 cut(s) 576, 783, 1386
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 1 cut(s) 1372
BstV2I GAAGAC 2 cut(s) 66, 683
BstX2I RGATCY 3 cut(s) 353, 1158, 1299
BstYI RGATCY 3 cut(s) 353, 1158, 1299
BsuRI GGCC 5 cut(s) 331, 734, 1308, 1380, 1545
BtgI CCRYGG 2 cut(s) 326, 602
BtgZI GCGATG 1 cut(s) 282
BtsCI GGATG 5 cut(s) 199, 247, 946, 1279, 1300
BtsI GCAGTG 2 cut(s) 105, 1413
BtsIMutI CAGTG 5 cut(s) 105, 1199, 1251, 1317, 1413
BveI ACCTGC 3 cut(s) 578, 652, 776
CaiI CAGNNNCTG 1 cut(s) 296
CfoI GCGC 1 cut(s) 1374
Cfr13I GGNCC 8 cut(s) 130, 226, 323, 361, 545, 776, 1127, 1307
Csp6I GTAC 4 cut(s) 860, 1023, 1031, 1504
CspCI CAANNNNNGTGG 2 cut(s) 1495, 1530
CviQI GTAC 4 cut(s) 860, 1023, 1031, 1504
DdeI CTNAG 2 cut(s) 165, 1131
DraIII CACNNNGTG 1 cut(s) 190
DrdI GACNNNNNNGTC 1 cut(s) 697
DseDI GACNNNNNNGTC 1 cut(s) 697
EaeI YGGCCR 1 cut(s) 329
Eam1104I CTCTTC 1 cut(s) 1519
EarI CTCTTC 1 cut(s) 1519
Eco130I CCWWGG 2 cut(s) 326, 602
Eco31I GGTCTC 2 cut(s) 22, 530
Eco47I GGWCC 7 cut(s) 130, 226, 323, 361, 545, 776, 1127
Eco57I CTGAAG 5 cut(s) 282, 294, 695, 1184, 1532
Eco72I CACGTG 2 cut(s) 1076, 1433
Eco88I CYCGRG 1 cut(s) 357
EcoNI CCTNNNNNAGG 1 cut(s) 1497
EcoO109I RGGNCCY 3 cut(s) 130, 361, 1127
EcoRII CCWGG 1 cut(s) 745
EcoT14I CCWWGG 2 cut(s) 326, 602
ErhI CCWWGG 2 cut(s) 326, 602
Esp3I CGTCTC 1 cut(s) 27
FaqI GGGAC 1 cut(s) 1011
FauNDI CATATG 1 cut(s) 807
FbaI TGATCA 1 cut(s) 174
FblI GTMKAC 1 cut(s) 951
FokI GGATG 5 cut(s) 206, 254, 953, 1286, 1307
FspBI CTAG 5 cut(s) 303, 407, 650, 801, 869
GlaI GCGC 1 cut(s) 1373
GsuI CTGGAG 1 cut(s) 729
HaeIII GGCC 5 cut(s) 331, 734, 1308, 1380, 1545
HapII CCGG 2 cut(s) 735, 1595
HhaI GCGC 1 cut(s) 1374
Hin6I GCGC 1 cut(s) 1372
HinP1I GCGC 1 cut(s) 1372
HindIII AAGCTT 1 cut(s) 167
HinfI GANTC 2 cut(s) 517, 1139
HpaII CCGG 2 cut(s) 735, 1595
HphI GGTGA 3 cut(s) 520, 1109, 1360
Hpy166II GTNNAC 1 cut(s) 952
Hpy188I TCNGA 8 cut(s) 234, 384, 594, 675, 756, 1134, 1144, 1551
Hpy188III TCNNGA 3 cut(s) 204, 1162, 1324
Hpy8I GTNNAC 1 cut(s) 952
HpyAV CCTTC 6 cut(s) 6, 257, 314, 628, 1264, 1556
HpyCH4III ACNGT 6 cut(s) 524, 532, 895, 1181, 1255, 1321
HpyCH4IV ACGT 6 cut(s) 481, 813, 1039, 1075, 1087, 1432
HpyF3I CTNAG 2 cut(s) 165, 1131
HpySE526I ACGT 6 cut(s) 481, 813, 1039, 1075, 1087, 1432
HspAI GCGC 1 cut(s) 1372
Ksp22I TGATCA 1 cut(s) 174
LmnI GCTCC 2 cut(s) 904, 1193
LweI GCATC 6 cut(s) 184, 209, 259, 931, 1125, 1471
MaeI CTAG 5 cut(s) 303, 407, 650, 801, 869
MaeII ACGT 6 cut(s) 481, 813, 1039, 1075, 1087, 1432
MaeIII GTNAC 5 cut(s) 158, 491, 895, 1235, 1576
MboII GAAGA 6 cut(s) 45, 66, 287, 688, 1168, 1536
MfeI CAATTG 1 cut(s) 795
MflI RGATCY 3 cut(s) 353, 1158, 1299
MhlI GDGCHC 2 cut(s) 186, 754
MlsI TGGCCA 1 cut(s) 331
MluCI AATT 8 cut(s) 90, 135, 459, 795, 855, 1148, 1366, 1552
MluNI TGGCCA 1 cut(s) 331
MmeI TCCRAC 1 cut(s) 803
Mox20I TGGCCA 1 cut(s) 331
MscI TGGCCA 1 cut(s) 331
MseI TTAA 4 cut(s) 888, 990, 1185, 1245
MslI CAYNNNNRTG 2 cut(s) 399, 1038
Msp20I TGGCCA 1 cut(s) 331
MspA1I CMGCKG 1 cut(s) 539
MspCI CTTAAG 1 cut(s) 887
MspI CCGG 2 cut(s) 735, 1595
MspR9I CCNGG 1 cut(s) 747
MunI CAATTG 1 cut(s) 795
MvaI CCWGG 1 cut(s) 747
MvnI CGCG 1 cut(s) 1372
NcoI CCATGG 2 cut(s) 326, 602
NdeI CATATG 1 cut(s) 807
NlaIV GGNNCC 3 cut(s) 132, 228, 362
NmeAIII GCCGAG 1 cut(s) 1105
NmuCI GTSAC 2 cut(s) 158, 1576
NspI RCATGY 2 cut(s) 657, 1282
PaqCI CACCTGC 2 cut(s) 652, 776
PcsI WCGNNNNNNNCGW 4 cut(s) 264, 487, 528, 1438
PfeI GAWTC 2 cut(s) 517, 1139
PflMI CCANNNNNTGG 1 cut(s) 542
PmaCI CACGTG 2 cut(s) 1076, 1433
PmlI CACGTG 2 cut(s) 1076, 1433
Ppu21I YACGTR 2 cut(s) 1076, 1433
PpuMI RGGWCCY 3 cut(s) 130, 361, 1127
Psp5II RGGWCCY 3 cut(s) 130, 361, 1127
Psp6I CCWGG 1 cut(s) 745
PspCI CACGTG 2 cut(s) 1076, 1433
PspGI CCWGG 1 cut(s) 745
PspN4I GGNNCC 3 cut(s) 132, 228, 362
PspPI GGNCC 8 cut(s) 130, 226, 323, 361, 545, 776, 1127, 1307
PspPPI RGGWCCY 3 cut(s) 130, 361, 1127
PstI CTGCAG 2 cut(s) 787, 1390
PstNI CAGNNNCTG 1 cut(s) 296
PsuI RGATCY 3 cut(s) 353, 1158, 1299
PvuII CAGCTG 1 cut(s) 539
RsaI GTAC 4 cut(s) 861, 1024, 1032, 1505
RsaNI GTAC 4 cut(s) 860, 1023, 1031, 1504
RseI CAYNNNNRTG 2 cut(s) 399, 1038
SaqAI TTAA 4 cut(s) 888, 990, 1185, 1245
Sau96I GGNCC 8 cut(s) 130, 226, 323, 361, 545, 776, 1127, 1307
ScrFI CCNGG 1 cut(s) 747
SduI GDGCHC 2 cut(s) 186, 754
SfaNI GCATC 6 cut(s) 184, 209, 259, 931, 1125, 1471
SfcI CTRYAG 3 cut(s) 576, 783, 1386
SinI GGWCC 7 cut(s) 130, 226, 323, 361, 545, 776, 1127
SmiMI CAYNNNNRTG 2 cut(s) 399, 1038
SmlI CTYRAG 2 cut(s) 416, 887
SmoI CTYRAG 2 cut(s) 416, 887
Sse9I AATT 8 cut(s) 90, 135, 459, 795, 855, 1148, 1366, 1552
SsiI CCGC 4 cut(s) 370, 509, 681, 791
SspMI CTAG 5 cut(s) 303, 407, 650, 801, 869
StyD4I CCNGG 1 cut(s) 745
StyI CCWWGG 2 cut(s) 326, 602
TaaI ACNGT 6 cut(s) 524, 532, 895, 1181, 1255, 1321
TaiI ACGT 6 cut(s) 484, 816, 1042, 1078, 1090, 1435
TaqI TCGA 3 cut(s) 10, 1119, 1341
TasI AATT 8 cut(s) 90, 135, 459, 795, 855, 1148, 1366, 1552
TatI WGTACW 2 cut(s) 859, 1030
TauI GCSGC 1 cut(s) 794
TfiI GAWTC 2 cut(s) 517, 1139
Tru1I TTAA 4 cut(s) 888, 990, 1185, 1245
Tru9I TTAA 4 cut(s) 888, 990, 1185, 1245
TscAI CASTG 5 cut(s) 112, 1206, 1258, 1317, 1420
TseFI GTSAC 2 cut(s) 158, 1576
Tsp45I GTSAC 2 cut(s) 158, 1576
TspDTI ATGAA 6 cut(s) 27, 333, 363, 417, 585, 1050
TspGWI ACGGA 1 cut(s) 912
TspRI CASTG 5 cut(s) 112, 1206, 1258, 1317, 1420
Van91I CCANNNNNTGG 1 cut(s) 542
Vha464I CTTAAG 1 cut(s) 887
VpaK11BI GGWCC 7 cut(s) 130, 226, 323, 361, 545, 776, 1127
XagI CCTNNNNNAGG 1 cut(s) 1497
XceI RCATGY 2 cut(s) 657, 1282
XmiI GTMKAC 1 cut(s) 951
XspI CTAG 5 cut(s) 303, 407, 650, 801, 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.